BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047375
(496 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 143/296 (48%), Gaps = 25/296 (8%)
Query: 172 FSRMKIFSKSELLKATKNF--HHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEW 229
++K FS EL A+ NF + LG GGFG VYKG L D T VAVK+ + + + E
Sbjct: 22 LGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKR-LKEERXQGGEL 80
Query: 230 EF---LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKS-SQVLKNWKT 285
+F + +IS H+N++++ G C+ LLVY +++NG+++ + ++ SQ +W
Sbjct: 81 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 140
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAM 345
RIA +A + YLH P IIH DVK+ANILLD+ + A V DF L + + +
Sbjct: 141 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF-GLAKLMDYKDXHV 199
Query: 346 STMIRGTVGYLDPEYAHT-----------------ELLTGMNPNSYVALASNEKISMVPY 388
+RGT+G++ PEY T EL+TG LA+++ + ++ +
Sbjct: 200 XXAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 259
Query: 389 FLDSIENNSFRQILNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELD 444
++ +++ C + ERP M EV L+
Sbjct: 260 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 141/296 (47%), Gaps = 25/296 (8%)
Query: 172 FSRMKIFSKSELLKATKNF--HHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEW 229
++K FS EL A+ NF + LG GGFG VYKG L D VAVK+ + + + E
Sbjct: 14 LGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKR-LKEERTQGGEL 72
Query: 230 EF---LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKS-SQVLKNWKT 285
+F + +IS H+N++++ G C+ LLVY +++NG+++ + ++ SQ +W
Sbjct: 73 QFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPK 132
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAM 345
RIA +A + YLH P IIH DVK+ANILLD+ + A V DF L + + +
Sbjct: 133 RQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDF-GLAKLMDYKDXHV 191
Query: 346 STMIRGTVGYLDPEYAHT-----------------ELLTGMNPNSYVALASNEKISMVPY 388
+RG +G++ PEY T EL+TG LA+++ + ++ +
Sbjct: 192 XXAVRGXIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDW 251
Query: 389 FLDSIENNSFRQILNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELD 444
++ +++ C + ERP M EV L+
Sbjct: 252 VKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 144/290 (49%), Gaps = 22/290 (7%)
Query: 182 ELLKATKNFHH--CLGMGGFGSVYKGVLPDNTQVAVKKYMC-ADEIRITEWEFLGIISQV 238
+L +AT NF H +G G FG VYKGVL D +VA+K+ + + + +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 239 KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-NWKTCLRIAAETASAI 297
+H ++V ++G C E +L+Y+++ NG L +++ + +W+ L I A +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLD 357
HYLH+ A IIH DVKS NILLD+N+ K++DF + D+T + +++GT+GY+D
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 358 PEYAHTELLTGMNP---------------NSYVALASNEKISMVPYFLDSIENNSFRQIL 402
PEY LT + ++ V E +++ + ++S N QI+
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 403 NFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
+ KCL + +RP+M +V +L+ RLQE+
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 143/290 (49%), Gaps = 22/290 (7%)
Query: 182 ELLKATKNFHH--CLGMGGFGSVYKGVLPDNTQVAVKKYMC-ADEIRITEWEFLGIISQV 238
+L +AT NF H +G G FG VYKGVL D +VA+K+ + + + +S
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 239 KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-NWKTCLRIAAETASAI 297
+H ++V ++G C E +L+Y+++ NG L +++ + +W+ L I A +
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLD 357
HYLH+ A IIH DVKS NILLD+N+ K++DF + +T + +++GT+GY+D
Sbjct: 153 HYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 358 PEYAHTELLTGMNP---------------NSYVALASNEKISMVPYFLDSIENNSFRQIL 402
PEY LT + ++ V E +++ + ++S N QI+
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIV 269
Query: 403 NFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
+ KCL + +RP+M +V +L+ RLQE+
Sbjct: 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQES 319
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 105/206 (50%), Gaps = 17/206 (8%)
Query: 173 SRMKIFSKSELLKATKNFH--------HCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI 224
+R FS EL T NF + +G GGFG VYKG + +NT VAVKK +I
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 225 RITEW-----EFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQV 279
E + + ++++ +H+N+V++LG + LVY ++ NG+L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 280 LKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISS 339
+W +IA A+ I++LH IH D+KSANILLD+ +TAK+SDF
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 340 DDETAMSTMIRGTVGYLDPEYAHTEL 365
+T M + I GT Y+ PE E+
Sbjct: 186 FAQTVMXSRIVGTTAYMAPEALRGEI 211
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 104/206 (50%), Gaps = 17/206 (8%)
Query: 173 SRMKIFSKSELLKATKNFH--------HCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI 224
+R FS EL T NF + +G GGFG VYKG + +NT VAVKK +I
Sbjct: 10 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 68
Query: 225 RITEW-----EFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQV 279
E + + ++++ +H+N+V++LG + LVY ++ NG+L +
Sbjct: 69 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 128
Query: 280 LKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISS 339
+W +IA A+ I++LH IH D+KSANILLD+ +TAK+SDF
Sbjct: 129 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 340 DDETAMSTMIRGTVGYLDPEYAHTEL 365
+T M I GT Y+ PE E+
Sbjct: 186 FAQTVMXXRIVGTTAYMAPEALRGEI 211
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 103/206 (50%), Gaps = 17/206 (8%)
Query: 173 SRMKIFSKSELLKATKNFH--------HCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI 224
+R FS EL T NF + +G GGFG VYKG + +NT VAVKK +I
Sbjct: 4 TRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 62
Query: 225 RITEW-----EFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQV 279
E + + ++++ +H+N+V++LG + LVY ++ NG+L +
Sbjct: 63 TTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP 122
Query: 280 LKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISS 339
+W +IA A+ I++LH IH D+KSANILLD+ +TAK+SDF
Sbjct: 123 PLSWHMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 179
Query: 340 DDETAMSTMIRGTVGYLDPEYAHTEL 365
+ M I GT Y+ PE E+
Sbjct: 180 FAQXVMXXRIVGTTAYMAPEALRGEI 205
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 99/206 (48%), Gaps = 17/206 (8%)
Query: 173 SRMKIFSKSELLKATKNFH--------HCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI 224
+R FS EL T NF + G GGFG VYKG + +NT VAVKK +I
Sbjct: 1 TRFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDI 59
Query: 225 RITEW-----EFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQV 279
E + + + ++ +H+N+V++LG + LVY + NG+L +
Sbjct: 60 TTEELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP 119
Query: 280 LKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISS 339
+W +IA A+ I++LH IH D+KSANILLD+ +TAK+SDF
Sbjct: 120 PLSWHXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 340 DDETAMSTMIRGTVGYLDPEYAHTEL 365
+ + I GT Y PE E+
Sbjct: 177 FAQXVXXSRIVGTTAYXAPEALRGEI 202
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 178 FSKSELLKATKN---FHHCLGMGGFGSVYKG-VLPDNTQVAVKKYMCADEIRITEW---- 229
F KS L N + +G GGFG V+KG ++ D + VA+K + D TE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 230 -EF---LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKT 285
EF + I+S + H N+VK+ GL +V EFV G L H + DK+ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSV 123
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANIL---LDDN--YTAKVSDFESLVPISSD 340
LR+ + A I Y+ + +P I+H D++S NI LD+N AKV+DF +S
Sbjct: 124 KLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFS----LSQQ 178
Query: 341 DETAMSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPY 388
++S ++ G ++ PE G SY A +M+ Y
Sbjct: 179 SVHSVSGLL-GNFQWMAPE------TIGAEEESYTEKADTYSFAMILY 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 107/228 (46%), Gaps = 33/228 (14%)
Query: 178 FSKSELLKATKN---FHHCLGMGGFGSVYKG-VLPDNTQVAVKKYMCADEIRITEW---- 229
F KS L N + +G GGFG V+KG ++ D + VA+K + D TE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 230 -EF---LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKT 285
EF + I+S + H N+VK+ GL +V EFV G L H + DK+ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSV 123
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANIL---LDDN--YTAKVSDFESLVPISSD 340
LR+ + A I Y+ + +P I+H D++S NI LD+N AKV+DF +S
Sbjct: 124 KLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG----LSQQ 178
Query: 341 DETAMSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPY 388
++S ++ G ++ PE G SY A +M+ Y
Sbjct: 179 SVHSVSGLL-GNFQWMAPE------TIGAEEESYTEKADTYSFAMILY 219
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 87/171 (50%), Gaps = 22/171 (12%)
Query: 178 FSKSELLKATKN---FHHCLGMGGFGSVYKG-VLPDNTQVAVKKYMCADEIRITEW---- 229
F KS L N + +G GGFG V+KG ++ D + VA+K + D TE
Sbjct: 8 FPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKF 67
Query: 230 -EF---LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKT 285
EF + I+S + H N+VK+ GL +V EFV G L H + DK+ + W
Sbjct: 68 QEFQREVFIMSNLNHPNIVKLYGLM--HNPPRMVMEFVPCGDLYHRLLDKAHPI--KWSV 123
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANIL---LDDN--YTAKVSDF 331
LR+ + A I Y+ + +P I+H D++S NI LD+N AKV+DF
Sbjct: 124 KLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCAD--EIRITEW-EFLGIISQVKHKNVVK 245
N +G G FG+V++ + VAVK M D R+ E+ + I+ +++H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+G + +V E++S G+L +H ++ + + L +A + A ++YLH+ +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RN 157
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
P I+H D+KS N+L+D YT KV DF
Sbjct: 158 PPIVHRDLKSPNLLVDKKYTVKVCDF 183
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 63
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 122
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 169
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 6 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 63
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 122
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 123 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 169
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 126
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 173
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 18 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 75
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 134
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 135 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 126
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 64
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 123
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 64
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 123
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 126
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 7 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 64
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 123
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 124 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 170
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 121
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCAD--EIRITEW-EFLGIISQVKHKNVVK 245
N +G G FG+V++ + VAVK M D R+ E+ + I+ +++H N+V
Sbjct: 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVL 98
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+G + +V E++S G+L +H ++ + + L +A + A ++YLH+ +
Sbjct: 99 FMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RN 157
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
P I+H ++KS N+L+D YT KV DF
Sbjct: 158 PPIVHRNLKSPNLLVDKKYTVKVCDF 183
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 126
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 9 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 66
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 125
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 126 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 172
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 121
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIIS 236
K E+ + H LG G FG VY+GV + K + D + + E FL ++
Sbjct: 5 KWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMK 62
Query: 237 QVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +SA
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSA 121
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQIS 121
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQIS 121
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQIS 121
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 5 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 62
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQIS 121
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 168
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 10 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 67
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQIS 126
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 127 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 173
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 85/168 (50%), Gaps = 9/168 (5%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIIS 236
K E+ + H LG G +G VY+GV + K + D + + E FL ++
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMK 62
Query: 237 QVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +SA
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSA 121
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 122 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTA 166
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 266
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 325
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH ++ + N L+ +N+ KV+DF ++ D TA
Sbjct: 326 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 372
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 80/155 (51%), Gaps = 9/155 (5%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIIS 236
K E+ + H LG G +G VY+GV + K + D + + E FL ++
Sbjct: 5 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMK 62
Query: 237 QVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +SA
Sbjct: 63 EIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQISSA 121
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ YL + IH D+ + N L+ +N+ KV+DF
Sbjct: 122 MEYLE---KKNFIHRDLAARNCLVGENHLVKVADF 153
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 87/169 (51%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V+ G + +VA+K E ++E +F+ ++ ++ H +V++ G+C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
LE LV+EF+ +G LS Y+ ++ + L +T L + + + YL S+IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIH 126
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L+ +N KVSDF + DD+ ST + V + PE
Sbjct: 127 RDLAARNCLVGENQVIKVSDF-GMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 308
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + N L +A + +
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEV-NAVVLLYMATQIS 367
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH ++ + N L+ +N+ KV+DF ++ D TA
Sbjct: 368 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 414
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V+ G + +VA+K E ++E +F+ ++ ++ H +V++ G+C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
LE LV+EF+ +G LS Y+ ++ + L +T L + + + YL +IH
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIH 124
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L+ +N KVSDF + DD+ ST + V + PE
Sbjct: 125 RDLAARNCLVGENQVIKVSDF-GMTRFVLDDQYTSSTGTKFPVKWASPE 172
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 26/292 (8%)
Query: 173 SRMKIFSKSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVK---KYMCADEIRITE 228
++++I ++EL + LG G FG+VYKG+ +P+ V + K +
Sbjct: 7 AQLRILKETELKRVK-----VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN 61
Query: 229 WEFLG---IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLK 281
EF+ I++ + H ++V++LG+CL + L V + + +G L Y+H+ SQ+L
Sbjct: 62 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLL 120
Query: 282 NWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDD 341
NW C++IA + YL ++H D+ + N+L+ K++DF + D+
Sbjct: 121 NW--CVQIA----KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 171
Query: 342 ETAMSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQI 401
+ + + + ++ E H T + + E ++ D I +
Sbjct: 172 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 231
Query: 402 LNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENY 453
L KC I RP KE++ E R+ R + Y
Sbjct: 232 LEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRY 283
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V+ G + +VA+K E ++E +F+ ++ ++ H +V++ G+C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
LE LV+EF+ +G LS Y+ ++ + L +T L + + + YL +IH
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 129
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L+ +N KVSDF + DD+ ST + V + PE
Sbjct: 130 RDLAARNCLVGENQVIKVSDF-GMTRFVLDDQYTSSTGTKFPVKWASPE 177
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V+ G + +VA+K E ++E +F+ ++ ++ H +V++ G+C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
LE LV+EF+ +G LS Y+ ++ + L +T L + + + YL +IH
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 126
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L+ +N KVSDF + DD+ ST + V + PE
Sbjct: 127 RDLAARNCLVGENQVIKVSDF-GMTRFVLDDQYTSSTGTKFPVKWASPE 174
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 123/292 (42%), Gaps = 26/292 (8%)
Query: 173 SRMKIFSKSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVK---KYMCADEIRITE 228
++++I ++EL + LG G FG+VYKG+ +P+ V + K +
Sbjct: 30 AQLRILKETELKRVK-----VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKAN 84
Query: 229 WEFLG---IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLK 281
EF+ I++ + H ++V++LG+CL + L V + + +G L Y+H+ SQ+L
Sbjct: 85 VEFMDEALIMASMDHPHLVRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLL 143
Query: 282 NWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDD 341
NW C++IA + YL ++H D+ + N+L+ K++DF + D+
Sbjct: 144 NW--CVQIA----KGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDE 194
Query: 342 ETAMSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQI 401
+ + + + ++ E H T + + E ++ D I +
Sbjct: 195 KEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 254
Query: 402 LNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENY 453
L KC I RP KE++ E R+ R + Y
Sbjct: 255 LEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDPQRY 306
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GI 234
+ K E+ + H LG G +G VY+GV + K + D + + E FL +
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAV 269
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ ++KH N+V++LG+C ++ EF++ G L Y+ + + Q + L +A + +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA-VVLLYMATQIS 328
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
SA+ YL + IH ++ + N L+ +N+ KV+DF ++ D TA
Sbjct: 329 SAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 375
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 86/169 (50%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V+ G + +VA+K E ++E +F+ ++ ++ H +V++ G+C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKT---IKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
LE LV+EF+ +G LS Y+ ++ + L +T L + + + YL +IH
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIH 146
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L+ +N KVSDF + DD+ ST + V + PE
Sbjct: 147 RDLAARNCLVGENQVIKVSDF-GMTRFVLDDQYTSSTGTKFPVKWASPE 194
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 92/188 (48%), Gaps = 32/188 (17%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVK-ILGLCLE 252
+G G +G+VYKG L D VAVK + A+ + + + ++H N+ + I+G +
Sbjct: 21 IGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVG---D 76
Query: 253 TKVT-------LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+VT LLV E+ NG+L Y+ +S +W + R+A + YLH+
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS----DWVSSCRLAHSVTRGLAYLHTELP 132
Query: 306 ------PSIIHSDVKSANILLDDNYTAKVSDF--------ESLVPISSDDETAMSTMIRG 351
P+I H D+ S N+L+ ++ T +SDF LV +D A+S + G
Sbjct: 133 RGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEV--G 190
Query: 352 TVGYLDPE 359
T+ Y+ PE
Sbjct: 191 TIRYMAPE 198
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 183 LLKATKNFH-------HCLGMGGFGSVYKGVLPDNT-----QVAVK--KYMCADEIRITE 228
+LK T H +G G FG VYKG+L ++ VA+K K ++ R+
Sbjct: 34 VLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDF 93
Query: 229 WEFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
GI+ Q H N++++ G+ + K +++ E++ NGAL ++ +K + + L+
Sbjct: 94 LGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEF-----SVLQ 148
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
+ + LA+ + +H D+ + NIL++ N KVSDF L + DD A T
Sbjct: 149 LVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDF-GLSRVLEDDPEATYTT 207
Query: 349 IRGTV 353
G +
Sbjct: 208 SGGKI 212
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 52 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 108
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 109 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 166
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 167 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 196
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 146
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 147
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 81
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 82 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 139
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 140 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 169
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 51 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 107
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 108 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 165
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 166 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 195
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 86
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 87 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 144
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 145 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 174
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 88
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 89 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 146
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 147 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 176
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 147
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 148 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 145
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 146 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 175
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 84
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 85 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 142
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL AS +H D+ + N +LD+ +T KV+DF
Sbjct: 143 YL---ASKKFVHRDLAARNCMLDEKFTVKVADF 172
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V+ G + +VA+K E ++E +F+ ++ ++ H +V++ G+C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKT---IREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
LE LV EF+ +G LS Y+ ++ + L +T L + + + YL +IH
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYL--RTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIH 127
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L+ +N KVSDF + DD+ ST + V + PE
Sbjct: 128 RDLAARNCLVGENQVIKVSDF-GMTRFVLDDQYTSSTGTKFPVKWASPE 175
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 50/281 (17%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 253 TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSD 312
++ + V ++ +L H++H +S+ K + IA +TA + YLH+ SIIH D
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRD 145
Query: 313 VKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE------------- 359
+KS NI L ++ T K+ DF S + + G++ ++ PE
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 360 ---YAHT----ELLTGMNPNSYVALASNEKISMVPYF-----LDSIENNSFRQILNFQXX 407
YA EL+TG P S + ++ I MV L + +N +++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL--- 261
Query: 408 XXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRR 448
++CL+ + ERP+ + E++ L R
Sbjct: 262 --------------MAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 148
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+L AS +H D+ + N +LD+ +T KV+DF
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 178
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 92 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 148
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 149 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 206
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+L AS +H D+ + N +LD+ +T KV+DF
Sbjct: 207 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLET 253
LG G FG V+ G NT+VA+K + E I+ ++KH +V++ + E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEE 76
Query: 254 KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDV 313
+ +V E+++ G+L ++ D + LK + +AA+ A+ + Y+ + + IH D+
Sbjct: 77 PI-YIVTEYMNKGSLLDFLKDGEGRALK-LPNLVDMAAQVAAGMAYIERM---NYIHRDL 131
Query: 314 KSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
+SANIL+ + K++DF L + D+E + + + PE A
Sbjct: 132 RSANILVGNGLICKIADF-GLARLIEDNEXTARQGAKFPIKWTAPEAA 178
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 147
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+L AS +H D+ + N +LD+ +T KV+DF
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 87
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 88 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 145
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+L AS +H D+ + N +LD+ +T KV+DF
Sbjct: 146 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 175
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 122/281 (43%), Gaps = 50/281 (17%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 253 TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSD 312
++ + V ++ +L H++H +S+ K + IA +TA + YLH+ SIIH D
Sbjct: 92 PQLAI-VTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRD 145
Query: 313 VKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE------------- 359
+KS NI L ++ T K+ DF S + + G++ ++ PE
Sbjct: 146 LKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 205
Query: 360 ---YAHT----ELLTGMNPNSYVALASNEKISMVPYF-----LDSIENNSFRQILNFQXX 407
YA EL+TG P S + ++ I MV L + +N +++
Sbjct: 206 SDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL--- 261
Query: 408 XXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRR 448
++CL+ + ERP+ + E++ L R
Sbjct: 262 --------------MAECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 90
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 91 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 148
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+L AS +H D+ + N +LD+ +T KV+DF
Sbjct: 149 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 178
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 89
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 90 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 147
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+L AS +H D+ + N +LD+ +T KV+DF
Sbjct: 148 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 177
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 18/153 (11%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEW----EFL--GIISQ-VK 239
+F+ +G G FG VY G L DN KK CA + RIT+ +FL GII +
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDG---KKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS 94
Query: 240 HKNVVKILGLCLETKVT-LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIH 298
H NV+ +LG+CL ++ + L+V ++ +G L ++I +++ K + + A +
Sbjct: 95 HPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHN--PTVKDLIGFGLQVAKGMK 152
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+L AS +H D+ + N +LD+ +T KV+DF
Sbjct: 153 FL---ASKKFVHRDLAARNCMLDEKFTVKVADF 182
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 123/281 (43%), Gaps = 50/281 (17%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 253 TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSD 312
++ + V ++ +L H++H +S+ K + IA +TA + YLH+ SIIH D
Sbjct: 80 PQLAI-VTQWCEGSSLYHHLH--ASETKFEMKKLIDIARQTARGMDYLHA---KSIIHRD 133
Query: 313 VKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE------------- 359
+KS NI L ++ T K+ DF S + + G++ ++ PE
Sbjct: 134 LKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQ 193
Query: 360 ---YAHT----ELLTGMNPNSYVALASNEKISMVPYF-----LDSIENNSFRQILNFQXX 407
YA EL+TG P S + ++ I MV L + +N +++
Sbjct: 194 SDVYAFGIVLYELMTGQLPYSNIN-NRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRL--- 249
Query: 408 XXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRR 448
++CL+ + ERP+ + E++ L R
Sbjct: 250 --------------MAECLKKKRDERPSFPRILAEIEELAR 276
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 194 LGMGGFGSVYKGVL-PDNTQVAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
+G G FG V+ G L DNT VAVK + +++ + I+ Q H N+V+++G+C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + +V E V G ++ + +++ KT L++ + A+ + YL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL--RVKTLLQMVGDAAAGMEYLESKCC---IH 236
Query: 311 SDVKSANILLDDNYTAKVSDF 331
D+ + N L+ + K+SDF
Sbjct: 237 RDLAARNCLVTEKNVLKISDF 257
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 8/141 (5%)
Query: 194 LGMGGFGSVYKGVL-PDNTQVAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
+G G FG V+ G L DNT VAVK + +++ + I+ Q H N+V+++G+C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + +V E V G ++ + +++ KT L++ + A+ + YL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLRTEGARL--RVKTLLQMVGDAAAGMEYLESKCC---IH 236
Query: 311 SDVKSANILLDDNYTAKVSDF 331
D+ + N L+ + K+SDF
Sbjct: 237 RDLAARNCLVTEKNVLKISDF 257
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 9/168 (5%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIIS 236
K E+ + H LG G +G VY GV + K + D + + E FL ++
Sbjct: 26 KWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEE--FLKEAAVMK 83
Query: 237 QVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
++KH N+V++LG+C +V E++ G L Y+ + + + + L +A + +SA
Sbjct: 84 EIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA-VVLLYMATQISSA 142
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
+ YL + IH D+ + N L+ +N+ KV+DF ++ D TA
Sbjct: 143 MEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTA 187
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 20/152 (13%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRIT---EWEFLGIISQVKHKNVVKILGL 249
+G+GGFG VY+ + D V ++ ++I T + + + +KH N++ + G+
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
CL+ LV EF G L+ + K +L NW A + A ++YLH A
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVP 128
Query: 308 IIHSDVKSANILL--------DDNYTAKVSDF 331
IIH D+KS+NIL+ N K++DF
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDF 160
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 13/182 (7%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFL-- 232
F+K EL + +G G FG V G LP VAV K + +FL
Sbjct: 36 FAK-ELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCE 94
Query: 233 -GIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
I+ Q H NVV + G+ K ++V EF+ NGAL ++ Q T +++
Sbjct: 95 ASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQF-----TVIQLVG 149
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRG 351
+ LA +H D+ + NIL++ N KVSDF L + DD A+ T G
Sbjct: 150 MLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKVSDF-GLSRVIEDDPEAVYTTTGG 208
Query: 352 TV 353
+
Sbjct: 209 KI 210
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 72
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + + V E++S G+L ++ ++ + L+ + +AA+ AS + Y+ + + +H
Sbjct: 73 SEEPIXI-VTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 127
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 128 RDLRAANILVGENLVCKVADF-GLARLIEDNEXTARQGAKFPIKWTAPEAA 177
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 80/162 (49%), Gaps = 15/162 (9%)
Query: 194 LGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G G FG V G LP +++V K + +FLG I+ Q H N++++
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLE 112
Query: 248 GLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
G+ ++K ++V E++ NG+L ++ HD V++ + + AS + YL +
Sbjct: 113 GVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGMLRGIASGMKYLSDMG- 167
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
+H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 168 --FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT 207
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 36 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 95
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 96 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 147
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 148 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKN 204
Query: 371 PNSY 374
P S+
Sbjct: 205 PYSF 208
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 155
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKN 212
Query: 371 PNSY 374
P S+
Sbjct: 213 PYSF 216
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 62/307 (20%)
Query: 176 KIFSKSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGI 234
+IF ++EL K LG G FG+V+KGV +P+ + + + E + F +
Sbjct: 26 RIFKETELRKLK-----VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 80
Query: 235 ------ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWK 284
I + H ++V++LGLC + + L V +++ G+L ++ Q+L NW
Sbjct: 81 TDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW- 138
Query: 285 TCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
+ A ++YL ++H ++ + N+LL +V+DF + DD+
Sbjct: 139 -----GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 190
Query: 345 MSTMIRGTVGYLDPE------YAHT-----------ELLT-GMNPNSYVALASNEKISMV 386
+ + + + ++ E Y H EL+T G P + + LA V
Sbjct: 191 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE------V 244
Query: 387 PYFLDSIENNSFRQILNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRL 446
P L+ E + QI KC I RPT KE++ E R+
Sbjct: 245 PDLLEKGERLAQPQICTIDVYMVMV------------KCWMIDENIRPTFKELANEFTRM 292
Query: 447 RRLQENY 453
R Y
Sbjct: 293 ARDPPRY 299
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 26 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 84
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 85 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 140
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 141 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 195
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 9 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 123
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 62/307 (20%)
Query: 176 KIFSKSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGI 234
+IF ++EL K LG G FG+V+KGV +P+ + + + E + F +
Sbjct: 8 RIFKETELRKLK-----VLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAV 62
Query: 235 ------ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWK 284
I + H ++V++LGLC + + L V +++ G+L ++ Q+L NW
Sbjct: 63 TDHMLAIGSLDHAHIVRLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW- 120
Query: 285 TCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
+ A ++YL ++H ++ + N+LL +V+DF + DD+
Sbjct: 121 -----GVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172
Query: 345 MSTMIRGTVGYLDPE------YAHT-----------ELLT-GMNPNSYVALASNEKISMV 386
+ + + + ++ E Y H EL+T G P + + LA V
Sbjct: 173 LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE------V 226
Query: 387 PYFLDSIENNSFRQILNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRL 446
P L+ E + QI KC I RPT KE++ E R+
Sbjct: 227 PDLLEKGERLAQPQICTIDVYMVMV------------KCWMIDENIRPTFKELANEFTRM 274
Query: 447 RRLQENY 453
R Y
Sbjct: 275 ARDPPRY 281
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 43 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 102
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 103 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 154
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 155 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKN 211
Query: 371 PNSY 374
P S+
Sbjct: 212 PYSF 215
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 127
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQ---DKN 184
Query: 371 PNSY 374
P S+
Sbjct: 185 PYSF 188
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 36 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 94
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 95 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 150
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 151 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 205
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 103
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 104 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 155
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 156 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR---MQDKN 212
Query: 371 PNSY 374
P S+
Sbjct: 213 PYSF 216
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E++ NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT 207
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 75
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ ++ + L+ + +AA+ AS + Y+ + + +H
Sbjct: 76 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 130
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 131 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 180
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 248
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ ++ + L+ + +AA+ AS + Y+ + + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 303
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 304 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 248
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ ++ + L+ + +AA+ AS + Y+ + + +H
Sbjct: 249 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 303
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 304 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 78 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 129
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 130 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ---DKN 186
Query: 371 PNSY 374
P S+
Sbjct: 187 PYSF 190
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 331
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ ++ + L+ + +AA+ AS + Y+ + + +H
Sbjct: 332 SEEPI-YIVTEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 386
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 387 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 436
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +++ E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPIYIVI-EYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLRAANILVGENLVCKVADF-GLARLIEDNEXTARQGAKFPIKWTAPEAA 187
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 127
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ---DKN 184
Query: 371 PNSY 374
P S+
Sbjct: 185 PYSF 188
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 248
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ ++ + L+ + +AA+ AS + Y+ + + +H
Sbjct: 249 SEEPI-YIVGEYMSKGSLLDFLKGETGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 303
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 304 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 353
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 132
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+KS NI L ++ T K+ DF S + + G++ ++ PE
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E + NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKIRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 81 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 132
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+KS NI L ++ T K+ DF S + + G++ ++ PE
Sbjct: 133 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +++ E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPIYIVI-EYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 13/170 (7%)
Query: 176 KIFSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCA--DEIRITEWEFLG 233
+IF S+L+ LG G FG K + +V V K + +E + T + +
Sbjct: 5 RIFRPSDLIHG-----EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVK 59
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ ++H NV+K +G+ + K + E++ G L I SQ W + A +
Sbjct: 60 VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQY--PWSQRVSFAKDI 117
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDET 343
AS + YLHS+ +IIH D+ S N L+ +N V+DF L + D++T
Sbjct: 118 ASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADF-GLARLMVDEKT 163
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 90/184 (48%), Gaps = 14/184 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-LGIISQVKHKNVVKILGLCLE 252
+G G FG+VYKG + V + ++ ++ +G++ + +H N++ +G
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 253 TKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
++ + V ++ +L H++H + +++K + IA +TA + YLH+ SIIH
Sbjct: 76 PQLAI-VTQWCEGSSLYHHLHIIETKFEMIK----LIDIARQTAQGMDYLHA---KSIIH 127
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTGMN 370
D+KS NI L ++ T K+ DF S + + G++ ++ PE + N
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQ---DKN 184
Query: 371 PNSY 374
P S+
Sbjct: 185 PYSF 188
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIISQVKHKNVVKILGLCL 251
+G G FG V K VA+K+ E + I E L +S+V H N+VK+ G CL
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVE---LRQLSRVNHPNIVKLYGACL 71
Query: 252 ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
LV E+ G+L + +H + + + + YLHS+ ++IH
Sbjct: 72 NP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 312 DVKSANILLDDNYTA-KVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+K N+LL T K+ DF + + D +T M T +G+ ++ PE
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGT----ACDIQTHM-TNNKGSAAWMAPE 173
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 73
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 74 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 128
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 129 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 178
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPI-YIVMEYMSKGCLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 14/169 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIISQVKHKNVVKILGLCL 251
+G G FG V K VA+K+ E + I E L +S+V H N+VK+ G CL
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQIESESERKAFIVE---LRQLSRVNHPNIVKLYGACL 72
Query: 252 ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
LV E+ G+L + +H + + + + YLHS+ ++IH
Sbjct: 73 NP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 312 DVKSANILLDDNYTA-KVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+K N+LL T K+ DF + + D +T M T +G+ ++ PE
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGT----ACDIQTHM-TNNKGSAAWMAPE 174
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 88/199 (44%), Gaps = 21/199 (10%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFL--- 232
K E + F LG G FG V + G+ ++ + V M E E L
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 233 -GIISQV-KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIA 290
I+S + +H+N+V +LG C L++ E+ G L +++ KS +VL+ IA
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLET-DPAFAIA 157
Query: 291 AETASAIHYLHS----------LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSD 340
TAS LH LAS + IH DV + N+LL + + AK+ DF I +D
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 341 DETAMSTMIRGTVGYLDPE 359
+ R V ++ PE
Sbjct: 218 SNYIVKGNARLPVKWMAPE 236
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 71
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 72 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 126
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 127 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 176
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 89/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPI-YIVCEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 9 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 67
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E + NG+L ++ HD V++ + +
Sbjct: 68 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ----LVGM 123
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 124 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 178
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLV 160
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGR 220
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 280
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPI-YIVTEYMSKGCLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 16/178 (8%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K EL + +G G FG V G LP +++V K + +FLG
Sbjct: 38 FAK-ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGE 96
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
I+ Q H N++++ G+ ++K ++V E + NG+L ++ HD V++ + +
Sbjct: 97 ASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQ----LVGM 152
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
AS + YL + +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 153 LRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 207
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 86/168 (51%), Gaps = 6/168 (3%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLET 253
LG G FG V+ G T+VA+K + + ++ +++H+ +V++ + E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE 252
Query: 254 KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDV 313
