BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047386
(581 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SRU7|TRM2_ARATH Probable tRNA (guanine(26)-N(2))-dimethyltransferase 2
OS=Arabidopsis thaliana GN=At3g02320 PE=2 SV=3
Length = 589
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/555 (79%), Positives = 483/555 (87%), Gaps = 11/555 (1%)
Query: 3 DLNDYTIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTT 62
DLNDYT+IKEGEAEILMH KN+VF+NK QVNNRD+SIAV+R F+SKR QEHEA SKRT
Sbjct: 4 DLNDYTVIKEGEAEILMHKKNQVFFNKAQVNNRDMSIAVLREFLSKRKQEHEAKSSKRTR 63
Query: 63 SAPKASEKDG----EEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLR 118
A K EKD +EE P E+ +N NG+ E +E D P +S++ K TER R
Sbjct: 64 PASKVIEKDASEASKEETPSENGMN---NGDHEVASE---DGPSSVSKDPAKTTERFAPR 117
Query: 119 QLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVE 178
+ KPP+VLEALSASGLRALRYARE+EGIGQVVALDND ASVEAC+RNIKFNGSVA SKVE
Sbjct: 118 EPKPPKVLEALSASGLRALRYAREIEGIGQVVALDNDLASVEACQRNIKFNGSVAISKVE 177
Query: 179 SHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNG 238
SH DARV+MLTHPKEFDVVDLDPYGSPS+FLDSAIQSV DGG+LMCTATDMAVLCGGNG
Sbjct: 178 SHHTDARVHMLTHPKEFDVVDLDPYGSPSIFLDSAIQSVTDGGLLMCTATDMAVLCGGNG 237
Query: 239 EVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYT 298
EVCYSKYGSYPLR KYCHEMALRILLA IESHANRYKRYI PVLSVQMDFYVRVFVR+YT
Sbjct: 238 EVCYSKYGSYPLRAKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDFYVRVFVRVYT 297
Query: 299 SASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKK 358
SASAMK+TPLKLSYVYQCIGCDSFHLQPVGR+ KNNSVRYLP GPVV Q C+ CGKK
Sbjct: 298 SASAMKNTPLKLSYVYQCIGCDSFHLQPVGRSLP-KNNSVRYLPAIGPVVKQDCNHCGKK 356
Query: 359 FNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHN 418
+NMGGPIWS +HD EWV SIL VKSMKDRYPAYDRISAVLTT+SEEL DVPLFLSLHN
Sbjct: 357 YNMGGPIWSAPMHDPEWVTSILNSVKSMKDRYPAYDRISAVLTTVSEELLDVPLFLSLHN 416
Query: 419 LCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVKNHPVKA 478
LC+TLKC SPSA MFRSAVINA YR+SGTHVNPLG+KTDAPM VIWDIMRCWVKNHP+KA
Sbjct: 417 LCATLKCISPSAAMFRSAVINANYRISGTHVNPLGMKTDAPMEVIWDIMRCWVKNHPIKA 476
Query: 479 QLPDQPGSVILAKEPTLQANFARAVASLSKAQAKKVARFLPNPEKHWGPKPRAGRQITSK 538
Q P+QPGSVIL+KEP+ + +F+R + SLSKAQAKKVARFLPNPEKHWGPK RAGRQITSK
Sbjct: 477 QSPEQPGSVILSKEPSHEVDFSRHIGSLSKAQAKKVARFLPNPEKHWGPKLRAGRQITSK 536
Query: 539 HISLLGAEAVNGHLS 553
H+SL+G EAVNGHLS
Sbjct: 537 HVSLIGHEAVNGHLS 551
>sp|Q9LFU5|TRM1_ARATH Probable tRNA (guanine(26)-N(2))-dimethyltransferase 1
OS=Arabidopsis thaliana GN=At5g15810 PE=2 SV=3
Length = 593
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/553 (79%), Positives = 485/553 (87%), Gaps = 7/553 (1%)
Query: 3 DLNDYTIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTT 62
DLNDYT+IKEGEAE+LMH KN+VF+NK QVNNRD+SIAV+RAFI KR QEHEAMLSKR
Sbjct: 4 DLNDYTVIKEGEAEVLMHKKNQVFFNKAQVNNRDMSIAVLRAFIIKRKQEHEAMLSKRAR 63
Query: 63 SAPKASEKDGEEEAPDES-VVNENSNGEIERPAEIS-QDEPCCISEEAVKPTERNVLRQL 120
S+ K EKD E + +E+ N + NG+ E++ QD P +EA K + R+L
Sbjct: 64 SSGKVVEKDVSETSKEETPTENGDDNGKTNGEHEVTTQDGP----KEAAKTAYESARREL 119
Query: 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESH 180
KPPRVLEALSASGLRALRYAREVEGIGQVVALDND ASVEAC+RNIKFNG ++ SKVESH
Sbjct: 120 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDPASVEACQRNIKFNGLMSTSKVESH 179
Query: 181 LADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEV 240
L DARV+ML+HPK+FDVVDLDPYG+PS+FLDSA+QSVADGG+LMCTATDMAVLCG NGEV
Sbjct: 180 LTDARVHMLSHPKDFDVVDLDPYGAPSIFLDSAVQSVADGGLLMCTATDMAVLCGANGEV 239
Query: 241 CYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSA 300
CYSKYGSYPL+GKYCHEMALRILLA IESHANRYKRYI PVLSVQMDFYVRVFVR+YTSA
Sbjct: 240 CYSKYGSYPLKGKYCHEMALRILLASIESHANRYKRYIVPVLSVQMDFYVRVFVRVYTSA 299
Query: 301 SAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFN 360
SAMK+TPLKLSYVYQCIGCDSFHLQ VGR+ KNNSVRYLPG GPVVPQ C+ CGKK+N
Sbjct: 300 SAMKNTPLKLSYVYQCIGCDSFHLQSVGRSLP-KNNSVRYLPGVGPVVPQDCTHCGKKYN 358
Query: 361 MGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLC 420
MGGPIWS IHDQEWVNSIL VKSMKDRYPAYDRI AVLTTISEELPDVPLFLSLH+L
Sbjct: 359 MGGPIWSAPIHDQEWVNSILNGVKSMKDRYPAYDRICAVLTTISEELPDVPLFLSLHSLS 418
Query: 421 STLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVKNHPVKAQL 480
+TLKCTSPSA +FRSAVINA YRVSG+HVNPLG+KTDAPM +IWDIMRCWVKNHP+K Q
Sbjct: 419 ATLKCTSPSAALFRSAVINAKYRVSGSHVNPLGIKTDAPMEIIWDIMRCWVKNHPIKPQS 478
Query: 481 PDQPGSVILAKEPTLQANFARAVASLSKAQAKKVARFLPNPEKHWGPKPRAGRQITSKHI 540
P+ PGSVIL+KEP+ QA+F+R V SLSKAQAKKVARFLPNPEKHWGPK RAGR ITSKH+
Sbjct: 479 PEHPGSVILSKEPSHQADFSRHVGSLSKAQAKKVARFLPNPEKHWGPKIRAGRTITSKHV 538
Query: 541 SLLGAEAVNGHLS 553
SLLG EAVNGHL+
Sbjct: 539 SLLGHEAVNGHLN 551
>sp|Q3TX08|TRM1_MOUSE tRNA (guanine(26)-N(2))-dimethyltransferase OS=Mus musculus
GN=Trmt1 PE=1 SV=2
Length = 663
Score = 422 bits (1084), Expect = e-117, Method: Compositional matrix adjust.
Identities = 225/535 (42%), Positives = 321/535 (60%), Gaps = 41/535 (7%)
Query: 10 IKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTTSAPKASE 69
+ EG A+I+ + NEVFYN Q NRD++ AV+ F L + E
Sbjct: 58 VTEGAAKIVFPSANEVFYNPVQEFNRDLTCAVITEFA-------RIHLGAKGIQIKVPGE 110
Query: 70 KDGEEEAPD-----ESVVNENSN---GEIERPAEISQDEPCCISEEAVKPTERNVLRQLK 121
KD E+ A D E +N N G+ R A + + I EE +
Sbjct: 111 KDSEKIAVDLSDQEEETAGKNENLAPGDWPRTAAVGE-----ICEEGL------------ 153
Query: 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL 181
RVLE L+ASGLR++R+A EV G+ VVA D +VE RN++ NG V+ +
Sbjct: 154 --RVLEGLAASGLRSIRFALEVPGLQSVVANDASARAVELMHRNVELNG--VAHLVQPNQ 209
Query: 182 ADARVYMLTH---PKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNG 238
ADAR+ M H P+ FDV+DLDPYGSP+ FLD+A+Q+V+DGG+L T TDMAVL G +G
Sbjct: 210 ADARMLMYQHQKAPERFDVIDLDPYGSPAPFLDAAVQAVSDGGLLCVTCTDMAVLAGNSG 269
Query: 239 EVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYT 298
E CYSKYG+ L+ + CHEMALRI+L ++ HAN Y+RYI P+LS+ DFY+RVFVR++T
Sbjct: 270 ETCYSKYGAMALKSRACHEMALRIVLHSLDLHANCYQRYIVPLLSISADFYIRVFVRVFT 329
Query: 299 SASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKK 358
+ +KS+ K + V+QC+GC +F+LQ +G+ + + +++ GP V C CG++
Sbjct: 330 GQAKVKSSASKQALVFQCVGCGAFYLQRLGKASGDPGGRIKFSAACGPPVTPECEHCGQR 389
Query: 359 FNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHN 418
+GGP+W+ IHD ++V +L V + R+ RI VL+ ++EELPDVPL+ +L
Sbjct: 390 HQLGGPMWAEPIHDLDFVGRVLDAVTTNPGRFHTSMRIQGVLSVVTEELPDVPLYYTLDQ 449
Query: 419 LCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVKNHPVKA 478
L ST+ C +P + RSA+++AG+RVS +H +KTDAP +WDIMRCW K PVK
Sbjct: 450 LSSTIHCNTPRLLQLRSALLHAGFRVSLSHACKNAVKTDAPPEALWDIMRCWEKECPVKR 509
Query: 479 QLPDQ--PGSVILAKEPTLQANFARAVASLSKAQAKKVARFLPNPEKHWGPKPRA 531
+ + P ILA EP L+ANF + ++ + + RF NPE +WGP+PRA
Sbjct: 510 ERLSESSPAFRILAVEPRLKANFNIREDANPSSRQRGLKRFQANPEANWGPRPRA 564
>sp|Q9NXH9|TRM1_HUMAN tRNA (guanine(26)-N(2))-dimethyltransferase OS=Homo sapiens
GN=TRMT1 PE=1 SV=1
Length = 659
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 219/534 (41%), Positives = 313/534 (58%), Gaps = 33/534 (6%)
Query: 8 TIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTTSAPKA 67
T + EG A+I + NEVFYN Q NRD++ AV+ F L +
Sbjct: 55 TTVTEGAAKIAFPSANEVFYNPVQEFNRDLTCAVITEFA-------RIQLGAKGIQIKVP 107
Query: 68 SEKDGEEEAPDESVVNENSNGEIERPAEISQDEPCC-----ISEEAVKPTERNVLRQLKP 122
EKD ++ D S E E S D+P I EE +
Sbjct: 108 GEKDTQKVVVDLSEQEEEKVELKESENLASGDQPRTAAVGEICEEGLH------------ 155
Query: 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA 182
VLE L+ASGLR++R+A EV G+ VVA D +V+ RRN++ N V+ A
Sbjct: 156 --VLEGLAASGLRSIRFALEVPGLRSVVANDASTRAVDLIRRNVQLND--VAHLVQPSQA 211
Query: 183 DARVYMLTHPK---EFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGE 239
DAR+ M H + FDV+DLDPYGSP+ FLD+A+Q+V++GG+L T TDMAVL G +GE
Sbjct: 212 DARMLMYQHQRVSERFDVIDLDPYGSPATFLDAAVQAVSEGGLLCVTCTDMAVLAGNSGE 271
Query: 240 VCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTS 299
CYSKYG+ L+ + CHEMALRI+L ++ AN Y+R++ P+LS+ DFYVRVFVR++T
Sbjct: 272 TCYSKYGAMALKSRACHEMALRIVLHSLDLRANCYQRFVVPLLSISADFYVRVFVRVFTG 331
Query: 300 ASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKF 359
+ +K++ K + V+QC+GC +FHLQ +G+ + + ++ GP V C CG++
Sbjct: 332 QAKVKASASKQALVFQCVGCGAFHLQRLGKASGVPSGRAKFSAACGPPVTPECEHCGQRH 391
Query: 360 NMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNL 419
+GGP+W+ IHD ++V +L V + R+ +RI VL+ I+EELPDVPL+ +L L
Sbjct: 392 QLGGPMWAEPIHDLDFVGRVLEAVSANPGRFHTSERIRGVLSVITEELPDVPLYYTLDQL 451
Query: 420 CSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVKNHPVKAQ 479
ST+ C +PS + RSA+++A +RVS +H +KTDAP +WDIMRCW K PVK +
Sbjct: 452 SSTIHCNTPSLLQLRSALLHADFRVSLSHACKNAVKTDAPASALWDIMRCWEKECPVKRE 511
Query: 480 LPDQ--PGSVILAKEPTLQANFARAVASLSKAQAKKVARFLPNPEKHWGPKPRA 531
+ P IL+ EP LQANF + ++ + + RF NPE +WGP+PRA
Sbjct: 512 RLSETSPAFRILSVEPRLQANFTIREDANPSSRQRGLKRFQANPEANWGPRPRA 565
>sp|Q9VK89|TRM1_DROME Probable tRNA (guanine(26)-N(2))-dimethyltransferase OS=Drosophila
melanogaster GN=CG6388 PE=2 SV=1
Length = 578
Score = 389 bits (1000), Expect = e-107, Method: Compositional matrix adjust.