+ +V E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H D+
Sbjct: 253 PI-YIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVHRDL 307
Query: 314 KSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 308 RAANILVGENLVCKVADF-GLGRLIEDNEYTARQGAKFPIKWTAPEAA 354
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 76
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 137 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 167
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKILGLC 250
LG G FG V G VA+K E ++E EF+ ++ + H+ +V++ G+C
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + ++ E+++NG L +Y+ + + + L + + A+ YL S +H
Sbjct: 73 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLH 127
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L++D KVSDF L DDE S + V + PE
Sbjct: 128 RDLAARNCLVNDQGVVKVSDF-GLSRYVLDDEYTSSVGSKFPVRWSPPE 175
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 31/285 (10%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTCL 287
KN++ +LG C + ++ E+ S G L Y+ + ++ +K +
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
+ A + YL AS IH D+ + N+L+ +N K++DF I++ D +T
Sbjct: 161 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 348 MIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXX 407
R V ++ PE + T + + E ++ I ++L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 277
Query: 408 XXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 278 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKILGLC 250
LG G FG V G VA+K E ++E EF+ ++ + H+ +V++ G+C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + ++ E+++NG L +Y+ + + + L + + A+ YL S +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L++D KVSDF L DDE S + V + PE
Sbjct: 129 RDLAARNCLVNDQGVVKVSDF-GLSRYVLDDEYTSSVGSKFPVRWSPPE 176
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKILGLC 250
LG G FG V G VA+K E ++E EF+ ++ + H+ +V++ G+C
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + ++ E+++NG L +Y+ + + + L + + A+ YL S +H
Sbjct: 69 TKQRPIFIITEYMANGCLLNYLREMRHRF--QTQQLLEMCKDVCEAMEYLE---SKQFLH 123
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L++D KVSDF L DDE S + V + PE
Sbjct: 124 RDLAARNCLVNDQGVVKVSDF-GLSRYVLDDEYTSSVGSKFPVRWSPPE 171
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 79
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E+++ G+L ++ ++ + L+ + ++A+ AS + Y+ + + +H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKYLRL-PQLVDMSAQIASGMAYVERM---NYVH 134
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 135 RDLRAANILVGENLVCKVADF-GLARLIEDNEWTARQGAKFPIKWTAPEAA 184
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 85
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 176
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 78
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 139 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 169
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 84
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 175
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 91
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 182
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 79
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E+++ G+L ++ ++ + L+ + ++A+ AS + Y+ + + +H
Sbjct: 80 SEEPI-YIVTEYMNKGSLLDFLKGETGKYLR-LPQLVDMSAQIASGMAYVERM---NYVH 134
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+++ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 135 RDLRAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 184
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 82
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 143 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 173
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V G N +VAVK C T FL +++Q++H N+V++LG+
Sbjct: 29 IGKGEFGDVMLGDYRGN-KVAVK---CIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 251 LETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
+E K L +V E+++ G+L Y+ + VL L+ + + A+ YL + +
Sbjct: 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLEG---NNFV 139
Query: 310 HSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
H D+ + N+L+ ++ AKVSDF SS +T
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 174
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKILGLC 250
LG G FG V G VA+K E ++E EF+ ++ + H+ +V++ G+C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + ++ E+++NG L +Y+ + + + L + + A+ YL S +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L++D KVSDF L DDE S + V + PE
Sbjct: 144 RDLAARNCLVNDQGVVKVSDF-GLSRYVLDDEETSSVGSKFPVRWSPPE 191
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKILGLC 250
LG G FG V G VA+K E ++E EF+ ++ + H+ +V++ G+C
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + ++ E+++NG L +Y+ + + + L + + A+ YL S +H
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLH 134
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L++D KVSDF L DDE S + V + PE
Sbjct: 135 RDLAARNCLVNDQGVVKVSDF-GLSRYVLDDEYTSSVGSKFPVRWSPPE 182
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 88/171 (51%), Gaps = 12/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKY---MCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V+ G T+VA+K + E + E + ++ +++H+ +V++ +
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQ---VMKKLRHEKLVQLYAVV 82
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + +V E++S G+L ++ + + L+ + +AA+ AS + Y+ + + +H
Sbjct: 83 SEEPI-YIVTEYMSKGSLLDFLKGEMGKYLR-LPQLVDMAAQIASGMAYVERM---NYVH 137
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
D+ +ANIL+ +N KV+DF L + D+E + + + PE A
Sbjct: 138 RDLAAANILVGENLVCKVADF-GLARLIEDNEYTARQGAKFPIKWTAPEAA 187
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKILGLC 250
LG G FG V G VA+K E ++E EF+ ++ + H+ +V++ G+C
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + ++ E+++NG L +Y+ + + + L + + A+ YL S +H
Sbjct: 74 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L++D KVSDF L DDE S + V + PE
Sbjct: 129 RDLAARNCLVNDQGVVKVSDF-GLSRYVLDDEYTSSRGSKFPVRWSPPE 176
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V G N +VAVK C T FL +++Q++H N+V++LG+
Sbjct: 14 IGKGEFGDVMLGDYRGN-KVAVK---CIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 251 LETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
+E K L +V E+++ G+L Y+ + VL L+ + + A+ YL + +
Sbjct: 69 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLEG---NNFV 124
Query: 310 HSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
H D+ + N+L+ ++ AKVSDF SS +T
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 159
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 84
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 145 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 175
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 85
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 146 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 176
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKILGLC 250
LG G FG V G VA+K E ++E EF+ ++ + H+ +V++ G+C
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKM---IKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ + ++ E+++NG L +Y+ + + + L + + A+ YL S +H
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREMRHRFQT--QQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+ + N L++D KVSDF L DDE S + V + PE
Sbjct: 144 RDLAARNCLVNDQGVVKVSDF-GLSRYVLDDEYTSSVGSKFPVRWSPPE 191
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 91
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ + N +++A E A +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 152 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 182
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 113
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 174 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 204
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V G N +VAVK C T FL +++Q++H N+V++LG+
Sbjct: 20 IGKGEFGDVMLGDYRGN-KVAVK---CIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 251 LETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
+E K L +V E+++ G+L Y+ + VL L+ + + A+ YL + +
Sbjct: 75 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLEG---NNFV 130
Query: 310 HSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
H D+ + N+L+ ++ AKVSDF SS +T
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 165
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
+G G FG V G N +VAVK C T FL +++Q++H N+V++LG+
Sbjct: 201 IGKGEFGDVMLGDYRGN-KVAVK---CIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 251 LETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
+E K L +V E+++ G+L Y+ + VL L+ + + A+ YL + +
Sbjct: 256 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGG-DCLLKFSLDVCEAMEYLEG---NNFV 311
Query: 310 HSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
H D+ + N+L+ ++ AKVSDF SS +T
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG 346
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 67
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 125
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 126 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEXTAREGAKFPIK 181
Query: 355 YLDPE 359
+ PE
Sbjct: 182 WTAPE 186
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 81
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ + N +++A E A +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ +++T K+ DF
Sbjct: 142 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDF 172
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 81/178 (45%), Gaps = 16/178 (8%)
Query: 194 LGMGGFGSVY---KGVLPDNTQVAVKK-YMCADEIRITEWEFLGII---SQVKHKNVVKI 246
LG GG +VY +L N +VA+K ++ E T F + SQ+ H+N+V +
Sbjct: 19 LGGGGMSTVYLAEDTIL--NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+ + E LV E++ LS YI S + T + + I + H +
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYI---ESHGPLSVDTAINFTNQILDGIKHAHDM--- 130
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTE 364
I+H D+K NIL+D N T K+ DF + S+ + + GTV Y PE A E
Sbjct: 131 RIVHRDIKPQNILIDSNKTLKIFDF-GIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 280
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 17 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 69
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 70 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 127
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 128 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEXTAREGAKFPIK 183
Query: 355 YLDPE 359
+ PE
Sbjct: 184 WTAPE 188
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 111/284 (39%), Gaps = 29/284 (10%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ----VAVKKYMCADEIR-------ITEWEFLGIISQV 238
LG G FG V G+ D + VAVK M D+ ++E E + +I
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVK--MLKDDATEKDLSDLVSEMEMMKMIG-- 98
Query: 239 KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE------ 292
KHKN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 293 ----TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
T + LAS IH D+ + N+L+ +N K++DF I++ D +T
Sbjct: 159 LVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN 218
Query: 349 IRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXX 408
R V ++ PE + T + + E ++ I ++L
Sbjct: 219 GRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM 278
Query: 409 XXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 279 DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 61
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 119
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEXTAREGAKFPIK 175
Query: 355 YLDPE 359
+ PE
Sbjct: 176 WTAPE 180
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 18 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 70
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 71 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 128
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 129 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEXTAREGAKFPIK 184
Query: 355 YLDPE 359
+ PE
Sbjct: 185 WTAPE 189
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 21/199 (10%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFL--- 232
K E + F LG G FG V + G+ ++ + V M E E L
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 233 -GIISQV-KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIA 290
I+S + +H+N+V +LG C L++ E+ G L +++ KS +VL+ IA
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLET-DPAFAIA 157
Query: 291 AETASAIHYLHS----------LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSD 340
T S LH LAS + IH DV + N+LL + + AK+ DF I +D
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND 217
Query: 341 DETAMSTMIRGTVGYLDPE 359
+ R V ++ PE
Sbjct: 218 SNYIVKGNARLPVKWMAPE 236
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGR 220
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 280
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 101 KNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 280
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 10 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 62
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 63 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 120
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 121 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEXTAREGAKFPIK 176
Query: 355 YLDPE 359
+ PE
Sbjct: 177 WTAPE 181
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 15 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 67
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 68 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 125
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 126 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEYTAREGAKFPIK 181
Query: 355 YLDPE 359
+ PE
Sbjct: 182 WTAPE 186
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 14 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 66
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 67 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 124
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 125 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEYTAREGAKFPIK 180
Query: 355 YLDPE 359
+ PE
Sbjct: 181 WTAPE 185
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 61
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 119
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEXTAREGAKFPIK 175
Query: 355 YLDPE 359
+ PE
Sbjct: 176 WTAPE 180
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 11 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 63
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 64 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 121
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 122 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEXTAREGAKFPIK 177
Query: 355 YLDPE 359
+ PE
Sbjct: 178 WTAPE 182
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 19 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 71
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 72 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 129
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 130 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEYTAREGAKFPIK 185
Query: 355 YLDPE 359
+ PE
Sbjct: 186 WTAPE 190
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVY----KGVLPDN--TQVAVKKYMCADEIRITEWEFLGIISQVKHKN---VV 244
LG G FG VY KGV+ D T+VA+K A +R EFL S +K N VV
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMR-ERIEFLNEASVMKEFNCHHVV 78
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL++ E ++ G L Y+ ++ N +++A E A +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N + +++T K+ DF
Sbjct: 139 AYLNA---NKFVHRDLAARNCXVAEDFTVKIGDF 169
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 87
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 88 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 147
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 148 SCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 207
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 208 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 267
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 268 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N +++DF I++ D +T R
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGR 220
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 280
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G G FG V +G L P + V K + EFL I+ Q +H N++++
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G+ + +++ EF+ NGAL ++ Q T +++ + LA S
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQF-----TVIQLVGMLRGIASGMRYLAEMS 138
Query: 308 IIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + NIL++ N KVSDF
Sbjct: 139 YVHRDLAARNILVNSNLVCKVSDF 162
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 31/285 (10%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 89
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTCL 287
KN++ +LG C + ++ E+ S G L Y+ + ++ +K +
Sbjct: 90 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 149
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
+ A + YL AS IH D+ + N+L+ +N K++DF I++ D +T
Sbjct: 150 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 206
Query: 348 MIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXX 407
R V ++ PE + T + + E ++ I ++L
Sbjct: 207 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 266
Query: 408 XXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 267 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 311
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 9 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 61
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 119
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEYTAREGAKFPIK 175
Query: 355 YLDPE 359
+ PE
Sbjct: 176 WTAPE 180
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 109/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 92
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ E+ S G L Y+ + ++ R+ E
Sbjct: 93 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 152
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 153 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 212
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 213 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 272
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 273 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 314
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 92
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 153 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 270 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 194 LGMGGFGSVY----KGVLP--DNTQVAVKKYMCADEIRITEWEFLG-IISQVKHKNVVKI 246
LG G FG V+ +LP D VAVK A E +++ +++ ++H+++V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWK----------TCLRIAAETA 294
G+C E + L+V+E++ +G L+ ++ H +++L + L +A++ A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ + YL L +H D+ + N L+ K+ DF I S D + +
Sbjct: 146 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 355 YLDPE 359
++ PE
Sbjct: 203 WMPPE 207
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G G FG V +G L P + V K + EFL I+ Q +H N++++
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G+ + +++ EF+ NGAL ++ Q T +++ + LA S
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQF-----TVIQLVGMLRGIASGMRYLAEMS 136
Query: 308 IIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + NIL++ N KVSDF
Sbjct: 137 YVHRDLAARNILVNSNLVCKVSDF 160
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 194 LGMGGFGSVY----KGVLP--DNTQVAVKKYMCADEIRITEWEFLG-IISQVKHKNVVKI 246
LG G FG V+ +LP D VAVK A E +++ +++ ++H+++V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWK----------TCLRIAAETA 294
G+C E + L+V+E++ +G L+ ++ H +++L + L +A++ A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ + YL L +H D+ + N L+ K+ DF I S D + +
Sbjct: 140 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 355 YLDPE 359
++ PE
Sbjct: 197 WMPPE 201
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 4 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 56
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 57 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 114
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D+E + +
Sbjct: 115 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDNEYTAREGAKFPIK 170
Query: 355 YLDPE 359
+ PE
Sbjct: 171 WTAPE 175
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 12/176 (6%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG- 233
F+K E+ + +G G FG V G LP ++ V K + +FLG
Sbjct: 15 FAK-EIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGE 73
Query: 234 --IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
I+ Q H N++ + G+ ++K ++V E++ NG+L ++ Q T +++
Sbjct: 74 ASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQF-----TVIQLVG 128
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
+ L+ +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 129 MLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT 184
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 19/196 (9%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFL--- 232
K E + F LG G FG V + G+ ++ + V M E E L
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 233 -GIISQV-KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------W 283
I+S + +H+N+V +LG C L++ E+ G L +++ K+ L
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 159
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDET 343
+ L +++ A + +L AS + IH DV + N+LL + + AK+ DF I +D
Sbjct: 160 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 216
Query: 344 AMSTMIRGTVGYLDPE 359
+ R V ++ PE
Sbjct: 217 IVKGNARLPVKWMAPE 232
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 111/285 (38%), Gaps = 31/285 (10%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 146
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTCL 287
KN++ +LG C + ++ E+ S G L Y+ + ++ +K +
Sbjct: 147 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 206
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
+ A + YL AS IH D+ + N+L+ +N K++DF I++ D +T
Sbjct: 207 SCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTT 263
Query: 348 MIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXX 407
R V ++ PE + T + + E ++ I ++L
Sbjct: 264 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR 323
Query: 408 XXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 324 MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 22/185 (11%)
Query: 194 LGMGGFGSVY----KGVLP--DNTQVAVKKYMCADEIRITEWEFLG-IISQVKHKNVVKI 246
LG G FG V+ +LP D VAVK A E +++ +++ ++H+++V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWK----------TCLRIAAETA 294
G+C E + L+V+E++ +G L+ ++ H +++L + L +A++ A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ + YL L +H D+ + N L+ K+ DF I S D + +
Sbjct: 169 AGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 355 YLDPE 359
++ PE
Sbjct: 226 WMPPE 230
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 11/175 (6%)
Query: 194 LGMGGFGSVYKG-VLPDNTQVAVKKYMCAD----EIRITEWEFLGIISQVKHKNVVKILG 248
+G G F VY+ L D VA+KK D + R + + ++ Q+ H NV+K
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 249 LCLETKVTLLVYEFVSNGALSHYI-HDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
+E +V E G LS I H K + L +T + + SA+ ++HS
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---R 156
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAH 362
++H D+K AN+ + K+ D L S TA +++ GT Y+ PE H
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDL-GLGRFFSSKTTAAHSLV-GTPYYMSPERIH 209
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 16/174 (9%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQVKHKNVVKILGLC 250
LG G FG V G VAVK E ++E EF + ++ H +VK G+C
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKM---IKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 251 LETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ +V E++SNG L +Y+ H K + + + C + A L S
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMA-------FLESHQF 125
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAH 362
IH D+ + N L+D + KVSDF + DD+ S + V + PE H
Sbjct: 126 IHRDLAARNCLVDRDLCVKVSDF-GMTRYVLDDQYVSSVGTKFPVKWSAPEVFH 178
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 86/196 (43%), Gaps = 19/196 (9%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFL--- 232
K E + F LG G FG V + G+ ++ + V M E E L
Sbjct: 32 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 91
Query: 233 -GIISQV-KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------W 283
I+S + +H+N+V +LG C L++ E+ G L +++ K+ L
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLEL 151
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDET 343
+ L +++ A + +L AS + IH DV + N+LL + + AK+ DF I +D
Sbjct: 152 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 208
Query: 344 AMSTMIRGTVGYLDPE 359
+ R V ++ PE
Sbjct: 209 IVKGNARLPVKWMAPE 224
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 81
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 142 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 258
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 259 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 304
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 92
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 153 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 270 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 80
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 81 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 140
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ ++T K+ DF
Sbjct: 141 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDF 171
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 77
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 138 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 254
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 255 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 300
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 83
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ ++T K+ DF
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 92
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 153 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 270 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G G G V G L P V V K + A +FL I+ Q H N++++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 248 GLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
G+ ++ ++V E++ NG+L ++ HD +++ + + + + YL L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ----LVGMLRGVGAGMRYLSDLG- 171
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+H D+ + N+L+D N KVSDF L + DD A T G +
Sbjct: 172 --YVHRDLAARNVLVDSNLVCKVSDF-GLSRVLEDDPDAAXTTTGGKI 216
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 82
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ ++T K+ DF
Sbjct: 143 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDF 173
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 92
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 153 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 269
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 270 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 315
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 84
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 145 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 261
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 262 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 307
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 85
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 146 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 262
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 263 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 308
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G+G FG V G L P ++ V K + A +FL I+ Q H N++ +
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA---ETASAIHYLHSLA 304
G+ + K +++ E++ NG+L ++ + T +++ S + YL +
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLRGIGSGMKYLSDM- 150
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
S +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 151 --SAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 191
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 83
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ ++T K+ DF
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 108/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ + S G L Y+ + ++ R+ E
Sbjct: 101 KNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 280
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 17/163 (10%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G+G FG V G L P ++ V K + A +FL I+ Q H N++ +
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA---ETASAIHYLHSLA 304
G+ + K +++ E++ NG+L ++ + T +++ S + YL +
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLRGIGSGMKYLSDM- 135
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
S +H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 176
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 83
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ ++T K+ DF
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 83
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H D+ + N ++ ++T K+ DF
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDF 174
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 83
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 136
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 137 DR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 247
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 248 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 108/282 (38%), Gaps = 25/282 (8%)
Query: 194 LGMGGFGSVYK----GVLPDNTQ--VAVKKYMCADEIR-------ITEWEFLGIISQVKH 240
LG G FG V G+ D + V V M D+ ++E E + +I KH
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG--KH 100
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE-------- 292
KN++ +LG C + ++ + S G L Y+ + ++ R+ E
Sbjct: 101 KNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 293 --TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
T + LAS IH D+ + N+L+ +N K++DF I++ D +T R
Sbjct: 161 SCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGR 220
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXX 410
V ++ PE + T + + E ++ I ++L
Sbjct: 221 LPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 280
Query: 411 XXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 322
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 77/168 (45%), Gaps = 16/168 (9%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G G G V G L P V V K + A +FL I+ Q H N++++
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 248 GLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
G+ ++ ++V E++ NG+L ++ HD +++ + + + + YL L
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQ----LVGMLRGVGAGMRYLSDLG- 171
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+H D+ + N+L+D N KVSDF L + DD A T G +
Sbjct: 172 --YVHRDLAARNVLVDSNLVCKVSDF-GLSRVLEDDPDAAYTTTGGKI 216
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 11/160 (6%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G+G FG V G L P ++ V K + A +FL I+ Q H N++ +
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G+ + K +++ E++ NG+L ++ + T +++ + L+ S
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKNDGRF-----TVIQLVGMLRGIGSGMKYLSDMS 130
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
+H D+ + NIL++ N KVSDF + D E A +T
Sbjct: 131 YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT 170
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 129/308 (41%), Gaps = 40/308 (12%)
Query: 171 AFSRMKIFSKSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIR 225
A + ++I ++E K LG G FG+VYKG+ +P+ + VA+K+ A +
Sbjct: 2 AMALLRILKETEFKKIK-----VLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPK 56
Query: 226 ITEWEFLG---IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQ 278
+ E L +++ V + +V ++LG+CL + V L+ + + G L Y+ + SQ
Sbjct: 57 ANK-EILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQ 114
Query: 279 VLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
L NW C++I A ++YL ++H D+ + N+L+ K++DF +
Sbjct: 115 YLLNW--CVQI----AEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 165
Query: 339 SDDETAMSTMIRGTVGYLDPE------YAHTELLTGMNPNSYVALASNEKISMVPYFLDS 392
++++ + + + ++ E Y H + + + K PY D
Sbjct: 166 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DG 219
Query: 393 IENNSFRQILNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
I + IL KC I RP +E+ E ++ R +
Sbjct: 220 IPASEISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQR 279
Query: 453 YWARKNNE 460
Y + +E
Sbjct: 280 YLVIQGDE 287
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 85
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 138
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 139 DR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 249
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 250 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 294
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 113/286 (39%), Gaps = 33/286 (11%)
Query: 194 LGMGGFGSVYK----GVLPDN----TQVAVKKYMCADEIR------ITEWEFLGIISQVK 239
LG G FG V G+ D T+VAVK + +D I+E E + +I K
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVK-MLKSDATEKDLSDLISEMEMMKMIG--K 133
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK-------------NWKTC 286
HKN++ +LG C + ++ E+ S G L Y+ + L+ + K
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 287 LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMS 346
+ A + A + Y LAS IH D+ + N+L+ ++ K++DF I D +
Sbjct: 194 VSCAYQVARGMEY---LASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 347 TMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQX 406
T R V ++ PE + T + + E ++ + ++L
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 310
Query: 407 XXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
C ++RPT K++ E+LDR+ L N
Sbjct: 311 RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN 356
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 83
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 136
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 137 DR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 247
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 83
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 84 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 136
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 137 DR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 247
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 248 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIR--ITEWEFLGIISQVKHKNVVKILGLC 250
LG G +GSVYK + + Q VA+K+ +++ I E + I+ Q +VVK G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKE---ISIMQQCDSPHVVKYYGSY 93
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ +V E+ G++S I ++ + ++ I T + YLH + IH
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED--EIATILQSTLKGLEYLHFMRK---IH 148
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+K+ NILL+ AK++DF V D A + GT ++ PE
Sbjct: 149 RDIKAGNILLNTEGHAKLADFG--VAGQLTDXMAKRNXVIGTPFWMAPE 195
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 190 FHHCLGMGGFGSVYK------GVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNV 243
F +G G FG V K G+ D +K+Y D+ R E + H N+
Sbjct: 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 88
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI------ 297
+ +LG C L E+ +G L ++ + S+VL+ IA TAS +
Sbjct: 89 INLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLET-DPAFAIANSTASTLSSQQLL 145
Query: 298 HY-------LHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
H+ + L+ IH D+ + NIL+ +NY AK++DF
Sbjct: 146 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 186
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 197 GGFGSVYKGVLPDNTQVAVKKYMCADEIRI-TEWEFLGIISQVKHKNVVKILGLCLETKV 255
G FG V+K L N VAVK + D+ E+E + +KH+N+++ +G E +
Sbjct: 35 GRFGCVWKAQLL-NEYVAVKIFPIQDKQSWQNEYEVYSL-PGMKHENILQFIGA--EKRG 90
Query: 256 T------LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH-------S 302
T L+ F G+LS ++ K++ V +W IA A + YLH
Sbjct: 91 TSVDVDLWLITAFHEKGSLSDFL--KANVV--SWNELCHIAETMARGLAYLHEDIPGLKD 146
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
P+I H D+KS N+LL +N TA ++DF + + + GT Y+ PE
Sbjct: 147 GHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 190 FHHCLGMGGFGSVYK------GVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNV 243
F +G G FG V K G+ D +K+Y D+ R E + H N+
Sbjct: 19 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 78
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI------ 297
+ +LG C L E+ +G L ++ + S+VL+ IA TAS +
Sbjct: 79 INLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLET-DPAFAIANSTASTLSSQQLL 135
Query: 298 HY-------LHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
H+ + L+ IH D+ + NIL+ +NY AK++DF
Sbjct: 136 HFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 176
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 88
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 89 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 141
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 142 DR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 252
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 81
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 134
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 245
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 82
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 135
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 136 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 246
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 247 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 291
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 16/182 (8%)
Query: 181 SELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF---LGIISQ 237
SE++ +T+ +G G FG+VYKG + VAVK D F + ++ +
Sbjct: 36 SEVMLSTR-----IGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLRK 88
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
+H N++ +G + + + V ++ +L ++H + ++ + IA +TA +
Sbjct: 89 TRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETKF--QMFQLIDIARQTAQGM 145
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLD 357
YLH+ +IIH D+KS NI L + T K+ DF S + G+V ++
Sbjct: 146 DYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMA 202
Query: 358 PE 359
PE
Sbjct: 203 PE 204
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G FG V+ G +T+VAVK M D FL +
Sbjct: 5 EVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 57
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 58 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 115
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH ++++ANIL+ D + K++DF L + D+E + +
Sbjct: 116 EGMAFIEER---NYIHRNLRAANILVSDTLSCKIADF-GLARLIEDNEYTAREGAKFPIK 171
Query: 355 YLDPE 359
+ PE
Sbjct: 172 WTAPE 176
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 84
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 85 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 137
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 138 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 248
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 83
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 84 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 136
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 137 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 247
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS++ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKLNHQN 95
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 188
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 81
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 82 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 134
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 245
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 80/150 (53%), Gaps = 23/150 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 27 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 85
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 86 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 138
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
++H D+ + N+L+ K++DF
Sbjct: 139 DR---RLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 33 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 91
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 92 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 144
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 145 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 255
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 256 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 300
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 84
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 85 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 137
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 138 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 248
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 249 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 121
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 122 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 181
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 182 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 214
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS++ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKLNHQN 109
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 110 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 202
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AA 291
++S++ H VK L C + L + NG L YI S +TC R A
Sbjct: 90 VMSRLDHPFFVK-LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTA 144
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRG 351
E SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + G
Sbjct: 145 EIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVG 201
Query: 352 TVGYLDPE 359
T Y+ PE
Sbjct: 202 TAQYVSPE 209
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 121/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 24 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 82
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 83 LLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 135
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 136 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 246
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 247 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 291
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 17 FLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ EF+ G+L Y+ ++ + L+ ++ + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI--DHIKLLQYTSQICKGMEYL- 133
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDF 161
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 111
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 112 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 171
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 172 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 204
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 84
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 85 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 137
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 138 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 248
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 17 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 75
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 76 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 128
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 129 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 239
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 240 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 284
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 26 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 84
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 85 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 137
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 138 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 248
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 249 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 293
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 30 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 88
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 89 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 141
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 142 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 252
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 25 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 83
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 84 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 136
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 137 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 247
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 248 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 292
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 117
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 175 AQYVSPE 181
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 116
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 117 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 174 AQYVSPE 180
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 29 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 87