Identities = 229/578 (39%), Positives = 317/578 (54%), Gaps = 48/578 (8%)
Query: 9 IIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTTSAPKAS 68
+I+E AEI+ + VFYN Q NRD+SIA + + + +E R+ A K
Sbjct: 19 VIRERNAEIV--SGGNVFYNPVQEFNRDLSIAALNVYRQRLTKE-------RSEKALKKQ 69
Query: 69 EKDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLEA 128
K +E+ E E+ + +D P EA E + R+LEA
Sbjct: 70 RKKVKEQ-------------EDEKTTPVPEDPPVY---EAGTRYEDGL-------RILEA 106
Query: 129 LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM 188
L+A+GLR++RYA+E+ G+ Q+VA D + +V + NI+ N + A +Y+
Sbjct: 107 LAATGLRSIRYAQEIAGVRQIVANDLSRQAVASINTNIRHNKVEELIEPSHSDAMTLMYL 166
Query: 189 LTHP-KEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGS 247
T P K FD VDLDPYG P+ FLD A+Q + DGG+L+ TATDMAVL G E CY KYGS
Sbjct: 167 STQPEKRFDAVDLDPYGCPNRFLDGAMQCLVDGGLLLVTATDMAVLAGNAPEACYVKYGS 226
Query: 248 YPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMKSTP 307
PLR K CHEMALRILL CIESHANRY +YIEP+LS+ DFY+R+FVR+Y + K +
Sbjct: 227 VPLRMKCCHEMALRILLHCIESHANRYGKYIEPLLSISADFYIRIFVRVYVGQAQCKLSM 286
Query: 308 LKLSYVYQCIGCDSFHLQPVGRTASNKN----NSVRYLPGFGPVVPQLCSDCGKKFNMGG 363
K S++YQC GC++F LQP+G T N +++ GP V C CG + ++GG
Sbjct: 287 SKQSWIYQCTGCETFTLQPLGITKPNPTAGNPQQLKFGIPTGPAVNSQCEHCGHRHHLGG 346
Query: 364 PIWSGRIHDQEWVNSILGEVK-SMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCST 422
PIWS IH+ E+V +L V+ + RI VL+ + EEL DVPL+ + LC
Sbjct: 347 PIWSAPIHNPEFVQDLLTAVQETTLQSLGTQRRIVGVLSMVQEELQDVPLYYTPDKLCCV 406
Query: 423 LKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVKNHPVKAQ--L 480
LK + FRSA+++AGYRVS +H + LKT+AP V+WDI+R W K HPV + +
Sbjct: 407 LKLEIVPMLKFRSAILHAGYRVSYSHASKNSLKTNAPPAVLWDILRSWSKRHPVNPERMI 466
Query: 481 PDQPGSVILAKEPTLQANFARAVASLS-KAQAKKVARFLPNPEKHWGPKPRAGRQITSKH 539
P P + IL+KE T F + K++ ++RF NP HWGP RA I
Sbjct: 467 PGSPLAAILSKECTAVYEFDELHPEANPKSRKSALSRFQENPTPHWGPGTRATIMIGDNK 526
Query: 540 ISLLGAEAVNGHLSLEDGEEPDAKRQKTEDTTQKTEDA 577
+ + + + A Q+ ED Q T A
Sbjct: 527 LP-------KSYRNQNKKQRHKASEQQAEDDQQDTPQA 557
>sp|Q23270|TRM1_CAEEL tRNA (guanine(26)-N(2))-dimethyltransferase OS=Caenorhabditis
elegans GN=trm-1 PE=1 SV=1
Length = 526
Score = 332 bits (851), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 206/552 (37%), Positives = 300/552 (54%), Gaps = 69/552 (12%)
Query: 2 EDLNDYTIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRT 61
ED + T+I+EG+A++ H VFYN Q NRD+++ V+R F + + E +T
Sbjct: 16 EDKEEVTVIQEGQAKVGFHGP--VFYNPVQEFNRDLTVTVLRQFSADHQKWAEEQKQLKT 73
Query: 62 TSAPKASEKDGEEEAPDE-SVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQL 120
EEE P + + + N +G+I
Sbjct: 74 -----------EEEPPKKKNKLAINEDGKI------------------------------ 92
Query: 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESH 180
R+L+ALSASGLRALR+++EV +G ++A D +V + + N+K NG VE+H
Sbjct: 93 ---RILDALSASGLRALRFSKEVPNVGFIMANDFSDNAVASIQENVKLNG--VEDIVEAH 147
Query: 181 LADARVYMLTH---PKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGN 237
DA + M+ H K F VDLDPYG+ S FLDSA+Q VAD G+LM T TDMAVLCG
Sbjct: 148 FGDAVMTMMEHRGIDKRFHAVDLDPYGTASTFLDSAVQCVADRGILMVTCTDMAVLCGNT 207
Query: 238 GEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIY 297
E CY+KY + R K CHE+ LRILL I+S ANRY RYIEP++S+ +DFYVRVFVR++
Sbjct: 208 PEACYNKYDAVTTRMKCCHEVGLRILLRAIDSAANRYTRYIEPLVSISVDFYVRVFVRVH 267
Query: 298 TSASAMKSTPLKLSYVYQCIGCDSFH-LQPVGRTASNKNN-----SVRY-LPGFGPVVPQ 350
T A K + K+ V C GC S L + R N+ + +VR+ + G G
Sbjct: 268 TGAFQAKQSGTKVGTVLVCSGCHSMEPLVLLKRGEGNQQSKYSIPTVRHSISGPG----N 323
Query: 351 LCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSM--KDRYPAYDRISAVLTTISEELP 408
C C + GPI+ IH + +V S+L +KS +R + R+ VLT ++EEL
Sbjct: 324 RCIHCLLPLHQIGPIYLAPIHSKPFVTSLLERLKSTPEAERLGTHGRLQGVLTMVNEELD 383
Query: 409 DVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
DV L+ + + + +K + P + RSA++NAG++VSG+H NP +KT+APM ++WDI R
Sbjct: 384 DV-LYYEHNQMANVVKVSVPKSQSVRSAILNAGFKVSGSHCNPRAIKTNAPMHLLWDIYR 442
Query: 469 CWVKNHPV---KAQLPDQPGSVILAKEPTLQANFARAVASLSKAQAKKVARFLPNPEKHW 525
K+ V K + G IL + T NF ++ +A+ + + RF N K+W
Sbjct: 443 QVAKDTSVDREKRLAKESAGYHILGQPITNTVNFTLHPGAIEQAKKENLVRFQCNKGKNW 502
Query: 526 GPKPRAGRQITS 537
GP+ +A + S
Sbjct: 503 GPRQKAKGSVNS 514
>sp|Q9P804|TRM1_SCHPO tRNA (guanine(26)-N(2))-dimethyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=trm1 PE=1 SV=1
Length = 548
Score = 329 bits (844), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/534 (34%), Positives = 288/534 (53%), Gaps = 27/534 (5%)
Query: 10 IKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTTSAPKASE 69
+ EG A I NEVFYN Q NRD+S+ +RA+ R+++ A R
Sbjct: 32 LTEGSAIIPFSNPNEVFYNPVQQFNRDLSVTAIRAWSETRSKKIVAKSHHRHQLL----- 86
Query: 70 KDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLEAL 129
D E E++ ++ + E+ + T+ + +LEAL
Sbjct: 87 -DQNSELSQENLTKCDTTHDFEK--------------NCSEKTDSTSADNIAGFTILEAL 131
Query: 130 SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML 189
SA+GLR++RYA+E+ + +++A D + +V+ +N+ +N V + DA M
Sbjct: 132 SATGLRSIRYAKELPNVKRILANDLLENAVKTIEKNVNYNN--VSDIVIPNKGDANAVMH 189
Query: 190 THPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG-GNGEVCYSKYGSY 248
+ +DV+DLDPYGS + FLD+A+QSV+ G+L T TD AVL G E C+S YG
Sbjct: 190 MNKFHYDVIDLDPYGSAAPFLDAAVQSVSKDGLLCITCTDSAVLAGNAYPEKCFSNYGGS 249
Query: 249 PLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMKSTPL 308
LR +CHE A+R LL I + A +Y R I+P+LS+ +DFY RVFV+I +K+
Sbjct: 250 SLRSNFCHEQAVRHLLYAIAASAAKYGRAIKPLLSLSIDFYFRVFVQIKAKPVLVKNLQS 309
Query: 309 KLSYVYQCIGCDSFHLQPVGRTASNK-NNSVRYLPGFGPVVPQLCSDCGKKFNMGGPIWS 367
+ +Y C GC SF QP+G+T+ + + ++ GP V C CG ++GGP+W
Sbjct: 310 QSLLIYHCSGCGSFAEQPLGKTSPGRLPGTTKFSNASGPPVSANCEHCGYVHHVGGPLWG 369
Query: 368 GRIHDQEWVNSILGEVKSMK-DRYPAYDRISAVLTTISEELPDVPLFLSLHNLCSTLKCT 426
G +HD E++ + + + + Y RI +L EELPDVP + L +CS L+
Sbjct: 370 GPLHDAEFLKKMRAIAEDLDPEVYGTKRRILGMLALADEELPDVPFYFVLSQICSVLRSQ 429
Query: 427 SPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVKNHPVKAQ--LPDQP 484
SP +F SA++NAGYRVSG+H +KT+AP +WD++R W+K+HPVK +
Sbjct: 430 SPPQNIFVSALLNAGYRVSGSHAKSNAIKTNAPWSFVWDVLRSWIKDHPVKLENISKTSA 489
Query: 485 GSVILAKEPTLQANFARAVASLSKAQAKKVARFLPNPEKHWGPKPRAGRQITSK 538
G+ IL K PT + +F S ++ + R+ NP ++WGPK + G++ ++
Sbjct: 490 GAAILEKTPTAEVDFTFRPDSEFASKKEGYTRYQMNPTENWGPKSKPGKRTIAE 543
>sp|P15565|TRM1_YEAST tRNA (guanine(26)-N(2))-dimethyltransferase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TRM1 PE=1 SV=1
Length = 570
Score = 279 bits (714), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 178/556 (32%), Positives = 295/556 (53%), Gaps = 55/556 (9%)
Query: 3 DLNDYTIIKEGEAEILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTT 62
++ D+ I+KEG+AEIL K VFYN Q NRD+S+ ++A+ + +E + + +
Sbjct: 38 NIEDFNIVKEGKAEILFPKKETVFYNPIQQFNRDLSVTCIKAWDNLYGEECGQKRNNKKS 97
Query: 63 SAPKASEKDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKP 122
+ +E + D S + NG +EAV + RN +P
Sbjct: 98 KKKRCAETND-----DSSKRQKMGNGS---------------PKEAVGNSNRN-----EP 132
Query: 123 -PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL 181
+LEALSA+GLRA+RYA E+ + +V+A D +VE+ +RN+++N + V+ +L
Sbjct: 133 YINILEALSATGLRAIRYAHEIPHVREVIANDLLPEAVESIKRNVEYNS--VENIVKPNL 190
Query: 182 ADARVYMLTHP---KEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG-GN 237
DA V M + +F V+DLDPYG+ + F+D+AIQS+ +GG+++ T TD++VL G G
Sbjct: 191 DDANVLMYRNKATNNKFHVIDLDPYGTVTPFVDAAIQSIEEGGLMLVTCTDLSVLAGNGY 250
Query: 238 GEVCYSKYGSYPL-RGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRI 296
E C++ YG + + HE ALR++L ++ A +YK+ +EP+LS+ +DFYVRVFV++