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 88 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 140
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 141 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 251
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 252 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 296
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 23/150 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 48 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 106
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 107 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 159
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
++H D+ + N+L+ K++DF
Sbjct: 160 DR---RLVHRDLAARNVLVKTPQHVKITDF 186
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 81
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 134
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 245
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 290
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 115
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 116 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 173 AQYVSPE 179
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 101
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 102 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 161
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 162 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 194
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 95
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 188
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 25/202 (12%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFL--- 232
K E + F LG G FG V + G+ ++ + V M E E L
Sbjct: 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 99
Query: 233 -GIISQV-KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK--------- 281
I+S + +H+N+V +LG C L++ E+ G L +++ K L+
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNP 159
Query: 282 ----NWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPI 337
+ + L +++ A + +L AS + IH DV + N+LL + + AK+ DF I
Sbjct: 160 EEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
Query: 338 SSDDETAMSTMIRGTVGYLDPE 359
+D + R V ++ PE
Sbjct: 217 MNDSNYIVKGNARLPVKWMAPE 238
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 118
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 176 AQYVSPE 182
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 95
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 96 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 155
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 188
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 94
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 95 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 187
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 112
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 113 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 172
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 173 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 205
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 109
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 110 IVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 169
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 202
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 135
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 136 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 195
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 196 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 228
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 137
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 138 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 195 AQYVSPE 201
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 457 IGVITENPVWIIM-ELCTLGELRSFLQVRKFSL--DLASLILYAYQLSTALAYLES---K 510
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 511 RFVHRDIAARNVLVSSNDCVKLGDF 535
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 94
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 95 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 154
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 187
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITE--WEFLGIISQVKHKNVVKILGLC 250
LG G +G VY G L + ++A+K+ D R ++ E + + +KHKN+V+ LG
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + E V G+LS + K + N +T + + YLH I+H
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 145
Query: 311 SDVKSANILLDDNYTA--KVSDFES---LVPISSDDETAMSTMIRGTVGYLDPE 359
D+K N+L+ + Y+ K+SDF + L I+ ET GT+ Y+ PE
Sbjct: 146 RDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTET-----FTGTLQYMAPE 193
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 140
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 198 AQYVSPE 204
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 194 LGMGGFGSVYKGVLPDN----TQVAVKKYMCADEIRITEWE-FLG---IISQVKHKNVVK 245
LG G FG VY+GV ++ VAVK C + + E F+ I+ + H ++VK
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKT--CKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 73
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
++G+ +E + T ++ E G L HY+ + S +VL T + + + A+ YL S+
Sbjct: 74 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESI 128
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHT 363
+ +H D+ NIL+ K+ DF L D++ +++ R + ++ PE +
Sbjct: 129 ---NCVHRDIAVRNILVASPECVKLGDF-GLSRYIEDEDYYKASVTRLPIKWMSPESINF 184
Query: 364 ELLTGMNPNSYVALASNEKISM--VPYFLDSIENNSFRQILNFQXXXXXXXXXXXXXXXX 421
T + A+ E +S P+F +EN +L
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFW--LENKDVIGVLEKGDRLPKPDLCPPVLYTL 242
Query: 422 XSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
++C ++RP E+ L + +++++
Sbjct: 243 MTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 273
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 79/150 (52%), Gaps = 23/150 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 81
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 134
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
++H D+ + N+L+ K++DF
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 86/204 (42%), Gaps = 44/204 (21%)
Query: 192 HCLGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEF--------LGIISQVKHKN 242
CLG GGFG V++ D+ A+K+ IR+ E + +++++H
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKR------IRLPNRELAREKVMREVKALAKLEHPG 64
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNW------------KTCLR 288
+V+ LE T + S+ + YI + + LK+W CL
Sbjct: 65 IVRYFNAWLEKNTTEKLQP--SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLH 122
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE-----T 343
I + A A+ +LHS ++H D+K +NI + KV DF + + D+E T
Sbjct: 123 IFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 344 AMSTMIR--GTVG---YLDPEYAH 362
M R G VG Y+ PE H
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIH 203
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 138
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 196 AQYVSPE 202
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 140
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 198 AQYVSPE 204
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 122
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 123 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 180 AQYVSPE 186
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 117/278 (42%), Gaps = 35/278 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+K+ A + + E L +++ V + +V +
Sbjct: 23 LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 81
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 134
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 245
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENY 453
KC I RP +E+ E ++ R + Y
Sbjct: 246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDPQRY 283
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKKY--MCADEIRITEWEFLG---IISQVKHKN 242
LG G FG VY+G + P QVAVK +C+++ E +FL IIS+ H+N
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQ---DELDFLMEALIISKFNHQN 86
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASAIH 298
+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 87 IVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQ 146
Query: 299 YLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 147 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 179
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 141
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 142 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 199 AQYVSPE 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFD----ETCTRFYTAE 140
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 198 AQYVSPE 204
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 140
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 198 AQYVSPE 204
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 194 LGMGGFGSVYKGVLPDN----TQVAVKKYMCADEIRITEWE-FLG---IISQVKHKNVVK 245
LG G FG VY+GV ++ VAVK C + + E F+ I+ + H ++VK
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKT--CKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 77
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
++G+ +E + T ++ E G L HY+ + S +VL T + + + A+ YL S+
Sbjct: 78 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESI 132
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHT 363
+ +H D+ NIL+ K+ DF L D++ +++ R + ++ PE +
Sbjct: 133 ---NCVHRDIAVRNILVASPECVKLGDF-GLSRYIEDEDYYKASVTRLPIKWMSPESINF 188
Query: 364 ELLTGMNPNSYVALASNEKISM--VPYFLDSIENNSFRQILNFQXXXXXXXXXXXXXXXX 421
T + A+ E +S P+F +EN +L
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFW--LENKDVIGVLEKGDRLPKPDLCPPVLYTL 246
Query: 422 XSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
++C ++RP E+ L + +++++
Sbjct: 247 MTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 277
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 138
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 196 AQYVSPE 202
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 138
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 196 AQYVSPE 202
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 26/168 (15%)
Query: 175 MKIFSKSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVK---KYMCADEIRITEWE 230
++I ++EL K LG G FG+VYKG+ +PD V + K + + E
Sbjct: 11 LRILKETELRKV-----KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKE 65
Query: 231 FLG---IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNW 283
L +++ V V ++LG+CL + V LV + + G L ++ + SQ L NW
Sbjct: 66 ILDEAYVMAGVGSPYVSRLLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNW 124
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
C++I A + YL + ++H D+ + N+L+ K++DF
Sbjct: 125 --CMQI----AKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDF 163
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 138
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 139 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 196 AQYVSPE 202
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 140
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 198 AQYVSPE 204
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 140
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 141 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 198 AQYVSPE 204
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 83
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H ++ + N ++ ++T K+ DF
Sbjct: 144 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDF 174
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 194 LGMGGFGSVYKGVLPD------NTQVAVKKYMCADEIRITEWEFLGIISQVKH---KNVV 244
LG G FG VY+G D T+VAVK + +R EFL S +K +VV
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR-ERIEFLNEASVMKGFTCHHVV 84
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN-------WKTCLRIAAETASAI 297
++LG+ + + TL+V E +++G L Y+ + N + +++AAE A +
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL++ +H ++ + N ++ ++T K+ DF
Sbjct: 145 AYLNA---KKFVHRNLAARNCMVAHDFTVKIGDF 175
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 84/183 (45%), Gaps = 20/183 (10%)
Query: 194 LGMGGFGSVYKG----VLP--DNTQVAVKKYM-CADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FG V+ + P D VAVK +D R +++ ++H+++VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKT--------CLRIAAETASA 296
G+C+E ++V+E++ +G L+ ++ H + ++ L IA + A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYL 356
+ Y LAS +H D+ + N L+ +N K+ DF + S D + + ++
Sbjct: 141 MVY---LASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 357 DPE 359
PE
Sbjct: 198 PPE 200
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 19 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 78
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 79 IGVITENPVWIIM-ELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLES---K 132
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 133 RFVHRDIAARNVLVSSNDCVKLGDF 157
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 143
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 144 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 201 AQYVSPE 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 74 IGVITENPVWIIM-ELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLES---K 127
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 128 RFVHRDIAARNVLVSSNDCVKLGDF 152
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 72/146 (49%), Gaps = 12/146 (8%)
Query: 192 HCLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVK 245
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK
Sbjct: 16 RCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVK 75
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
++G+ E V ++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 76 LIGVITENPV-WIIMELCTLGELRSFLQVRKFSL--DLASLILYAYQLSTALAYLES--- 129
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 119/271 (43%), Gaps = 25/271 (9%)
Query: 194 LGMGGFGSVYKGVLPDN----TQVAVKKYMCADEIRITEWE-FLG---IISQVKHKNVVK 245
LG G FG VY+GV ++ VAVK C + + E F+ I+ + H ++VK
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKT--CKKDCTLDNKEKFMSEAVIMKNLDHPHIVK 89
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
++G+ +E + T ++ E G L HY+ + S +VL T + + + A+ YL S+
Sbjct: 90 LIGI-IEEEPTWIIMELYPYGELGHYLERNKNSLKVL----TLVLYSLQICKAMAYLESI 144
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHT 363
+ +H D+ NIL+ K+ DF L D++ +++ R + ++ PE +
Sbjct: 145 ---NCVHRDIAVRNILVASPECVKLGDF-GLSRYIEDEDYYKASVTRLPIKWMSPESINF 200
Query: 364 ELLTGMNPNSYVALASNEKISM--VPYFLDSIENNSFRQILNFQXXXXXXXXXXXXXXXX 421
T + A+ E +S P+F +EN +L
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFW--LENKDVIGVLEKGDRLPKPDLCPPVLYTL 258
Query: 422 XSKCLRIRGTERPTMKEVSEELDRLRRLQEN 452
++C ++RP E+ L + +++++
Sbjct: 259 MTRCWDYDPSDRPRFTELVCSLSDVYQMEKD 289
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 83/174 (47%), Gaps = 18/174 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITE--WEFLGIISQVKHKNVVKILGLC 250
LG G +G VY G L + ++A+K+ D R ++ E + + +KHKN+V+ LG
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + E V G+LS + K + N +T + + YLH I+H
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVH 131
Query: 311 SDVKSANILLDDNYTA--KVSDFES---LVPISSDDETAMSTMIRGTVGYLDPE 359
D+K N+L+ + Y+ K+SDF + L I+ ET GT+ Y+ PE
Sbjct: 132 RDIKGDNVLI-NTYSGVLKISDFGTSKRLAGINPCTET-----FTGTLQYMAPE 179
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLES---K 130
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 137
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 138 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 195 AQYVSPE 201
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLES---K 130
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 131 RFVHRDIAARNVLVSSNDCVKLGDF 155
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 105 IGVITENPVWIIM-ELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLES---K 158
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 159 RFVHRDIAARNVLVSSNDCVKLGDF 183
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 79
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 80 IGVITENPVWIIM-ELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLES---K 133
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 134 RFVHRDIAARNVLVSSNDCVKLGDF 158
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 73/145 (50%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 22 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 81
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 82 IGVITENPVWIIM-ELCTLGELRSFLQVRKYSL--DLASLILYAYQLSTALAYLES---K 135
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ N K+ DF
Sbjct: 136 RFVHRDIAARNVLVSSNDCVKLGDF 160
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAE 292
++S++ H VK+ + + + NG L YI S +TC R AE
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFD----ETCTRFYTAE 141
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
SA+ YLH IIH D+K NILL+++ +++DF + +S + + A + GT
Sbjct: 142 IVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 353 VGYLDPE 359
Y+ PE
Sbjct: 199 AQYVSPE 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 7/167 (4%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLET 253
LG G FG V+ G ++T+VAVK E ++ ++H +V++ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 254 KVTLLVYEFVSNGALSHYIH-DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSD 312
+ ++ EF++ G+L ++ D+ +VL + +A+ A + Y+ + IH D
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEGGKVL--LPKLIDFSAQIAEGMAYIER---KNYIHRD 134
Query: 313 VKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+++AN+L+ ++ K++DF L + D+E + + + PE
Sbjct: 135 LRAANVLVSESLMCKIADF-GLARVIEDNEYTAREGAKFPIKWTAPE 180
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 22/161 (13%)
Query: 190 FHHCLGMGGFGSVYK------GVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNV 243
F +G G FG V K G+ D +K+Y D+ R E + H N+
Sbjct: 26 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNI 85
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI------ 297
+ +LG C L E+ +G L ++ + S+VL+ IA TAS +
Sbjct: 86 INLLGACEHRGYLYLAIEYAPHGNLLDFL--RKSRVLET-DPAFAIANSTASTLSSQQLL 142
Query: 298 HY-------LHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
H+ + L+ IH ++ + NIL+ +NY AK++DF
Sbjct: 143 HFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADF 183
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKY----MCADEIRITEWEFLG---I 234
E+ + T LG G G V+ G +T+VAVK M D FL +
Sbjct: 9 EVPRETLKLVERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-------FLAEANL 61
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETA 294
+ Q++H+ +V++ + + + ++ E++ NG+L ++ S L K L +AA+ A
Sbjct: 62 MKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINK-LLDMAAQIA 119
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVG 354
+ ++ + IH D+++ANIL+ D + K++DF L + D E + +
Sbjct: 120 EGMAFIEER---NYIHRDLRAANILVSDTLSCKIADF-GLARLIEDAEXTAREGAKFPIK 175
Query: 355 YLDPE 359
+ PE
Sbjct: 176 WTAPE 180
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 194 LGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G G FG V G LP ++ V K + + +FL I+ Q H NV+ +
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G+ ++ +++ EF+ NG+L ++ Q T +++ + LA +
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-----TVIQLVGMLRGIAAGMKYLADMN 155
Query: 308 IIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + NIL++ N KVSDF
Sbjct: 156 YVHRDLAARNILVNSNLVCKVSDF 179
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 18 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 77
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 78 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 134
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 135 --GTKRYIHRDLATRNILVENENRVKIGDF 162
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ + ++ + L+ ++ + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI--DHIKLLQYTSQICKGMEYL- 133
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDF 161
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 45 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 104
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 105 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 161
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 162 --GTKRYIHRDLATRNILVENENRVKIGDF 189
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 19 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 78
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 79 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 135
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 136 --GTKRYIHRDLATRNILVENENRVKIGDF 163
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 21 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 80
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 81 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 137
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 138 --GTKRYIHRDLATRNILVENENRVKIGDF 165
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 17 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 76
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 77 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 133
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 134 --GTKRYIHRDLATRNILVENENRVKIGDF 161
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 130
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDF 158
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 20 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 79
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 80 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 136
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 137 --GTKRYIHRDLATRNILVENENRVKIGDF 164
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 13 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 72
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 73 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 129
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 130 --GTKRYIHRDLATRNILVENENRVKIGDF 157
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFL--- 232
K E + F LG G FG V + G+ ++ + V M E E L
Sbjct: 25 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSE 84
Query: 233 -GIISQV-KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLK--------- 281
I+S + +H+N+V +LG C L++ E+ G L +++ K+ +L
Sbjct: 85 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDP 144
Query: 282 -----------NWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSD 330
+ L +++ A + +L AS + IH DV + N+LL + + AK+ D
Sbjct: 145 EGLDKEDGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGD 201
Query: 331 FESLVPISSDDETAMSTMIRGTVGYLDPE 359
F I +D + R V ++ PE
Sbjct: 202 FGLARDIMNDSNYIVKGNARLPVKWMAPE 230
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 130
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDF 158
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 12 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 71
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 72 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 128
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 129 --GTKRYIHRDLATRNILVENENRVKIGDF 156
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 23/150 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQ----VAVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
LG G FG+VYKG+ +P+ + VA+ + A + + E L +++ V + +V +
Sbjct: 57 LGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK-EILDEAYVMASVDNPHVCR 115
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 116 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 168
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
++H D+ + N+L+ K++DF
Sbjct: 169 DR---RLVHRDLAARNVLVKTPQHVKITDF 195
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 73
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 74 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 130
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH D+ + NIL+++ K+ DF
Sbjct: 131 --GTKRYIHRDLATRNILVENENRVKIGDF 158
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 148
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
+ IH D+ + NIL+++ K+ DF + D E
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 13/161 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 32 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 91
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 92 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 148
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
+ IH D+ + NIL+++ K+ DF + D E
Sbjct: 149 --GTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 75/148 (50%), Gaps = 18/148 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEWE----FL--GIISQ-VKHKNVV 244
+G G FG VY G D Q + CA + RITE + FL G++ + + H NV+
Sbjct: 29 IGKGHFGVVYHGEYIDQAQ---NRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 245 KILGLCLETK-VTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
++G+ L + + ++ ++ +G L +I +S Q K + + A + YL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEYL--- 140
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDF 331
A +H D+ + N +LD+++T KV+DF
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADF 168
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADEIRITEWEFL----GIISQVKHKNVVKILG 248
+G G FG+VY N++V A+KK + + +W+ + + +++H N ++ G
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 249 LCLETKVTLLVYEFVSNGALSHY-IHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
L LV E+ A +H K Q ++ IAA T A+ L L S +
Sbjct: 83 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE-------IAAVTHGALQGLAYLHSHN 135
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH DVK+ NILL + K+ DF S A + GT ++ PE
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDF------GSASIMAPANXFVGTPYWMAPE 181
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 234 IISQVK-HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE 292
I+ QV H +++ ++ + LV++ + G L Y+ +K + K ++ +R E
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLE 211
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
S +H + +I+H D+K NILLDDN ++SDF + ++ + GT
Sbjct: 212 AVSFLH------ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL---RELCGT 262
Query: 353 VGYLDPE 359
GYL PE
Sbjct: 263 PGYLAPE 269
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 120/285 (42%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQV----AVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
L G FG+VYKG+ +P+ +V A+K+ A + + E L +++ V + +V +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 88
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L++ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 89 LLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 141
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 142 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 252
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 25/183 (13%)
Query: 194 LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFLGIISQ-------VKHKNVVK 245
LG+G FG V G +VAVK + +I + +G I + +H +++K
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVK---ILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ + +V E+VS G L YI K+ ++ + K R+ + S + Y H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYIC-KNGRL--DEKESRRLFQQILSGVDYCHRHM- 136
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTEL 365
++H D+K N+LLD + AK++DF L + SD E +R + G P YA E+
Sbjct: 137 --VVHRDLKPENVLLDAHMNAKIADF-GLSNMMSDGE-----FLRXSCG--SPNYAAPEV 186
Query: 366 LTG 368
++G
Sbjct: 187 ISG 189
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 19/172 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADEIRITEWEFL----GIISQVKHKNVVKILG 248
+G G FG+VY N++V A+KK + + +W+ + + +++H N ++ G
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 249 LCLETKVTLLVYEFVSNGALSHY-IHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
L LV E+ A +H K Q ++ IAA T A+ L L S +
Sbjct: 122 CYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVE-------IAAVTHGALQGLAYLHSHN 174
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH DVK+ NILL + K+ DF S A + GT ++ PE
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDF------GSASIMAPANXFVGTPYWMAPE 220
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 81/167 (48%), Gaps = 7/167 (4%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLET 253
LG G FG V+ G ++T+VAVK E ++ ++H +V++ +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 254 KVTLLVYEFVSNGALSHYIH-DKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSD 312
+ ++ E+++ G+L ++ D+ +VL + +A+ A + Y+ + IH D
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIER---KNYIHRD 135
Query: 313 VKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+++AN+L+ ++ K++DF L + D+E + + + PE
Sbjct: 136 LRAANVLVSESLMCKIADF-GLARVIEDNEYTAREGAKFPIKWTAPE 181
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 119/285 (41%), Gaps = 35/285 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQV----AVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
L G FG+VYKG+ +P+ +V A+K+ A + + E L +++ V + +V +
Sbjct: 30 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 88
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 89 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 141
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-- 359
++H D+ + N+L+ K++DF + ++++ + + + ++ E
Sbjct: 142 DR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 360 ----YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXX 415
Y H + + + K PY D I + IL
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSK----PY--DGIPASEISSILEKGERLPQPPICT 252
Query: 416 XXXXXXXSKCLRIRGTERPTMKEVSEELDRLRRLQENYWARKNNE 460
KC I RP +E+ E ++ R + Y + +E
Sbjct: 253 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDE 297
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 78/150 (52%), Gaps = 23/150 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQV----AVKKYMCADEIRITEWEFLG---IISQVKHKNVVK 245
L G FG+VYKG+ +P+ +V A+K+ A + + E L +++ V + +V +
Sbjct: 23 LSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK-EILDEAYVMASVDNPHVCR 81
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIAAETASAIHYLH 301
+LG+CL + V L+ + + G L Y+ + SQ L NW C++I A ++YL
Sbjct: 82 LLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW--CVQI----AKGMNYLE 134
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
++H D+ + N+L+ K++DF
Sbjct: 135 DR---RLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 14/140 (10%)
Query: 190 FHHCLGMGGFGSVYKGV---LPDNTQV----AVKKYMCADEIRITE--WEFLGIISQVKH 240
F+ LG G F ++KGV + D Q+ + K + +E +E ++S++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYL 300
K++V G+C+ +LV EFV G+L Y+ + + WK L +A + A+A+H+L
Sbjct: 72 KHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAAAMHFL 129
Query: 301 HSLASPSIIHSDVKSANILL 320
++IH +V + NILL
Sbjct: 130 E---ENTLIHGNVCAKNILL 146
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 71/158 (44%), Gaps = 28/158 (17%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVKK----YMCADEIRITEWEFLG---IISQVKH 240
LG G FG VY+G + P QVAVK Y DE+ +FL IIS+ H
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDEL-----DFLMEALIISKFNH 107
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC----LRIAAETASA 296
+N+V+ +G+ L++ ++ E ++ G L ++ + + + L +A + A
Sbjct: 108 QNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACG 167
Query: 297 IHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDF 331
YL IH D+ + N LL AK+ DF
Sbjct: 168 CQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDF 202
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 16/177 (9%)
Query: 194 LGMGGFGSVYKGVLPD-NTQVAVKKYMCADEIRITEWEF----LGIISQVKHKNVVKI-- 246
LG GGFG V + + D QVA+K+ C E+ E + I+ ++ H NVV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQ--CRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 247 ----LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
L + LL E+ G L Y++ + + ++ +SA+ YLH
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 140
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IIH D+K NI+L + L D+ + T GT+ YL PE
Sbjct: 141 ---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 194
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 457 IGVITENPVWIIM-ELCTLGELRSFLQVRKFSL--DLASLILYAYQLSTALAYLES---K 510
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ K+ DF
Sbjct: 511 RFVHRDIAARNVLVSATDCVKLGDF 535
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 74/177 (41%), Gaps = 16/177 (9%)
Query: 194 LGMGGFGSVYKGVLPD-NTQVAVKKYMCADEIRITEWEF----LGIISQVKHKNVVKI-- 246
LG GGFG V + + D QVA+K+ C E+ E + I+ ++ H NVV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQ--CRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 247 ----LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
L + LL E+ G L Y++ + + ++ +SA+ YLH
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE 139
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IIH D+K NI+L + L D+ + T GT+ YL PE
Sbjct: 140 ---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPE 193
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 234 IISQVKHKNVVKILGLCLE--TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
I+ + H+N+VK G+C E L+ EF+ +G+L Y+ +++ N K L+ A
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAV 133
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
+ + YL S +H D+ + N+L++ + K+ DF I +D E
Sbjct: 134 QICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 181
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 234 IISQVKHKNVVKILGLCLE--TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
I+ + H+N+VK G+C E L+ EF+ +G+L Y+ +++ N K L+ A
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKI--NLKQQLKYAV 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
+ + YL S +H D+ + N+L++ + K+ DF I +D E
Sbjct: 122 QICKGMDYL---GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE 169
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYIT-ELANALSYCHS---KRV 133
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL N K++DF V S T + GT+ YL PE
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 180
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 13/150 (8%)
Query: 190 FHHCLGMGGFGSV---YKGVLPDNTQ--VAVKKYMCADEIRITEWEF-LGIISQVKHKNV 243
F LG G FGSV L DNT VAVKK + E + ++E + I+ ++H N+
Sbjct: 15 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNI 74
Query: 244 VKILGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
VK G+C + L+ E++ G+L Y+ ++ + L+ ++ + YL
Sbjct: 75 VKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI--DHIKLLQYTSQICKGMEYL- 131
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ IH ++ + NIL+++ K+ DF
Sbjct: 132 --GTKRYIHRNLATRNILVENENRVKIGDF 159
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 194 LGMGGFGSVYKG----VLPDNTQVAVKKYMCADEIRITEWEF---LGIISQVKHKNVVKI 246
LG G FG V+ + P ++ V D +F +++ ++H+++VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKT-----------CLRIAAET 293
G+C + ++V+E++ +G L+ ++ H + +L + + L IA++
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
AS + Y LAS +H D+ + N L+ N K+ DF + S D + +
Sbjct: 143 ASGMVY---LASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 354 GYLDPE 359
++ PE
Sbjct: 200 RWMPPE 205
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + N LG G FG V + + A + + ++ T E ++S
Sbjct: 20 SKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 79
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL------KN 282
++K H NVV +LG C + L+V EF G LS Y+ K ++ + K+
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 283 WKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
+ T + + + LAS IH D+ + NILL + K+ DF I D +
Sbjct: 140 FLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 343 TAMSTMIRGTVGYLDPE 359
R + ++ PE
Sbjct: 200 YVRKGDARLPLKWMAPE 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 21/163 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITE---WEFLGIISQVKHKNVVKILGL 249
+G G +G V K D + VA+KK++ +D+ ++ + + ++ Q++H+N+V +L +
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 250 CLETKVTLLVYEFVSNGALSH---YIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
C + K LV+EFV + L + + QV++ + + + I + H S
Sbjct: 93 CKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKY------LFQIINGIGFCH---SH 143
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISS-----DDETA 344
+IIH D+K NIL+ + K+ DF +++ DDE A
Sbjct: 144 NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVA 186
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 82/197 (41%), Gaps = 16/197 (8%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + N LG G FG V + + A + + ++ T E ++S
Sbjct: 20 SKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 79
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL------KN 282
++K H NVV +LG C + L+V EF G LS Y+ K ++ + K+
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKD 139
Query: 283 WKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
+ T + + + LAS IH D+ + NILL + K+ DF I D +
Sbjct: 140 FLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 343 TAMSTMIRGTVGYLDPE 359
R + ++ PE
Sbjct: 200 YVRKGDARLPLKWMAPE 216
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 72/145 (49%), Gaps = 12/145 (8%)
Query: 193 CLGMGGFGSVYKGVL--PDNTQVAVKKYMC----ADEIRITEWEFLGIISQVKHKNVVKI 246
C+G G FG V++G+ P+N +AV C +D +R + + Q H ++VK+
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+G+ E V +++ E + G L ++ + + + + + A + ++A+ YL S
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFLQVRKFSL--DLASLILYAYQLSTALAYLES---K 130
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+H D+ + N+L+ K+ DF
Sbjct: 131 RFVHRDIAARNVLVSATDCVKLGDF 155
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 89/191 (46%), Gaps = 28/191 (14%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVY---KGVLPDNTQVAVKKYM------CADEIRITEW 229
S ELLK LG G FG V+ K PD+ + K + D +R T+
Sbjct: 28 SHFELLK-------VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVR-TKM 79
Query: 230 EFLGIISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
E I++ V H VVK L +T+ L L+ +F+ G L + S +V+ +
Sbjct: 80 E-RDILADVNHPFVVK-LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 134
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
AE A + +LHSL II+ D+K NILLD+ K++DF L + D E +
Sbjct: 135 YLAELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDF-GLSKEAIDHEKKAYSF 190
Query: 349 IRGTVGYLDPE 359
GTV Y+ PE
Sbjct: 191 C-GTVEYMAPE 200
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 19/200 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + N LG G FG V + + A + + ++ T E ++S
Sbjct: 21 SKWEFPRDRLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 80
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 81 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDL 140
Query: 281 -KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISS 339
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 141 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 340 DDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 201 DPDXVRKGDARLPLKWMAPE 220
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 32/167 (19%)
Query: 194 LGMGGFGSVYK----GVLP--DNTQVAVK--KYMCADEIRITEWEFLGIISQVKHKNVVK 245
+G G FG V++ G+LP T VAVK K + +++ ++++ + N+VK
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWK------------------TC- 286
+LG+C K L++E+++ G L+ ++ S + + +C
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 287 --LRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
L IA + A+ + Y L+ +H D+ + N L+ +N K++DF
Sbjct: 175 EQLCIARQVAAGMAY---LSERKFVHRDLATRNCLVGENMVVKIADF 218
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 14/140 (10%)
Query: 190 FHHCLGMGGFGSVYKGV---LPDNTQV----AVKKYMCADEIRITE--WEFLGIISQVKH 240
F+ LG G F ++KGV + D Q+ + K + +E +E ++S++ H
Sbjct: 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSH 71
Query: 241 KNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYL 300
K++V G+C +LV EFV G+L Y+ + + WK L +A + A A+H+L
Sbjct: 72 KHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWK--LEVAKQLAWAMHFL 129
Query: 301 HSLASPSIIHSDVKSANILL 320
++IH +V + NILL
Sbjct: 130 E---ENTLIHGNVCAKNILL 146
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEIXINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 194 LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFLGIISQ-------VKHKNVVK 245
LG+G FG V G +VAVK + +I + +G I + +H +++K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVK---ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
+ + +V E+VS G L YI H + ++ R+ + SA+ Y H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCHRH 130
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHT 363
++H D+K N+LLD + AK++DF L + SD E +R + G P YA
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADF-GLSNMMSDGE-----FLRDSCG--SPNYAAP 179
Query: 364 ELLTG 368
E+++G
Sbjct: 180 EVISG 184
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEIXINKMLNHENVVKF 70
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + R + + + YLH +
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLHGIG-- 125
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 177
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 86/185 (46%), Gaps = 29/185 (15%)
Query: 194 LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFLGIISQ-------VKHKNVVK 245
LG+G FG V G +VAVK + +I + +G I + +H +++K
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVK---ILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIK 75
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
+ + +V E+VS G L YI H + ++ R+ + SA+ Y H
Sbjct: 76 LYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EARRLFQQILSAVDYCHRH 130
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHT 363
++H D+K N+LLD + AK++DF L + SD E +R + G P YA
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADF-GLSNMMSDGE-----FLRTSCG--SPNYAAP 179
Query: 364 ELLTG 368
E+++G
Sbjct: 180 EVISG 184
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 134
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 181
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 172 FSRMKIFSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF 231
F + K + + K T + LG GGFG V + K Y C + +
Sbjct: 170 FLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCAC----QVRATGKMYACKKLEKKRIKKR 225
Query: 232 LG---------IISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLK 281
G I+ +V + VV L ETK L LV ++ G L +I+
Sbjct: 226 KGEAMALNEKQILEKVNSRFVVS-LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 282 NWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDD 341
+ AAE + LH I++ D+K NILLDD+ ++SD V + +
Sbjct: 285 EARAVF-YAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEG 339
Query: 342 ETAMSTMIRGTVGYLDPEYAHTELLT 367
+T + GTVGY+ PE E T
Sbjct: 340 QTIKGRV--GTVGYMAPEVVKNERYT 363
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY ++ + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
++ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KKV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S A+ GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPE 176
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
C+G G +G V++G VAVK + DE R TE L ++H+N++ +
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETE---LYNTVMLRHENILGFIAS 70
Query: 250 CLETKVT----LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH---- 301
+ ++ + L+ + G+L Y+ + + +CLRI AS + +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIF 126
Query: 302 -SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIR-GTVGYLDP 358
+ P+I H D+KS NIL+ N ++D V S S ++ + R GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 359 E 359
E
Sbjct: 187 E 187
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 11/144 (7%)
Query: 194 LGMGGFGSVYKG--VLPDNTQVAVK-KYMCADEIRITEWEFLG---IISQVKHKNVVKIL 247
+G G FG V G LP ++ V K + + +FL I+ Q H NV+ +
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G+ ++ +++ EF+ NG+L ++ Q T +++ + LA +
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQF-----TVIQLVGMLRGIAAGMKYLADMN 129
Query: 308 IIHSDVKSANILLDDNYTAKVSDF 331
+H + + NIL++ N KVSDF
Sbjct: 130 YVHRALAARNILVNSNLVCKVSDF 153
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
C+G G +G V++G VAVK + DE R TE L ++H+N++ +
Sbjct: 15 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETE---LYNTVMLRHENILGFIAS 70
Query: 250 CLETKVT----LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH---- 301
+ ++ + L+ + G+L Y+ + + +CLRI AS + +LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIF 126
Query: 302 -SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIR-GTVGYLDP 358
+ P+I H D+KS NIL+ N ++D V S S ++ + R GT Y+ P
Sbjct: 127 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 186
Query: 359 E 359
E
Sbjct: 187 E 187
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 194 LGMGGFGSVYKGVL---PDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKIL 247
LG G FGSV +GV VA+K E TE E + I+ Q+ + +V+++
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLI 76
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G+C + + +LV E G L ++ K ++ + + + + + YL +
Sbjct: 77 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEE---KN 130
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDD 341
+H D+ + N+LL + + AK+SDF + +DD
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFLGII 235
K E + +F LG G FG V + G++ + + V M +TE E ++
Sbjct: 33 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE--ALM 90
Query: 236 SQVK-------HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
S++K H N+V +LG C TL++ E+ G L +++ K
Sbjct: 91 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF--------- 141
Query: 289 IAAETASAIHY---------------------LHSLASPSIIHSDVKSANILLDDNYTAK 327
I ++T+ AI + LAS + IH D+ + NILL K
Sbjct: 142 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 201
Query: 328 VSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ DF I +D + R V ++ PE
Sbjct: 202 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 233
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 98/235 (41%), Gaps = 27/235 (11%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF---LGIIS 236
++E +K F LG G F V ++ K + ++ E + ++
Sbjct: 16 QAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLR 75
Query: 237 QVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
++KH+N+V + + LV + VS G L I +K K+ T +R + A
Sbjct: 76 KIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIR---QVLDA 132
Query: 297 IHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
++YLH + I+H D+K N+L D+ +SDF L + + MST GT
Sbjct: 133 VYYLHRMG---IVHRDLKPENLLYYSQDEESKIMISDF-GLSKMEGKGDV-MSTAC-GTP 186
Query: 354 GYLDPE------YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQIL 402
GY+ PE Y+ + +Y+ L P F D ++ F QIL
Sbjct: 187 GYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG------YPPFYDENDSKLFEQIL 235
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 83/206 (40%), Gaps = 22/206 (10%)
Query: 172 FSRMKIFSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF 231
F + K + + K T + LG GGFG V + K Y C + +
Sbjct: 170 FLQWKWLERQPVTKNTFRQYRVLGKGGFGEVCAC----QVRATGKMYACKKLEKKRIKKR 225
Query: 232 LG---------IISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLK 281
G I+ +V + VV L ETK L LV ++ G L +I+
Sbjct: 226 KGEAMALNEKQILEKVNSRFVVS-LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP 284
Query: 282 NWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDD 341
+ AAE + LH I++ D+K NILLDD+ ++SD V + +
Sbjct: 285 EARAVF-YAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHV-PEG 339
Query: 342 ETAMSTMIRGTVGYLDPEYAHTELLT 367
+T + GTVGY+ PE E T
Sbjct: 340 QTIKGRV--GTVGYMAPEVVKNERYT 363
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY N + K + ++ E + I S ++H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ K L+ EF G L + + T + E A A+HY H +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---EELADALHYCHER---KV 135
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+L+ K++DF V S M GT+ YL PE
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPE 182
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY N + K + ++ E + I S ++H N++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ K L+ EF G L + + T + E A A+HY H +
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---EELADALHYCHER---KV 135
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+L+ K++DF V S M GT+ YL PE
Sbjct: 136 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPE 182
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 88/223 (39%), Gaps = 51/223 (22%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQV------KHKNVVKI 246
LG G FG V K +Y +IR TE + I+S+V H+ VV+
Sbjct: 13 VLGQGAFGQVVKA-----RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 247 LGLCLE------------TKVTLLV-YEFVSNGALSHYIHDKS--SQVLKNWKTCLRIAA 291
LE K TL + E+ NG L IH ++ Q + W R+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE---------SLVPISSDDE 342
+ A+ Y+HS IIH D+K NI +D++ K+ DF ++ + S +
Sbjct: 124 QILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 343 TAMSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISM 385
S + +G Y TE+L G NEKI M
Sbjct: 181 PGSSDNLTSAIG--TAMYVATEVLDGTG-------HYNEKIDM 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY N + K + ++ E + I S ++H N++++
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ K L+ EF G L + + T + E A A+HY H +
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM---EELADALHYCHER---KV 136
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+L+ K++DF V S M GT+ YL PE
Sbjct: 137 IHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC----GTLDYLPPE 183
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFLGII 235
K E + +F LG G FG V + G++ + + V M +TE E ++
Sbjct: 35 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE--ALM 92
Query: 236 SQVK-------HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
S++K H N+V +LG C TL++ E+ G L +++ K
Sbjct: 93 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF--------- 143
Query: 289 IAAETASAIHY---------------------LHSLASPSIIHSDVKSANILLDDNYTAK 327
I ++T+ AI + LAS + IH D+ + NILL K
Sbjct: 144 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 203
Query: 328 VSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ DF I +D + R V ++ PE
Sbjct: 204 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 235
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 93 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 146
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 147 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 193
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVY---KGVLPDNTQVAVKKYM------CADEIRITEW 229
S+ ELLK LG G FG V+ K D Q+ K + D +R T+
Sbjct: 24 SQFELLK-------VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 75
Query: 230 EFLGIISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
E I+ +V H +VK L +T+ L L+ +F+ G L + S +V+ +
Sbjct: 76 E-RDILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 130
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
AE A A+ +LHSL II+ D+K NILLD+ K++DF L S D E +
Sbjct: 131 YLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDF-GLSKESIDHEKKAYSF 186
Query: 349 IRGTVGYLDPE 359
GTV Y+ PE
Sbjct: 187 C-GTVEYMAPE 196
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFLGII 235
K E + +F LG G FG V + G++ + + V M +TE E ++
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE--ALM 97
Query: 236 SQVK-------HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
S++K H N+V +LG C TL++ E+ G L +++ K
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF--------- 148
Query: 289 IAAETASAIHY---------------------LHSLASPSIIHSDVKSANILLDDNYTAK 327
I ++T+ AI + LAS + IH D+ + NILL K
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 208
Query: 328 VSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ DF I +D + R V ++ PE
Sbjct: 209 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 240
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + + H+NVVK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINAMLNHENVVKF 70
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 125
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 132
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 179
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHSK---RV 155
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 202
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 130
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF S ++ T + GT+ YL PE
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFG----WSCHAPSSRRTTLSGTLDYLPPE 177
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFLGII 235
K E + +F LG G FG V + G++ + + V M +TE E ++
Sbjct: 17 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE--ALM 74
Query: 236 SQVK-------HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
S++K H N+V +LG C TL++ E+ G L +++ K
Sbjct: 75 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF--------- 125
Query: 289 IAAETASAIHY---------------------LHSLASPSIIHSDVKSANILLDDNYTAK 327
I ++T+ AI + LAS + IH D+ + NILL K
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 185
Query: 328 VSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ DF I +D + R V ++ PE
Sbjct: 186 ICDFGLARDIKNDSNYVVKGNARLPVKWMAPE 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEIXINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 68
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 69 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 123
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 175
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 20/218 (9%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCAD-EIRITEWEFLG----IISQVKHKNVVKIL 247
LG G FG V+ N + K + + +R+ + E ++S V H ++++
Sbjct: 13 TLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMW 72
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G + + ++ +++ G L + + SQ N AAE A+ YLHS
Sbjct: 73 GTFQDAQQIFMIMDYIEGGELFSLL--RKSQRFPN-PVAKFYAAEVCLALEYLHS---KD 126
Query: 308 IIHSDVKSANILLDDNYTAKVSD--FESLVPISSDDETAMSTMIRGTVGYLDPEYAHTEL 365
II+ D+K NILLD N K++D F VP ++ + GT Y+ PE T+
Sbjct: 127 IIYRDLKPENILLDKNGHIKITDFGFAKYVP-------DVTYXLCGTPDYIAPEVVSTKP 179
Query: 366 LTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQILN 403
+ E ++ F DS ++ +ILN
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN 217
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 84/212 (39%), Gaps = 43/212 (20%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFLGII 235
K E + +F LG G FG V + G++ + + V M +TE E ++
Sbjct: 40 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTERE--ALM 97
Query: 236 SQVK-------HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
S++K H N+V +LG C TL++ E+ G L +++ K
Sbjct: 98 SELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF--------- 148
Query: 289 IAAETASAIHY---------------------LHSLASPSIIHSDVKSANILLDDNYTAK 327
I ++T+ AI + LAS + IH D+ + NILL K
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITK 208
Query: 328 VSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ DF I +D + R V ++ PE
Sbjct: 209 ICDFGLARHIKNDSNYVVKGNARLPVKWMAPE 240
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 132
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 179
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 29/184 (15%)
Query: 194 LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G GGFG V+K D +K+ +E E + ++++ H N+V G C +
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE---VKALAKLDHVNIVHYNG-CWD 74
Query: 253 -----------------TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETAS 295
TK + EF G L +I + + L L + +
Sbjct: 75 GFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV-LALELFEQITK 133
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGY 355
+ Y+HS +I+ D+K +NI L D K+ DF + + +D + S +GT+ Y
Sbjct: 134 GVDYIHS---KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRS---KGTLRY 187
Query: 356 LDPE 359
+ PE
Sbjct: 188 MSPE 191
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVY---KGVLPDNTQVAVKKYM------CADEIRITEW 229
S+ ELLK LG G FG V+ K D Q+ K + D +R T+
Sbjct: 25 SQFELLK-------VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 76
Query: 230 EFLGIISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
E I+ +V H +VK L +T+ L L+ +F+ G L + S +V+ +
Sbjct: 77 E-RDILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 131
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
AE A A+ +LHSL II+ D+K NILLD+ K++DF L S D E +
Sbjct: 132 YLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDF-GLSKESIDHEKKAYSF 187
Query: 349 IRGTVGYLDPE 359
GTV Y+ PE
Sbjct: 188 C-GTVEYMAPE 197
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 134
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 181
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYIT-ELANALSYCHS---KRV 133
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL N K++DF V S + GT+ YL PE
Sbjct: 134 IHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPE 180
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 176
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKY----MCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G G+VY + + +VA+++ E+ I E + ++ + K+ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLD 84
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCL---RIAAETASAIHYLHSLAS 305
L +V E+++ G+L+ + + TC+ +IAA + L L S
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDEGQIAAVCRECLQALEFLHS 134
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH D+KS NILL + + K++DF I+ +++ STM+ GT ++ PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMV-GTPYWMAPE 186
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 70
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 125
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 74/176 (42%), Gaps = 19/176 (10%)
Query: 197 GGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKIL-----GLCL 251
G FG V+K L N VAVK + D+ + +KH+N+++ + G L
Sbjct: 26 GRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSNL 84
Query: 252 ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS------ 305
E ++ L+ F G+L+ Y+ + W +A + + YLH
Sbjct: 85 EVEL-WLITAFHDKGSLTDYLKGN----IITWNELCHVAETMSRGLSYLHEDVPWCRGEG 139
Query: 306 --PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
PSI H D KS N+LL + TA ++DF V + GT Y+ PE
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE 195
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 90/191 (47%), Gaps = 28/191 (14%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVY---KGVLPDNTQVAVKKYM------CADEIRITEW 229
S+ ELLK LG G FG V+ K D Q+ K + D +R T+
Sbjct: 24 SQFELLK-------VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 75
Query: 230 EFLGIISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
E I+ +V H +VK L +T+ L L+ +F+ G L + S +V+ +
Sbjct: 76 E-RDILVEVNHPFIVK-LHYAFQTEGKLYLILDFLRGGDLFTRL---SKEVMFTEEDVKF 130
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
AE A A+ +LHSL II+ D+K NILLD+ K++DF L S D E +
Sbjct: 131 YLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDF-GLSKESIDHEKKAYSF 186
Query: 349 IRGTVGYLDPE 359
GTV Y+ PE
Sbjct: 187 C-GTVEYMAPE 196
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 134
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 181
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM-------CADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V + K + C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S A+ GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPE 176
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 75 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 128
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 129 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 175
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 22/181 (12%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
C+G G +G V++G VAVK + DE R TE L ++H+N++ +
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSRDEKSWFRETE---LYNTVMLRHENILGFIAS 99
Query: 250 CLETKVT----LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH---- 301
+ ++ + L+ + G+L Y+ + + +CLRI AS + +LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTV----SCLRIVLSIASGLAHLHIEIF 155
Query: 302 -SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIR-GTVGYLDP 358
+ P+I H D+KS NIL+ N ++D V S S ++ + R GT Y+ P
Sbjct: 156 GTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAP 215
Query: 359 E 359
E
Sbjct: 216 E 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM-------CADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V + K + C + I+ + + I + H+NVVK
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 70
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 71 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 125
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 177
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 132
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S A+ GT+ YL PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPE 179
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 80 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 133
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 134 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 180
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I + H+NVVK G E + L E+ S G L I + + R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQL 113
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+ + YLH + I H D+K N+LLD+ K+SDF ++ + + GT+
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 171 PYVAPE 176
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I + H+NVVK G E + L E+ S G L I + + R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQL 114
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+ + YLH + I H D+K N+LLD+ K+SDF ++ + + GT+
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 172 PYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I + H+NVVK G E + L E+ S G L I + + R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQL 114
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+ + YLH + I H D+K N+LLD+ K+SDF ++ + + GT+
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 172 PYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 6/126 (4%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I + H+NVVK G E + L E+ S G L I + + R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQL 114
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+ + YLH + I H D+K N+LLD+ K+SDF ++ + + GT+
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 172 PYVAPE 177
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I + H+NVVK G E + L E+ S G L I + R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQL 114
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+ + YLH + I H D+K N+LLD+ K+SDF ++ + + GT+
Sbjct: 115 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 171
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 172 PYVAPE 177
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
H N++++ LV++ + G L Y+ +K + K + +R E A+H
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
L +I+H D+K NILLDD+ K++DF + ++ + GT YL PE
Sbjct: 130 L------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---REVCGTPSYLAPE 180
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC----GTLDYLPPE 176
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 72/173 (41%), Gaps = 17/173 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK------KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G +G V V VAVK C + I+ + + I + H+NVVK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK----KEICINKMLNHENVVKF 69
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G E + L E+ S G L I + + R + + + YLH +
Sbjct: 70 YGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQ---RFFHQLMAGVVYLHGIG-- 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I H D+K N+LLD+ K+SDF ++ + + GT+ Y+ PE
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPE 176
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 18/199 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 22 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMS 81
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLY 141
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSD 340
K++ T + + + LAS IH D+ + NILL + K+ DF I D
Sbjct: 142 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 341 DETAMSTMIRGTVGYLDPE 359
+ R + ++ PE
Sbjct: 202 PDXVRKGDARLPLKWMAPE 220
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLC----GTLDYLPPE 176
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 6/126 (4%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I + H+NVVK G E + L E+ S G L I + R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD---AQRFFHQL 113
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
+ + YLH + I H D+K N+LLD+ K+SDF ++ + + GT+
Sbjct: 114 MAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTL 170
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 171 PYVAPE 176
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K L+ E+ S G + Y+ K ++ R +
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QI 123
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E + +
Sbjct: 124 VSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADF------GFSNEFTVGGKLDAFC 174
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 175 G--APPYAAPELFQG 187
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 33/187 (17%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G V+K D Q VA+KK++ +++ I+ + ++ Q+KH N+V +L +
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 250 CLETKVTLLVYEFVSNGAL---SHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+ LV+E+ + L Y ++K+ I +T A+++ H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS------ITWQTLQAVNFCHKH--- 121
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE-----YA 361
+ IH DVK NIL+ + K+ DF + ++ G Y D E Y
Sbjct: 122 NCIHRDVKPENILITKHSVIKLCDF------------GFARLLTGPSDYYDDEVATRWYR 169
Query: 362 HTELLTG 368
ELL G
Sbjct: 170 SPELLVG 176
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 88/180 (48%), Gaps = 22/180 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQ---VKHKNVVKILGLC 250
+G G +G V+ G +VAVK + +E W I Q ++H+N++ +
Sbjct: 45 IGKGRYGEVWMGKW-RGEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAAD 100
Query: 251 LETKVT----LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS---- 302
++ + L+ ++ NG+L Y+ KS+ + + K+ L++A + S + +LH+
Sbjct: 101 IKGTGSWTQLYLITDYHENGSLYDYL--KSTTL--DAKSMLKLAYSSVSGLCHLHTEIFS 156
Query: 303 -LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSD-DETAMSTMIR-GTVGYLDPE 359
P+I H D+KS NIL+ N T ++D V SD +E + R GT Y+ PE
Sbjct: 157 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPE 216
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
H N++++ LV++ + G L Y+ +K + K + +R E A+H
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
L +I+H D+K NILLDD+ K++DF + ++ + GT YL PE
Sbjct: 143 L------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---RSVCGTPSYLAPE 193
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + K + ++ E + I S ++H N++++ G
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 126
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 127 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC----GTLDYLPPE 173
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 67 IMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QI 123
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E + +
Sbjct: 124 VSAVQYCHQ---KYIVHRDLKAENLLLDGDMNIKIADF------GFSNEFTVGNKLDTFC 174
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 175 G--SPPYAAPELFQG 187
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QI 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E +
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDAFC 173
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 174 G--APPYAAPELFQG 186
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
H N++++ LV++ + G L Y+ +K + K + +R E A+H
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 142
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
L +I+H D+K NILLDD+ K++DF + ++ + GT YL PE
Sbjct: 143 L------NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL---REVCGTPSYLAPE 193
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 176
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 176
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 130
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 177
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K L+ E+ S G + Y+ K ++ R +
Sbjct: 64 IMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR---QI 120
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E + +
Sbjct: 121 VSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADF------GFSNEFTVGGKLDTFC 171
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 172 G--SPPYAAPELFQG 184
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 81 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 134
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S T + GT+ YL PE
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLC----GTLDYLPPE 181
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QI 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E +
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDTFC 173
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 174 G--SPPYAAPELFQG 186
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QI 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E +
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDTFC 173
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 174 G--SPPYAAPELFQG 186
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QI 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E +
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDTFC 173
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 174 G--SPPYAAPELFQG 186
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 252 ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
+TK + EF G L +I + + L L + + + Y+HS +IH
Sbjct: 105 KTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKV-LALELFEQITKGVDYIHS---KKLIHR 160
Query: 312 DVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+K +NI L D K+ DF + + +D T +GT+ Y+ PE
Sbjct: 161 DLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKRTRSKGTLRYMSPE 205
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 134
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S + + GT+ YL PE
Sbjct: 135 IHRDIKPENLLLGSAGELKIADFGWSVHAPS----SRRXXLXGTLDYLPPE 181
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 66 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR---QI 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E +
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDEFC 173
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 174 G--SPPYAAPELFQG 186
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 36/211 (17%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYK----GVLPDNTQVAVKKYMCADEIRITEWEFLGII 235
K E + F LG G FG V G+ + V M ++ +E E ++
Sbjct: 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSERE--ALM 96
Query: 236 SQVK-------HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKN------ 282
S++K H+N+V +LG C + L++E+ G L +Y+ K + ++
Sbjct: 97 SELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYEN 156
Query: 283 --------------WKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKV 328
++ L A + A + +L S +H D+ + N+L+ K+
Sbjct: 157 QKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLAARNVLVTHGKVVKI 213
Query: 329 SDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
DF I SD + R V ++ PE
Sbjct: 214 CDFGLARDIMSDSNYVVRGNARLPVKWMAPE 244
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 77/180 (42%), Gaps = 20/180 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG V Q K++ ++ ++ + + ++H +++K+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ ++V E+ + G L YI +K + R + AI Y H I
Sbjct: 77 VITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGR---RFFQQIICAIEYCHR---HKI 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTG 368
+H D+K N+LLDDN K++DF L I +D ++ + G P YA E++ G
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADF-GLSNIMTD-----GNFLKTSCG--SPNYAAPEVING 181
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 237 QVK-------HKNVVKILGLCLETKVTLLVY-EFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 191 KDPDXVRKGDARLPLKWMAPE 211
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 191 KDPDXVRKGDARLPLKWMAPE 211
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 75/153 (49%), Gaps = 18/153 (11%)
Query: 194 LGMGGFGSVYKGVLP--DNT--QVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKI 246
LG G FGSV +G L D T +VAVK + + EFL + H NV+++
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 247 LGLCLETKV-----TLLVYEFVSNGALSHYI-HDKSSQVLKN--WKTCLRIAAETASAIH 298
LG+C+E +++ F+ G L Y+ + + K+ +T L+ + A +
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
YL ++ + +H D+ + N +L D+ T V+DF
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADF 191
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 192 HCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQV------KHKNVVK 245
+ +G G +G K + ++ V K + D +TE E ++S+V KH N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKEL--DYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 246 ILGLCLE-TKVTL-LVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYLH 301
++ T TL +V E+ G L+ I K Q L + + LR+ + A+ H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL-DEEFVLRVMTQLTLALKECH 128
Query: 302 --SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
S +++H D+K AN+ LD K+ DF L I + D + T + GT Y+ PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF-GLARILNHDTSFAKTFV-GTPYYMSPE 186
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 200 KDPDXVRKGDARLPLKWMAPE 220
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 131
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K+++F V S T + GT+ YL PE
Sbjct: 132 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPE 178
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 132
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K+++F V S T + GT+ YL PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC----GTLDYLPPE 179
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR---QI 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E +
Sbjct: 123 VSAVQYCHQ---KFIVHRDLKAENLLLDADXNIKIADF------GFSNEFTFGNKLDAFC 173
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 174 G--APPYAAPELFQG 186
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 26/154 (16%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G FG V+K Q VA+KK + +E IT + I+ +KH+NVV ++ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 250 CLETKVT---------LLVYEFVSN---GALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
C TK + LV++F + G LS+ + + +K R+ + +
Sbjct: 86 C-RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------RVMQMLLNGL 138
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+Y+H I+H D+K+AN+L+ + K++DF
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADF 169
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 69/175 (39%), Gaps = 16/175 (9%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM--CADEIRITEWEFLGIISQVKHKNVVKILGLCL 251
+G G +G VYKG Q+A K M DE + E + H+N+ G +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 252 ETKVT------LLVYEFVSNGALSHYIHDKSSQVLKN-WKTCLRIAAETASAIHYLHSLA 304
+ LV EF G+++ I + LK W I E + +LH
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW--IAYICREILRGLSHLHQH- 148
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH D+K N+LL +N K+ DF V D GT ++ PE
Sbjct: 149 --KVIHRDIKGQNVLLTENAEVKLVDFG--VSAQLDRTVGRRNTFIGTPYWMAPE 199
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 57/135 (42%), Gaps = 14/135 (10%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ + H N+VK+ + K LV E+ S G + Y+ K + R +
Sbjct: 59 IMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR---QI 115
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
SA+ Y H I+H D+K+ N+LLD + K++DF +E +
Sbjct: 116 VSAVQYCHQ---KFIVHRDLKAENLLLDADMNIKIADF------GFSNEFTFGNKLDTFC 166
Query: 354 GYLDPEYAHTELLTG 368
G P YA EL G
Sbjct: 167 G--SPPYAAPELFQG 179
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 102 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHSK---RV 155
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLV--PISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V P S D+ GT+ YL PE
Sbjct: 156 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPE 202
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 78 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 131
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S + GT+ YL PE
Sbjct: 132 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPE 178
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 86/174 (49%), Gaps = 23/174 (13%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKY----MCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G G+VY + + +VA+++ E+ I E + ++ + K+ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLD 85
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCL---RIAAETASAIHYLHSLAS 305
L +V E+++ G+L+ + + TC+ +IAA + L L S
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDEGQIAAVCRECLQALEFLHS 135
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH ++KS NILL + + K++DF I+ +++ STM+ GT ++ PE
Sbjct: 136 NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSTMV-GTPYWMAPE 187
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKY----MCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G G+VY + + +VA+++ E+ I E + ++ + K+ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLD 84
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCL---RIAAETASAIHYLHSLAS 305
L +V E+++ G+L+ + + TC+ +IAA + L L S
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDEGQIAAVCRECLQALEFLHS 134
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH D+KS NILL + + K++DF I+ +++ S M+ GT ++ PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMV-GTPYWMAPE 186
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKY----MCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G G+VY + + +VA+++ E+ I E + ++ + K+ N+V L
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLD 85
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCL---RIAAETASAIHYLHSLAS 305
L +V E+++ G+L+ + + TC+ +IAA + L L S
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDEGQIAAVCRECLQALEFLHS 135
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH D+KS NILL + + K++DF I+ +++ S M+ GT ++ PE
Sbjct: 136 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSXMV-GTPYWMAPE 187
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 26/154 (16%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G FG V+K Q VA+KK + +E IT + I+ +KH+NVV ++ +
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 84
Query: 250 CLETKVT---------LLVYEFVSN---GALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
C TK + LV++F + G LS+ + + +K R+ + +
Sbjct: 85 C-RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------RVMQMLLNGL 137
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+Y+H I+H D+K+AN+L+ + K++DF
Sbjct: 138 YYIHR---NKILHRDMKAANVLITRDGVLKLADF 168
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 83/180 (46%), Gaps = 17/180 (9%)
Query: 192 HCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQV------KHKNVVK 245
+ +G G +G K + ++ V K + D +TE E ++S+V KH N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKEL--DYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 246 ILGLCLE-TKVTL-LVYEFVSNGALSHYIHD--KSSQVLKNWKTCLRIAAETASAIHYLH 301
++ T TL +V E+ G L+ I K Q L + + LR+ + A+ H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL-DEEFVLRVMTQLTLALKECH 128
Query: 302 --SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
S +++H D+K AN+ LD K+ DF L I + DE + GT Y+ PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF-GLARILNHDEDFAKEFV-GTPYYMSPE 186
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 132
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S + GT+ YL PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPE 179
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 200 KDPDXVRKGDARLPLKWMAPE 220
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIR----ITEWEFLGIISQVKHKNVVKILG 248
L GGF VY+ + + A+K+ + +E + I E F+ +S H N+V+
Sbjct: 36 LAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS--GHPNIVQFCS 93
Query: 249 LCLETK-------VTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
K L+ + G L ++ S+ + T L+I +T A+ ++H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
P IIH D+K N+LL + T K+ DF S IS + + S R V
Sbjct: 154 R-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALV 204
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 26/154 (16%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G FG V+K Q VA+KK + +E IT + I+ +KH+NVV ++ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 250 CLETKVT---------LLVYEFVSN---GALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
C TK + LV++F + G LS+ + + +K R+ + +
Sbjct: 86 C-RTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------RVMQMLLNGL 138
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+Y+H I+H D+K+AN+L+ + K++DF
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADF 169
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---------IISQVKHKNVV 244
LG GGFG V+ + + K Y C + + G I+++V H +
Sbjct: 193 LGRGGFGEVFACQM----KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 245 KILGLCLETKVTL-LVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLH 301
L ETK L LV ++ G + ++I+ D+ + + + A+ S + +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLH 306
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+II+ D+K N+LLDD+ ++SD V + + + GT G++ PE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPE 359
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 237 QVK-------HKNVVKILGLCLETKVTLLVY-EFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 191 KDPDYVRKGDARLPLKWMAPE 211
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 26/154 (16%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G FG V+K Q VA+KK + +E IT + I+ +KH+NVV ++ +
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEI 85
Query: 250 CLETKVT---------LLVYEFVSN---GALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
C TK + LV++F + G LS+ + + +K R+ + +
Sbjct: 86 C-RTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK------RVMQMLLNGL 138
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+Y+H I+H D+K+AN+L+ + K++DF
Sbjct: 139 YYIHR---NKILHRDMKAANVLITRDGVLKLADF 169
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 17/180 (9%)
Query: 192 HCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQV------KHKNVVK 245
+ +G G +G K + ++ V K + D +TE E ++S+V KH N+V+
Sbjct: 12 YTIGTGSYGRCQKIRRKSDGKILVWKEL--DYGSMTEAEKQMLVSEVNLLRELKHPNIVR 69
Query: 246 ILGLCLE-TKVTL-LVYEFVSNGALSHYIHD--KSSQVLKNWKTCLRIAAETASAIHYLH 301
++ T TL +V E+ G L+ I K Q L + + LR+ + A+ H
Sbjct: 70 YYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL-DEEFVLRVMTQLTLALKECH 128
Query: 302 --SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
S +++H D+K AN+ LD K+ DF L I + D T+ + GT Y+ PE
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDF-GLARILNHD-TSFAKAFVGTPYYMSPE 186
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 23/174 (13%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKY----MCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G G+VY + + +VA+++ E+ I E + ++ + K+ N+V L
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINE---ILVMRENKNPNIVNYLD 84
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCL---RIAAETASAIHYLHSLAS 305
L +V E+++ G+L+ + + TC+ +IAA + L L S
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTE----------TCMDEGQIAAVCRECLQALEFLHS 134
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+IH D+KS NILL + + K++DF I+ +++ S M+ GT ++ PE
Sbjct: 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITP-EQSKRSEMV-GTPYWMAPE 186
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 77 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 130
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S + GT+ YL PE
Sbjct: 131 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLC----GTLDYLPPE 177
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---------IISQVKHKNVV 244
LG GGFG V+ + + K Y C + + G I+++V H +
Sbjct: 193 LGRGGFGEVFACQM----KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 245 KILGLCLETKVTL-LVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLH 301
L ETK L LV ++ G + ++I+ D+ + + + A+ S + +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLH 306
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+II+ D+K N+LLDD+ ++SD V + + + GT G++ PE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPE 359
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 11 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 70
Query: 237 QVK-------HKNVVKILGLCLETKVTLLVY-EFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 71 ELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPED 130
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 131 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 191 KDPDYVRKGDARLPLKWMAPE 211
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 116
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 117 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 176
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 177 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 236
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 237 KDPDYVRKGDARLPLKWMAPE 257
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 22 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 81
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPED 141
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 142 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 201
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 202 KDPDYVRKGDARLPLKWMAPE 222
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 76 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 129
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V S + GT+ YL PE
Sbjct: 130 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPE 176
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---------IISQVKHKNVV 244
LG GGFG V+ + + K Y C + + G I+++V H +
Sbjct: 193 LGRGGFGEVFACQM----KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 245 KILGLCLETKVTL-LVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLH 301
L ETK L LV ++ G + ++I+ D+ + + + A+ S + +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLH 306
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+II+ D+K N+LLDD+ ++SD V + + + GT G++ PE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPE 359
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 13/154 (8%)
Query: 194 LGMGGFGSVYKGVL---PDNTQVAVKKYMCADEIRITEWEFL---GIISQVKHKNVVKIL 247
LG G FGSV +GV VA+K E TE E + I+ Q+ + +V+++
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTE-EMMREAQIMHQLDNPYIVRLI 402
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
G+C + + +LV E G L ++ K ++ + + + + + YL +
Sbjct: 403 GVC-QAEALMLVMEMAGGGPLHKFLVGKREEIPVS--NVAELLHQVSMGMKYLEEK---N 456
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDD 341
+H ++ + N+LL + + AK+SDF + +DD
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADD 490
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 81/201 (40%), Gaps = 20/201 (9%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL-------- 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 139
Query: 281 --KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS 338
K++ T + + + LAS IH D+ + NILL + K+ DF I
Sbjct: 140 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 339 SDDETAMSTMIRGTVGYLDPE 359
D + R + ++ PE
Sbjct: 200 KDPDYVRKGDARLPLKWMAPE 220
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQV 238
E+ + + LG G FG V+ +T+VAVK M + + FL ++ +
Sbjct: 11 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT-MKPGSMSVEA--FLAEANVMKTL 67
Query: 239 KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASA 296
+H +VK+ + + + ++ EF++ G+L ++ + S Q L + +A+ A
Sbjct: 68 QHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPK---LIDFSAQIAEG 123
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYL 356
+ ++ + IH D+++ANIL+ + K++DF L + D+E + + +
Sbjct: 124 MAFIEQR---NYIHRDLRAANILVSASLVCKIADF-GLARVIEDNEYTAREGAKFPIKWT 179
Query: 357 DPE 359
PE
Sbjct: 180 APE 182
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 51/223 (22%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQV------KHKNVVKI 246
LG G FG V K +Y +IR TE + I+S+V H+ VV+
Sbjct: 13 VLGQGAFGQVVKA-----RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67
Query: 247 LGLCLE------------TKVTLLV-YEFVSNGALSHYIHDKS--SQVLKNWKTCLRIAA 291
LE K TL + E+ N L IH ++ Q + W R+
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLFR 123
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE---------SLVPISSDDE 342
+ A+ Y+HS IIH D+K NI +D++ K+ DF ++ + S +
Sbjct: 124 QILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 343 TAMSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALASNEKISM 385
S + +G Y TE+L G NEKI M
Sbjct: 181 PGSSDNLTSAIG--TAMYVATEVLDGTG-------HYNEKIDM 214
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 23/178 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---------IISQVKHKNVV 244
LG GGFG V+ + + K Y C + + G I+++V H +
Sbjct: 193 LGRGGFGEVFACQM----KATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV-HSRFI 247
Query: 245 KILGLCLETKVTL-LVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASAIHYLH 301
L ETK L LV ++ G + ++I+ D+ + + + A+ S + +LH
Sbjct: 248 VSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIF-YTAQIVSGLEHLH 306
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+II+ D+K N+LLDD+ ++SD V + + + GT G++ PE
Sbjct: 307 QR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELKAG--QTKTKGYAGTPGFMAPE 359
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEW---EFLG-------IISQVKHKNV 243
LG G FG V+ V + + V K++ +++ W LG I+S+V+H N+
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANI 91
Query: 244 VKILGLCLETKVTLLVYEFVSNGA-LSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYL 300
+K+L + LV E +G L +I H + + L ++ I + SA+ YL
Sbjct: 92 IKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASY-----IFRQLVSAVGYL 146
Query: 301 HSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IIH D+K NI++ +++T K+ DF S + + + GT+ Y PE
Sbjct: 147 RL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL---ERGKLFYTFCGTIEYCAPE 199
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 19/173 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + ++ E + I S ++H N++++ G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ L+ E+ G + + S +T I E A+A+ Y HS +
Sbjct: 79 YFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYIT-ELANALSYCHS---KRV 132
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLV--PISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+LL K++DF V P S D+ GT+ YL PE
Sbjct: 133 IHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPE 179
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 194 LGMGGFGSVYKG-VLPDNTQVAVK----KYMC-ADEIRITEWEFLGIISQVKHKNVVKIL 247
LG G F VY+ + +VA+K K M A ++ + E + I Q+KH +++++
Sbjct: 19 LGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNE-VKIHCQLKHPSILELY 77
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
++ LV E NG ++ Y+ ++ +N + + + YLHS
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR--HFMHQIITGMLYLHSHG--- 132
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
I+H D+ +N+LL N K++DF + E + + GT Y+ PE A
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIA 184
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQ---VKHKNVVKILGLC 250
+G G FG V++G +VAVK + +E W I Q ++H+N++ +