Sbjct: 251 PEKCFALYGGANMVSHESTHESALRLVLNLLKQTAAKYKKTVEPLLSLSIDFYVRVFVKV 310
Query: 297 YTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTAS----NKNNSVRYLPGFGPVVPQLC 352
TS +K+ Y C C S+H QP+GR + N +Y GP V C
Sbjct: 311 KTSPIEVKNVMSSTMTTYHCSRCGSYHNQPLGRISQREGRNNKTFTKYSVAQGPPVDTKC 370
Query: 353 SDCGKKFNMGGPIWSGRIHDQEWVNSIL----GEVKSMKDRYPAYDRISAVLTTISEELP 408
C +++ GP+++G +H++E++ +L E + D Y RI +L+ EL
Sbjct: 371 KFCEGTYHLAGPMYAGPLHNKEFIEEVLRINKEEHRDQDDTYGTRKRIEGMLSLAKNELS 430
Query: 409 DVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIM- 467
D P + S +++ S +K P + + + G+ S TH P LKT+AP IW +M
Sbjct: 431 DSPFYFSPNHIASVIKLQVPPLKKVVAGLGSLGFECSLTHAQPSSLKTNAPWDAIWYVMQ 490
Query: 468 RCWVKNHPVKAQLPDQPGSVILAKEP-----TLQANFARAVA--------SLSKAQAKKV 514
+C + + P+ G IL+ P T+++ + ++ ++ K + K+
Sbjct: 491 KCDDEKKDLSKMNPNTTGYKILSAMPGWLSGTVKSEYDSKLSFAPNEQSGNIEKLRKLKI 550
Query: 515 ARFLPNPEKHWGPKPR 530
R+ NP K+WGPK R
Sbjct: 551 VRYQENPTKNWGPKAR 566
>sp|O27258|TRM1_METTH tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=trm1 PE=3 SV=1
Length = 380
Score = 187 bits (475), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 179/343 (52%), Gaps = 23/343 (6%)
Query: 125 VLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA 184
V + S SG+RA+RY EVEG+ + A D + +VE IK N + E DA
Sbjct: 55 VADTFSGSGIRAIRYLVEVEGVSEAFANDINPLAVEC----IKNNSVINSVSPEVSREDA 110
Query: 185 RVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSK 244
+++ ++ FDV+D+DP+G+P+ F+DSA S + +L TATD + LCG + C K
Sbjct: 111 SIFLRSNHGRFDVIDIDPFGTPAPFMDSAAASARNNSLLAVTATDTSSLCGTYIKPCLRK 170
Query: 245 YGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMK 304
Y S PL+ +YCHE LRIL + RY++ +LS Y+R+++R+ A
Sbjct: 171 YSSRPLKTEYCHETGLRILAGFTAMNLARYRKAASVLLSHSSQHYMRLYIRVRRGARRAD 230
Query: 305 STPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGP 364
+ + ++ C C H + V GF P+ + C CG + ++ GP
Sbjct: 231 ESIRNIGFMLHCFRC--LHHEHVN--------------GFAPLKRE-CPHCGAEMDVAGP 273
Query: 365 IWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCSTLK 424
+W G I D +++ ++GEV++ K+ A D + +L +E P F +H +CS L
Sbjct: 274 LWVGDIQDSKFIGEMIGEVEN-KELNTAGD-VLKLLKGCLDEAGMPPGFYDIHEVCSKLG 331
Query: 425 CTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIM 467
++P + AG+RVS TH+ P G++TDA +G I +++
Sbjct: 332 RSAPPLRDVMDGLEAAGFRVSRTHIRPTGIRTDAGIGEIEEVL 374
>sp|Q2NI56|TRM1_METST tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanosphaera
stadtmanae (strain DSM 3091) GN=trm1 PE=3 SV=1
Length = 390
Score = 186 bits (473), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 171/336 (50%), Gaps = 21/336 (6%)
Query: 125 VLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA 184
+ +A +G+R RY++E+ G+ +VV D + +VE ++N++ N S VE DA
Sbjct: 57 ICDAFGGTGIRGARYSKEIHGVEKVVVGDVNPLAVEISKKNMQLNN---ISNVEVQKNDA 113
Query: 185 RVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSK 244
+ + ++ FDVVD+DP+G+P++F S ++ GG++ +ATD + LCG + C K
Sbjct: 114 NILLQSNKGLFDVVDIDPFGTPAMFTQSTAANIRPGGLICISATDTSALCGTYHDPCLRK 173
Query: 245 YGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMK 304
YG+ PL+ +YCHE +RIL+A I + ++Y+ + S + Y+RV+ +
Sbjct: 174 YGAKPLKTEYCHENGIRILIAFISRNLAVNQKYLHVLFSHSTEHYMRVYAIVKRGGKKTN 233
Query: 305 STPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGP 364
+ ++ C C H + GF P +P C +CG ++++ GP
Sbjct: 234 KALDNIGFIAHCPNC--LHRETT--------------YGFAPKIPHTCPECGGEYDVAGP 277
Query: 365 IWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCSTLK 424
+W G+I D+E++ + + VK++ D + ++ E F +H +C LK
Sbjct: 278 LWLGKIWDKEFIYNTMELVKNL--NLNKKDDLMSLFEKCYMEADGPVTFYDIHKICKKLK 335
Query: 425 CTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPM 460
+SP + N GY +S TH G++TD P+
Sbjct: 336 ISSPKINDVMDEIRNRGYFISRTHFKLTGMRTDMPL 371
>sp|A5UM08|TRM1_METS3 tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=trm1 PE=3
SV=1
Length = 388
Score = 185 bits (469), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 21/344 (6%)
Query: 125 VLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA 184
+ + SG+R +RY E++G+G V D + + E R N++ N +E DA
Sbjct: 60 ICDLFGGSGIRGVRYKNEIDGVGHVFINDISETANEYERHNVELNN---LKDIEIFQHDA 116
Query: 185 RVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSK 244
+++ H EFDV+D+DP+G+PS FLDSA +L TATD + LCG E C K
Sbjct: 117 SMFLRMHRGEFDVIDIDPFGTPSPFLDSAGYCSRRNSLLCVTATDTSALCGTYKEPCIRK 176
Query: 245 YGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMK 304
Y + P + +YCHE +RIL + +Y + IE LS + Y+R+++ + +
Sbjct: 177 YNAKPYKSEYCHETGIRILAGFVALTLAKYSKSIEVKLSHSTEHYMRLYIEVKKGSKKSD 236
Query: 305 STPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGP 364
+ Y+ C C NK G P +C +CG+K GP
Sbjct: 237 ECLKNIGYLSHCKHC--------LYREENK--------GLATSTPDICPECGEKLIQAGP 280
Query: 365 IWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCSTLK 424
+W G I ++E+++ ++ V+S + + + +L + E F +H +C LK
Sbjct: 281 LWLGEIQNEEFISKMI--VESENKKLNTKEDVLKLLESCRIEAKSPATFYDVHKICKILK 338
Query: 425 CTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
++P + + G+ TH NPLG+KT+AP+ I +I++
Sbjct: 339 ISAPKLDLVFGNLEKEGFEAVKTHFNPLGIKTNAPLKKIKEIIK 382
>sp|Q5JIB3|TRM1_PYRKO tRNA (guanine(26)-N(2))-dimethyltransferase OS=Pyrococcus
kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
GN=trm1 PE=3 SV=1
Length = 376
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 176/364 (48%), Gaps = 44/364 (12%)
Query: 117 LRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN--GSVAC 174
++ L P RVL+ALSA+G+R +RYA E +V D + + ++N N G +
Sbjct: 43 VKVLGPKRVLDALSATGIRGIRYALETPA-EEVWLNDISEEAYGLMKKNASLNIDGELYE 101
Query: 175 SKVESHL----------ADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLM 224
S+L DA M + + FD +DLDP+GSP FLD+A++SV G+L
Sbjct: 102 EGDRSYLWGEKLVVINKGDANRLMAENFRYFDFLDLDPFGSPVEFLDTALRSVRRNGVLA 161
Query: 225 CTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSV 284
TATD VLCG C KY + P+RG CHE LRIL+ + +A +Y +E +L+
Sbjct: 162 VTATDTGVLCGAYRNACLRKYLAEPIRGPLCHEAGLRILIGTVVRYAAKYDLGVEVLLAY 221
Query: 285 QMDFYVRVFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGF 344
D Y R F+++ + A + +L +++ ++K+ Y GF
Sbjct: 222 HRDHYFRAFLKLKSGAKKADKSLSQLGFLW-----------------ADKSGRFEYRRGF 264
Query: 345 GPVVPQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTIS 404
P P GP+W G + D+ +V +L +S +D A+ + + L IS
Sbjct: 265 LPDKP----------GASGPLWLGPLKDESFVEELL---ESARDHPLAHKKTLSFLQLIS 311
Query: 405 EELPDVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIW 464
EEL DVP H L T P + + G+ + TH +P +KTDAP GV+
Sbjct: 312 EEL-DVPFHYDTHTLARACSLTPPKLDVIIQRLRELGHSATKTHFSPTSVKTDAPFGVVA 370
Query: 465 DIMR 468
++M+
Sbjct: 371 EVMK 374
>sp|O59493|TRM1_PYRHO tRNA (guanine(26)-N(2))-dimethyltransferase OS=Pyrococcus
horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 /
NBRC 100139 / OT-3) GN=trm1 PE=1 SV=1
Length = 381
Score = 172 bits (437), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 176/365 (48%), Gaps = 42/365 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNI--KFNGSVA 173
+L L P VL+ALSA+G+R +R+A E +V D + + E +RN+ F+G +
Sbjct: 45 LLNILNPKIVLDALSATGIRGIRFALETPA-EEVWLNDISEDAYELMKRNVMLNFDGELR 103
Query: 174 CSKVESHLADARVYMLTHP----------KEFDVVDLDPYGSPSVFLDSAIQSVADGGML 223
SK + L + ++ H + F +DLDP+GSP FLD+A++S G+L
Sbjct: 104 ESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGIL 163
Query: 224 MCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLS 283
TATD A LCG + C KY + PLRG+ CHE+ RIL+ I +A +Y I+ +L+
Sbjct: 164 GVTATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVILA 223