Sbjct: 11 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 66
Query: 251 LETKVTL----LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH----- 301
+ T LV ++ +G+L Y++ + V + +++A TAS + +LH
Sbjct: 67 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVG 122
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPI-SSDDETAMSTMIR-GTVGYLDPE 359
+ P+I H D+KS NIL+ N T ++D V S+ D ++ R GT Y+ PE
Sbjct: 123 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 21/143 (14%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCL---- 287
L II+ +K++ + G+ ++YE++ N ++ + D+ VL TC
Sbjct: 94 LQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKF--DEYFFVLDKNYTCFIPIQ 151
Query: 288 ---RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
I ++ Y+H+ +I H DVK +NIL+D N K+SDF + E
Sbjct: 152 VIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDF-------GESEYM 202
Query: 345 MSTMI---RGTVGYLDPEYAHTE 364
+ I RGT ++ PE+ E
Sbjct: 203 VDKKIKGSRGTYEFMPPEFFSNE 225
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 86/183 (46%), Gaps = 16/183 (8%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQV 238
E+ + + LG G FG V+ +T+VAVK M + + FL ++ +
Sbjct: 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT-MKPGSMSVEA--FLAEANVMKTL 240
Query: 239 KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASA 296
+H +VK+ + + + ++ EF++ G+L ++ + S Q L + +A+ A
Sbjct: 241 QHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPK---LIDFSAQIAEG 296
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYL 356
+ ++ + IH D+++ANIL+ + K++DF L + D+E + + +
Sbjct: 297 MAFIEQR---NYIHRDLRAANILVSASLVCKIADF-GLARVIEDNEYTAREGAKFPIKWT 352
Query: 357 DPE 359
PE
Sbjct: 353 APE 355
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I+ +H NVV++ L + ++ EF+ GAL+ D SQV N + +
Sbjct: 95 IMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALT----DIVSQVRLNEEQIATVCEAV 150
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
A+ YLH+ +IH D+KS +ILL + K+SDF IS D + GT
Sbjct: 151 LQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTP 205
Query: 354 GYLDPE 359
++ PE
Sbjct: 206 YWMAPE 211
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQ---VKHKNVVKILGLC 250
+G G FG V++G +VAVK + +E W I Q ++H+N++ +
Sbjct: 12 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 67
Query: 251 LETKVTL----LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH----- 301
+ T LV ++ +G+L Y++ + V + +++A TAS + +LH
Sbjct: 68 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVG 123
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPI-SSDDETAMSTMIR-GTVGYLDPE 359
+ P+I H D+KS NIL+ N T ++D V S+ D ++ R GT Y+ PE
Sbjct: 124 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE------IRITEWEFLGIISQVKHKNVVKI 246
+G+G +G+VYK P + VA+K + + E L + +H NVV++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 247 LGLCL------ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYL 300
+ +C E KVTL V+E V L Y+ DK+ +T + + + +L
Sbjct: 72 MDVCATSRTDREIKVTL-VFEHVDQD-LRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 301 HSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
H+ I+H D+K NIL+ T K++DF
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADF 156
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE------IRITEWEFLGIISQVKHKNVVKI 246
+G+G +G+VYK P + VA+K + + E L + +H NVV++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 247 LGLCL------ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYL 300
+ +C E KVTL V+E V L Y+ DK+ +T + + + +L
Sbjct: 72 MDVCATSRTDREIKVTL-VFEHVDQD-LRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 301 HSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
H+ I+H D+K NIL+ T K++DF
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADF 156
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQ---VKHKNVVKILGLC 250
+G G FG V++G +VAVK + +E W I Q ++H+N++ +
Sbjct: 14 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 69
Query: 251 LETKVTL----LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH----- 301
+ T LV ++ +G+L Y++ + V + +++A TAS + +LH
Sbjct: 70 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVG 125
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPI-SSDDETAMSTMIR-GTVGYLDPE 359
+ P+I H D+KS NIL+ N T ++D V S+ D ++ R GT Y+ PE
Sbjct: 126 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE------IRITEWEFLGIISQVKHKNVVKI 246
+G+G +G+VYK P + VA+K + + E L + +H NVV++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 247 LGLCL------ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYL 300
+ +C E KVTL V+E V L Y+ DK+ +T + + + +L
Sbjct: 72 MDVCATSRTDREIKVTL-VFEHVDQD-LRTYL-DKAPPPGLPAETIKDLMRQFLRGLDFL 128
Query: 301 HSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
H+ I+H D+K NIL+ T K++DF
Sbjct: 129 HANC---IVHRDLKPENILVTSGGTVKLADF 156
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 194 LGMGGFGSVY--KGVLPDNT-----QVAVKKYMC---ADEIRITEWEFLGIISQVKHKNV 243
LG GG+G V+ + V NT +KK M A + T+ E I+ +VKH +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE-RNILEEVKHPFI 83
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
V ++ L+ E++S G L ++ + + C +A E + A+ +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLHQ- 139
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
II+ D+K NI+L+ K++DF L S D T T GT+ Y+ PE
Sbjct: 140 --KGIIYRDLKPENIMLNHQGHVKLTDF-GLCKESIHDGTVTHTFC-GTIEYMAPE 191
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQ---VKHKNVVKILGLC 250
+G G FG V++G +VAVK + +E W I Q ++H+N++ +
Sbjct: 17 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 72
Query: 251 LETKVTL----LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH----- 301
+ T LV ++ +G+L Y++ + V + +++A TAS + +LH
Sbjct: 73 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVG 128
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPI-SSDDETAMSTMIR-GTVGYLDPE 359
+ P+I H D+KS NIL+ N T ++D V S+ D ++ R GT Y+ PE
Sbjct: 129 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIR---------ITEWEFLGIISQVKHKNV 243
+G+G +G+VYK P + VA+K + + E L + +H NV
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 244 VKILGLCL------ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
V+++ +C E KVTL V+E V L Y+ DK+ +T + + +
Sbjct: 77 VRLMDVCATSRTDREIKVTL-VFEHVDQD-LRTYL-DKAPPPGLPAETIKDLMRQFLRGL 133
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+LH+ I+H D+K NIL+ T K++DF
Sbjct: 134 DFLHANC---IVHRDLKPENILVTSGGTVKLADF 164
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM-CADEIRITEWEF-LGIISQVKHKNVVKILGLCL 251
LG G FG VYK + + +A K + E + ++ + I++ H N+VK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 252 ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
++ EF + GA+ + + + ++ + +T A++YLH IIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTES--QIQVVCKQTLDALNYLHD---NKIIHR 159
Query: 312 DVKSANILLDDNYTAKVSDF 331
D+K+ NIL + K++DF
Sbjct: 160 DLKAGNILFTLDGDIKLADF 179
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 68/168 (40%), Gaps = 34/168 (20%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVK---KYMCADEIRITEWEFLGIISQVKHKNVV 244
LG G FG V K T VAVK + E+R EF ++ QV H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF-NVLKQVNHPHVI 89
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIH---------------------DKSSQVLKNW 283
K+ G C + LL+ E+ G+L ++ D +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ A + + + YL A S++H D+ + NIL+ + K+SDF
Sbjct: 150 GDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDF 194
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM-CADEIRITEWEF-LGIISQVKHKNVVKILGLCL 251
LG G FG VYK + + +A K + E + ++ + I++ H N+VK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 252 ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
++ EF + GA+ + + + ++ + +T A++YLH IIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTES--QIQVVCKQTLDALNYLHD---NKIIHR 159
Query: 312 DVKSANILLDDNYTAKVSDF 331
D+K+ NIL + K++DF
Sbjct: 160 DLKAGNILFTLDGDIKLADF 179
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM-CADEIRITEWEF-LGIISQVKHKNVVKILGLCL 251
LG G FG VYK + + +A K + E + ++ + I++ H N+VK+L
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 252 ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
++ EF + GA+ + + + ++ + +T A++YLH IIH
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTES--QIQVVCKQTLDALNYLHD---NKIIHR 159
Query: 312 DVKSANILLDDNYTAKVSDF 331
D+K+ NIL + K++DF
Sbjct: 160 DLKAGNILFTLDGDIKLADF 179
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQ---VKHKNVVKILGLC 250
+G G FG V++G +VAVK + +E W I Q ++H+N++ +
Sbjct: 50 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 105
Query: 251 LETKVTL----LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH----- 301
+ T LV ++ +G+L Y++ + V + +++A TAS + +LH
Sbjct: 106 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVG 161
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPI-SSDDETAMSTMIR-GTVGYLDPE 359
+ P+I H D+KS NIL+ N T ++D V S+ D ++ R GT Y+ PE
Sbjct: 162 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVK----KYMCADEIRITEWEFLGIISQVKHKNVVKILGL 249
+G G FG VY G + +VA++ + D+++ + E + Q +H+NVV +G
Sbjct: 41 IGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREVMAY-RQTRHENVVLFMGA 97
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
C+ ++ L + D ++++ + +IA E + YLH + I+
Sbjct: 98 CMSPPHLAIITSLCKGRTLYSVVRD--AKIVLDVNKTRQIAQEIVKGMGYLH---AKGIL 152
Query: 310 HSDVKSANILLDDNYTAKVSDF 331
H D+KS N+ DN ++DF
Sbjct: 153 HKDLKSKNVFY-DNGKVVITDF 173
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQ---VKHKNVVKILGLC 250
+G G FG V++G +VAVK + +E W I Q ++H+N++ +
Sbjct: 37 IGKGRFGEVWRGKW-RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAAD 92
Query: 251 LETKVTL----LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH----- 301
+ T LV ++ +G+L Y++ + V + +++A TAS + +LH
Sbjct: 93 NKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTV----EGMIKLALSTASGLAHLHMEIVG 148
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPI-SSDDETAMSTMIR-GTVGYLDPE 359
+ P+I H D+KS NIL+ N T ++D V S+ D ++ R GT Y+ PE
Sbjct: 149 TQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGVL-PDN----TQVAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FG V P N VAVK K C + R + + I+ + H++++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 247 LGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G C + K LV E+V G+L Y+ S + + L A + + YLHS
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ----LLLFAQQICEGMAYLHSQ- 136
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
IH ++ + N+LLD++ K+ DF
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDF 161
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 27/190 (14%)
Query: 178 FSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYM----CAD--EIRITEWEF 231
F E+L+A +G G FG V D ++ KYM C + E+R ++
Sbjct: 14 FDHFEILRA-------IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR-NVFKE 65
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L I+ ++H +V + + + +V + + G L +++ V +T
Sbjct: 66 LQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQ---QNVHFKEETVKLFIC 122
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE--SLVPISSDDETAMSTMI 349
E A+ YL + IIH D+K NILLD++ ++DF +++P ET ++TM
Sbjct: 123 ELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP----RETQITTMA 175
Query: 350 RGTVGYLDPE 359
GT Y+ PE
Sbjct: 176 -GTKPYMAPE 184
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 29/158 (18%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQV------KHKNVVKI 246
LG G FG V K +Y +IR TE + I+S+V H+ VV+
Sbjct: 13 VLGQGAFGQVVKA-----RNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRY 67
Query: 247 LGLCLE------------TKVTLLV-YEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
LE K TL + E+ N L IH S + + R+ +
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIH--SENLNQQRDEYWRLFRQI 125
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
A+ Y+HS IIH ++K NI +D++ K+ DF
Sbjct: 126 LEALSYIHS---QGIIHRNLKPXNIFIDESRNVKIGDF 160
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 23/156 (14%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVK---KYMCADEIRITEWE-FL---GIISQVKHKNVVKI 246
LG G FGSV + L VK K + AD I ++ E FL + + H +V K+
Sbjct: 31 LGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKL 90
Query: 247 LGLCLETK------VTLLVYEFVSNGALSHYIHDKSSQVLKN-----WKTCLRIAAETAS 295
+G+ L ++ + +++ F+ +G L ++ +S++ +N +T +R + A
Sbjct: 91 VGVSLRSRAKGRLPIPMVILPFMKHGDLHAFL--LASRIGENPFNLPLQTLVRFMVDIAC 148
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ YL +S + IH D+ + N +L ++ T V+DF
Sbjct: 149 GMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADF 181
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE 292
++ VKH +V L +T L V ++++ G L +++ + + + AAE
Sbjct: 92 LLKNVKHPFLVG-LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF---YAAE 147
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
ASA+ YLHSL +I++ D+K NILLD ++DF L + + + ST GT
Sbjct: 148 IASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDF-GLCKENIEHNSTTSTFC-GT 202
Query: 353 VGYLDPEYAHTE 364
YL PE H +
Sbjct: 203 PEYLAPEVLHKQ 214
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 76/155 (49%), Gaps = 15/155 (9%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLG---IISQV 238
E+ + + LG G FG V+ +T+VAVK M + + FL ++ +
Sbjct: 178 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKT-MKPGSMSVEA--FLAEANVMKTL 234
Query: 239 KHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH--DKSSQVLKNWKTCLRIAAETASA 296
+H +VK+ + + + ++ EF++ G+L ++ + S Q L + +A+ A
Sbjct: 235 QHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLDFLKSDEGSKQPLPK---LIDFSAQIAEG 290
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ ++ + IH D+++ANIL+ + K++DF
Sbjct: 291 MAFIEQR---NYIHRDLRAANILVSASLVCKIADF 322
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 229 WEFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
WE I++ VV++ + K +V E++ G L + + + V + W
Sbjct: 123 WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYDVPEKWAKFY- 179
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAM--S 346
AE A+ +HS+ +IH DVK N+LLD + K++DF + + + DET M
Sbjct: 180 -TAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTCMKM---DETGMVHC 232
Query: 347 TMIRGTVGYLDPE 359
GT Y+ PE
Sbjct: 233 DTAVGTPDYISPE 245
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGVL-PDN----TQVAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FG V P N VAVK K C ++R + I+ + H+++VK
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 247 LGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G C + K LV E+V G+L Y+ + + L A + + YLH+
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ----LLLFAQQICEGMAYLHA-- 129
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
IH + + N+LLD++ K+ DF
Sbjct: 130 -QHYIHRALAARNVLLDNDRLVKIGDF 155
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 34/168 (20%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVK---KYMCADEIRITEWEFLGIISQVKHKNVV 244
LG G FG V K T VAVK + E+R EF ++ QV H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF-NVLKQVNHPHVI 89
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIH---------------------DKSSQVLKNW 283
K+ G C + LL+ E+ G+L ++ D +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ A + + + YL A ++H D+ + NIL+ + K+SDF
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGVL-PDN----TQVAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FG V P N VAVK K C ++R + I+ + H+++VK
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 247 LGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G C + K LV E+V G+L Y+ + + L A + + YLH+
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQ----LLLFAQQICEGMAYLHA-- 130
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
IH + + N+LLD++ K+ DF
Sbjct: 131 -QHYIHRALAARNVLLDNDRLVKIGDF 156
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 85/191 (44%), Gaps = 26/191 (13%)
Query: 193 CLGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQV--KHKNVVKIL 247
C+G G +G V++G L VAVK + DE R TE I + V +H N++ +
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSRDEQSWFRETE-----IYNTVLLRHDNILGFI 68
Query: 248 GLCLETKVT----LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH-- 301
+ ++ + L+ + +G+L ++ ++ + LR+A A + +LH
Sbjct: 69 ASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEP----HLALRLAVSAACGLAHLHVE 124
Query: 302 ---SLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIR-GTVGYL 356
+ P+I H D KS N+L+ N ++D V S D + R GT Y+
Sbjct: 125 IFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYM 184
Query: 357 DPEYAHTELLT 367
PE ++ T
Sbjct: 185 APEVLDEQIRT 195
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ ++ ++KH+N+V + + T LV + VS G L I ++ K+ ++
Sbjct: 57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ--- 113
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ SA+ YLH I+H D+K N+L ++N ++DF +S ++ + +
Sbjct: 114 QVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFG----LSKMEQNGIMST 166
Query: 349 IRGTVGYLDPE 359
GT GY+ PE
Sbjct: 167 ACGTPGYVAPE 177
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 34/168 (20%)
Query: 194 LGMGGFGSVYKGVL------PDNTQVAVK---KYMCADEIRITEWEFLGIISQVKHKNVV 244
LG G FG V K T VAVK + E+R EF ++ QV H +V+
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEF-NVLKQVNHPHVI 89
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIH---------------------DKSSQVLKNW 283
K+ G C + LL+ E+ G+L ++ D +
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ A + + + YL A ++H D+ + NIL+ + K+SDF
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDF 194
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 80/176 (45%), Gaps = 19/176 (10%)
Query: 194 LGMGGFGSVY--KGVLPDNT-----QVAVKKYMC---ADEIRITEWEFLGIISQVKHKNV 243
LG GG+G V+ + V NT +KK M A + T+ E I+ +VKH +
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAE-RNILEEVKHPFI 83
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
V ++ L+ E++S G L ++ + + C +A E + A+ +LH
Sbjct: 84 VDLIYAFQTGGKLYLILEYLSGGEL--FMQLEREGIFMEDTACFYLA-EISMALGHLHQ- 139
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
II+ D+K NI+L+ K++DF L S D T GT+ Y+ PE
Sbjct: 140 --KGIIYRDLKPENIMLNHQGHVKLTDF-GLCKESIHDGTVTHXFC-GTIEYMAPE 191
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGVL-PDN----TQVAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FG V P N VAVK K C + R + + I+ + H++++K
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 247 LGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G C + K LV E+V G+L Y+ S + + L A + + YLH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQ----LLLFAQQICEGMAYLHAQ- 136
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
IH ++ + N+LLD++ K+ DF
Sbjct: 137 --HYIHRNLAARNVLLDNDRLVKIGDF 161
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 8/147 (5%)
Query: 188 KNFHHCLG-MGGFGSVYKGVLPDNTQVAVKKYM-CADEIRITEWEF-LGIISQVKHKNVV 244
++F +G +G FG VYK + + +A K + E + ++ + I++ H N+V
Sbjct: 11 EDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 70
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
K+L ++ EF + GA+ + + + ++ + +T A++YLH
Sbjct: 71 KLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTES--QIQVVCKQTLDALNYLHD-- 126
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
IIH D+K+ NIL + K++DF
Sbjct: 127 -NKIIHRDLKAGNILFTLDGDIKLADF 152
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H N++ + + +L+ E VS G L ++ +K S L+
Sbjct: 80 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK--- 136
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD----NYTAKVSDFESLVPISSDDETAMST 347
+ +HYLH S I H D+K NI+L D N K+ DF I + +E
Sbjct: 137 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---K 190
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 191 NIFGTPEFVAPEIVNYEPL 209
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H N++ + + +L+ E VS G L ++ +K S L+
Sbjct: 66 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK--- 122
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD----NYTAKVSDFESLVPISSDDETAMST 347
+ +HYLH S I H D+K NI+L D N K+ DF I + +E
Sbjct: 123 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---K 176
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 177 NIFGTPEFVAPEIVNYEPL 195
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H N++ + + +L+ E VS G L ++ +K S L+
Sbjct: 59 VNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLK--- 115
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD----NYTAKVSDFESLVPISSDDETAMST 347
+ +HYLH S I H D+K NI+L D N K+ DF I + +E
Sbjct: 116 QILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---K 169
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 170 NIFGTPEFVAPEIVNYEPL 188
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 26/160 (16%)
Query: 194 LGMGGFGSVYKGVL-----PDNTQ-VAVKKYMCADEIRITEWEF---LGIISQVKHKNVV 244
LG FG VYKG L + TQ VA+K E + E EF + ++++H NVV
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARLQHPNVV 92
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYI-------------HDKSSQVLKNWKTCLRIAA 291
+LG+ + + +++ + S+G L ++ D++ + + + A
Sbjct: 93 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 152
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ A+ + YL +S ++H D+ + N+L+ D K+SD
Sbjct: 153 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDL 189
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 70/173 (40%), Gaps = 15/173 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFL----GIISQVKHKNVVKILGL 249
LG G F V + V TQ K + ++ + + L I +KH N+V++
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
E LV++ V+ G L I + + C+ E+ + IH I+
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIH------QHDIV 152
Query: 310 HSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
H D+K N+LL K++DF + + + + GT GYL PE
Sbjct: 153 HRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG--FAGTPGYLSPE 203
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI-HDKSSQVLKNWKTCLRIAAE 292
I+ +H+NVV++ L +V EF+ GAL+ + H + ++ +IAA
Sbjct: 124 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAV 175
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
+ + L L + +IH D+KS +ILL + K+SDF +S E + GT
Sbjct: 176 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGT 233
Query: 353 VGYLDPE 359
++ PE
Sbjct: 234 PYWMAPE 240
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCA------DEIRITEWEFLGIISQVKHKNVVKI 246
LG G F +VYK + Q VA+KK D I T + ++ ++ H N++ +
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGL 77
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
L LV++F+ L I D S + T I A + L L
Sbjct: 78 LDAFGHKSNISLVFDFMETD-LEVIIKDNSLVL-----TPSHIKAYMLMTLQGLEYLHQH 131
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
I+H D+K N+LLD+N K++DF
Sbjct: 132 WILHRDLKPNNLLLDENGVLKLADF 156
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 17/174 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK----KYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG G F V + + +P + A K K + A + + E E I +KH N+V++
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLERE-ARICRLLKHPNIVRLHD 70
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
E LV++ V+ G L I + + C++ E+ + H I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL------NGI 124
Query: 309 IHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H D+K N+LL K++DF + + D + GT GYL PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPE 176
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 17/174 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVK----KYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG G F V + + +P + A K K + A + + E E I +KH N+V++
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLERE-ARICRLLKHPNIVRLHD 70
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
E LV++ V+ G L I + + C++ E+ + H I
Sbjct: 71 SISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL------NGI 124
Query: 309 IHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H D+K N+LL K++DF + + D + GT GYL PE
Sbjct: 125 VHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG--FAGTPGYLSPE 176
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 26/160 (16%)
Query: 194 LGMGGFGSVYKGVL-----PDNTQ-VAVKKYMCADEIRITEWEF---LGIISQVKHKNVV 244
LG FG VYKG L + TQ VA+K E + E EF + ++++H NVV
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE-EFRHEAMLRARLQHPNVV 75
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYI-------------HDKSSQVLKNWKTCLRIAA 291
+LG+ + + +++ + S+G L ++ D++ + + + A
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ A+ + YL +S ++H D+ + N+L+ D K+SD
Sbjct: 136 QIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDL 172
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI-HDKSSQVLKNWKTCLRIAAE 292
I+ +H+NVV++ L +V EF+ GAL+ + H + ++ +IAA
Sbjct: 79 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAV 130
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
+ + L L + +IH D+KS +ILL + K+SDF +S E + GT
Sbjct: 131 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGT 188
Query: 353 VGYLDPE 359
++ PE
Sbjct: 189 PYWMAPE 195
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI-HDKSSQVLKNWKTCLRIAAE 292
I+ +H+NVV++ L +V EF+ GAL+ + H + ++ +IAA
Sbjct: 81 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAV 132
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
+ + L L + +IH D+KS +ILL + K+SDF +S E + GT
Sbjct: 133 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGT 190
Query: 353 VGYLDPE 359
++ PE
Sbjct: 191 PYWMAPE 197
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 12/150 (8%)
Query: 212 QVAVKKYMCADEIRITEWEF--LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALS 269
QVAVKK + R E F + I+ H NVV + L +V EF+ GAL+
Sbjct: 72 QVAVKKMDLRKQQR-RELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALT 130
Query: 270 HYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVS 329
D + N + + A+ YLH+ +IH D+KS +ILL + K+S
Sbjct: 131 ----DIVTHTRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLS 183
Query: 330 DFESLVPISSDDETAMSTMIRGTVGYLDPE 359
DF +S E + GT ++ PE
Sbjct: 184 DFGFCAQVSK--EVPKRKXLVGTPYWMAPE 211
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI-HDKSSQVLKNWKTCLRIAAE 292
I+ +H+NVV++ L +V EF+ GAL+ + H + ++ +IAA
Sbjct: 70 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAV 121
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
+ + L L + +IH D+KS +ILL + K+SDF +S E + GT
Sbjct: 122 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGT 179
Query: 353 VGYLDPE 359
++ PE
Sbjct: 180 PYWMAPE 186
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI-HDKSSQVLKNWKTCLRIAAE 292
I+ +H+NVV++ L +V EF+ GAL+ + H + ++ +IAA
Sbjct: 201 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAV 252
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
+ + L L + +IH D+KS +ILL + K+SDF +S E + GT
Sbjct: 253 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGT 310
Query: 353 VGYLDPE 359
++ PE
Sbjct: 311 PYWMAPE 317
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 194 LGMGGFGSVYKGVLPDN-TQ--VAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G FG V+KG+ DN TQ VA+K A++ + + ++SQ V K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKS---SQVLKNWKTCLRIAAETASAIHYLHSLAS 305
L+ ++ E++ G+ + +Q+ T LR E + YLHS
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDYLHSEKK 125
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K+AN+LL ++ K++DF + +D + +T + GT ++ PE
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADF-GVAGQLTDTQIKRNTFV-GTPFWMAPE 174
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 16/176 (9%)
Query: 191 HHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNV------- 243
H +G GGFG VY D ++ K + I++ + E L + ++ V
Sbjct: 193 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 252
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
+ + T L + NG HY H V AAE + ++H+
Sbjct: 253 IVCMSYAFHTPDKLSFILDLMNGGDLHY-HLSQHGVFSEADMRF-YAAEIILGLEHMHNR 310
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+++ D+K ANILLD++ ++SD + ++ D GT GY+ PE
Sbjct: 311 F---VVYRDLKPANILLDEHGHVRISD----LGLACDFSKKKPHASVGTHGYMAPE 359
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 191 HHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNV------- 243
H +G GGFG VY D ++ K + I++ + E L + ++ V
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAETASAIHYLHS 302
+ + T L + NG HY H V + +R AAE + ++H+
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHY-HLSQHGVFS--EADMRFYAAEIILGLEHMHN 310
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+++ D+K ANILLD++ ++SD + ++ D GT GY+ PE
Sbjct: 311 RF---VVYRDLKPANILLDEHGHVRISD----LGLACDFSKKKPHASVGTHGYMAPE 360
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH-DKSSQVLKNWKTCLRIAAETASA 296
++H +++K+ + ++V E+ N + + DK S+ + R + SA
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISA 115
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYL 356
+ Y H I+H D+K N+LLD++ K++DF L I +D ++ + G
Sbjct: 116 VEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF-GLSNIMTD-----GNFLKTSCG-- 164
Query: 357 DPEYAHTELLTG 368
P YA E+++G
Sbjct: 165 SPNYAAPEVISG 176
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI-HDKSSQVLKNWKTCLRIAAE 292
I+ +H+NVV++ L +V EF+ GAL+ + H + ++ +IAA
Sbjct: 74 IMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE--------QIAAV 125
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
+ + L L + +IH D+KS +ILL + K+SDF +S E + GT
Sbjct: 126 CLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK--EVPRRKXLVGT 183
Query: 353 VGYLDPE 359
++ PE
Sbjct: 184 PYWMAPE 190
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 229 WEFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
WE I++ VV++ + + +V E++ G L + + + V + W
Sbjct: 117 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY- 173
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
AE A+ +HS+ IH DVK N+LLD + K++DF + + ++ + T
Sbjct: 174 -TAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 349 IRGTVGYLDPE 359
+ GT Y+ PE
Sbjct: 230 V-GTPDYISPE 239
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH-DKSSQVLKNWKTCLRIAAETASA 296
++H +++K+ + ++V E+ N + + DK S+ + R + SA
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISA 119
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYL 356
+ Y H I+H D+K N+LLD++ K++DF L I +D ++ + G
Sbjct: 120 VEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF-GLSNIMTD-----GNFLKTSCG-- 168
Query: 357 DPEYAHTELLTG 368
P YA E+++G
Sbjct: 169 SPNYAAPEVISG 180
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH-DKSSQVLKNWKTCLRIAAETASA 296
++H +++K+ + ++V E+ N + + DK S+ + R + SA
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISA 125
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYL 356
+ Y H I+H D+K N+LLD++ K++DF L I +D ++ + G
Sbjct: 126 VEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF-GLSNIMTD-----GNFLKTSCG-- 174
Query: 357 DPEYAHTELLTG 368
P YA E+++G
Sbjct: 175 SPNYAAPEVISG 186
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 229 WEFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
WE I++ VV++ + + +V E++ G L + + + V + W
Sbjct: 122 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY- 178
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
AE A+ +HS+ IH DVK N+LLD + K++DF + + ++ + T
Sbjct: 179 -TAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 349 IRGTVGYLDPE 359
+ GT Y+ PE
Sbjct: 235 V-GTPDYISPE 244
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 17/132 (12%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH-DKSSQVLKNWKTCLRIAAETASA 296
++H +++K+ + ++V E+ N + + DK S+ + R + SA
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE-----QEARRFFQQIISA 124
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYL 356
+ Y H I+H D+K N+LLD++ K++DF L I +D ++ + G
Sbjct: 125 VEYCHR---HKIVHRDLKPENLLLDEHLNVKIADF-GLSNIMTD-----GNFLKTSCG-- 173
Query: 357 DPEYAHTELLTG 368
P YA E+++G
Sbjct: 174 SPNYAAPEVISG 185
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 8/131 (6%)
Query: 229 WEFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLR 288
WE I++ VV++ + + +V E++ G L + + + V + W
Sbjct: 122 WEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNYDVPEKWARFY- 178
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTM 348
AE A+ +HS+ IH DVK N+LLD + K++DF + + ++ + T
Sbjct: 179 -TAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 349 IRGTVGYLDPE 359
+ GT Y+ PE
Sbjct: 235 V-GTPDYISPE 244
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 191 HHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNV------- 243
H +G GGFG VY D ++ K + I++ + E L + ++ V
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAETASAIHYLHS 302
+ + T L + NG HY H V + +R AAE + ++H+
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHY-HLSQHGVFS--EADMRFYAAEIILGLEHMHN 310
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+++ D+K ANILLD++ ++SD + ++ D GT GY+ PE
Sbjct: 311 RF---VVYRDLKPANILLDEHGHVRISD----LGLACDFSKKKPHASVGTHGYMAPE 360
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 18/177 (10%)
Query: 191 HHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNV------- 243
H +G GGFG VY D ++ K + I++ + E L + ++ V
Sbjct: 194 HRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPF 253
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI-AAETASAIHYLHS 302
+ + T L + NG HY H V + +R AAE + ++H+
Sbjct: 254 IVCMSYAFHTPDKLSFILDLMNGGDLHY-HLSQHGVFS--EADMRFYAAEIILGLEHMHN 310
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+++ D+K ANILLD++ ++SD + ++ D GT GY+ PE
Sbjct: 311 RF---VVYRDLKPANILLDEHGHVRISD----LGLACDFSKKKPHASVGTHGYMAPE 360
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGI------ISQVKHKNVVKI 246
LG GG V+ L D+ VAVK + AD R + +L + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSF-YLRFRREAQNAAALNHPAIVAV 77
Query: 247 LGLC-LETKVTLLVY---EFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
ET L Y E+V L +H + K + + A+ A+++ H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQ 134
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYA 361
IIH DVK ANIL+ KV DF I+ S + + + GT YL PE A
Sbjct: 135 NG---IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQA 191
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM---CADEIRITEWEFLGIISQVKHKNVVKILGLC 250
+G G FG VYKG+ +V K + A++ + + ++SQ + + G
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYFGSY 86
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNW-KTCLRIAAETASAIHYLHSLASPSII 309
L++ ++ E++ G+ + K + + + T LR E + YLHS I
Sbjct: 87 LKSTKLWIIMEYLGGGSALDLL--KPGPLEETYIATILR---EILKGLDYLHSERK---I 138
Query: 310 HSDVKSANILLDDNYTAKVSDF 331
H D+K+AN+LL + K++DF
Sbjct: 139 HRDIKAANVLLSEQGDVKLADF 160
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCL-- 251
+G G FG V++ L ++ +VA+KK + + E + + I VKH NVV +
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRI---VKHPNVVDLKAFFYSN 104
Query: 252 ---ETKVTL-LVYEFVSNG---ALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
+ +V L LV E+V A HY K + + K + + ++ Y+HS+
Sbjct: 105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYM---YQLLRSLAYIHSIG 161
Query: 305 SPSIIHSDVKSANILLD-DNYTAKVSDFES 333
I H D+K N+LLD + K+ DF S
Sbjct: 162 ---ICHRDIKPQNLLLDPPSGVLKLIDFGS 188
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 22/174 (12%)
Query: 194 LGMGGFGSVYKGVLPDN-TQ--VAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G FG V+KG+ DN TQ VA+K A++ + + ++SQ V K G
Sbjct: 35 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 92
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKS---SQVLKNWKTCLRIAAETASAIHYLHSLAS 305
L+ ++ E++ G+ + +Q+ T LR E + YLHS
Sbjct: 93 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDYLHSEKK 145
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K+AN+LL ++ K++DF + +D + +T + GT ++ PE
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADF-GVAGQLTDTQIKRNTFV-GTPFWMAPE 194
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 234 IISQVKHKNVVKILGLCLETKVT--LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
I+ + H++++K G C + LV E+V G+L Y+ S + + L A
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQ----LLLFAQ 141
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YLH+ IH D+ + N+LLD++ K+ DF
Sbjct: 142 QICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDF 178
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGI------ISQVKHKNVVKI 246
LG GG V+ L D+ VAVK + AD R + +L + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSF-YLRFRREAQNAAALNHPAIVAV 77
Query: 247 LGLC-LETKVTLLVY---EFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
ET L Y E+V L +H + K + + A+ A+++ H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQ 134
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYA 361
IIH DVK ANI++ KV DF I+ S + + + GT YL PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---K 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPAFVAPEIVNYEPL 194
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGI------ISQVKHKNVVKI 246
LG GG V+ L D+ VAVK + AD R + +L + + H +V +
Sbjct: 20 LGFGGMSEVHLARDLRDHRDVAVK-VLRADLARDPSF-YLRFRREAQNAAALNHPAIVAV 77
Query: 247 LGLC-LETKVTLLVY---EFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
ET L Y E+V L +H + K + + A+ A+++ H
Sbjct: 78 YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQ 134
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYA 361
IIH DVK ANI++ KV DF I+ S + + + GT YL PE A
Sbjct: 135 NG---IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVK----KYMCADEIRI-TEWEFLGII 235
ELLK + H +G GGF V + VA+K + +D RI TE E L
Sbjct: 7 ELLKYYE-LHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL--- 62
Query: 236 SQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETAS 295
++H+++ ++ + +V E+ G L YI + + + R + S
Sbjct: 63 KNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR---QIVS 119
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGY 355
A+ Y+HS H D+K N+L D+ + K+ DF + + + T G++ Y
Sbjct: 120 AVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC-GSLAY 175
Query: 356 LDPE 359
PE
Sbjct: 176 AAPE 179
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 13/88 (14%)
Query: 285 TCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE-- 342
CL I + A A+ +LHS ++H D+K +NI + KV DF + + D+E
Sbjct: 165 VCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQ 221
Query: 343 TAMSTMI-----RGTVG---YLDPEYAH 362
T ++ M G VG Y+ PE H
Sbjct: 222 TVLTPMPAYATHXGQVGTKLYMSPEQIH 249
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 83/181 (45%), Gaps = 29/181 (16%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR-ITEWEFLGI------ISQVKHKNVVKI 246
+G G F +VYKG+ +T+ V+ C + R +T+ E + ++H N+V+
Sbjct: 34 IGRGSFKTVYKGL---DTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRF 90
Query: 247 LGLCLET----KVTLLVYEFVSNGALSHYIHD---KSSQVLKNWKTCLRIAAETASAIHY 299
T K +LV E ++G L Y+ +VL++W C +I + +
Sbjct: 91 YDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW--CRQI----LKGLQF 144
Query: 300 LHSLASPSIIHSDVKSANILL-DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDP 358
LH+ +P IIH D+K NI + + K+ D + +++ + + + GT + P
Sbjct: 145 LHT-RTPPIIHRDLKCDNIFITGPTGSVKIGD----LGLATLKRASFAKAVIGTPEFXAP 199
Query: 359 E 359
E
Sbjct: 200 E 200
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 16/133 (12%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC--LRI 289
+ ++ + H N++K+ + + K LV EF G L I ++ + C I
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-----FDECDAANI 151
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYT---AKVSDFESLVPISSDDETAMS 346
+ S I YLH +I+H D+K NILL++ + K+ DF L S D
Sbjct: 152 MKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDF-GLSSFFSKDYKLRD 207
Query: 347 TMIRGTVGYLDPE 359
+ GT Y+ PE
Sbjct: 208 RL--GTAYYIAPE 218
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 194 LGMGGFGSVYKGVLPDN-TQ--VAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G FG V+KG+ DN TQ VA+K A++ + + ++SQ V K G
Sbjct: 30 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 87
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKS---SQVLKNWKTCLRIAAETASAIHYLHSLAS 305
L+ ++ E++ G+ + +Q+ T LR E + YLHS
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDYLHSEKK 140
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
IH D+K+AN+LL ++ K++DF
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADF 163
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 15/173 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I +KH N+V++ E LV++ V+ G L I + + C++ +
Sbjct: 56 ICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 112
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTMIR 350
A+ + H + ++H D+K N+LL K++DF + + D +
Sbjct: 113 LEAVLHCHQMG---VVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG--FA 167
Query: 351 GTVGYLDPEYAHTELLTGMNPNSYVALASNEKISMV--PYFLDSIENNSFRQI 401
GT GYL PE E P A I +V P F D ++ ++QI
Sbjct: 168 GTPGYLSPEVLRKEAYG--KPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 218
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 71 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 126
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 127 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 161
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 20/146 (13%)
Query: 194 LGMGGFGSVYKGVLPDN-TQ--VAVK--KYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G FG V+KG+ DN TQ VA+K A++ + + ++SQ V K G
Sbjct: 15 IGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYG 72
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKS---SQVLKNWKTCLRIAAETASAIHYLHSLAS 305
L+ ++ E++ G+ + +Q+ T LR E + YLHS
Sbjct: 73 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQI----ATILR---EILKGLDYLHSEKK 125
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
IH D+K+AN+LL ++ K++DF
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADF 148
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGY 355
+IH LH +H D+K N+LLD N +++DF S + + +DD T S++ GT Y
Sbjct: 206 SIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKM-NDDGTVQSSVAVGTPDY 258
Query: 356 LDPE 359
+ PE
Sbjct: 259 ISPE 262
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 100/257 (38%), Gaps = 27/257 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF-----LGIISQVKHKNVVKILG 248
LG G FG+VY + + K + +I E + I + + H N++++
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ + L+ E+ G L Y + S +T I E A A+ Y H +
Sbjct: 91 YFYDRRRIYLILEYAPRGEL--YKELQKSCTFDEQRTAT-IMEELADALMYCHG---KKV 144
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLTG 368
IH D+K N+LL K++DF V S M GT+ YL P E++ G
Sbjct: 145 IHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC----GTLDYLPP-----EMIEG 195
Query: 369 MNPNSYVAL-----ASNEKISMVPYFLDSIENNSFRQILNFQXXXXXXXXXXXXXXXXXS 423
N V L E + P F + N ++R+I+ + S
Sbjct: 196 RMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIV--KVDLKFPASVPTGAQDLIS 253
Query: 424 KCLRIRGTERPTMKEVS 440
K LR +ER + +VS
Sbjct: 254 KLLRHNPSERLPLAQVS 270
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGY 355
+IH LH +H D+K N+LLD N +++DF S + + +DD T S++ GT Y
Sbjct: 190 SIHQLH------YVHRDIKPDNVLLDVNGHIRLADFGSCLKM-NDDGTVQSSVAVGTPDY 242
Query: 356 LDPE 359
+ PE
Sbjct: 243 ISPE 246
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 136
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 137 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 171
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 136
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 137 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 171
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS ++++ D+K N
Sbjct: 228 FVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHS--EKNVVYRDLKLEN 282
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M T GT YL PE
Sbjct: 283 LMLDKDGHIKITDF-GLCKEGIKDGATMKTFC-GTPEYLAPE 322
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 59 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 114
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 115 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 149
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 79 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 134
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 135 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 169
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 120
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 121 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 155
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS +++ D+K N
Sbjct: 82 FVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIKLEN 135
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M T GT YL PE
Sbjct: 136 LMLDKDGHIKITDF-GLCKEGISDGATMKTFC-GTPEYLAPE 175
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS +++ D+K N
Sbjct: 82 FVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIKLEN 135
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M T GT YL PE
Sbjct: 136 LMLDKDGHIKITDF-GLCKEGISDGATMKTFC-GTPEYLAPE 175
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 120
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 121 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 155
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS +++ D+K N
Sbjct: 85 FVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIKLEN 138
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M T GT YL PE
Sbjct: 139 LMLDKDGHIKITDF-GLCKEGISDGATMKTFC-GTPEYLAPE 178
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 61 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 116
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 117 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 151
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 76/169 (44%), Gaps = 12/169 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM---CADEIRITEWEFLGIISQVKHKNVVKILGLC 250
+G G FG V+KG+ QV K + A++ + + ++SQ V K G
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYYGSY 90
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
L+ ++ E++ G+ + + T L+ E + YLHS IH
Sbjct: 91 LKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ-IATMLK---EILKGLDYLHSEKK---IH 143
Query: 311 SDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+K+AN+LL + K++DF + +D + +T + GT ++ PE
Sbjct: 144 RDIKAANVLLSEQGDVKLADF-GVAGQLTDTQIKRNTFV-GTPFWMAPE 190
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS ++++ D+K N
Sbjct: 225 FVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHS--EKNVVYRDLKLEN 279
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M T GT YL PE
Sbjct: 280 LMLDKDGHIKITDF-GLCKEGIKDGATMKTFC-GTPEYLAPE 319
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---K 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 82/205 (40%), Gaps = 33/205 (16%)
Query: 191 HHCLGMGGFGSVYKGVLPDNTQV----AVKK--YMCADEIRITEWEFLGIISQVKHKNVV 244
H LG G FG V+ Q A+KK + D++ T E ++S +
Sbjct: 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE-KRVLSLAWEHPFL 80
Query: 245 KILGLCLETKVTLL-VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
+ +TK L V E+++ G L ++I L AAE + +LHS
Sbjct: 81 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSR---ATFYAAEIILGLQFLHS- 136
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE---- 359
I++ D+K NILLD + K++DF D A + GT Y+ PE
Sbjct: 137 --KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD--AKTNXFCGTPDYIAPEILLG 192
Query: 360 --YAHT-----------ELLTGMNP 371
Y H+ E+L G +P
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 79/188 (42%), Gaps = 21/188 (11%)
Query: 190 FHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCAD--------EIRITEWEFLGIISQVKHK 241
F LG G FG V + + + K + D E +TE I+S ++
Sbjct: 27 FIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKR---ILSLARNH 83
Query: 242 NVVKILGLCLETKVTLL-VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYL 300
+ L C +T L V EFV+ G L +I + S+ + AAE SA+ +L
Sbjct: 84 PFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARF-YAAEIISALMFL 140
Query: 301 HSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEY 360
H II+ D+K N+LLD K++DF + T + GT Y+ PE
Sbjct: 141 HD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEI 195
Query: 361 AHTELLTG 368
E+L G
Sbjct: 196 LQ-EMLYG 202
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---K 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 424 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 479
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 480 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 514
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 55/98 (56%), Gaps = 7/98 (7%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
++ Q+ + +V+++G+C E + +LV E G L+ Y+ + ++ +K+ K + + +
Sbjct: 423 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL--QQNRHVKD-KNIIELVHQV 478
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + YL + +H D+ + N+LL + AK+SDF
Sbjct: 479 SMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDF 513
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 120
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 121 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 174
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 175 NIFGTPEFVAPEIVNYEPL 193
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
+V E+V L +H + K + + A+ A+++ H IIH DVK AN
Sbjct: 110 IVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 163
Query: 318 ILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYA 361
I++ KV DF I+ S + + + GT YL PE A
Sbjct: 164 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 208
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 64 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 120
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 121 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 174
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 175 NIFGTPEFVAPEIVNYEPL 193
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF---K 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 70/173 (40%), Gaps = 19/173 (10%)
Query: 194 LGMGGFGSVYKGVLPDNT---QVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V++ + D Q AVKK + + E L + + +V + G
Sbjct: 82 LGRGSFGEVHR--MEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAV 135
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + E + G+L + K L + L + + YLHS I+H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRA-LYYLGQALEGLEYLHSR---RILH 189
Query: 311 SDVKSANILL-DDNYTAKVSDFESLVPISSDD---ETAMSTMIRGTVGYLDPE 359
DVK+ N+LL D A + DF V + D + I GT ++ PE
Sbjct: 190 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPE 242
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
+V E+V L +H + K + + A+ A+++ H IIH DVK AN
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 318 ILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYA 361
I++ KV DF I+ S + + + GT YL PE A
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
+V E+V L +H + K + + A+ A+++ H IIH DVK AN
Sbjct: 93 IVMEYVDGVTLRDIVHTEGPM---TPKRAIEVIADACQALNFSHQNG---IIHRDVKPAN 146
Query: 318 ILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYA 361
I++ KV DF I+ S + + + GT YL PE A
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQA 191
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 13/143 (9%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM---CADEIR--ITEWEFLGIISQVKHKNVVKILG 248
LG G FG VYK + +A K + +E+ I E E I++ H +VK+LG
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE---ILATCDHPYIVKLLG 83
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
++ EF GA+ + + + + + + A+++LHS I
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE--PQIQVVCRQMLEALNFLHS---KRI 138
Query: 309 IHSDVKSANILLDDNYTAKVSDF 331
IH D+K+ N+L+ +++DF
Sbjct: 139 IHRDLKAGNVLMTLEGDIRLADF 161
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 41/209 (19%)
Query: 191 HHCLGMGGFGSVYKGVLPDNTQV----AVKK--YMCADEIRITEWEFLGIISQVKHKNVV 244
H LG G FG V+ Q A+KK + D++ T E ++S +
Sbjct: 23 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVE-KRVLSLAWEHPFL 81
Query: 245 KILGLCLETKVTLL-VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSL 303
+ +TK L V E+++ G L ++I L AAE + +LHS
Sbjct: 82 THMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSR---ATFYAAEIILGLQFLHS- 137
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDF----ESLVPISSDDETAMSTMIRGTVGYLDPE 359
I++ D+K NILLD + K++DF E+++ + +E GT Y+ PE
Sbjct: 138 --KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFC------GTPDYIAPE 189
Query: 360 ------YAHT-----------ELLTGMNP 371
Y H+ E+L G +P
Sbjct: 190 ILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF--------LGIISQVKHKNVVK 245
LG G + +VYKG+ N V Y+ E+++ E + ++ ++KH+N+V+
Sbjct: 13 LGNGTYATVYKGL---NKTTGV--YVALKEVKLDSEEGTPSTAIREISLMKELKHENIVR 67
Query: 246 ILGLC-LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
+ + E K+T LV+EF+ N L Y+ S+ + N L + L LA
Sbjct: 68 LYDVIHTENKLT-LVFEFMDN-DLKKYM---DSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 305 ---SPSIIHSDVKSANILLDDNYTAKVSDF 331
I+H D+K N+L++ K+ DF
Sbjct: 123 FCHENKILHRDLKPQNLLINKRGQLKLGDF 152
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 13/143 (9%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM---CADEIR--ITEWEFLGIISQVKHKNVVKILG 248
LG G FG VYK + +A K + +E+ I E E I++ H +VK+LG
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIE---ILATCDHPYIVKLLG 75
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
++ EF GA+ + + + + + + A+++LHS I
Sbjct: 76 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTE--PQIQVVCRQMLEALNFLHS---KRI 130
Query: 309 IHSDVKSANILLDDNYTAKVSDF 331
IH D+K+ N+L+ +++DF
Sbjct: 131 IHRDLKAGNVLMTLEGDIRLADF 153
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 13/139 (9%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
+ I+ +++H NV+ + + +L+ E V+ G L ++ +K S + L+
Sbjct: 65 VSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLK--- 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA----KVSDFESLVPISSDDETAMST 347
+ + ++YLHSL I H D+K NI+L D K+ DF I +E
Sbjct: 122 QILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK--- 175
Query: 348 MIRGTVGYLDPEYAHTELL 366
I GT ++ PE + E L
Sbjct: 176 NIFGTPEFVAPEIVNYEPL 194
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 17/136 (12%)
Query: 234 IISQVKHKNVVKILGLCL--ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIA- 290
++ +++HKNV++++ + E + +V E+ G + D + K + C
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGM--QEMLDSVPE--KRFPVCQAHGY 114
Query: 291 -AETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF---ESLVPISSDDETAMS 346
+ + YLHS I+H D+K N+LL T K+S E+L P ++DD S
Sbjct: 115 FCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS 171
Query: 347 TMIRGTVGYLDPEYAH 362
+G+ + PE A+
Sbjct: 172 ---QGSPAFQPPEIAN 184
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 69/173 (39%), Gaps = 19/173 (10%)
Query: 194 LGMGGFGSVYKGVLPDNT---QVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V++ + D Q AVKK + + E L + + +V + G
Sbjct: 101 LGRGSFGEVHR--MEDKQTGFQCAVKKV----RLEVFRAEELMACAGLTSPRIVPLYGAV 154
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + E + G+L + K L + L + + YLHS I+H
Sbjct: 155 REGPWVNIFMELLEGGSLGQLV--KEQGCLPEDRA-LYYLGQALEGLEYLHSR---RILH 208
Query: 311 SDVKSANILL-DDNYTAKVSDFESLVPISSDD---ETAMSTMIRGTVGYLDPE 359
DVK+ N+LL D A + DF V + D I GT ++ PE
Sbjct: 209 GDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPE 261
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 291 AETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
AE AI +H L +H D+K NIL+D N +++DF S + + +D T S++
Sbjct: 182 AEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKL-MEDGTVQSSVAV 237
Query: 351 GTVGYLDPE 359
GT Y+ PE
Sbjct: 238 GTPDYISPE 246
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 18/174 (10%)
Query: 194 LGMGGFGSVYKGVL----PDNTQVAVKKY----MCADEIRITEWEFLGIISQVKHKNVVK 245
+G G FG K +L D Q +K+ M + E + E + +++ +KH N+V+
Sbjct: 32 IGEGSFG---KAILVKSTEDGRQYVIKEINISRMSSKEREESRRE-VAVLANMKHPNIVQ 87
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
E +V ++ G L I+ + VL L + A+ ++H
Sbjct: 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKG-VLFQEDQILDWFVQICLALKHVHDR-- 144
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H D+KS NI L + T ++ DF ++S E A + + GT YL PE
Sbjct: 145 -KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACI--GTPYYLSPE 195
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEW--EFL---GIISQVKHKNVVK 245
LG G FG V +G P V+V K + D + E +F+ + + H+N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ G+ L T +V E G+L + L T R A + A + YL S
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 139
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYAHT 363
IH D+ + N+LL K+ DF + + +DD M + + PE T
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 198
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRG 351
+T A+ +LHS ++H DVK ANI L K+ DF LV + T G
Sbjct: 165 DTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLV--------ELGTAGAG 213
Query: 352 TVGYLDPEYAHTELLTG 368
V DP Y ELL G
Sbjct: 214 EVQEGDPRYMAPELLQG 230
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLDHCNIVR------- 77
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 78 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 128
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 194 LGMGGFGS-VYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
LG G G+ VY+G+ DN VAVK+ + + + E + +H NV++ +
Sbjct: 32 LGHGAEGTIVYRGMF-DNRDVAVKRIL-PECFSFADREVQLLRESDEHPNVIRYFCTEKD 89
Query: 253 TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSD 312
+ + E + L Y+ K L L +T S + +LHSL +I+H D
Sbjct: 90 RQFQYIAIELCA-ATLQEYVEQKDFAHLGLEPITL--LQQTTSGLAHLHSL---NIVHRD 143
Query: 313 VKSANILLD-----DNYTAKVSDFESLVPISSDDET-AMSTMIRGTVGYLDPE 359
+K NIL+ A +SDF ++ + + + + GT G++ PE
Sbjct: 144 LKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEW--EFL---GIISQVKHKNVVK 245
LG G FG V +G P V+V K + D + E +F+ + + H+N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ G+ L T +V E G+L + L T R A + A + YL S
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 129
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYAHT 363
IH D+ + N+LL K+ DF + + +DD M + + PE T
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKT 188
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLDHCNIVR------- 77
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 78 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 128
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 83/182 (45%), Gaps = 25/182 (13%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIA 290
+G++ ++ H N++K+ + ET + LV E V+ G L I +K ++ ++
Sbjct: 99 IGVLLRLSHPNIIKLKEI-FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK-- 155
Query: 291 AETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMST 347
+ A+ YLH I+H D+K N+L + K++DF L I + + M T
Sbjct: 156 -QILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADF-GLSKI-VEHQVLMKT 209
Query: 348 MIRGTVGYLDPE------YAHTELLTGMNPNSYVALASNEKISMVPYFLDSIENNSFRQI 401
+ GT GY PE Y + + +Y+ L E P++ + + FR+I
Sbjct: 210 VC-GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE-----PFYDERGDQFMFRRI 263
Query: 402 LN 403
LN
Sbjct: 264 LN 265
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 84/178 (47%), Gaps = 21/178 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVK-----KYMCADEIRITEWEFLGIISQVKHKNVVKIL 247
LG G +V++G + A+K ++ ++++ E+E ++ ++ HKN+VK+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE---VLKKLNHKNIVKLF 73
Query: 248 GLCLE--TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ E T+ +L+ EF G+L + + S+ L + + +++L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 306 PSIIHSDVKSANILL----DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H ++K NI+ D K++DF + + DDE +S + GT YL P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL-EDDEQFVS--LYGTEEYLHPD 185
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEW--EFL---GIISQVKHKNVVK 245
LG G FG V +G P V+V K + D + E +F+ + + H+N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ G+ L T +V E G+L + L T R A + A + YL S
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 133
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYAHT 363
IH D+ + N+LL K+ DF + + +DD M + + PE T
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS +++ D+K N
Sbjct: 82 FVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIKLEN 135
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M GT YL PE
Sbjct: 136 LMLDKDGHIKITDF-GLCKEGISDGATMKXFC-GTPEYLAPE 175
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G+V+K + + VA+K+ D+ + + + ++ ++KHKN+V++ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIH---DKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
K LV+EF ++ D +++K++ + + + HS
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF------LFQLLKGLGFCHSR--- 120
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+++H D+K N+L++ N K++DF
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLADF 145
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS +++ D+K N
Sbjct: 82 FVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIKLEN 135
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M GT YL PE
Sbjct: 136 LMLDKDGHIKITDF-GLCKEGISDGATMKXFC-GTPEYLAPE 175
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 291 AETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIR 350
AE AI +H L +H D+K NILLD +++DF S + + +D T S +
Sbjct: 169 AEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG-TVRSLVAV 224
Query: 351 GTVGYLDPE 359
GT YL PE
Sbjct: 225 GTPDYLSPE 233
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS +++ D+K N
Sbjct: 87 FVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIKLEN 140
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M GT YL PE
Sbjct: 141 LMLDKDGHIKITDF-GLCKEGISDGATMKXFC-GTPEYLAPE 180
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 68/157 (43%), Gaps = 14/157 (8%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEW--EFL---GIISQVKHKNVVK 245
LG G FG V +G P V+V K + D + E +F+ + + H+N+++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ G+ L T +V E G+L + L T R A + A + YL S
Sbjct: 86 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 139
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
IH D+ + N+LL K+ DF + + +D+
Sbjct: 140 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEW--EFL---GIISQVKHKNVVK 245
LG G FG V +G P V+V K + D + E +F+ + + H+N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ G+ L T +V E G+L + L T R A + A + YL S
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 129
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYAHT 363
IH D+ + N+LL K+ DF + + +DD M + + PE T
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS +++ D+K N
Sbjct: 82 FVMEYANGGEL--FFHLSRERVFTEERARF-YGAEIVSALEYLHSR---DVVYRDIKLEN 135
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M GT YL PE
Sbjct: 136 LMLDKDGHIKITDF-GLCKEGISDGATMKXFC-GTPEYLAPE 175
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEW--EFL---GIISQVKHKNVVK 245
LG G FG V +G P V+V K + D + E +F+ + + H+N+++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ G+ L T +V E G+L + L T R A + A + YL S
Sbjct: 80 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 133
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYAHT 363
IH D+ + N+LL K+ DF + + +DD M + + PE T
Sbjct: 134 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 192
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 15/179 (8%)
Query: 194 LGMGGFGSVYKGVL--PDNTQVAVK-KYMCADEIRITEW--EFL---GIISQVKHKNVVK 245
LG G FG V +G P V+V K + D + E +F+ + + H+N+++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ G+ L T +V E G+L + L T R A + A + YL S
Sbjct: 76 LYGVVL-TPPMKMVTELAPLGSLLDRLRKHQGHFLLG--TLSRYAVQVAEGMGYLES--- 129
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDFESLVPIS-SDDETAMSTMIRGTVGYLDPEYAHT 363
IH D+ + N+LL K+ DF + + +DD M + + PE T
Sbjct: 130 KRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKT 188
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 78
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 79 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 129
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 130 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 170
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 77
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 78 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 128
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 77
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 78 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 128
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 11/142 (7%)
Query: 194 LGMGGFGSVYKGV--LPDNTQVAVKKYMCADE--IRITEWEFLGIISQVKHKNVVKILGL 249
LG G + +VYKG L DN VA+K+ E T + ++ +KH N+V + +
Sbjct: 10 LGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 68
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
K LV+E++ L Y+ D + + N + + Y H ++
Sbjct: 69 IHTEKSLTLVFEYLDKD-LKQYLDDCGNII--NMHNVKLFLFQLLRGLAYCHR---QKVL 122
Query: 310 HSDVKSANILLDDNYTAKVSDF 331
H D+K N+L+++ K++DF
Sbjct: 123 HRDLKPQNLLINERGELKLADF 144
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 96
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 97 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 147
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 148 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 188
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 77
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 78 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 128
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 32/197 (16%)
Query: 182 ELLKATKNFHHCLGMGGFGSVYKG-VLPDNTQVAVK---------------KYMCADEIR 225
E +A LG GGFG+V+ G L D QVA+K C E+
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 226 ITEWEFLGIISQVKHKNVVKILGLCLETKVTLLVYE-FVSNGALSHYIHDKSSQVLKNWK 284
+ W+ + + H V+++L + +LV E + L YI +K + +
Sbjct: 87 LL-WK---VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGP-LGEGPS 141
Query: 285 TCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFESLVPISSDDET 343
C + +AI + HS ++H D+K NIL+D AK+ DF S + + T
Sbjct: 142 RCF--FGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYT 196
Query: 344 AMSTMIRGTVGYLDPEY 360
GT Y PE+
Sbjct: 197 DFD----GTRVYSPPEW 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 85
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 86 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 136
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 137 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 177
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 77
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 78 -----LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 128
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 129 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 89
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 90 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 140
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 141 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 181
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 81
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 82 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 132
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 133 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 173
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 90
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 91 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 141
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 142 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 182
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 89
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 90 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 140
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 141 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 181
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 111
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 112 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 162
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 163 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 203
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 105
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 106 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 156
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 157 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 111
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 112 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 162
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 163 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 194 LGMGGFGSVYKGV-----LPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG G F V + V L ++ K + A + + E E I +++H N+V++
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-ARICRKLQHPNIVRLHD 95
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
E LV++ V+ G L I + + C++ E+ I Y H S I
Sbjct: 96 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCH---SNGI 149
Query: 309 IHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H ++K N+LL K++DF + I +D A GT GYL PE
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFG--LAIEVNDSEAWHGFA-GTPGYLSPE 200
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS ++++ D+K N
Sbjct: 86 FVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHS--EKNVVYRDLKLEN 140
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M GT YL PE
Sbjct: 141 LMLDKDGHIKITDF-GLCKEGIKDGATMKXFC-GTPEYLAPE 180
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 115
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 116 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 166
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 167 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 207
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVK-----KYMCADEIRITEWEFLGIISQVKHKNVVKIL 247
LG G +V++G + A+K ++ ++++ E+E ++ ++ HKN+VK+
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFE---VLKKLNHKNIVKLF 73
Query: 248 GLCLE--TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ E T+ +L+ EF G+L + + S+ L + + +++L
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---E 130
Query: 306 PSIIHSDVKSANILL----DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H ++K NI+ D K++DF + + D++ + GT YL P+
Sbjct: 131 NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQF---VXLYGTEEYLHPD 185
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS ++++ D+K N
Sbjct: 85 FVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHS--EKNVVYRDLKLEN 139
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M GT YL PE
Sbjct: 140 LMLDKDGHIKITDF-GLCKEGIKDGATMKXFC-GTPEYLAPE 179
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 82
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 83 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 133
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 134 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 174
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 113
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 114 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 164
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 165 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 46/164 (28%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE---LQIMRKLDHCNIVR------- 156
Query: 253 TKVTLLVYEFVSNGA---------LSHYIHDKSSQVLKNWKTCLRIAAETASAIH----- 298
L Y F S+G + Y+ + +V +++ A +T I+
Sbjct: 157 -----LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSR----AKQTLPVIYVKLYM 207
Query: 299 --------YLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 208 YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 248
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 68/167 (40%), Gaps = 52/167 (31%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
+G G FG VY+ L D+ + VA+KK + + E L I+ ++ H N+V+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE---LQIMRKLDHCNIVR------- 77
Query: 253 TKVTLLVYEFVSNGALSHYIHDKSSQVLKNW------KTCLRIAAETASA---------- 296
L Y F S+G +K +V N T R+A + A
Sbjct: 78 -----LRYFFYSSG-------EKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVK 125
Query: 297 ---------IHYLHSLASPSIIHSDVKSANILLD-DNYTAKVSDFES 333
+ Y+HS I H D+K N+LLD D K+ DF S
Sbjct: 126 LYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGS 169
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 7/102 (6%)
Query: 258 LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSAN 317
V E+ + G L + H +V + AE SA+ YLHS ++++ D+K N
Sbjct: 87 FVMEYANGGEL--FFHLSRERVFSEDRARF-YGAEIVSALDYLHS--EKNVVYRDLKLEN 141
Query: 318 ILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
++LD + K++DF L D M GT YL PE
Sbjct: 142 LMLDKDGHIKITDF-GLCKEGIKDGATMKXFC-GTPEYLAPE 181
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 194 LGMGGFGSVYKGVLPDNTQ--VAVKKY--------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G V+K N VA+K+ M IR E L + +H NV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR--EVAVLRHLETFEHPNV 76
Query: 244 VKILGLCL------ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
V++ +C ETK+TL V+E V L+ Y+ DK + +T + + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTL-VFEHVDQD-LTTYL-DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+LHS ++H D+K NIL+ + K++DF
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 194 LGMGGFGSVYKGVLPDNTQ--VAVKKY--------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G V+K N VA+K+ M IR E L + +H NV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR--EVAVLRHLETFEHPNV 76
Query: 244 VKILGLCL------ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
V++ +C ETK+TL V+E V L+ Y+ DK + +T + + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTL-VFEHVDQD-LTTYL-DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+LHS ++H D+K NIL+ + K++DF
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 194 LGMGGFGSVYKGV-----LPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG G F V + V L ++ K + A + + E E I +++H N+V++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-ARICRKLQHPNIVRLHD 72
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
E LV++ V+ G L I + + C++ E+ I Y H S I
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCH---SNGI 126
Query: 309 IHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H ++K N+LL K++DF + I +D A GT GYL PE
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFG--LAIEVNDSEAWHGFA-GTPGYLSPE 177
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 194 LGMGGFGSVYKGV-----LPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG G F V + V L ++ K + A + + E E I +++H N+V++
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-ARICRKLQHPNIVRLHD 72
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
E LV++ V+ G L I + + C++ E+ I Y H S I
Sbjct: 73 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCH---SNGI 126
Query: 309 IHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H ++K N+LL K++DF + I +D A GT GYL PE
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFG--LAIEVNDSEAWHGFA-GTPGYLSPE 177
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 75/174 (43%), Gaps = 18/174 (10%)
Query: 194 LGMGGFGSVYKGV-----LPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG G F V + V L ++ K + A + + E E I +++H N+V++
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-ARICRKLQHPNIVRLHD 71
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
E LV++ V+ G L I + + C++ E+ I Y H S I
Sbjct: 72 SIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES---IAYCH---SNGI 125
Query: 309 IHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H ++K N+LL K++DF + I +D A GT GYL PE
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFG--LAIEVNDSEAWHGFA-GTPGYLSPE 176
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 24/154 (15%)
Query: 194 LGMGGFGSVYKGVLPDNTQ--VAVKKY--------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G V+K N VA+K+ M IR E L + +H NV
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR--EVAVLRHLETFEHPNV 76
Query: 244 VKILGLCL------ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
V++ +C ETK+TL V+E V L+ Y+ DK + +T + + +
Sbjct: 77 VRLFDVCTVSRTDRETKLTL-VFEHVDQD-LTTYL-DKVPEPGVPTETIKDMMFQLLRGL 133
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+LHS ++H D+K NIL+ + K++DF
Sbjct: 134 DFLHSH---RVVHRDLKPQNILVTSSGQIKLADF 164
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 19/173 (10%)
Query: 194 LGMGGFGSVYKGVLPDNT---QVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V++ + D Q AVKK + + E L + + +V + G
Sbjct: 80 LGRGSFGEVHR--MKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAV 133
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + E + G+L I K L + L + + YLH+ I+H
Sbjct: 134 REGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRA-LYYLGQALEGLEYLHTR---RILH 187
Query: 311 SDVKSANILL-DDNYTAKVSDFE---SLVPISSDDETAMSTMIRGTVGYLDPE 359
DVK+ N+LL D A + DF L P I GT ++ PE
Sbjct: 188 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I +KH N+V++ E L+++ V+ G L I + + C++ +
Sbjct: 74 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 130
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNY---TAKVSDFESLVPISSDDETAMSTMIR 350
A+ + H + ++H D+K N+LL K++DF + + + +
Sbjct: 131 LEAVLHCHQMG---VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FA 185
Query: 351 GTVGYLDPE 359
GT GYL PE
Sbjct: 186 GTPGYLSPE 194
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 8/127 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE 292
++ ++ + L +T+ L L+ ++++ G L + H + + + + E
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVG-E 167
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGT 352
A+ +LH L II+ D+K NILLD N ++DF L DET + GT
Sbjct: 168 IVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDF-GLSKEFVADETERAYDFCGT 223
Query: 353 VGYLDPE 359
+ Y+ P+
Sbjct: 224 IEYMAPD 230
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 72/145 (49%), Gaps = 16/145 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQ-VAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G+V+K + + VA+K+ D+ + + + ++ ++KHKN+V++ +
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIH---DKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
K LV+EF ++ D +++K++ + + + HS
Sbjct: 70 LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSF------LFQLLKGLGFCHSR--- 120
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
+++H D+K N+L++ N K+++F
Sbjct: 121 NVLHRDLKPQNLLINRNGELKLANF 145
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRG 351
+T + YLH+ +IH D+K N+ L+D+ K+ DF I D E + + G
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT--LCG 204
Query: 352 TVGYLDPE 359
T Y+ PE
Sbjct: 205 TPNYIAPE 212
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGLC 250
+G G +G VYK VA+K+ E I T + ++ ++ H N+V ++ +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SPS 307
+ LV+EF+ +VL KT L+ + L +A
Sbjct: 89 HSERCLTLVFEFMEKDL---------KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 308 IIHSDVKSANILLDDNYTAKVSDF 331
I+H D+K N+L++ + K++DF
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADF 163
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRG 351
+T + YLH+ +IH D+K N+ L+D+ K+ DF I D E + G
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER--KKXLCG 204
Query: 352 TVGYLDPE 359
T Y+ PE
Sbjct: 205 TPNYIAPE 212
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 15/144 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGLC 250
+G G +G VYK VA+K+ E I T + ++ ++ H N+V ++ +
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SPS 307
+ LV+EF+ +VL KT L+ + L +A
Sbjct: 89 HSERCLTLVFEFMEKDL---------KKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 308 IIHSDVKSANILLDDNYTAKVSDF 331
I+H D+K N+L++ + K++DF
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADF 163
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRG 351
+T + YLH+ +IH D+K N+ L+D+ K+ DF I D E + G
Sbjct: 134 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCG 188
Query: 352 TVGYLDPE 359
T Y+ PE
Sbjct: 189 TPNYIAPE 196
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 246 ILGL--CLETKVTLL-VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
++GL C +T+ L V E+V+ G L ++ + ++ + +AE + A++YLH
Sbjct: 83 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLALNYLHE 139
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDF----ESLVPISSDDETAMSTMIRGTVGYLDP 358
II+ D+K N+LLD K++D+ E L P + ++ GT Y+ P
Sbjct: 140 RG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TSXFCGTPNYIAP 190
Query: 359 EYAHTE 364
E E
Sbjct: 191 EILRGE 196
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLL-VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAE 292
+ Q + + L C +T+ L V E+V+ G L ++ + ++ + +AE
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAE 161
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF----ESLVPISSDDETAMSTM 348
+ A++YLH II+ D+K N+LLD K++D+ E L P + ++
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TST 212
Query: 349 IRGTVGYLDPEYAHTE 364
GT Y+ PE E
Sbjct: 213 FCGTPNYIAPEILRGE 228
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 58
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E + L +I ++ + L+ +
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQE-EL 115
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 116 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 168
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 169 VYTDFDGTRVYSPPEW 184
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRG 351
+T + YLH+ +IH D+K N+ L+D+ K+ DF I D E + G
Sbjct: 150 QTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKD--LCG 204
Query: 352 TVGYLDPE 359
T Y+ PE
Sbjct: 205 TPNYIAPE 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 246 ILGL--CLETKVTLL-VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
++GL C +T+ L V E+V+ G L ++ + ++ + +AE + A++YLH
Sbjct: 72 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLALNYLHE 128
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDF----ESLVPISSDDETAMSTMIRGTVGYLDP 358
II+ D+K N+LLD K++D+ E L P + ++ GT Y+ P
Sbjct: 129 RG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TSXFCGTPNYIAP 179
Query: 359 EYAHTE 364
E E
Sbjct: 180 EILRGE 185
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 19/126 (15%)
Query: 246 ILGL--CLETKVTLL-VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
++GL C +T+ L V E+V+ G L ++ + ++ + +AE + A++YLH
Sbjct: 68 LVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARF---YSAEISLALNYLHE 124
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDF----ESLVPISSDDETAMSTMIRGTVGYLDP 358
II+ D+K N+LLD K++D+ E L P + ++ GT Y+ P
Sbjct: 125 RG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------TSXFCGTPNYIAP 175
Query: 359 EYAHTE 364
E E
Sbjct: 176 EILRGE 181
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 19/173 (10%)
Query: 194 LGMGGFGSVYKGVLPDNT---QVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
+G G FG V++ + D Q AVKK + + E L + + +V + G
Sbjct: 66 VGRGSFGEVHR--MKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAV 119
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + E + G+L I K L + L + + YLH+ I+H
Sbjct: 120 REGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRA-LYYLGQALEGLEYLHTR---RILH 173
Query: 311 SDVKSANILL-DDNYTAKVSDFE---SLVPISSDDETAMSTMIRGTVGYLDPE 359
DVK+ N+LL D A + DF L P I GT ++ PE
Sbjct: 174 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGLC 250
+G G +G VYK A+KK E I T + I+ ++KH N+VK+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP---- 306
K +LV+E + Q LK E+ +A +L L +
Sbjct: 70 HTKKRLVLVFEHL-------------DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 307 ---SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADF 144
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGLC 250
+G G +G VYK A+KK E I T + I+ ++KH N+VK+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP---- 306
K +LV+E + Q LK E+ +A +L L +
Sbjct: 70 HTKKRLVLVFEHL-------------DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 307 ---SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADF 144
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGLC 250
+G G +G VYK A+KK E I T + I+ ++KH N+VK+ +
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP---- 306
K +LV+E + Q LK E+ +A +L L +
Sbjct: 70 HTKKRLVLVFEHL-------------DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 307 ---SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADF 144
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 68/173 (39%), Gaps = 19/173 (10%)
Query: 194 LGMGGFGSVYKGVLPDNT---QVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLC 250
+G G FG V++ + D Q AVKK + + E L + + +V + G
Sbjct: 82 VGRGSFGEVHR--MKDKQTGFQCAVKKV----RLEVFRVEELVACAGLSSPRIVPLYGAV 135
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
E + E + G+L I K L + L + + YLH+ I+H
Sbjct: 136 REGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRA-LYYLGQALEGLEYLHTR---RILH 189
Query: 311 SDVKSANILL-DDNYTAKVSDFE---SLVPISSDDETAMSTMIRGTVGYLDPE 359
DVK+ N+LL D A + DF L P I GT ++ PE
Sbjct: 190 GDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 242
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 24/164 (14%)
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF---ESLVPISSDDETA 344
+IA A+ +LHS S +IH DVK +N+L++ K+ DF LV ++
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLV------DSV 208
Query: 345 MSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALAS--NEKISMV-------PYFLDSIEN 395
T+ G Y+ PE + EL N Y + + I+M+ PY
Sbjct: 209 AKTIDAGCKPYMAPERINPEL----NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 264
Query: 396 NSFRQILNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEV 439
+Q++ S+CL+ ERPT E+
Sbjct: 265 QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 194 LGMGGFGSV---YKGVLPDNTQ--VAVKK--YMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FGSV L DNT VAVK+ + D+ R + E + I+ + +VK
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE-IQILKALHSDFIVKY 76
Query: 247 LGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G+ + LV E++ +G L ++ +++ + L +++ + YL
Sbjct: 77 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL---G 131
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF--ESLVPISSD 340
S +H D+ + NIL++ K++DF L+P+ D
Sbjct: 132 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 169
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH------DKSSQVLKNWKTCLR 288
+SQ H N+V + LV + +S G++ I + S VL T
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE-STIAT 125
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I E + YLH IH DVK+ NILL ++ + +++DF
Sbjct: 126 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADF 165
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 34/181 (18%)
Query: 194 LGMGGFGSVYKGVLPD-NTQVAVKKYMCADEIRITE-WEFLGIISQVKHKNVVKILGLCL 251
LG GG G V+ V D + +VA+KK + D + + II ++ H N+VK+ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 252 ETKVTLL-----VYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA----ETASAIHYLHS 302
+ L + E S + Y+ + VL+ A + + Y+HS
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 303 LASPSIIHSDVKSANILLD-DNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYA 361
+++H D+K AN+ ++ ++ K+ DF G +DP Y+
Sbjct: 139 ---ANVLHRDLKPANLFINTEDLVLKIGDF-------------------GLARIMDPHYS 176
Query: 362 H 362
H
Sbjct: 177 H 177
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 177 IFSKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQV-AVKK----YMCADEIRITEWEF 231
+ K EL+K LG G +G V+K + +V AVKK + + + + T E
Sbjct: 7 VLRKYELVKK-------LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREI 59
Query: 232 LGIISQVKHKNVVKILGLCL--ETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI 289
+ + H+N+V +L + + LV++++ + + V K + +
Sbjct: 60 MILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY-----V 114
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I YLHS ++H D+K +NILL+ KV+DF
Sbjct: 115 VYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADF 153
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAA 291
I+ ++ H ++KI + + +V E + G L DK ++ LK TC
Sbjct: 193 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKE-ATCKLYFY 246
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ A+ YLH IIH D+K N+LL +++ K++DF + ET++
Sbjct: 247 QMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 300
Query: 349 IRGTVGYLDPE 359
+ GT YL PE
Sbjct: 301 LCGTPTYLAPE 311
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 11/129 (8%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I +KH N+V++ E L+++ V+ G L I + + C++ +
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 119
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNY---TAKVSDFESLVPISSDDETAMSTMIR 350
A+ + H + ++H ++K N+LL K++DF + + + +
Sbjct: 120 LEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG--FA 174
Query: 351 GTVGYLDPE 359
GT GYL PE
Sbjct: 175 GTPGYLSPE 183
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 194 LGMGGFGSV---YKGVLPDNTQ--VAVKK--YMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FGSV L DNT VAVK+ + D+ R + E + I+ + +VK
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE-IQILKALHSDFIVKY 77
Query: 247 LGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G+ + LV E++ +G L ++ +++ + L +++ + YL
Sbjct: 78 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL---G 132
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF--ESLVPISSD 340
S +H D+ + NIL++ K++DF L+P+ D
Sbjct: 133 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 170
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 194 LGMGGFGSV---YKGVLPDNTQ--VAVKK--YMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FGSV L DNT VAVK+ + D+ R + E + I+ + +VK
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE-IQILKALHSDFIVKY 89
Query: 247 LGLCLET--KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G+ + LV E++ +G L ++ +++ + L +++ + YL
Sbjct: 90 RGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL---G 144
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF--ESLVPISSD 340
S +H D+ + NIL++ K++DF L+P+ D
Sbjct: 145 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 194 LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEI----RITEWEFLGIISQVKHKNVVKILG 248
+G G +G V QVA+KK A ++ + T E L I+ KH N++ I
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAIKD 120
Query: 249 LCLET------KVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHS 302
+ T K +V + + + L IH L++ + L + + Y+HS
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESD-LHQIIHSSQPLTLEHVRYFLY---QLLRGLKYMHS 176
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDF 331
+IH D+K +N+L+++N K+ DF
Sbjct: 177 A---QVIHRDLKPSNLLVNENCELKIGDF 202
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAA 291
I+ ++ H ++KI + + +V E + G L DK ++ LK TC
Sbjct: 207 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKE-ATCKLYFY 260
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ A+ YLH IIH D+K N+LL +++ K++DF + ET++
Sbjct: 261 QMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 314
Query: 349 IRGTVGYLDPE 359
+ GT YL PE
Sbjct: 315 LCGTPTYLAPE 325
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 2 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 58
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 59 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 115
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 116 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 168
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 169 VYTDFDGTRVYSPPEW 184
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 10/103 (9%)
Query: 235 ISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIH------DKSSQVLKNWKTCLR 288
+SQ H N+V + LV + +S G++ I + S VL T
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDE-STIAT 120
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I E + YLH IH DVK+ NILL ++ + +++DF
Sbjct: 121 ILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADF 160
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 59
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 116
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 117 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 169
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 170 VYTDFDGTRVYSPPEW 185
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 194 LGMGGFGSV---YKGVLPDNTQ--VAVKK--YMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G FGSV L DNT VAVK+ + D+ R + E + I+ + +VK