Query: 284 VQMDFYVRVFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPG 343
D Y R FV++ A T KL Y+Y F L+ G
Sbjct: 224 YYKDHYFRAFVKLKDGARKGDETLEKLGYIYFDDKTGKFELE----------------QG 267
Query: 344 FGPVVPQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTI 403
F P P N GP+W G + D++ V+ ++ E +S+ + +L I
Sbjct: 268 FLPTRP----------NAYGPVWLGPLKDEKIVSKMVKEAESLS--LARKKQALKLLKMI 315
Query: 404 SEELPDVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVI 463
+EL D+PLF H + LK + SA+ GY + TH +P G+KT AP V
Sbjct: 316 DQEL-DIPLFYDTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVF 374
Query: 464 WDIMR 468
+ ++
Sbjct: 375 IETIK 379
>sp|Q8SR99|TRM1_ENCCU tRNA (guanine(26)-N(2))-dimethyltransferase OS=Encephalitozoon
cuniculi (strain GB-M1) GN=TRM1 PE=1 SV=1
Length = 432
Score = 169 bits (429), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/417 (29%), Positives = 204/417 (48%), Gaps = 57/417 (13%)
Query: 70 KDGEEEA-PDESVVNENSNGEIERPAE-ISQDEPCCISEEAVKPTERNVLRQLKPPRVLE 127
KDG E +ES V + PA+ ++D IS E VK + RVL+
Sbjct: 4 KDGARETISEESTVITKNEWTFFNPAQKFNRD----ISIEVVKEC----FKDRASIRVLD 55
Query: 128 ALSASGLRALRYAREVEGIGQVVALDND--KASVEACRRNIKFNGSVACSKVESHL---- 181
A+SA+GLR +RY +E IG + ND ++SV+ R N+ NG S L
Sbjct: 56 AMSATGLRGIRYLKE---IGNSIVYLNDISQSSVDTIRSNVLLNGIEDAEYFGSDLQGIK 112
Query: 182 -----------ADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDM 230
+D V M + P FDV+D+DP+GS S ++DSA++++ G+L TATD
Sbjct: 113 ESGNARANVVKSDCNVLMTSLPCFFDVIDIDPFGSCSEYIDSALRAIRHKGILCLTATDK 172
Query: 231 AVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYV 290
VLC N C KY + ++G +E+ LR +++ + A+++ +EPV+S+ +DFYV
Sbjct: 173 GVLC-SNERKCLIKYSTSIMKGMGMNEVPLRTIVSLVSRQASKFDCSVEPVMSLSIDFYV 231
Query: 291 RVFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQ 350
R+F+RI +S + S+V C+ + ++ R ++
Sbjct: 232 RIFLRIVRRNP--RSVVERNSHVLMCVCHNLAEIRSGQREIDSR---------------- 273
Query: 351 LCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CS+C ++ + GP W+G +HD + + +LG + R+ +L + +E+P +
Sbjct: 274 -CSNCSRRMRLCGPFWNGPLHDVKVIQGVLGGMNG------GNKRLLGILRYLEQEIPTM 326
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIM 467
+ + LCS L ++ A+ N GY+VS TH +KT+AP+ I ++
Sbjct: 327 -FYYEIPRLCSLLGISTIKQSRLMHALANMGYQVSYTHSELNAIKTNAPIASINKVL 382
>sp|Q9V1P3|TRM1_PYRAB tRNA (guanine(26)-N(2))-dimethyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=trm1 PE=3 SV=2
Length = 379
Score = 163 bits (413), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 117/364 (32%), Positives = 174/364 (47%), Gaps = 42/364 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNI--KFNGSV- 172
+L LKP VL+ALSA+G+R +R+A E ++ D + + ++N+ F G +
Sbjct: 42 LLNVLKPRIVLDALSATGIRGIRFALETPA-EEIWMNDISEDAYNLMKKNVLLNFKGELE 100
Query: 173 -----ACSKVESHLA----DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGML 223
A K E L DA M + F +DLDP+GSP FLD+A++SV G+L
Sbjct: 101 ESNGRAVLKSEKTLVVNHDDANRLMAEKHRYFHFIDLDPFGSPMEFLDTALRSVKRKGIL 160
Query: 224 MCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLS 283
TATD A LCG + + C KY + PLRG+ CHE+ RIL+ + +A +Y IE +L+
Sbjct: 161 GITATDGAPLCGAHPKACMRKYLAVPLRGELCHEVGTRILVGVVARYAAKYDLGIEVILA 220
Query: 284 VQMDFYVRVFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPG 343
D Y R F+++ A + L Y+Y F ++
Sbjct: 221 YYKDHYFRAFIKLKDGARKGDESLENLGYIYFDESTGKFEVE----------------RS 264
Query: 344 FGPVVPQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTI 403
F P P N GP+W G + QE V +L E+ S + + +L +
Sbjct: 265 FLPSKP----------NAYGPVWLGPLKSQEIVEEML-EI-SQQLSLARKKQAVKLLKIL 312
Query: 404 SEELPDVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVI 463
+EL DVPLF H L LK + + + + GYR S TH +P G+KTDAP V
Sbjct: 313 KDEL-DVPLFYDTHGLGRRLKIEARKIEEIINELRSLGYRASRTHFSPTGVKTDAPYEVF 371
Query: 464 WDIM 467
+++
Sbjct: 372 VNVL 375
>sp|Q12Y46|TRM1_METBU tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanococcoides
burtonii (strain DSM 6242) GN=trm1 PE=3 SV=2
Length = 386
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 121/414 (29%), Positives = 189/414 (45%), Gaps = 47/414 (11%)
Query: 61 TTSAPKASEKDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLR-- 118
T S P E G P E+ V N + E+ R ++ C +R +L+
Sbjct: 12 TVSVPVPPE--GVPFPPSEAPVFYNPHMELNRDISVAATSAC---------AKRILLKKD 60
Query: 119 -QLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV 177
+LK L+A+SASG+R LR A EV GI ++ +D A NI G
Sbjct: 61 MELKDITYLDAMSASGIRGLRIANEV-GITSILNDWSDDA-YGLILENIGLTG--VSDIA 116
Query: 178 ESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGN 237
E+ +A V M H + F++VDLDP+GSP+ +LD+A +S L TATD A LCG +
Sbjct: 117 EATCKNANVLM--HERRFNIVDLDPFGSPTPYLDAATRSAVH--FLEVTATDTAPLCGAH 172
Query: 238 GEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIY 297
KY + PL ++ EM +RILL I ++ + + P+LS YVR ++++
Sbjct: 173 FNSGMRKYAAVPLNNEFHSEMGVRILLGKIARELAKHDKGMTPLLSHATRHYVRTYLQVK 232
Query: 298 TSASAMKSTPLKLSYVYQCIGC---DSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
A L ++ C C + FH G + CS
Sbjct: 233 KGAKLADKAFKDLGFLSHCEHCGHREIFH-------------------GMAISISDHCSS 273
Query: 355 CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFL 414
CG + GP+W G++H+ ++ + +L E ++DR + L + D+P F
Sbjct: 274 CGNDVYIAGPLWLGQLHEPQYCDEVLLE---LEDRSLGTKEQAKKLILACRDELDIPFFY 330
Query: 415 SLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
H +C + ++P+ MF +A+ G VS TH + KTDA + I D++R
Sbjct: 331 DQHVICKMIGVSAPAMDMFIAALRETGANVSRTHFTGISFKTDAKIDTIKDVLR 384
>sp|P81554|TRM1_PYRFU tRNA (guanine(26)-N(2))-dimethyltransferase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=trm1
PE=1 SV=1
Length = 381
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/360 (31%), Positives = 172/360 (47%), Gaps = 41/360 (11%)
Query: 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNI--KFNGSV------ 172
KP VL+ALSA+G+R +R+A E ++ D ++ + E ++N+ F G++
Sbjct: 49 KPKIVLDALSATGIRGIRFALETPA-EEIWMNDINELAYELMKKNVLLNFKGTLKENAKR 107
Query: 173 ACSKVESHLA----DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTAT 228
A + E + DA M + F +DLDP+GSP FLD+A++SV G+L TAT
Sbjct: 108 AIFEGEKTIVINNDDANRLMAEKHRYFHFIDLDPFGSPMEFLDTALRSVKRKGILGVTAT 167
Query: 229 DMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDF 288
D A LCG + + C KY + PLRG+ CHE+ RIL+ I +A +Y +E +L+ D
Sbjct: 168 DGAPLCGAHPKACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGMEVLLAYYKDH 227
Query: 289 YVRVFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVV 348
Y R FV++ A T L YVY + GR K
Sbjct: 228 YFRAFVKLKDGAKKGDETLENLGYVYFD--------EKTGRFEVEK-------------- 265
Query: 349 PQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELP 408
S + N GP+W G + +++ V +L E+ Y + +L + EEL
Sbjct: 266 ----SFLSTRPNAYGPLWLGPLKNEKVVGEML-ELLVSGFEVANYREVLKLLHMLHEEL- 319
Query: 409 DVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
D+PLF H L LK + + GY + TH +P G+KT+AP V ++MR
Sbjct: 320 DIPLFYDTHALGKRLKIEPKKLGEIIKELKSMGYEATRTHFSPTGIKTNAPYEVFVEVMR 379
>sp|B6YUU9|TRM1_THEON tRNA (guanine(26)-N(2))-dimethyltransferase OS=Thermococcus
onnurineus (strain NA1) GN=trm1 PE=3 SV=1
Length = 377
Score = 160 bits (406), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 173/367 (47%), Gaps = 50/367 (13%)
Query: 117 LRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN------- 169
L+ L RVL+ALSA+G+R +RYA E G++ D + + N+K N
Sbjct: 43 LKALGSRRVLDALSATGIRGIRYALETPA-GEIWLNDINPNAFRLIVDNVKLNFSGELEI 101
Query: 170 -GSVACSKVESHL----ADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLM 224
G +A + E L ADA M + FD VDLDP+GSP FLDSA+++V G+L
Sbjct: 102 EGKMAVLEGEKTLVVTNADANRLMNEQFRYFDFVDLDPFGSPMEFLDSALRAVKRRGVLA 161
Query: 225 CTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSV 284
TATD VLCG C KY + P+RG+ CHE LRIL+ + +A +Y +E +L+
Sbjct: 162 ITATDTGVLCGAYRNACLRKYLAEPIRGELCHEAGLRILIGTLVRYAAKYDLGVEVLLAY 221
Query: 285 QMDFYVRVFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGF 344
D Y R F+++ A + +L Y+YQ +++ + F
Sbjct: 222 YRDHYFRAFLQLRNGAKTADKSMKQLGYLYQ-----------------DESGKFEFENTF 264
Query: 345 GPVVPQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYP-AYDRISAVLTTI 403
P K GP+W G + +QE+V E+ + +P + L +
Sbjct: 265 LP----------SKATAHGPLWLGPLKNQEFVE----ELHRLSAEHPLGSKKTQKFLGLL 310
Query: 404 SEELPDVPLFLSLHNLCST--LKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMG 461
+EL +VP F H + L+ + V+ + GY+ + TH +P LKTDAP
Sbjct: 311 KDEL-EVPFFYDTHAVARRHGLEVRKLAGVI--EILYEKGYKATRTHFSPTALKTDAPFE 367
Query: 462 VIWDIMR 468
+ + +R
Sbjct: 368 EVLEALR 374
>sp|C5A6N2|TRM1_THEGJ tRNA (guanine(26)-N(2))-dimethyltransferase OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3)
GN=trm1 PE=3 SV=1
Length = 378
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 182/367 (49%), Gaps = 47/367 (12%)
Query: 117 LRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-GS---V 172
++ L P RVL+ALSA+G+R LRY+ E +V D ++ + +N++ N GS +
Sbjct: 43 VKALSPRRVLDALSATGIRGLRYSLETSA-EEVWMNDINEDAFRLILKNLELNFGSKPVL 101
Query: 173 ACSKVE---------SHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGML 223
A + E +L DA M + + FD +DLDP+GSP FLDSA++SV G L
Sbjct: 102 ANGRAELGLPEKRLVVNLGDANKLMSENFRYFDFIDLDPFGSPVEFLDSALRSVRRRGFL 161
Query: 224 MCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLS 283
TATD VLCG C KY + P+RG+ CHE LRIL+ I +A +Y +E +L+
Sbjct: 162 GLTATDTGVLCGAYRRACRRKYLAEPIRGELCHEAGLRILIGTIVRYAAKYDLGVEVLLA 221
Query: 284 VQMDFYVRVFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPG 343
D Y RVF+R+ + A + L Y++Q G+ ++ +LPG
Sbjct: 222 YYRDHYFRVFLRLRSGAKKADESVELLGYLWQ---------DETGKFKYERD----FLPG 268
Query: 344 FGPVVPQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTI 403
K GP+W G + +Q ++ ++ K+ ++ ++ + L+ +
Sbjct: 269 --------------KRGAYGPMWLGPLKNQAFLEELVRLTKTSEESI-SHRKTFQFLSLL 313
Query: 404 SEELPDVPLFLSLHNLC--STLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMG 461
EEL DVP H L + L+ S V+ + + G+ + TH +P +KT+AP
Sbjct: 314 VEEL-DVPFHYDTHALARKNGLEVVKISRVI--ETLHSLGFEATRTHFSPTSIKTNAPFD 370
Query: 462 VIWDIMR 468
V+ MR
Sbjct: 371 VVLRSMR 377
>sp|Q8PU28|TRM1_METMA tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=trm1 PE=3 SV=1
Length = 388
Score = 149 bits (377), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 173/358 (48%), Gaps = 33/358 (9%)
Query: 112 TERNVLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGS 171
+++++LR+ R ++A SASG+R LR A EV GI + D + E + NIK NG
Sbjct: 57 SKKDILRE--EIRYVDAFSASGIRGLRIAGEV-GIHSTMN-DWSHEAFELIKENIKINGL 112
Query: 172 VACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMA 231
K ++ +A V L H + F +VD+DP+G+PS +LD+A S ML TATD A
Sbjct: 113 E--EKAQATRRNANV--LLHEQRFHIVDVDPFGTPSPYLDAAASSAYS--MLSVTATDTA 166
Query: 232 VLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVR 291
LCG + KY S PL +Y EM LR+LL ++++ + P+LS YVR
Sbjct: 167 PLCGAHLNSGIRKYASVPLNTEYHSEMGLRVLLGACARELAKHEKGMLPLLSHVTRHYVR 226
Query: 292 VFVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQL 351
++ + + T + +V C C +PV G + +
Sbjct: 227 TYLEVLPGSRKADKTLKSMGFVAHCPRCG--FRKPVY--------------GLAVHIEKE 270
Query: 352 CSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYP--AYDRISAVLTTISEELPD 409
C +CG + GP+W G + E+ N ++ E+++ +P +++ ++T +EL D
Sbjct: 271 CPECGGLTKIAGPLWLGPYREPEFCNEVISELEA----HPLNTKEKVRKIITFCRDEL-D 325
Query: 410 VPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIM 467
+P+F H +C L ++ A+ G+ S TH KTDAP+ I I+
Sbjct: 326 IPMFYDQHVICKELGASATGIESLIEALRAGGFEASRTHFTGTSFKTDAPIAEIKKII 383
>sp|Q466T6|TRM1_METBF tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanosarcina
barkeri (strain Fusaro / DSM 804) GN=trm1 PE=3 SV=1
Length = 388
Score = 146 bits (369), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/355 (29%), Positives = 168/355 (47%), Gaps = 47/355 (13%)
Query: 124 RVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD 183
R ++A SASG+R LR A EV GI + D + E + N K NG E+ LA
Sbjct: 67 RYVDAFSASGIRGLRIAGEV-GIHATMN-DWSPEAFELIKENSKING-----LEENTLAT 119
Query: 184 AR-VYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCY 242
+ +L H +++ +VD+DP+G+P+ FLD+A SV GML TATD A LCG + +
Sbjct: 120 RKSANVLLHEQKYHIVDIDPFGTPAPFLDAASASVR--GMLSVTATDTAPLCGAHLKAGI 177
Query: 243 SKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASA 302
KY S PL +Y EM LR+LL ++++ + P+LS YVR ++ +
Sbjct: 178 RKYASVPLNTEYHSEMGLRVLLGACARELAKHEKGMLPLLSHVTRHYVRTYLEVLPGTKQ 237
Query: 303 MKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGF-GPV------VPQLCSDC 355
T + + C C GF GPV + + C C
Sbjct: 238 TDRTLKSMGFSIHCPKC-----------------------GFRGPVYGLAVHIEKECPVC 274
Query: 356 GKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYP--AYDRISAVLTTISEELPDVPLF 413
G + GP+W G +Q + + ++ E+ + +P D+ ++T +EL D+P+F
Sbjct: 275 GSFTQIAGPLWLGPFREQAFCDEVISEL----EMHPLNTKDKAKKIITFCRDEL-DIPMF 329
Query: 414 LSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
H +C L ++ + A+ G+ S TH + +TDAP+ I +I+R
Sbjct: 330 YDQHVICKELGASATGIEILIEALKAHGFEASRTHFSGTSFRTDAPITEIKEIIR 384
>sp|Q2FN43|TRM1_METHJ tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=trm1 PE=3 SV=1
Length = 370
Score = 145 bits (367), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 171/355 (48%), Gaps = 36/355 (10%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNG---SV 172
V+RQ P L+A++ASG+R R E G+ V D D+ +++ N++ G +
Sbjct: 47 VVRQTHPHSYLDAMAASGIRGCRVGYET-GV-PVTFNDRDQLAIDLITHNVQSLGIKADI 104
Query: 173 ACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAV 232
C S ++D ++F VDLDP+G+P+ F+D+AI+S G L TATD A
Sbjct: 105 TCRDANSLMSD---------EKFGFVDLDPFGTPAPFIDAAIRS--SGKYLGVTATDTAP 153
Query: 233 LCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRV 292
LCG + + +Y + PL +Y E+ LRILL + HA Y + I P+ + +VR+
Sbjct: 154 LCGAHLKAGIRRYMARPLNTEYHTEVGLRILLGNVARHAAVYDKGITPLFCYAHEHFVRL 213
Query: 293 FVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLC 352
+++ +SASA + +L Y++QC C + L+ ++ PG C
Sbjct: 214 HLQLKSSASAADKSIARLGYIHQCPKC-PYRLE-----------EQKFFPGI-----HTC 256
Query: 353 SDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPL 412
CG GP+W+G HD + ++ + ++ P+ + +L +E PD+
Sbjct: 257 PLCGASLTPTGPLWTGSTHDPNILAGMIEDAETFIAGDPS--GLLKLLALCRDE-PDISF 313
Query: 413 FLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIM 467
H L + + + + + + GYR H + G+KTDAP+ I D +
Sbjct: 314 SYDYHKLGKFYRLSPGPIDVLLNRLRDKGYRAGRVHYSGYGIKTDAPLEEIRDCI 368
>sp|Q3IUJ2|TRM1_NATPD tRNA (guanine(26)-N(2))-dimethyltransferase OS=Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678) GN=trm1 PE=3
SV=1
Length = 366
Score = 143 bits (360), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/343 (31%), Positives = 159/343 (46%), Gaps = 41/343 (11%)
Query: 126 LEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNG---SVACSKVESHLA 182
L+A++ASG+R++R A G V A D D +V RRN+ NG +V V +H+
Sbjct: 55 LDAMAASGIRSVRAA--AAGY-DVTACDIDDDAVALTRRNLDRNGVDGTVHHRNVNAHM- 110
Query: 183 DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCY 242
H DVVDLDP+G+P F D+A++S G L TATD A LCG + E
Sbjct: 111 --------HESAHDVVDLDPFGTPMAFADAAVRSA--GEYLCVTATDTAPLCGAHFESGV 160
Query: 243 SKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASA 302
Y + P ++ EM LR+LL+ + A R+ EPVLS YVR ++R+ + A A
Sbjct: 161 RSYDAVPRNTEFHAEMGLRVLLSALVRTAARHDIAAEPVLSHVTSHYVRTYLRVDSGARA 220