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQRE-IQILKALHSDFIVKY 73
Query: 247 LGLCLETKVT--LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
G+ LV E++ +G L ++ +++ + L +++ + YL
Sbjct: 74 RGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL---G 128
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF--ESLVPISSD 340
S +H D+ + NIL++ K++DF L+P+ D
Sbjct: 129 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 166
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 59
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 116
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 117 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 169
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 170 VYTDFDGTRVYSPPEW 185
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 1 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 57
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 58 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 114
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S +
Sbjct: 115 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALLKD----T 167
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 168 VYTDFDGTRVYSPPEW 183
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 212 QVAVKKYMCADEI----RITEWEFLGIISQVKHKNVVKILGLCLET------KVTLLVYE 261
QVA+KK A ++ + T E L I+ KH N++ I + T K +V +
Sbjct: 82 QVAIKKIPNAFDVVTNAKRTLRE-LKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLD 140
Query: 262 FVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLD 321
+ + L IH L++ + L + + Y+HS +IH D+K +N+L++
Sbjct: 141 LMESD-LHQIIHSSQPLTLEHVRYFLY---QLLRGLKYMHSA---QVIHRDLKPSNLLVN 193
Query: 322 DNYTAKVSDF 331
+N K+ DF
Sbjct: 194 ENCELKIGDF 203
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 3 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 59
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 60 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 116
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 117 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 169
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 170 VYTDFDGTRVYSPPEW 185
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 22/150 (14%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
LG G +G VYK + N VA+K+ E + T + ++ +++H+N++++ +
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSV 101
Query: 250 CLETKVTLLVYEFVSNGALSHYI---HDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
L++E+ N L Y+ D S +V+K++ L + +++ HS
Sbjct: 102 IHHNHRLHLIFEYAEND-LKKYMDKNPDVSMRVIKSFLYQL------INGVNFCHSR--- 151
Query: 307 SIIHSDVKSANILL-----DDNYTAKVSDF 331
+H D+K N+LL + K+ DF
Sbjct: 152 RCLHRDLKPQNLLLSVSDASETPVLKIGDF 181
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 37/189 (19%)
Query: 190 FHHCLGMGGFGSVY-------------KGVLPDNTQVAVKKYMCADEIRITEWEFLGIIS 236
F LG G FG V+ K + D +QV +++ E+ +
Sbjct: 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEV----------LK 75
Query: 237 QVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI---HDKSSQVLKNWKTCLRIAAET 293
+ H N++KI + + +V E G L I + + + + + +
Sbjct: 76 SLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGY--VAELMKQM 133
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTMIR 350
+A+ Y HS ++H D+K NIL D + K+ DF L + DE ST
Sbjct: 134 MNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDF-GLAELFKSDEH--STNAA 187
Query: 351 GTVGYLDPE 359
GT Y+ PE
Sbjct: 188 GTALYMAPE 196
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 73
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 130
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 131 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 183
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 184 VYTDFDGTRVYSPPEW 199
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 25 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 81
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 82 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 138
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 139 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 191
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 192 VYTDFDGTRVYSPPEW 207
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 15/171 (8%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLET 253
LG G F K V + Q K + T+ E + H N+VK+ + +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQ 78
Query: 254 KVTLLVYEFVSNGALSHYIHDKS--SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
T LV E ++ G L I K S+ ++ I + SA+ ++H + ++H
Sbjct: 79 LHTFLVMELLNGGELFERIKKKKHFSETEASY-----IMRKLVSAVSHMHDVG---VVHR 130
Query: 312 DVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
D+K N+L +DN K+ DF + D + T T+ Y PE
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDF-GFARLKPPDNQPLKTPCF-TLHYAAPE 179
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 72/181 (39%), Gaps = 22/181 (12%)
Query: 189 NFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCAD--------EIRITEWEFLGIISQVKH 240
NF LG G FG V ++ K + D E + E L ++ +
Sbjct: 22 NFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK--- 78
Query: 241 KNVVKILGLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLK-NWKTCLRIAAETASAIH 298
+ L C +T L V E+V+ G L ++I QV K + AAE + +
Sbjct: 79 PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ----QVGKFKEPQAVFYAAEISIGLF 134
Query: 299 YLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDP 358
+LH II+ D+K N++LD K++DF D T GT Y+ P
Sbjct: 135 FLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC--GTPDYIAP 189
Query: 359 E 359
E
Sbjct: 190 E 190
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 20/174 (11%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEI--RITEWEFLGIISQVKHKNVVKILGLCL 251
LG G FG V++ V +V V K++ + T + I++Q+ H ++ +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFE 118
Query: 252 ETKVTLLVYEFVSNGALSHYI----HDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
+ +L+ EF+S G L I + S + N+ +R A E +H S
Sbjct: 119 DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINY---MRQACEGLKHMH------EHS 169
Query: 308 IIHSDVKSANILLDDN--YTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H D+K NI+ + + K+ DF ++ D+ ++T T + PE
Sbjct: 170 IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTT---ATAEFAAPE 220
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 74
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 131
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 132 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 184
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 185 VYTDFDGTRVYSPPEW 200
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 17 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 73
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 74 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 130
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 131 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 183
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 184 VYTDFDGTRVYSPPEW 199
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAA 291
I+ ++ H ++KI + + +V E + G L DK ++ LK TC
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKE-ATCKLYFY 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ A+ YLH IIH D+K N+LL +++ K++DF + ET++
Sbjct: 122 QMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 349 IRGTVGYLDPE 359
+ GT YL PE
Sbjct: 176 LCGTPTYLAPE 186
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 74
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 131
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 132 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 184
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 185 VYTDFDGTRVYSPPEW 200
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 18 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 74
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 75 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 131
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 132 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 184
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 185 VYTDFDGTRVYSPPEW 200
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAA 291
I+ ++ H ++KI + + +V E + G L DK ++ LK TC
Sbjct: 67 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKE-ATCKLYFY 120
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ A+ YLH IIH D+K N+LL +++ K++DF + ET++
Sbjct: 121 QMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 174
Query: 349 IRGTVGYLDPE 359
+ GT YL PE
Sbjct: 175 LCGTPTYLAPE 185
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAA 291
I+ ++ H ++KI + + +V E + G L DK ++ LK TC
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKE-ATCKLYFY 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ A+ YLH IIH D+K N+LL +++ K++DF + ET++
Sbjct: 122 QMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 349 IRGTVGYLDPE 359
+ GT YL PE
Sbjct: 176 LCGTPTYLAPE 186
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHK----------- 241
LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 242 -NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
V+++L +L+ E L +I ++ + L+ + + A+ +
Sbjct: 69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-ELARSFFWQVLEAVRH 125
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETAMSTMIRGTVGYLDP 358
H+ ++H D+K NIL+D N K+ DF S + + + T GT Y P
Sbjct: 126 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 178
Query: 359 EY 360
E+
Sbjct: 179 EW 180
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 86
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 143
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 144 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 196
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 197 VYTDFDGTRVYSPPEW 212
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAA 291
I+ ++ H ++KI + + +V E + G L DK ++ LK TC
Sbjct: 68 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKE-ATCKLYFY 121
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ A+ YLH IIH D+K N+LL +++ K++DF + ET++
Sbjct: 122 QMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 175
Query: 349 IRGTVGYLDPE 359
+ GT YL PE
Sbjct: 176 LCGTPTYLAPE 186
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 101
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 158
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 159 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 211
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 212 VYTDFDGTRVYSPPEW 227
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 66/198 (33%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF---------------------L 232
LG G FG V K C D RIT+ E+ +
Sbjct: 30 LGKGSFGEVLK---------------CKD--RITQQEYAVKVINKASAKNKDTSTILREV 72
Query: 233 GIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--------HDKSSQVLKNWK 284
++ ++ H N++K+ + ++ +V E + G L I HD +
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------- 124
Query: 285 TCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDD 341
RI + S I Y+H +I+H D+K NILL+ + K+ DF +
Sbjct: 125 ---RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFG--LSTCFQQ 176
Query: 342 ETAMSTMIRGTVGYLDPE 359
T M I GT Y+ PE
Sbjct: 177 NTKMKDRI-GTAYYIAPE 193
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHK----------- 241
LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 242 -NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
V+++L +L+ E L +I ++ + L+ + + A+ +
Sbjct: 69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-ELARSFFWQVLEAVRH 125
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETAMSTMIRGTVGYLDP 358
H+ ++H D+K NIL+D N K+ DF S + + + T GT Y P
Sbjct: 126 CHNXG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 178
Query: 359 EY 360
E+
Sbjct: 179 EW 180
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 45 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 101
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 102 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 158
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 159 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 211
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 212 VYTDFDGTRVYSPPEW 227
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H++ I+HSD+K AN L+ D K+ DF + D + + GTV Y+ PE
Sbjct: 120 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 178
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 17/131 (12%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDK--SSQVLKNWKTCLRIAA 291
I+ ++ H ++KI + + +V E + G L DK ++ LK TC
Sbjct: 74 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGEL----FDKVVGNKRLKE-ATCKLYFY 127
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTM 348
+ A+ YLH IIH D+K N+LL +++ K++DF + ET++
Sbjct: 128 QMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG---ETSLMRT 181
Query: 349 IRGTVGYLDPE 359
+ GT YL PE
Sbjct: 182 LCGTPTYLAPE 192
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H++ I+HSD+K AN L+ D K+ DF + D + + GTV Y+ PE
Sbjct: 121 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 179
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 87
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 144
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 145 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 197
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 198 VYTDFDGTRVYSPPEW 213
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 28/182 (15%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHK----------- 241
LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRVPMEVVLLKKVSSGF 68
Query: 242 -NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
V+++L +L+ E L +I ++ + L+ + + A+ +
Sbjct: 69 SGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-ELARSFFWQVLEAVRH 125
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETAMSTMIRGTVGYLDP 358
H+ ++H D+K NIL+D N K+ DF S + + + T GT Y P
Sbjct: 126 CHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVYSPP 178
Query: 359 EY 360
E+
Sbjct: 179 EW 180
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 37 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 93
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 94 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 150
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 151 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 203
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 204 VYTDFDGTRVYSPPEW 219
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 86
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 143
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 144 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 196
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 197 VYTDFDGTRVYSPPEW 212
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 87
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 144
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 145 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 197
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 198 VYTDFDGTRVYSPPEW 213
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 87
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 144
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 145 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 197
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 198 VYTDFDGTRVYSPPEW 213
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 86
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 143
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 144 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 196
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 197 VYTDFDGTRVYSPPEW 212
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 31 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 87
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 88 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 144
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 145 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 197
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 198 VYTDFDGTRVYSPPEW 213
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 30 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 86
Query: 239 KHK------------NVVKILGLCLETKVTLLVYEFVSN-GALSHYIHDKSSQVLKNWKT 285
+ V+++L +L+ E L +I ++ + L+ +
Sbjct: 87 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQE-EL 143
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETA 344
+ A+ + H+ ++H D+K NIL+D N K+ DF S + +
Sbjct: 144 ARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDT 196
Query: 345 MSTMIRGTVGYLDPEY 360
+ T GT Y PE+
Sbjct: 197 VYTDFDGTRVYSPPEW 212
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H++ I+HSD+K AN L+ D K+ DF + D + + GTV Y+ PE
Sbjct: 124 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 182
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 41/185 (22%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V T+VA+KK C +R + I+ + +H+NV
Sbjct: 51 IGEGAYGMVSSAYDHV--RKTRVAIKKISPFEHQTYCQRTLREIQ-----ILLRFRHENV 103
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + + ++ + ++ SQ L N C + + + Y+HS
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLY-QILRGLKYIHS 162
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAH 362
+++H D+K +N+L++ K+ DF G DPE+ H
Sbjct: 163 A---NVLHRDLKPSNLLINTTCDLKICDF-------------------GLARIADPEHDH 200
Query: 363 TELLT 367
T LT
Sbjct: 201 TGFLT 205
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 180 KSELLKATKNFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRITEWEFLGIISQV 238
+ E L++ LG GGFGSVY G+ + DN VA+K ++ RI++W L ++V
Sbjct: 50 EKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKH---VEKDRISDWGELPNGTRV 106
Query: 239 KHKNV-VKILGLCLETKVTLLVY-----EFVSNGALSHYIHDKSSQVLKNWKTCLRIAA- 291
+ V +K + + LL + FV + D + + +A
Sbjct: 107 PMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARS 166
Query: 292 ---ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTA-KVSDFESLVPISSDDETAMST 347
+ A+ + H+ ++H D+K NIL+D N K+ DF S + + + T
Sbjct: 167 FFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYT 219
Query: 348 MIRGTVGYLDPEY 360
GT Y PE+
Sbjct: 220 DFDGTRVYSPPEW 232
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 194 LGMGGFGSVYKGVL-PDNTQVAVKKYMCADE--IRITEWEFLGIISQVKHKNVVKILGL- 249
LG G +G V P VA+KK D+ + + I+ KH+N++ I +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 250 ---CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
E + + + + L I S+Q+L + I +T A+ LH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQYFIY-QTLRAVKVLHG---S 131
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++IH D+K +N+L++ N KV DF
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDF 156
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 194 LGMGGFGSVYKGVL-PDNTQVAVKKYMCADE--IRITEWEFLGIISQVKHKNVVKILGL- 249
LG G +G V P VA+KK D+ + + I+ KH+N++ I +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 250 ---CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
E + + + + L I S+Q+L + I +T A+ LH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQYFIY-QTLRAVKVLHG---S 131
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++IH D+K +N+L++ N KV DF
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDF 156
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H++ I+HSD+K AN L+ D K+ DF + D + + GTV Y+ PE
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 198
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 14/145 (9%)
Query: 194 LGMGGFGSVYKGVL-PDNTQVAVKKYMCADE--IRITEWEFLGIISQVKHKNVVKILGL- 249
LG G +G V P VA+KK D+ + + I+ KH+N++ I +
Sbjct: 19 LGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQ 78
Query: 250 ---CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
E + + + + L I S+Q+L + I +T A+ LH
Sbjct: 79 RPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQYFIY-QTLRAVKVLHG---S 131
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++IH D+K +N+L++ N KV DF
Sbjct: 132 NVIHRDLKPSNLLINSNCDLKVCDF 156
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 18/150 (12%)
Query: 192 HCLGMGGFGSVYKGVLPDNTQ---VAVKKYMCADEIRITEWEFL---GIISQVKHKNVVK 245
H +G G +G V + D + VA+KK + E I L I++++ H +VVK
Sbjct: 59 HLIGTGSYGHVCEAY--DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVK 116
Query: 246 ILGLCLETKVT----LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLH 301
+L + + V L V +++ + KT L + Y+H
Sbjct: 117 VLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLL---YNLLVGVKYVH 173
Query: 302 SLASPSIIHSDVKSANILLDDNYTAKVSDF 331
S I+H D+K AN L++ + + KV DF
Sbjct: 174 SAG---ILHRDLKPANCLVNQDCSVKVCDF 200
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Query: 283 WKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
WK L A+H +H I+HSD+K AN L+ D K+ DF + D
Sbjct: 161 WKNMLE-------AVHTIHQHG---IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTT 209
Query: 343 TAMSTMIRGTVGYLDPE 359
+ + GTV Y+ PE
Sbjct: 210 SVVKDSQVGTVNYMPPE 226
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 13/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-----AVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG GGF ++ D +V K + R + I + H++VV G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ +V E +L + + + LR + YLH +
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHR---NRV 136
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+ L+++ K+ DF + D E ++ GT Y+ PE
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPE 185
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 184 LKATKNFHHC--LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQ 237
L + +NF +G G +G VYK +V A+KK E + T + ++ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
+ H N+VK+L + LV+EF+S L ++ D S+ T + + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKKFM-DASAL------TGIPLPLIKSYLF 113
Query: 298 HYLHSLA---SPSIIHSDVKSANILLDDNYTAKVSDF 331
L LA S ++H D+K N+L++ K++DF
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADF 150
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 65/166 (39%), Gaps = 24/166 (14%)
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF---ESLVPISSDDETA 344
+IA A+ +LHS S +IH DVK +N+L++ K+ DF LV + D A
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 345 MSTMIRGTVGYLDPEYAHTELLTGMNPNSYVALAS--NEKISMV-------PYFLDSIEN 395
G Y+ PE + EL N Y + + I+M+ PY
Sbjct: 171 ------GCKPYMAPERINPEL----NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF 220
Query: 396 NSFRQILNFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSE 441
+Q++ S+CL+ ERPT E+ +
Sbjct: 221 QQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 25/177 (14%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR-------ITEWEFLGIISQVKHKNVVKI 246
+G GG V++ VL + Q+ KY+ +E E +L + Q K ++++
Sbjct: 64 IGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK-IIRL 121
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSS----QVLKNWKTCLRIAAETASAIHYLHS 302
+ + +V E N L+ ++ K S + WK L A+H +H
Sbjct: 122 YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLE-------AVHTIHQ 173
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+HSD+K AN L+ D K+ DF + D + + GTV Y+ PE
Sbjct: 174 HG---IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPE 226
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 300 LHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+H++ I+HSD+K AN L+ D K+ DF + D + GTV Y+ PE
Sbjct: 140 VHTIHQHGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPE 198
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 250 CLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKT--CLRIAAETASAIHYLHSLASP 306
C +T L V E+V+ G L ++I Q + +K + AAE A + +L S
Sbjct: 89 CFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFLQSKG-- 141
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
II+ D+K N++LD K++DF D T + GT Y+ PE
Sbjct: 142 -IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPE 191
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 192 HCLGMGGFGSVYKGVLPDNTQ--VAVKKY--MCADEI---RITEWEFLGIISQVKHKNVV 244
H +G G +G VY NT+ VA+KK M D I RI + I++++K ++
Sbjct: 32 HLIGRGSYGYVYLAY-DKNTEKNVAIKKVNRMFEDLIDCKRILRE--ITILNRLKSDYII 88
Query: 245 KILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
++ L + + + L + S + K +KT + + E I Y L
Sbjct: 89 RLYDLIIPD-------DLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 305 S-----PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAM 345
IIH D+K AN LL+ + + KV DF I+S+ +T +
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNI 187
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 184 LKATKNFHHC--LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQ 237
L + +NF +G G +G VYK +V A+KK E + T + ++ +
Sbjct: 1 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 60
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
+ H N+VK+L + LV+EF+S L ++ D S+ T + + +
Sbjct: 61 LNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFM-DASAL------TGIPLPLIKSYLF 112
Query: 298 HYLHSLA---SPSIIHSDVKSANILLDDNYTAKVSDF 331
L LA S ++H D+K N+L++ K++DF
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 149
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 184 LKATKNFHHC--LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQ 237
L + +NF +G G +G VYK +V A+KK E + T + ++ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
+ H N+VK+L + LV+EF+S L ++ D S+ T + + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLSMD-LKDFM-DASAL------TGIPLPLIKSYLF 113
Query: 298 HYLHSLA---SPSIIHSDVKSANILLDDNYTAKVSDF 331
L LA S ++H D+K N+L++ K++DF
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 150
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 13/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-----AVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG GGF ++ D +V K + R + I + H++VV G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ +V E +L + + + LR + YLH +
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RV 160
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+ L+++ K+ DF + D E ++ GT Y+ PE
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPE 209
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF---ESLVPISSDDETA 344
++ A++YL +IH DVK +NILLD+ K+ DF LV + D +A
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 345 MSTMIRGTVGYLDPE 359
G Y+ PE
Sbjct: 186 ------GCAAYMAPE 194
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 13/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-----AVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG GGF ++ D +V K + R + I + H++VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ +V E +L + + + LR + YLH +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RV 138
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+ L+++ K+ DF + D E + + GT Y+ PE
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 187
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 13/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-----AVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG GGF ++ D +V K + R + I + H++VV G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ +V E +L + + + LR + YLH +
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RV 162
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+ L+++ K+ DF + D E ++ GT Y+ PE
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGER--KKVLCGTPNYIAPE 211
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 17/126 (13%)
Query: 244 VKILGLCLETKVTLLVYEFVSNGALS----HYIHDKSSQVLKNWKTCLRIAAETAS--AI 297
+++L C + F S+G +S H QVLK K RI E +I
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK---RIPEEILGKVSI 121
Query: 298 HYLHSLA----SPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTV 353
L LA I+H DVK +NIL++ K+ DF +S +M+ GT
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTR 177
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 178 SYMAPE 183
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 13/113 (11%)
Query: 250 CLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRI--AAETASAIHYLHSLASP 306
C +T L V E+V+ G L ++I Q + +K + AAE A + +L S
Sbjct: 410 CFQTMDRLYFVMEYVNGGDLMYHI-----QQVGRFKEPHAVFYAAEIAIGLFFLQSKG-- 462
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
II+ D+K N++LD K++DF D T + GT Y+ PE
Sbjct: 463 -IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPE 512
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 185 KATKNFHHC--LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFL------GII 235
+ T FH +G G FGSV+K V D A+K+ + E L ++
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 236 SQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC--LRIAAET 293
Q H +VV+ E L+ E+ + G+L+ I ++ +++ +K + +
Sbjct: 64 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQV 120
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILL 320
+ Y+HS+ S++H D+K +NI +
Sbjct: 121 GRGLRYIHSM---SLVHMDIKPSNIFI 144
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 13/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-----AVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG GGF ++ D +V K + R + I + H++VV G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ +V E +L + + + LR + YLH +
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RV 138
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+ L+++ K+ DF + D E + + GT Y+ PE
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 187
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 185 KATKNFHHC--LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFL------GII 235
+ T FH +G G FGSV+K V D A+K+ + E L ++
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 236 SQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC--LRIAAET 293
Q H +VV+ E L+ E+ + G+L+ I ++ +++ +K + +
Sbjct: 66 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQV 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILL 320
+ Y+HS+ S++H D+K +NI +
Sbjct: 123 GRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 66/198 (33%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF---------------------L 232
LG G FG V K C D RIT+ E+ +
Sbjct: 30 LGKGSFGEVLK---------------CKD--RITQQEYAVKVINKASAKNKDTSTILREV 72
Query: 233 GIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--------HDKSSQVLKNWK 284
++ ++ H N++K+ + ++ +V E + G L I HD +
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------- 124
Query: 285 TCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDD 341
RI + S I Y+H +I+H D+K NILL+ + K+ DF +
Sbjct: 125 ---RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFG--LSTCFQQ 176
Query: 342 ETAMSTMIRGTVGYLDPE 359
T M I GT Y+ PE
Sbjct: 177 NTKMKDRI-GTAYYIAPE 193
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 13/171 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-----AVKKYMCADEIRITEWEFLGIISQVKHKNVVKILG 248
LG GGF ++ D +V K + R + I + H++VV G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSI 308
+ +V E +L + + + LR + YLH +
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR---QIVLGCQYLHRN---RV 142
Query: 309 IHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
IH D+K N+ L+++ K+ DF + D E + + GT Y+ PE
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT--LCGTPNYIAPE 191
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 74/198 (37%), Gaps = 66/198 (33%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYMCADEIRITEWEF---------------------L 232
LG G FG V K C D RIT+ E+ +
Sbjct: 30 LGKGSFGEVLK---------------CKD--RITQQEYAVKVINKASAKNKDTSTILREV 72
Query: 233 GIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--------HDKSSQVLKNWK 284
++ ++ H N++K+ + ++ +V E + G L I HD +
Sbjct: 73 ELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAA-------- 124
Query: 285 TCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDD 341
RI + S I Y+H +I+H D+K NILL+ + K+ DF +
Sbjct: 125 ---RIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFG--LSTCFQQ 176
Query: 342 ETAMSTMIRGTVGYLDPE 359
T M I GT Y+ PE
Sbjct: 177 NTKMKDRI-GTAYYIAPE 193
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 14/123 (11%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVL------PDNTQVAVKKYMCADEIRITEWEFL 232
SK E + LG G FG V + P VAVK M + +E++ L
Sbjct: 20 SKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVK--MLKEGATASEYKAL 77
Query: 233 ----GIISQVKHK-NVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVLKNWKTC 286
I++ + H NVV +LG C + L+V E+ G LS+Y+ K N
Sbjct: 78 MTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRDLFFLNKDAA 137
Query: 287 LRI 289
L +
Sbjct: 138 LHM 140
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDF 331
L+S IH D+ + NILL +N K+ DF
Sbjct: 215 LSSRKCIHRDLAARNILLSENNVVKICDF 243
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 185 KATKNFHHC--LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFL------GII 235
+ T FH +G G FGSV+K V D A+K+ + E L ++
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 236 SQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC--LRIAAET 293
Q H +VV+ E L+ E+ + G+L+ I ++ +++ +K + +
Sbjct: 68 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQV 124
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILL 320
+ Y+HS+ S++H D+K +NI +
Sbjct: 125 GRGLRYIHSM---SLVHMDIKPSNIFI 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 67/147 (45%), Gaps = 17/147 (11%)
Query: 185 KATKNFHHC--LGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRITEWEFL------GII 235
+ T FH +G G FGSV+K V D A+K+ + E L ++
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 236 SQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTC--LRIAAET 293
Q H +VV+ E L+ E+ + G+L+ I ++ +++ +K + +
Sbjct: 66 GQ--HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAI-SENYRIMSYFKEAELKDLLLQV 122
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILL 320
+ Y+HS+ S++H D+K +NI +
Sbjct: 123 GRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 192 HCLGMGGFGSVYKGVLPD-NTQVAVKKY--MCADEI---RITEWEFLGIISQVKHKNVVK 245
H +G G +G VY + N VA+KK M D I RI + I++++K +++
Sbjct: 34 HLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILRE--ITILNRLKSDYIIR 91
Query: 246 ILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLAS 305
+ L + + + L + S + K +KT + + + I Y L
Sbjct: 92 LHDLIIPE-------DLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGE 144
Query: 306 -----PSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
IIH D+K AN LL+ + + K+ DF I+SD +
Sbjct: 145 KFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKD 186
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+S L ++ D S+ T + + + L LA S
Sbjct: 72 IHTENKLYLVFEFLSMD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADF 148
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D KV+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 229 WEFLGIISQVKHKNVVKILGLCLETKVTLL--VYEFVSNGALSHYIHDKS---SQVLKNW 283
++ + I+ ++ H NVVK++ + + L V+E V+ G + K Q +
Sbjct: 84 YQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYF 143
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDET 343
+ ++ I YLH IIH D+K +N+L+ ++ K++DF D
Sbjct: 144 QDLIK-------GIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDAL 193
Query: 344 AMSTMIRGTVGYLDPE 359
+T+ GT ++ PE
Sbjct: 194 LSNTV--GTPAFMAPE 207
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAA 291
++ Q+ H N++K+ + LV E + G L I + S+V RI
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIR 139
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTM 348
+ S I Y+H I+H D+K N+LL+ + ++ DF +S+ E +
Sbjct: 140 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDF----GLSTHFEASKKMK 192
Query: 349 IR-GTVGYLDPEYAH 362
+ GT Y+ PE H
Sbjct: 193 DKIGTAYYIAPEVLH 207
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D KV+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D KV+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D KV+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIKVADFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 184 LKATKNFHHC--LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQ 237
L + +NF +G G +G VYK +V A+KK E + T + ++ +
Sbjct: 2 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 61
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
+ H N+VK+L + LV+EF+ L ++ D S+ T + + +
Sbjct: 62 LNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLF 113
Query: 298 HYLHSLA---SPSIIHSDVKSANILLDDNYTAKVSDF 331
L LA S ++H D+K N+L++ K++DF
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 150
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 17/157 (10%)
Query: 184 LKATKNFHHC--LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQ 237
L + +NF +G G +G VYK +V A+KK E + T + ++ +
Sbjct: 3 LGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKE 62
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
+ H N+VK+L + LV+EF+ L ++ D S+ T + + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLF 114
Query: 298 HYLHSLA---SPSIIHSDVKSANILLDDNYTAKVSDF 331
L LA S ++H D+K N+L++ K++DF
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADF 151
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 194 LGMGGFGSV-YKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
LG G G+V ++G VAVK+ M D I E + H NV++ C E
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKR-MLIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 96
Query: 253 TKVTLLVYEF-VSNGALSHYIHDK--SSQVLKNWK--TCLRIAAETASAIHYLHSLASPS 307
T L + N L + K S + LK K + + + AS + +LHSL
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---K 153
Query: 308 IIHSDVKSANILL 320
IIH D+K NIL+
Sbjct: 154 IIHRDLKPQNILV 166
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 9/135 (6%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKS-SQVLKNWKTCLRIAAE 292
I +KH ++V++L + +V+EF+ L I ++ + + + +
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 293 TASAIHYLHSLASPSIIHSDVKSANILL---DDNYTAKVSDFESLVPISSDDETAMSTMI 349
A+ Y H +IIH DVK N+LL +++ K+ DF + + A +
Sbjct: 139 ILEALRYCHD---NNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV- 194
Query: 350 RGTVGYLDPEYAHTE 364
GT ++ PE E
Sbjct: 195 -GTPHFMAPEVVKRE 208
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 XGTPEYLAPE 208
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAA 291
++ Q+ H N++K+ + LV E + G L I + S+V RI
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIR 133
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTM 348
+ S I Y+H I+H D+K N+LL+ + ++ DF +S+ E +
Sbjct: 134 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDF----GLSTHFEASKKMK 186
Query: 349 IR-GTVGYLDPEYAH 362
+ GT Y+ PE H
Sbjct: 187 DKIGTAYYIAPEVLH 201
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 194 LGMGGFGSV-YKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
LG G G+V ++G VAVK+ M D I E + H NV++ C E
Sbjct: 41 LGYGSSGTVVFQGSF-QGRPVAVKR-MLIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 96
Query: 253 TKVTLLVYEF-VSNGALSHYIHDK--SSQVLKNWK--TCLRIAAETASAIHYLHSLASPS 307
T L + N L + K S + LK K + + + AS + +LHSL
Sbjct: 97 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---K 153
Query: 308 IIHSDVKSANILL 320
IIH D+K NIL+
Sbjct: 154 IIHRDLKPQNILV 166
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAA 291
++ Q+ H N++K+ + LV E + G L I + S+V RI
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIR 157
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTM 348
+ S I Y+H I+H D+K N+LL+ + ++ DF +S+ E +
Sbjct: 158 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDF----GLSTHFEASKKMK 210
Query: 349 IR-GTVGYLDPEYAH 362
+ GT Y+ PE H
Sbjct: 211 DKIGTAYYIAPEVLH 225
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D+ +V+DF + + +
Sbjct: 134 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK-----GRTWXL 185
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 186 CGTPEYLAPE 195
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAA 291
++ Q+ H N++K+ + LV E + G L I + S+V RI
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIR 156
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTM 348
+ S I Y+H I+H D+K N+LL+ + ++ DF +S+ E +
Sbjct: 157 QVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDF----GLSTHFEASKKMK 209
Query: 349 IR-GTVGYLDPEYAH 362
+ GT Y+ PE H
Sbjct: 210 DKIGTAYYIAPEVLH 224
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 68/155 (43%), Gaps = 32/155 (20%)
Query: 194 LGMGGFGSV---YKGVLPDNTQVAVKK----YMCADEIRITEWEFLGIISQVKHKNVVKI 246
+G G +GSV Y L +VAVKK + R T E L ++ +KH+NV+ +
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 92
Query: 247 LGLCLETK----------VTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
L + VT L+ ++N S + D+ Q L +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFL---------VYQLLRG 143
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ Y+HS IIH D+K +N+ ++++ ++ DF
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDF 175
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 74
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 75 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADF 151
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 78 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADF 154
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 AGTPEYLAPE 208
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 194 LGMGGFGSV-YKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
LG G G+V ++G VAVK+ M D I E + H NV++ C E
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKR-MLIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 78
Query: 253 TKVTLLVYEF-VSNGALSHYIHDK--SSQVLKNWK--TCLRIAAETASAIHYLHSLASPS 307
T L + N L + K S + LK K + + + AS + +LHSL
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---K 135
Query: 308 IIHSDVKSANILL 320
IIH D+K NIL+
Sbjct: 136 IIHRDLKPQNILV 148
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 70 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADF 146
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 17/146 (11%)
Query: 194 LGMGGFGSVYK------GVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKIL 247
LG G FG V+K G+ + + +E++ + +++Q+ H N++++
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVK----NEISVMNQLDHANLIQLY 152
Query: 248 GLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
+LV E+V G L I D+S L T L + I ++H +
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYN-LTELDTIL-FMKQICEGIRHMHQMY--- 207
Query: 308 IIHSDVKSANILL--DDNYTAKVSDF 331
I+H D+K NIL D K+ DF
Sbjct: 208 ILHLDLKPENILCVNRDAKQIKIIDF 233
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 283 WKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDE 342
WK L A+H +H I+HSD+K AN L+ D K+ DF + D
Sbjct: 161 WKNMLE-------AVHTIHQHG---IVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDTT 209
Query: 343 TAMSTMIRGTVGYLDPE 359
+ + G V Y+ PE
Sbjct: 210 SVVKDSQVGAVNYMPPE 226
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 59/133 (44%), Gaps = 13/133 (9%)
Query: 194 LGMGGFGSV-YKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKILGLCLE 252
LG G G+V ++G VAVK+ M D I E + H NV++ C E
Sbjct: 23 LGYGSSGTVVFQGSF-QGRPVAVKR-MLIDFCDIALMEIKLLTESDDHPNVIRYY--CSE 78
Query: 253 TKVTLLVYEF-VSNGALSHYIHDK--SSQVLKNWK--TCLRIAAETASAIHYLHSLASPS 307
T L + N L + K S + LK K + + + AS + +LHSL
Sbjct: 79 TTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---K 135
Query: 308 IIHSDVKSANILL 320
IIH D+K NIL+
Sbjct: 136 IIHRDLKPQNILV 148
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 70 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADF 146
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 70 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADF 146
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ D + + + T + + + L LA S
Sbjct: 74 IHTENKLYLVFEFLHQ--------DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADF 150
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D KV+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D KV+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D KV+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 77
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 78 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADF 154
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D KV+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 72 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADF 148
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 73 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADF 149
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 72 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADF 148
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D KV+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D KV+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKDFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADF 147
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 73 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADF 149
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 70 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADF 146
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + A T+
Sbjct: 168 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG----FAKRVKGATWTLC 220
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 221 -GTPEYLAPE 229
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 72
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 73 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADF 149
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 72 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADF 148
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 74 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADF 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 71
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 72 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADF 148
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + T +
Sbjct: 133 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----L 184
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 185 CGTPEYLAPE 194
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + T +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWT-----L 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 60/159 (37%), Gaps = 10/159 (6%)