Query: 303 MKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMG 362
+ L Y+ C C + GR P C CG+
Sbjct: 221 ADALLEHLGYIDHCQRC-LWRDHERGRV---------------PDPTTTCPHCGQSTWTA 264
Query: 363 GPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCST 422
GP+W G HD +V+ + G ++ D + D+ +L+T++ EL P H L
Sbjct: 265 GPVWLGPAHDAAFVDDVAG---AIPDSFGTADKARDLLSTVATELHQ-PTHYDQHKLYK- 319
Query: 423 LKCTSPSAVM--FRSAVINAGYRVSGTHVNPLGLKTDAPMGVI 463
+ P+ M F +A+ AG+ S TH KTDA + I
Sbjct: 320 -RWNEPNIAMDDFLAALRAAGHEASRTHYGGTTFKTDADVADI 361
>sp|Q58356|TRM1_METJA tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=trm1 PE=3 SV=1
Length = 374
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 174/351 (49%), Gaps = 42/351 (11%)
Query: 125 VLEALSASGLRALRYAREVEGIGQVVALDND--KASVEACRRNIKFNGSVACSKVESHLA 182
+ +AL+ SG+R LRYA+E+E G++ ND + E N K N ++
Sbjct: 56 IADALAGSGIRGLRYAKELEFNGELKVFLNDINPKAYEKIINNAKLN---EIENIDVFNE 112
Query: 183 DARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQS-VADGGMLMCTATDMAVLCGGNGEVC 241
DA ++ H + F+VVD+DP+GSP+ +++ AI++ V G+L TATD A LCG + + C
Sbjct: 113 DANTFLSKHFRFFNVVDIDPFGSPAPYVEQAIRALVTRNGLLCLTATDTAALCGRSKKSC 172
Query: 242 YSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSAS 301
KY +YPL G+ CHE ALR+L+ + A +Y+ ++PV D YVRV+ + T
Sbjct: 173 LRKYLAYPLFGRDCHEFALRVLVGYVMRMATKYELALKPVFCHATDHYVRVY--LVTDRG 230
Query: 302 AMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNM 361
A ++ V++ +G +++ V N ++ + F + G +
Sbjct: 231 AKRADK-----VFEMLG----YVKDV--------NGIKIIKKF---------EEGYEKGF 264
Query: 362 GGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEE--LPDVPLFLSLHNL 419
GP++ G ++D+ V L + ++ +R+ +L I E + V + H +
Sbjct: 265 AGPLYIGNLYDKALVEEAL----KIAEKREFSERVLKILNAIKGESAINQVGCY-DTHQI 319
Query: 420 CSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPM-GVIWDIMRC 469
LK + P + + G+ TH NP G+KTDA + VI I +C
Sbjct: 320 GKMLKISVPPMQDIINKLKEMGFNAVVTHYNPKGIKTDATLKNVIEAIYQC 370
Score = 36.6 bits (83), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 21/119 (17%)
Query: 9 IIKEGEA------EILMHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSK--- 59
I+KEGE ++ + K+EVFYN RDISIAV++AF++ ++ + ++
Sbjct: 2 ILKEGEVVFEVPDKLTVTKKDEVFYNPRMKTCRDISIAVIQAFLNLYHKRDKFYIADALA 61
Query: 60 ----RTTSAPKASEKDGEEEA--------PDESVVNENSNGEIERPAEISQDEPCCISE 106
R K E +GE + E ++N EIE ++D +S+
Sbjct: 62 GSGIRGLRYAKELEFNGELKVFLNDINPKAYEKIINNAKLNEIENIDVFNEDANTFLSK 120
>sp|Q8TGX6|TRM1_METAC tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanosarcina
acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 /
C2A) GN=trm1 PE=3 SV=1
Length = 388
Score = 142 bits (359), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/354 (29%), Positives = 167/354 (47%), Gaps = 45/354 (12%)
Query: 124 RVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD 183
R ++A SASG+R LR A EV GI + D + + E + NIK NG K ++ +
Sbjct: 67 RYVDAFSASGIRGLRIAGEV-GIHSTMN-DWNPEAFELIKENIKINGLE--EKAQATRKN 122
Query: 184 ARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYS 243
A V L H ++F +VD+DP+G+P+ +LD+A + A GML TATD A LCG +
Sbjct: 123 ANV--LLHEQKFHIVDVDPFGTPAPYLDAA--ATAAQGMLSVTATDTAPLCGAHLNSGIR 178
Query: 244 KYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAM 303
KY + PL +Y EM LR+LL ++++ + P+LS YVR ++ +
Sbjct: 179 KYAAVPLNTEYHSEMGLRVLLGACARECAKHEKGMLPLLSHVTRHYVRSYLEVLPGTKHA 238
Query: 304 KSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGF-GPV------VPQLCSDCG 356
+ + C C GF GPV + + C CG
Sbjct: 239 DRALKSMGFSIYCPKC-----------------------GFRGPVYGLAVHIEKECPACG 275
Query: 357 KKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYP--AYDRISAVLTTISEELPDVPLFL 414
+ GP+W G + ++ N +L E+++ +P ++ ++T +EL D+P+F
Sbjct: 276 ALTKIAGPLWLGPFREPKFCNEVLSELEA----HPLNTKEKAKKIITFCRDEL-DIPMFY 330
Query: 415 SLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
H +C L ++ A+ G+ S TH + +TDAP+ I I++
Sbjct: 331 DQHVICKELGASATGIETLIEALKAGGFEASRTHFSGTSFRTDAPIAEIKKIIQ 384
>sp|A7I9E9|TRM1_METB6 tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanoregula boonei
(strain 6A8) GN=trm1 PE=3 SV=1
Length = 374
Score = 142 bits (358), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 115/368 (31%), Positives = 171/368 (46%), Gaps = 48/368 (13%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNG---SV 172
+L L+P L+A+ A+G+R LR A EV GI V D D ++ R N+ G +V
Sbjct: 47 LLSVLQPSDYLDAMGATGVRGLRVAHEV-GI-PVTINDRDPEAIPLIRENVARLGLPVTV 104
Query: 173 ACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAV 232
C S L + + FD VD+DP+G+P+ F D+ I+ L+ TATD A
Sbjct: 105 TCRDACSLLFE---------QAFDAVDIDPFGTPAPFTDAGIRGTRR--FLLLTATDTAP 153
Query: 233 LCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRV 292
LCG + + +Y + P Y E+ LRILL + +Y R IEP+ + +VR+
Sbjct: 154 LCGAHLKAGIRRYFARPGNTGYHGEVGLRILLGFVARETVKYDRGIEPLFCFAREHFVRL 213
Query: 293 FVRIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLC 352
+R+ A T +L ++ QC C A + LPG P C
Sbjct: 214 NLRLTRGPKAADRTIERLGFILQCPTC-----------AYREE-----LPGMFPPA-ATC 256
Query: 353 SDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPA-----YDRISAVLTTISEEL 407
CGK GP++ G I E ILG+ M+ R P+ + +LTT EEL
Sbjct: 257 PFCGKPLRPIGPLFLGAISSDE----ILGQ---MQARLPSCGLGTQKELEKLLTTCREEL 309
Query: 408 PDVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIM 467
P + H + L + P A+ +AG+ S TH + G+KT+AP+ V++D +
Sbjct: 310 PTSSHY-DYHRVAQQLVVSPPKIETLLEALRSAGFDASRTHYSGTGVKTNAPLPVLYDAI 368
Query: 468 RCWVKNHP 475
R KN P
Sbjct: 369 RG--KNEP 374
>sp|A6VIL5|TRM1_METM7 tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=trm1 PE=3
SV=1
Length = 373
Score = 140 bits (352), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 181/398 (45%), Gaps = 49/398 (12%)
Query: 68 SEKDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLE 127
SE + + P+ES +++ E ++D + + + +R+ P
Sbjct: 5 SEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDNFKRDEFLMCDP----- 59
Query: 128 ALSASGLRALRYAREVEGIGQV-VAL-DNDKASVEACRRNIKFNGSVACSKVESHLADAR 185
L SG R +RYA E++ G++ V++ D + ++V+ + N+K N VE DA
Sbjct: 60 -LGGSGARGIRYANELKFNGELKVSIGDINPSAVKMIKENLKLN---ELENVEVFHEDAN 115
Query: 186 VYMLTHPKEFDVVDLDPYGSPSVFLDSAIQ-SVADGGMLMCTATDMAVLCGGNGEVCYSK 244
V + + K F+VVDLDP+GSP +LDS I+ S+ GG+L TATD AVLCG + C K
Sbjct: 116 VLLSKNFKIFNVVDLDPFGSPVPYLDSGIRASLTKGGLLCMTATDTAVLCGAYRKTCIRK 175
Query: 245 YGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMK 304
Y + PL+G E+A+R+++ A++Y ++P+ S D Y R F+ A
Sbjct: 176 YNAIPLKGD--KELAVRLMIGYAVKMASKYDIGLKPIFSHVTDHYARTFMVTERGAGKAD 233
Query: 305 STPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGP 364
S L Y+ Q SF G Y G+ GP
Sbjct: 234 SAIENLGYIRQDSEQKSFKTFEEG-----------YEKGY-----------------AGP 265
Query: 365 IWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEE--LPDVPLFLSLHNLCST 422
+ G I D+ V + L K+ A D +L IS+E + V F +H LCS
Sbjct: 266 FYLGEISDKNIVQNSLETAKNRNYSKRAID----ILELISKESKIEQVGCF-DIHELCSF 320
Query: 423 LKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPM 460
+K P + G++VS H NP GLKTDA +
Sbjct: 321 IKKLVPPVNDIMENLKENGFKVSRVHYNPYGLKTDAEL 358
Score = 36.6 bits (83), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 9 IIKEGEAEIL------MHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAM 56
II EGE +++ + K+ VFYN NRDIS++V+++F+ ++ M
Sbjct: 3 IISEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDNFKRDEFLM 56
>sp|P0CW65|TRM1_METMP tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanococcus
maripaludis (strain S2 / LL) GN=trm1 PE=3 SV=1
Length = 373
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 176/398 (44%), Gaps = 49/398 (12%)
Query: 68 SEKDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLE 127
SE + + P+ES +++ E ++D + + + +R+ P
Sbjct: 5 SEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDDFKRDEFLMCDP----- 59
Query: 128 ALSASGLRALRYAREVEGIG--QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR 185
L SG R +RYA+E++ G +V D + ++V+ + N+K N VE DA
Sbjct: 60 -LGGSGARGIRYAKELKFNGDLKVSIGDINPSAVKMIKENLKLN---ELENVEVFHEDAN 115
Query: 186 VYMLTHPKEFDVVDLDPYGSPSVFLDSAIQ-SVADGGMLMCTATDMAVLCGGNGEVCYSK 244
V + + K F+VVDLDP+GSP +LDS I+ S+ GG+L TATD AVLCG + C K
Sbjct: 116 VLLSKNFKVFNVVDLDPFGSPVPYLDSGIRASLTKGGLLCMTATDTAVLCGAYRKTCIRK 175
Query: 245 YGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMK 304
Y + PL+G E+A+R+++ A++Y ++P+ S D Y R F+ A
Sbjct: 176 YNAVPLKGD--KELAVRLMIGYAVKMASKYDIGLKPIFSHVTDHYARTFMVTERGAGKAD 233
Query: 305 STPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGP 364
S L Y+ Q SF + G + GP
Sbjct: 234 SAIENLGYIRQDSEQKSFK----------------------------TFEEGSEKGYAGP 265
Query: 365 IWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISE--ELPDVPLFLSLHNLCST 422
+ G I D+ V + L K+ R +L IS E+ V F +H LCS
Sbjct: 266 FYLGEISDKNIVQNALNTAKTRN----YSKRAVNILEMISRESEINQVGCF-DIHELCSF 320
Query: 423 LKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPM 460
+K P + G++V+ H NP GLKTDA +
Sbjct: 321 IKKLVPPVNDIMENLKENGFKVTRVHYNPYGLKTDAEL 358
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 9 IIKEGEAEIL------MHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAM 56
II EGE +++ + K+ VFYN NRDIS++V+++F+ ++ M
Sbjct: 3 IISEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDDFKRDEFLM 56
>sp|P0CW64|TRM1_METMI tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanococcus
maripaludis GN=trm1 PE=3 SV=1
Length = 373
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 176/398 (44%), Gaps = 49/398 (12%)
Query: 68 SEKDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLE 127
SE + + P+ES +++ E ++D + + + +R+ P
Sbjct: 5 SEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDDFKRDEFLMCDP----- 59
Query: 128 ALSASGLRALRYAREVEGIG--QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR 185
L SG R +RYA+E++ G +V D + ++V+ + N+K N VE DA
Sbjct: 60 -LGGSGARGIRYAKELKFNGDLKVSIGDINPSAVKMIKENLKLN---ELENVEVFHEDAN 115
Query: 186 VYMLTHPKEFDVVDLDPYGSPSVFLDSAIQ-SVADGGMLMCTATDMAVLCGGNGEVCYSK 244
V + + K F+VVDLDP+GSP +LDS I+ S+ GG+L TATD AVLCG + C K
Sbjct: 116 VLLSKNFKVFNVVDLDPFGSPVPYLDSGIRASLTKGGLLCMTATDTAVLCGAYRKTCIRK 175
Query: 245 YGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMK 304
Y + PL+G E+A+R+++ A++Y ++P+ S D Y R F+ A
Sbjct: 176 YNAVPLKGD--KELAVRLMIGYAVKMASKYDIGLKPIFSHVTDHYARTFMVTERGAGKAD 233
Query: 305 STPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGP 364
S L Y+ Q SF + G + GP
Sbjct: 234 SAIENLGYIRQDSEQKSFK----------------------------TFEEGSEKGYAGP 265
Query: 365 IWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISE--ELPDVPLFLSLHNLCST 422
+ G I D+ V + L K+ R +L IS E+ V F +H LCS
Sbjct: 266 FYLGEISDKNIVQNALNTAKTRN----YSKRAVNILEMISRESEINQVGCF-DIHELCSF 320
Query: 423 LKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPM 460
+K P + G++V+ H NP GLKTDA +
Sbjct: 321 IKKLVPPVNDIMENLKENGFKVTRVHYNPYGLKTDAEL 358
Score = 36.2 bits (82), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 9 IIKEGEAEIL------MHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAM 56
II EGE +++ + K+ VFYN NRDIS++V+++F+ ++ M
Sbjct: 3 IISEGETKLMVPEESTLSKKDTVFYNPVMETNRDISVSVVQSFLDDFKRDEFLM 56
>sp|A4FZY5|TRM1_METM5 tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=trm1 PE=3
SV=1
Length = 373
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 107/335 (31%), Positives = 154/335 (45%), Gaps = 39/335 (11%)
Query: 129 LSASGLRALRYAREVEGIG--QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV 186
L SG R +RYA E+E G +V D + ++V+ + N+K N VE DA V
Sbjct: 60 LGGSGARGIRYANELEFNGDLKVSIGDINPSAVKMIKENLKLN---ELENVEVFHEDANV 116
Query: 187 YMLTHPKEFDVVDLDPYGSPSVFLDSAIQ-SVADGGMLMCTATDMAVLCGGNGEVCYSKY 245
+ + K F+VVDLDP+GSP +LDS I+ S+ GG+L TATD AVLCG + C KY
Sbjct: 117 LLSKNFKVFNVVDLDPFGSPVPYLDSGIRASLTKGGLLCMTATDTAVLCGAYRKTCIRKY 176
Query: 246 GSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMKS 305
+ PL+G E+A+R+++ A++Y ++P+ S D Y R F+ A S
Sbjct: 177 NAIPLKGD--KELAVRLMIGYAVKMASKYDIGLKPIFSHVTDHYARTFMVTERGAGKADS 234
Query: 306 TPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGPI 365
L Y+ Q SF G Y G+ G
Sbjct: 235 AIENLGYIRQDSEQKSFKAFEEG-----------YEKGY-----------------AGSF 266
Query: 366 WSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCSTLKC 425
+ G I D++ V + L K+ A D + L + E+ V F +H LCS +K
Sbjct: 267 YLGEISDKDIVQNSLETAKNRNYSKRAVDILE--LISKESEIEQVGCF-DIHELCSFIKK 323
Query: 426 TSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPM 460
P + G++VS H NP GLKTDA +
Sbjct: 324 LVPPVNDIMDNLKENGFKVSRVHYNPYGLKTDAEL 358
Score = 34.7 bits (78), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 6/54 (11%)
Query: 9 IIKEGEAEIL------MHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAM 56
II EGE +++ + K+ VFYN NR+IS++V+++F+ ++ M
Sbjct: 3 IISEGETKLMVPEESTLSKKDTVFYNPVMETNRNISVSVVQSFLDNFKRDEFLM 56
>sp|A9A871|TRM1_METM6 tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=trm1 PE=3
SV=1
Length = 373
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 177/398 (44%), Gaps = 49/398 (12%)
Query: 68 SEKDGEEEAPDESVVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLE 127
SE + + P+ES +++ E ++D + + + R+ P
Sbjct: 5 SEGETKLMVPEESTLSKKDTVFYNPMMETNRDISVSVVQSFLDNFNRDEFLMCDP----- 59
Query: 128 ALSASGLRALRYAREVEGIG--QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR 185
L SG R +RYA E++ G +V D + ++V+ + N+K N VE DA
Sbjct: 60 -LGGSGARGIRYANELKFNGDLKVSIGDINPSAVKMIKENLKLN---ELENVEVFHEDAN 115
Query: 186 VYMLTHPKEFDVVDLDPYGSPSVFLDSAIQ-SVADGGMLMCTATDMAVLCGGNGEVCYSK 244
V + + K F+VVDLDP+GSP +LDS I+ S+ GG+L TATD AVLCG + C K
Sbjct: 116 VLLSKNFKIFNVVDLDPFGSPVPYLDSGIRASLTKGGLLCMTATDTAVLCGAYRKTCIRK 175
Query: 245 YGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMK 304
Y + PL+G E+A+R+++ A++Y ++P+ S D Y R F+ A
Sbjct: 176 YNAIPLKGD--KELAVRLMIGYAVKMASKYDIGLKPIFSHVTDHYARTFMVTERGAGKAD 233
Query: 305 STPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGP 364
S L Y+ Q SF G Y G+ GP
Sbjct: 234 SAIENLGYIRQDSEQKSFKSFEEG-----------YEKGY-----------------TGP 265
Query: 365 IWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEE--LPDVPLFLSLHNLCST 422
+ G I D + V + L K+ A D +L IS+E + V F +H LCS
Sbjct: 266 FYLGEISDNDIVQNSLETAKNRNYSKRAVD----ILELISKESKIEQVGCF-DIHELCSF 320
Query: 423 LKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPM 460
+K P + G++VS H NP GLKTDA +
Sbjct: 321 IKKLVPPVNDIMKNLKENGFKVSRVHYNPYGLKTDAEL 358
Score = 38.9 bits (89), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
Query: 9 IIKEGEAEIL------MHAKNEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAM 56
II EGE +++ + K+ VFYN NRDIS++V+++F+ N++ M
Sbjct: 3 IISEGETKLMVPEESTLSKKDTVFYNPMMETNRDISVSVVQSFLDNFNRDEFLM 56
>sp|Q5UYV8|TRM1_HALMA tRNA (guanine(26)-N(2))-dimethyltransferase OS=Haloarcula
marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 /
VKM B-1809) GN=trm1 PE=3 SV=1
Length = 367
Score = 136 bits (343), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 150/341 (43%), Gaps = 34/341 (9%)
Query: 121 KPPRV---LEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV 177
+ PRV L+A +ASG+R +R A + D D + C +N++ N A +
Sbjct: 47 RTPRVSTYLDATAASGIRGVRAA---ANDWETTLCDIDDDATALCEQNLERNDLAASVR- 102