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMST 347
+IA A+ +LHS S +IH DVK +N+L++ K DF + DD
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDF-GISGYLVDD--VAKD 194
Query: 348 MIRGTVGYLDPEYAHTEL-LTGMNPNSYVALASNEKISMV----PYFLDSIENNSFRQIL 402
+ G Y PE + EL G + S + I + PY +Q++
Sbjct: 195 IDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVV 254
Query: 403 NFQXXXXXXXXXXXXXXXXXSKCLRIRGTERPTMKEVSE 441
S+CL+ ERPT E+ +
Sbjct: 255 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQ 293
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/142 (19%), Positives = 69/142 (48%), Gaps = 10/142 (7%)
Query: 194 LGMGGFGSVYKGVLPDNTQVAVKKYM---CADEIRITEWEFLGIISQVKHKNVVKILGLC 250
LG G FG V++ V + + + K++ D++ + + + I++ +H+N++ +
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKE--ISILNIARHRNILHLHESF 70
Query: 251 LETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIH 310
+ ++++EF+S + I+ + ++ N + + + A+ +LH S +I H
Sbjct: 71 ESMEELVMIFEFISGLDIFERINTSAFEL--NEREIVSYVHQVCEALQFLH---SHNIGH 125
Query: 311 SDVKSANILLDDNYTAKVSDFE 332
D++ NI+ ++ + E
Sbjct: 126 FDIRPENIIYQTRRSSTIKIIE 147
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D KV+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 142 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 193
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 194 CGTPEYLAPE 203
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 148 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 199
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 200 CGTPEYLAPE 209
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 168 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 219
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 220 CGTPEYLAPE 229
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 140 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 191
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 192 CGTPEYLAPE 201
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 168 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 219
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 220 CGTPEYLAPE 229
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+L+D +V+DF + + +
Sbjct: 140 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK-----GRTWXL 191
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 192 CGTPEYLAPE 201
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSII 309
LV+EF+ L ++ D S+ + + + HS ++
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASALTGIPLPLIKSYLFQLLQGLSFCHSH---RVL 125
Query: 310 HSDVKSANILLDDNYTAKVSDF 331
H D+K N+L++ K++DF
Sbjct: 126 HRDLKPQNLLINTEGAIKLADF 147
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 9/80 (11%)
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDDN--YTAKVSDF---ESLVPISSDDET 343
I + SA+HYLH+ I H D+K N L N + K+ DF + +++ +
Sbjct: 173 IMRQIFSALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYY 229
Query: 344 AMSTMIRGTVGYLDPEYAHT 363
M+T GT ++ PE +T
Sbjct: 230 GMTTKA-GTPYFVAPEVLNT 248
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + QV++ R++
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
+ ++ Q+ H N++K+ + + LV E G L I K S+V I
Sbjct: 55 VAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-----DAAVI 109
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMS 346
+ S YLH +I+H D+K N+LL+ + K+ DF +S+ E
Sbjct: 110 MKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDF----GLSAHFEVGGK 162
Query: 347 TMIR-GTVGYLDPE 359
R GT Y+ PE
Sbjct: 163 MKERLGTAYYIAPE 176
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 147
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDF 174
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 189 NFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEI-RITEWEFLGIISQVKHKNVVKI 246
+ H LG G FG V++ A K M E + T + + +S ++H +V +
Sbjct: 54 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 113
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+ +++YEF+S G L + D+ +++ ++ + + + ++H
Sbjct: 114 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN--- 168
Query: 307 SIIHSDVKSANILL 320
+ +H D+K NI+
Sbjct: 169 NYVHLDLKPENIMF 182
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V + +VA+KK C +R + I+ + +H+N+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLRE-----IKILLRFRHENI 83
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + ++ + ++ +Q L N C + + Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIHS 142
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
+++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 143 A---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V + +VA+KK C +R + I+ + +H+N+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLRE-----IKILLRFRHENI 83
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + ++ + ++ +Q L N C + + Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICY-FLYQILRGLKYIHS 142
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
+++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 143 A---NVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 32.3 bits (72), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 132
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 133 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRI 289
+ ++ Q+ H N++K+ + + LV E G L I K S+V I
Sbjct: 72 VAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-----DAAVI 126
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMS 346
+ S YLH +I+H D+K N+LL+ + K+ DF +S+ E
Sbjct: 127 MKQVLSGTTYLHK---HNIVHRDLKPENLLLESKSRDALIKIVDF----GLSAHFEVGGK 179
Query: 347 TMIR-GTVGYLDPE 359
R GT Y+ PE
Sbjct: 180 MKERLGTAYYIAPE 193
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
S IIH D+K +N+ ++++ K+ DF + +DDE A
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMA 180
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 192
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
S IIH D+K +N+ ++++ K+ DF + +DDE A
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMA 180
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 23/178 (12%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V + +VA+KK C +R + I+ + +H+N+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLRE-----IKILLRFRHENI 83
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + ++ + ++ +Q L N C + + + Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHS 142
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
+++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 143 A---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV + ++AVKK + I + L ++ +KH+NV+ +L +
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
T T L EF ++H + + ++K C ++ + + Y L +
Sbjct: 119 F--TPATSLE-EFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 171
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 172 SADIIHRDLKPSNLAVNEDCELKILDF 198
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYIHDKSSQVLKNWKT 285
L ++ V HKN++ +L + K LV E + + L IH + ++
Sbjct: 74 LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-- 130
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 131 ---LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVIQMELDHERMSYLL 132
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 133 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 20 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 79
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 80 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 131
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 262 FVSNGALSHYIHDKSSQVL-KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILL 320
FV +LS +++ + L K++ T + + + LAS IH D+ + NILL
Sbjct: 172 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 231
Query: 321 DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ K+ DF I D + R + ++ PE
Sbjct: 232 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 270
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 147
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDF 174
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 22 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 81
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 82 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 133
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 262 FVSNGALSHYIHDKSSQVL-KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILL 320
FV +LS +++ + L K++ T + + + LAS IH D+ + NILL
Sbjct: 174 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 233
Query: 321 DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ K+ DF I D + R + ++ PE
Sbjct: 234 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 272
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 32/155 (20%)
Query: 194 LGMGGFGSV---YKGVLPDNTQVAVKK----YMCADEIRITEWEFLGIISQVKHKNVVKI 246
+G G +GSV Y L +VAVKK + R T E L ++ +KH+NV+ +
Sbjct: 28 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 84
Query: 247 LGLCLETK----------VTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
L + VT L+ ++N + D+ Q L +
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFL---------VYQLLRG 135
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ Y+HS IIH D+K +N+ ++++ ++ DF
Sbjct: 136 LKYIHSAG---IIHRDLKPSNVAVNEDCELRILDF 167
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 153 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 200
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 101 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 153
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDF 180
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYIHDKSSQVLKNWKT 285
L ++ V HKN++ +L + K LV E + + L IH + ++
Sbjct: 72 LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHERMSY-- 128
Query: 286 CLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 129 ---LLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 168
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.0 bits (71), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 74
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 75 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 126
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 262 FVSNGALSHYIHDKSSQVL-KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILL 320
FV +LS +++ + L K++ T + + + LAS IH D+ + NILL
Sbjct: 167 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 226
Query: 321 DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ K+ DF I D + R + ++ PE
Sbjct: 227 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 265
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 189 NFHHCLGMGGFGSVYKGV-LPDNTQVAVKKYMCADEI-RITEWEFLGIISQVKHKNVVKI 246
+ H LG G FG V++ A K M E + T + + +S ++H +V +
Sbjct: 160 DIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNL 219
Query: 247 LGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
+ +++YEF+S G L + D+ +++ ++ + + + ++H
Sbjct: 220 HDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED--EAVEYMRQVCKGLCHMHEN--- 274
Query: 307 SIIHSDVKSANILL 320
+ +H D+K NI+
Sbjct: 275 NYVHLDLKPENIMF 288
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 18/160 (11%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 86 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 138
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETA 344
S IIH D+K +N+ ++++ K+ DF + +DDE A
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFG--LARHTDDEMA 176
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMI 349
AA+ YLHSL +I+ D+K N+++D +V+DF + + +
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK-----GRTWXL 198
Query: 350 RGTVGYLDPE 359
GT YL PE
Sbjct: 199 CGTPEYLAPE 208
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
AA+ YLHSL +I+ D+K N+L+D +V+DF
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+E H D + + + T + + + L LA S
Sbjct: 70 IHTENKLYLVFE--------HVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADF 146
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 10/112 (8%)
Query: 179 SKSELLKATKNFHHCLGMGGFGSVYKGVLPDNTQVAVKKYMCADEIR--ITEWEFLGIIS 236
SK E + LG G FG V + + A + + ++ T E ++S
Sbjct: 13 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMS 72
Query: 237 QVK-------HKNVVKILGLCLETKVTLLV-YEFVSNGALSHYIHDKSSQVL 280
++K H NVV +LG C + L+V EF G LS Y+ K ++ +
Sbjct: 73 ELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFV 124
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 1/99 (1%)
Query: 262 FVSNGALSHYIHDKSSQVL-KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILL 320
FV +LS +++ + L K++ T + + + LAS IH D+ + NILL
Sbjct: 165 FVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 224
Query: 321 DDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
+ K+ DF I D + R + ++ PE
Sbjct: 225 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE 263
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 290 AAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
AA+ YLHSL +I+ D+K N+L+D +V+DF
Sbjct: 147 AAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDF 185
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 188 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 235
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 23/178 (12%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V + +VA+KK C +R + I+ + +H+N+
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLRE-----IKILLRFRHENI 83
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + ++ + ++ +Q L N C + + + Y+HS
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHS 142
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
+++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 143 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 197
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 32/155 (20%)
Query: 194 LGMGGFGSV---YKGVLPDNTQVAVKK----YMCADEIRITEWEFLGIISQVKHKNVVKI 246
+G G +GSV Y L +VAVKK + R T E L ++ +KH+NV+ +
Sbjct: 36 VGSGAYGSVCSAYDARL--RQKVAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 92
Query: 247 LGLCLETK----------VTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASA 296
L + VT L+ ++N + D+ Q L +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFL---------VYQLLRG 143
Query: 297 IHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ Y+HS IIH D+K +N+ ++++ ++ DF
Sbjct: 144 LKYIHSAG---IIHRDLKPSNVAVNEDSELRILDF 175
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + SQV++ R++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 234 IISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAA 291
++ Q+ H N+ K+ + LV E + G L I + S+V RI
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEV-----DAARIIR 133
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAMSTM 348
+ S I Y H I+H D+K N+LL+ + ++ DF +S+ E +
Sbjct: 134 QVLSGITYXHK---NKIVHRDLKPENLLLESKSKDANIRIIDF----GLSTHFEASKKXK 186
Query: 349 IR-GTVGYLDPEYAH 362
+ GT Y+ PE H
Sbjct: 187 DKIGTAYYIAPEVLH 201
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + QV++ R++
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 170
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + SQV++ R++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKYMCADEIRITEWEF--LGIISQVKHKNVVKILG 248
+G G +G S Y V + +VA+KK + + + I+ + +H+N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 90
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
+ + + ++ + ++ +Q L N C + + + Y+HS +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSA---N 146
Query: 308 IIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 144
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDF 171
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + QV++ R++
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKT---LEEFQDVYLVMELMDANLXQVIQMELDHERMSY 123
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 124 LLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDF 163
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + SQV++ R++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKT----CLRIAAETASAIHYLHSLAS 305
+ + EF ++H + + ++K K + + + Y+HS
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
IIH D+K +N+ ++++ K+ DF
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDF 169
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 147
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDF 174
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 89 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 141
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDF 168
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 31/180 (17%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKYMCADEIRITEWEF--LGIISQVKHKNVVKILG 248
+G G +G S Y V + +VA+KK + + + I+ + +H+N++ I
Sbjct: 39 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 96
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
+ + + ++ + ++ +Q L N C + + + Y+HS +
Sbjct: 97 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSA---N 152
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLT 367
++H D+K +N+LL+ K+ DF G DP++ HT LT
Sbjct: 153 VLHRDLKPSNLLLNTTCDLKICDF-------------------GLARVADPDHDHTGFLT 193
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 37/180 (20%), Positives = 74/180 (41%), Gaps = 31/180 (17%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKYMCADEIRITEWEF--LGIISQVKHKNVVKILG 248
+G G +G S Y V + +VA+KK + + + I+ + +H+N++ I
Sbjct: 31 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGIND 88
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
+ + + ++ + ++ +Q L N C + + + Y+HS +
Sbjct: 89 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSA---N 144
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLT 367
++H D+K +N+LL+ K+ DF G DP++ HT LT
Sbjct: 145 VLHRDLKPSNLLLNTTCDLKICDF-------------------GLARVADPDHDHTGFLT 185
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S +M+ GT Y+ PE
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDSMANSFVGTRSYMSPE 173
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 14/146 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKT----CLRIAAETASAIHYLHSLAS 305
+ + EF ++H + + ++K+ K + + + Y+HS
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
IIH D+K +N+ ++++ K+ DF
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDF 169
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 102 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 154
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDF 181
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 144
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDF 171
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 149
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDF 176
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 23/178 (12%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V + +VA+KK C +R + I+ + +H+N+
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIK-----ILLRFRHENI 103
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + ++ + ++ +Q L N C + + + Y+HS
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHS 162
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
+++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 163 A---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 102 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 154
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDF 181
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 102 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 154
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDF 181
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 144
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDF 171
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 96 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 148
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDF 175
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 113 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 165
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDF 192
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 149
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDF 176
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+KK E + T + ++ ++ H N+VK+L +
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 73
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+E V L ++ D S+ T + + + L LA S
Sbjct: 74 IHTENKLYLVFEHVDQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADF 150
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + SQV++ R++
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 149
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDF 176
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 96 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 148
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDF 175
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 31.6 bits (70), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 101 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 153
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDF 180
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 14/144 (9%)
Query: 191 HHCLGMGGFGSVYKGVLPD-NTQVAVKKYMCADEIRITEWEFLGIISQVKHK-------N 242
HH LG G F VY+ D N +K++ + WEF I +Q+ +
Sbjct: 70 HHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFY-IGTQLMERLKPSMQHM 128
Query: 243 VVKILGLCLETKVTLLVYEFVSNGALSHYI--HDKSSQVLKNWKTCLRIAAETASAIHYL 300
+K L ++LV E S G L + I + + + + + A I +
Sbjct: 129 FMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQV 188
Query: 301 HSLASPSIIHSDVKSANILLDDNY 324
H IIH D+K N +L + +
Sbjct: 189 HDC---EIIHGDIKPDNFILGNGF 209
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 97 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 149
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDF 176
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 113 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 165
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDF 192
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + SQV++ R++
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 92 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 144
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDF 171
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)
Query: 232 LGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAA 291
L ++ V HKN++ +L + K + EF + + SQV++ R++
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKS---LEEFQDVYIVMELMDANLSQVIQMELDHERMSY 130
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + L S IIH D+K +NI++ + T K+ DF
Sbjct: 131 LLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|2W1Z|A Chain A, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity.
pdb|2W1Z|B Chain B, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity
Length = 368
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 38/84 (45%), Gaps = 10/84 (11%)
Query: 268 LSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAK 327
LSH KS + L++ AS HY ++H+D + NILLD
Sbjct: 179 LSHSSTHKSLVHHARLQLTLQLIRLAASLQHY-------GLVHADFQVRNILLDQRGGVF 231
Query: 328 VSDFESLVPISSDDETAMSTMIRG 351
++ FE LV D +A+S + RG
Sbjct: 232 LTGFEHLV---RDGASAVSPIGRG 252
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 132
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 133 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 125
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 126 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 163
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 31.6 bits (70), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 126
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 127 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 164
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 126
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 127 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 164
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 109 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 161
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDF 188
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 253 TKVTLLVYEFVSNGAL-SHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHS 311
T +L+ E+ + G + S + + + V +N +R+ + ++YLH +I+H
Sbjct: 101 TSEIILILEYAAGGEIFSLCLPELAEMVSEN--DVIRLIKQILEGVYYLHQ---NNIVHL 155
Query: 312 DVKSANILLDDNYT---AKVSDFESLVPISSDDETAMSTMIRGTVGYLDPEYAHTELLT 367
D+K NILL Y K+ DF I E I GT YL PE + + +T
Sbjct: 156 DLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACEL---REIMGTPEYLAPEILNYDPIT 211
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 110 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 162
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDF 189
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 133
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 134 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 171
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 95 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 147
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDF 174
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 132
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 133 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|1MO9|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MO9|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE Complexed With 2-Ketopropyl
Coenzyme M
pdb|1MOK|A Chain A, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|B Chain B, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|C Chain C, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|1MOK|D Chain D, Nadph Dependent 2-Ketopropyl Coenzyme M
OxidoreductaseCARBOXYLASE
pdb|2C3D|A Chain A, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3D|B Chain B, 2.15 Angstrom Crystal Structure Of 2-Ketopropyl Coenzyme M
Oxidoreductase Carboxylase With A Coenzyme M Disulfide
Bound At The Active Site
pdb|2C3C|A Chain A, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|2C3C|B Chain B, 2.01 Angstrom X-Ray Crystal Structure Of A Mixed Disulfide
Between Coenzyme M And Nadph-Dependent Oxidoreductase 2-
Ketopropyl Coenzyme M Carboxylase
pdb|3Q6J|A Chain A, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
pdb|3Q6J|B Chain B, Structural Basis For Carbon Dioxide Binding By
2-Ketopropyl Coenzyme M OxidoreductaseCARBOXYLASE
Length = 523
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 223 EIRI-TEWEFLGIISQVKHKNVVKILGLCLETKVTLLVYEFV 263
E+RI T++ FLG+ Q + + KILGL L K +LV E++
Sbjct: 300 EMRIETDFVFLGLGEQPRSAELAKILGLDLGPKGEVLVNEYL 341
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+ K E + T + ++ ++ H N+VK+L +
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 70
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 71 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADF 147
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 194 LGMGGFGSVYKGVLPDNTQV-AVKKYMCADE---IRITEWEFLGIISQVKHKNVVKILGL 249
+G G +G VYK +V A+ K E + T + ++ ++ H N+VK+L +
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDV 69
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA---SP 306
LV+EF+ L ++ D S+ T + + + L LA S
Sbjct: 70 IHTENKLYLVFEFLHQD-LKKFM-DASAL------TGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 307 SIIHSDVKSANILLDDNYTAKVSDF 331
++H D+K N+L++ K++DF
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADF 146
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 288 RIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+I T A+++L + IIH D+K +NILLD + K+ DF
Sbjct: 129 KITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCDF 170
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 131
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 132 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 169
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 133
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 134 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 171
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 87 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 139
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDF 166
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 87 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 139
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDF 166
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 23/178 (12%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V + +VA+KK C +R + I+ + +H+N+
Sbjct: 51 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIK-----ILLRFRHENI 103
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + ++ + ++ +Q L N C + + + Y+HS
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFLY-QILRGLKYIHS 162
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
+++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 163 A---NVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 217
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 100 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 152
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDF 179
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 86 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 138
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDF 165
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 96 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 148
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDF 175
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 41/161 (25%)
Query: 197 GGFGSVYKGVLPDNTQVAVKK-----------------YMCADEIRITEWEFLGIISQVK 239
G +G+V GV + VA+K+ ++C +R + +++
Sbjct: 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE-----IRLLNHFH 87
Query: 240 HKNVVKILGLCLETKVT-----LLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIA 290
H N++ + + + + LV E + L+ IHD+ S Q ++ + + +
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQRIVISPQHIQYFMYHILLG 146
Query: 291 AETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
LH L ++H D+ NILL DN + DF
Sbjct: 147 ---------LHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 88 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 140
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDF 167
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 31.2 bits (69), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 16/131 (12%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
++H N+V+ + L ++ E+ S G L I + + + + S +
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ---QLLSGV 129
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTA--KVSDFESLVPISSDDETAMSTMIRGTVGY 355
Y HS+ I H D+K N LLD + K+ DF + + + + TVG
Sbjct: 130 SYCHSM---QICHRDLKLENTLLDGSPAPRLKICDF------GYSKSSVLHSQPKSTVG- 179
Query: 356 LDPEYAHTELL 366
P Y E+L
Sbjct: 180 -TPAYIAPEVL 189
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 122 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 110 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 162
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDF 189
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 66/146 (45%), Gaps = 14/146 (9%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKT----CLRIAAETASAIHYLHSLAS 305
+ + EF ++H + + ++K K + + + Y+HS
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS--- 143
Query: 306 PSIIHSDVKSANILLDDNYTAKVSDF 331
IIH D+K +N+ ++++ K+ DF
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDF 169
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 86 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CAKLTDDHVQFLIYQILRGLKYIH 138
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDF 165
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 170
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 171 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 208
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 41/161 (25%)
Query: 197 GGFGSVYKGVLPDNTQVAVKK-----------------YMCADEIRITEWEFLGIISQVK 239
G +G+V GV + VA+K+ ++C +R + +++
Sbjct: 33 GSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE-----IRLLNHFH 87
Query: 240 HKNVVKILGLCLETKVT-----LLVYEFVSNGALSHYIHDK----SSQVLKNWKTCLRIA 290
H N++ + + + + LV E + L+ IHD+ S Q ++ + + +
Sbjct: 88 HPNILGLRDIFVHFEEPAMHKLYLVTELMRTD-LAQVIHDQRIVISPQHIQYFMYHILLG 146
Query: 291 AETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
LH L ++H D+ NILL DN + DF
Sbjct: 147 ---------LHVLHEAGVVHRDLHPGNILLADNNDITICDF 178
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 122 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKICDFGLARV 177
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 110 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 162
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDF 189
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 25/111 (22%)
Query: 232 LGIISQVKHKNVVKILGLCLETKV------TLLVYEFVSNGALSHYI-----HDKSSQVL 280
L ++ V HKN++ +L + K LV E + + L I H++ S +L
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIQMELDHERMSYLL 170
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 171 ----------YQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 208
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 109 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 161
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDF 188
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 68/148 (45%), Gaps = 18/148 (12%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKK----YMCADEIRITEWEFLGIISQVKHKNVVKILG 248
+G G +GSV +VAVKK + + T E L ++ +KH+NV+ +L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSL 303
+ + + EF ++H + + ++K C ++ + + Y L +
Sbjct: 95 VFTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYI 147
Query: 304 ASPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDF 175
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 86 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 138
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ DF
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDF 165
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 122 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
Query: 308 IIHSDVKSANILLDDNYTAKVSDFESLVPISSDDETAMSTMIRGTVGYLDPE 359
I+H DVK +NIL++ K+ DF +S M+ GT Y+ PE
Sbjct: 129 IMHRDVKPSNILVNSRGEIKLCDFG----VSGQLIDEMANEFVGTRSYMSPE 176
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 116 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 26/127 (20%)
Query: 235 ISQVKHKNVVKILGLCLETKV-TLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAET 293
I Q+K +V+ L +ET + LL + +SN + ++++ Q+L+ K
Sbjct: 99 IEQMKDVYIVQDL---METDLYKLLKCQHLSNDHICYFLY----QILRGLK--------- 142
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGT 352
Y+HS +++H D+K +N+LL+ K+ DF + V D T T T
Sbjct: 143 -----YIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT 194
Query: 353 VGYLDPE 359
Y PE
Sbjct: 195 RWYRAPE 201
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 123 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 178
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPE 202
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 124 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 179
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPE 203
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 115 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 170
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPE 194
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 122 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPE 201
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 277 SQVLKNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFE-SLV 335
+Q L N C + + + Y+HS +++H D+K +N+LL+ K+ DF + V
Sbjct: 116 TQHLSNDHICYFLY-QILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 171
Query: 336 PISSDDETAMSTMIRGTVGYLDPE 359
D T T T Y PE
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPE 195
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 292 ETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAK 327
E A++YL + S+ H+D+K NILLDD Y K
Sbjct: 145 EILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 14/134 (10%)
Query: 230 EFLGIISQVKHKNVVKILGLCLETKVTLLVYEFVSNGAL-SHYIHDKSSQVLKNWKTCLR 288
E + ++ + H N++K+ + + LV E G L IH ++ N
Sbjct: 85 EEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIH----RMKFNEVDAAV 140
Query: 289 IAAETASAIHYLHSLASPSIIHSDVKSANILLDD---NYTAKVSDFESLVPISSDDETAM 345
I + S + YLH +I+H D+K N+LL+ + K+ DF L + + +
Sbjct: 141 IIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDF-GLSAVFENQKKMK 196
Query: 346 STMIRGTVGYLDPE 359
+ GT Y+ PE
Sbjct: 197 ERL--GTAYYIAPE 208
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.8 bits (68), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 63/148 (42%), Gaps = 10/148 (6%)
Query: 194 LGMGGFGSV--YKGVLPDNTQVAVKKYMCADEIRITEWEFLGIISQV-KHKNVVKILGLC 250
LG GGF V +G L D A+K+ +C ++ E + + ++ H N+++++ C
Sbjct: 37 LGEGGFSYVDLVEG-LHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 251 LETKVT----LLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
L + L+ F G L + I + N+ T +I L ++ +
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHAK 153
Query: 307 SIIHSDVKSANILLDDNYTAKVSDFESL 334
H D+K NILL D + D S+
Sbjct: 154 GYAHRDLKPTNILLGDEGQPVLMDLGSM 181
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 13/173 (7%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKYMCADEIRITEWEF--LGIISQVKHKNVVKILG 248
+G G +G S Y V + +VA+KK + + + I+ +H+N++ I
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGIND 90
Query: 249 LCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHSLASPS 307
+ + + ++ + ++ +Q L N C + + + Y+HS +
Sbjct: 91 IIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHSA---N 146
Query: 308 IIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 147 VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 23/178 (12%)
Query: 194 LGMGGFG---SVYKGVLPDNTQVAVKKY-------MCADEIRITEWEFLGIISQVKHKNV 243
+G G +G S Y V + +VA+KK C +R + I+ +H+N+
Sbjct: 33 IGEGAYGMVCSAYDNV--NKVRVAIKKISPFEHQTYCQRTLREIK-----ILLAFRHENI 85
Query: 244 VKILGLCLETKVTLLVYEFVSNGALSHYIHDK-SSQVLKNWKTCLRIAAETASAIHYLHS 302
+ I + + + ++ + ++ +Q L N C + + + Y+HS
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLY-QILRGLKYIHS 144
Query: 303 LASPSIIHSDVKSANILLDDNYTAKVSDFE-SLVPISSDDETAMSTMIRGTVGYLDPE 359
+++H D+K +N+LL+ K+ DF + V D T T T Y PE
Sbjct: 145 A---NVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPE 199
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 172
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 194 LGMGGFGSVYKGV-LPDNTQV------AVKKYMCADEIRITEWEFLGIISQVKHKNVVKI 246
LG G + V++ + + +N +V VKK EI+I E G N++ +
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGG-------PNIITL 97
Query: 247 LGLCLE--TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLA 304
+ + ++ LV+E V+N + Q L ++ + E A+ Y HS+
Sbjct: 98 ADIVKDPVSRTPALVFEHVNNTDFK-----QLYQTLTDYDIRFYMY-EILKALDYCHSMG 151
Query: 305 SPSIIHSDVKSANILLD 321
I+H DVK N+++D
Sbjct: 152 ---IMHRDVKPHNVMID 165
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 67/147 (45%), Gaps = 16/147 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSDF 331
S IIH D+K +N+ ++++ K+ D+
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDY 169
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 175
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
++H N+V+ + L +V E+ S G L I + + + + S +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTA--KVSDF--ESLVPISSDDETAMSTMIRGTV 353
Y H++ + H D+K N LLD + K++DF + S ++A+ GT
Sbjct: 129 SYAHAM---QVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAV-----GTP 180
Query: 354 GYLDPE 359
Y+ PE
Sbjct: 181 AYIAPE 186
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 171
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/171 (19%), Positives = 71/171 (41%), Gaps = 18/171 (10%)
Query: 171 AFSRMKIFSKSELLKATKNFHHCLGMGGFGSVYKGVLP-DNTQVAVKKYMCADEIRI--- 226
F R ++ + ++A +G G +G+V V +VA+KK + +
Sbjct: 10 GFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAK 69
Query: 227 TEWEFLGIISQVKHKNVVKILGLCLETKVT------LLVYEFVSNGALSHYIHDKSSQVL 280
+ L ++ ++H+NV+ +L + + LV F+ H+K +
Sbjct: 70 RAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 129
Query: 281 KNWKTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
+ + + + Y+H+ IIH D+K N+ ++++ K+ DF
Sbjct: 130 IQF-----LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDF 172
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 3/36 (8%)
Query: 296 AIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 170
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 295 SAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDF 331
I +LHS IIH D+K +NI++ + T K+ DF
Sbjct: 131 CGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDF 164
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 65/148 (43%), Gaps = 10/148 (6%)
Query: 195 GMGGFGSVYKGVLPD-NTQVAVKKYMCADEIRITEWEFLGIISQVKHKNVVKI------L 247
G G FG+V G VA+KK + R E + + ++ + H N+V++ L
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTL 91
Query: 248 GLCLETKVTL-LVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHYLHSLASP 306
G + L +V E+V + + QV + +I LH L S
Sbjct: 92 GERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSV 150
Query: 307 SIIHSDVKSANILLDD-NYTAKVSDFES 333
++ H D+K N+L+++ + T K+ DF S
Sbjct: 151 NVCHRDIKPHNVLVNEADGTLKLCDFGS 178
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 242 NVVKILGLCLE--TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
N++K++ + +K LV+E+++N + Q+L ++ + E A+ Y
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFK-----QLYQILTDFDIRFYMY-ELLKALDY 152
Query: 300 LHSLASPSIIHSDVKSANILLD 321
HS I+H DVK N+++D
Sbjct: 153 CHS---KGIMHRDVKPHNVMID 171
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 242 NVVKILGLCLE--TKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
N++K++ + +K LV+E+++N + Q+L ++ + E A+ Y
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFK-----QLYQILTDFDIRFYMY-ELLKALDY 147
Query: 300 LHSLASPSIIHSDVKSANILLD 321
HS I+H DVK N+++D
Sbjct: 148 CHS---KGIMHRDVKPHNVMID 166
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 16/131 (12%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
++H N+V+ + L +V E+ S G L I + + + + S +
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 128
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTA--KVSDFESLVPISSDDETAMSTMIRGTVGY 355
Y H++ + H D+K N LLD + K+ DF + + + + TVG
Sbjct: 129 SYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDF------GYSKSSVLHSQPKSTVG- 178
Query: 356 LDPEYAHTELL 366
P Y E+L
Sbjct: 179 -TPAYIAPEVL 188
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILL 320
KT L +A + S I Y+H S + IH DVK N L+
Sbjct: 105 KTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLM 138
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 53/131 (40%), Gaps = 16/131 (12%)
Query: 238 VKHKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAI 297
++H N+V+ + L +V E+ S G L I + + + + S +
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ---QLISGV 127
Query: 298 HYLHSLASPSIIHSDVKSANILLDDNYTA--KVSDFESLVPISSDDETAMSTMIRGTVGY 355
Y H++ + H D+K N LLD + K+ DF + + + + TVG
Sbjct: 128 SYCHAM---QVCHRDLKLENTLLDGSPAPRLKICDF------GYSKSSVLHSQPKSTVG- 177
Query: 356 LDPEYAHTELL 366
P Y E+L
Sbjct: 178 -TPAYIAPEVL 187
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILL 320
KT L +A + S I Y+H S + IH DVK N L+
Sbjct: 105 KTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLM 138
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 14/128 (10%)
Query: 240 HKNVVKILGLCLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY 299
H+NV++++ E LV+E + G++ +IH + N + + ASA+ +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH---FNELEASVVVQDVASALDF 126
Query: 300 LHSLASPSIIHSDVKSANILLDDN---YTAKVSDFESLVPIS-SDDETAMST----MIRG 351
LH+ I H D+K NIL + K+ DF+ I + D + +ST G
Sbjct: 127 LHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCG 183
Query: 352 TVGYLDPE 359
+ Y+ PE
Sbjct: 184 SAEYMAPE 191
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Query: 284 KTCLRIAAETASAIHYLHSLASPSIIHSDVKSANILL 320
KT L +A + S I Y+H S + IH DVK N L+
Sbjct: 103 KTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLM 136
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSD 340
S + L +L H DV+ N+++D A++ DF S+V D
Sbjct: 346 GSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSD 340
S + L +L H DV+ N+++D A++ DF S+V D
Sbjct: 346 GSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 16/146 (10%)
Query: 194 LGMGGFGSVYKGV-LPDNTQVAVKKYMCADEIRI---TEWEFLGIISQVKHKNVVKILGL 249
+G G +GSV +VAVKK + I + L ++ +KH+NV+ +L +
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 250 CLETKVTLLVYEFVSNGALSHYIHDKSSQVLKNWKTCLRIAAETASAIHY-----LHSLA 304
+ + EF ++H + + ++K C ++ + + Y L +
Sbjct: 90 FTPARS---LEEFNDVYLVTHLMGADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIH 142
Query: 305 SPSIIHSDVKSANILLDDNYTAKVSD 330
S IIH D+K +N+ ++++ K+ D
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILD 168
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 286 CLR-IAAETASAIHYLHSLASPSIIHSDVKSANILL--DDNYTAKVS 329
C++ I + + YLHS IIH+D+K NIL+ DD Y +++
Sbjct: 141 CVKSIIRQVLQGLDYLHSKCK--IIHTDIKPENILMCVDDAYVRRMA 185
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 294 ASAIHYLHSLASPSIIHSDVKSANILLDDNYTAKVSDFESLVPISSD 340
S + L +L H DV+ N+++D A++ DF S+V D
Sbjct: 346 GSLLRSLAALEKKGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.132 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,476,218
Number of Sequences: 62578
Number of extensions: 444842
Number of successful extensions: 2961
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 592
Number of HSP's that attempted gapping in prelim test: 1759
Number of HSP's gapped (non-prelim): 1179
length of query: 496
length of database: 14,973,337
effective HSP length: 103
effective length of query: 393
effective length of database: 8,527,803
effective search space: 3351426579
effective search space used: 3351426579
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)