Query: 178 ESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGN 237
+DA V M H + FDVVD+DP+G+P F D+A+Q +L TATD A LCG +
Sbjct: 103 ---RSDANVLM--HSEAFDVVDVDPFGTPIPFADAAVQGTKH--LLCVTATDTAPLCGAH 155
Query: 238 GEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIY 297
E YG+ P ++ EM +R+LL+ + A RY P+LS Y R ++
Sbjct: 156 FESGVRSYGAVPRNTEFHAEMGMRVLLSAMVRTAARYDIAARPILSHATKHYARTYLEFD 215
Query: 298 TSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGK 357
A +L YV+ C C + G A P+ C C K
Sbjct: 216 HGAKVANDCIDELGYVHHCQHC-LWRDHDYGLIADP---------------PEDCPVCEK 259
Query: 358 KFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSLH 417
GPIW GR D E+V+++ +V + D +L T+ E+ D P H
Sbjct: 260 HLQTAGPIWLGRTCDPEFVSAVSEQV---SEEMGTADEAKELLATLGAEI-DTPTHYDQH 315
Query: 418 NLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDA 458
LC + + F + +AGY S TH KTDA
Sbjct: 316 RLCKRWGRGAEAMDEFIEKLRDAGYAASRTHYGGTTFKTDA 356
>sp|Q4J947|TRM1_SULAC tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
acidocaldarius (strain ATCC 33909 / DSM 639 / JCM 8929 /
NBRC 15157 / NCIMB 11770) GN=trm1 PE=3 SV=1
Length = 382
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 167/353 (47%), Gaps = 36/353 (10%)
Query: 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVES 179
+KP +++ LSA+G+R +RY E+ G+ +++ D D +VE ++N+K N + +K+ +
Sbjct: 54 VKPKSLIDGLSATGVRGIRYGLEINGVEEIILNDIDSDAVELIKKNVKINDLESRAKIYN 113
Query: 180 HLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGE 239
+ ++ L H + D VD+DP+GSP+ FL S+ + + TATD+A L +
Sbjct: 114 NNINS----LLHEIKVDYVDIDPFGSPAPFLLSSFSAAKSKQYVAITATDLAALMCSSKT 169
Query: 240 VCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTS 299
KYG + + E+ LR L++ + A ++ + PV S D+Y RV ++
Sbjct: 170 SARRKYGLICNKMSFSRELGLRGLISKAITEAAVVEKAVTPVFSFYNDYYYRVIFKVERG 229
Query: 300 ASAMKSTPLKLSYVYQCIGC----DSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDC 355
A + KL Y Y+C C +S +LQ + C++C
Sbjct: 230 AKKVDRQLSKLVYYYECPKCGYRIESEYLQQMK-----------------------CTNC 266
Query: 356 GKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLS 415
GP + + D E++N+++ E+ + + ++ ++L TI +E +
Sbjct: 267 NLVMQTYGPAYKESLVDYEFLNNMISELDKF-SYFQTFSKLKSILLTIKDESKYSENYYR 325
Query: 416 LHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
+ L S + P R VIN S TH++PLG+KT + I + ++
Sbjct: 326 IDFLASLARVNVPR----RDNVINCLVDASRTHLDPLGVKTSKNLDEIKECIK 374
>sp|A3CW75|TRM1_METMJ tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=trm1
PE=3 SV=1
Length = 371
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/352 (30%), Positives = 166/352 (47%), Gaps = 30/352 (8%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
+L L+P L+A+ ASG+R LR A EV GI + N KA V+ R+N++ G VA
Sbjct: 47 LLSVLRPESYLDAMGASGVRGLRVAHEV-GIPVTINDWNAKA-VDLARQNVEALGLVA-- 102
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
E DA V M + FD VDLDP+G+P+ F+DSA +S G L TATD A LCG
Sbjct: 103 --EVTHGDANVLM--SGRTFDAVDLDPFGTPAPFVDSAARSA--GNYLFVTATDTAPLCG 156
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ + +Y S P +Y E+ LR L+ + +Y R +EP+ + + R+ +R
Sbjct: 157 AHLKAGMRRYFSRPRNTEYHAEVGLRTLMGFVVREVIKYDRGVEPLFCYAHEHFHRLHLR 216
Query: 296 IYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDC 355
+ A+A ++ YV QC C ++ LP P+ C C
Sbjct: 217 LRYGAAAADRALARIGYVMQCPNC------------LYRSEQTGMLPE-----PEECPLC 259
Query: 356 GKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLS 415
GP+W+G I+D + ++ + S+ A RI +L T +EL D
Sbjct: 260 SAALVPVGPLWTGGINDDATLAAMQEALPSVTAGTGA--RIGRLLATCRQEL-DTSSHYD 316
Query: 416 LHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIM 467
H + L+ + ++ GYR S H + LKTDAP+ V+ ++
Sbjct: 317 YHVIAKRLRVSPGRIETVIERLVALGYRASRAHYSGTALKTDAPLPVLEKVV 368
>sp|B8GF12|TRM1_METPE tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanosphaerula
palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c)
GN=trm1 PE=3 SV=1
Length = 371
Score = 134 bits (337), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/355 (30%), Positives = 158/355 (44%), Gaps = 44/355 (12%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
+L L P L+ + ASG+R LR A E VV D D A+ + R N+ G
Sbjct: 47 LLSVLNPEEYLDTMGASGVRGLRVAGECRI--PVVINDRDPAAADLIRANLAGAGLEGRV 104
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
VE DA V L + FD VDLDP+GSP+ F D+A +S L TATD A LCG
Sbjct: 105 TVE----DANV--LLSRERFDAVDLDPFGSPAPFTDAACRSAKR--YLFVTATDTAPLCG 156
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ + +Y + PL +Y E+ LRILL + +Y R + P+ ++R+ ++
Sbjct: 157 AHLKAGIRRYATKPLNTEYHAEVGLRILLGYVARTMVKYDRGLSPLFCFASAHFLRLHLQ 216
Query: 296 IYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVP--QLCS 353
A A T +L ++Y C C RT PG V+P +C
Sbjct: 217 AEKGADAADRTVARLGFLYHCPSCPE-------RTEE---------PG---VLPHDHVCP 257
Query: 354 DCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYD-----RISAVLTTISEELP 408
CG GP+W G + D ++ MK+R P R+ +L + ELP
Sbjct: 258 RCGTTMLPIGPLWLGSLSDMALLD-------QMKERLPDLSLSTERRLGKLLDVLKVELP 310
Query: 409 DVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVI 463
+ H + + + P+ + + +I GYR S H + LKTDAP+ I
Sbjct: 311 TSSHY-DYHRIAKWIGGSPPAIDVVIARLIQTGYRASRAHYSGTALKTDAPLDAI 364
>sp|A2SRK9|TRM1_METLZ tRNA (guanine(26)-N(2))-dimethyltransferase OS=Methanocorpusculum
labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=trm1
PE=3 SV=1
Length = 379
Score = 131 bits (330), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/355 (27%), Positives = 168/355 (47%), Gaps = 37/355 (10%)
Query: 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVES 179
++P L+A++A+G+R LR A E + V D D+ +V+ IK+N +
Sbjct: 51 VQPEDYLDAMAATGVRGLRIANEAKI--PVTINDRDEQAVKI----IKYNAEKLGGDISV 104
Query: 180 HLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGE 239
DA M T FD +DLDP+G+P FLD+A S A L TATD A LCG + +
Sbjct: 105 TCDDANRLMCT--SRFDSIDLDPFGTPVPFLDAA--SRAAKHYLFVTATDTAPLCGAHFK 160
Query: 240 VCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTS 299
+Y + P +Y E+ LR+++ + +Y R ++P+LS Y R VR+
Sbjct: 161 AGCRRYFATPRNTEYHAEVGLRMMMGTMARELVKYDRGMKPILSYAKSHYFRSHVRVLGK 220
Query: 300 ASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQL--CSDCGK 357
+A T ++ +V QC C Q G + P++ C CG
Sbjct: 221 VTAADETLAQIGFVMQCPKCLYREEQK------------------GSLYPKMHICPHCGV 262
Query: 358 KFNMGGPIWSGRIHDQEWVNSILGEVKS--MKDRYPAYDRISAVLTTISEELPDVPLFLS 415
+ GP+W G + ++E IL E+++ + ++ ++ +LT + E P+ +
Sbjct: 263 ETVPVGPLWMGPLQEKE----ILAEMQTALAELQFGTKRQMEKMLTFLLAE-PETCTYYD 317
Query: 416 LHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCW 470
H + +K + P+ +++ AGY + TH G+KT AP+ +I + +R W
Sbjct: 318 YHIISRNMKVSPPNMEELIASLNEAGYYTTRTHFCDTGIKTTAPLPLIEEKIRLW 372
>sp|C3MYQ9|TRM1_SULIM tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
islandicus (strain M.14.25 / Kamchatka #1) GN=trm1 PE=3
SV=1
Length = 378
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 173/359 (48%), Gaps = 40/359 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V+ LKP +L+ALSA+G+R +RY E Q++ D + + + N+K NG + +
Sbjct: 50 VVSLLKPKIILDALSATGIRGIRYYVESWKSEQLILNDKNSTAASLIQINVKNNG-IENA 108
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
K+ + A+A +Y + + +D+DP+GSP F+ S+I + G++ TATD++ L G
Sbjct: 109 KIYNKDANALLYEIKS----EYIDIDPFGSPVPFILSSINATIRNGIVAFTATDLSPLEG 164
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ C KY + + E+ LRIL+ I A ++ + P+ S D+Y R+FV
Sbjct: 165 SSRTSCRRKYDAINYKLSSSKELGLRILIGKIIREAATLEKTVHPLFSFYADYYYRLFVI 224
Query: 296 IYTSA-SAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
+ + A A ++ L Y +C C GF V + C
Sbjct: 225 VESGARKADENINKNLKYFGECPRC-----------------------GFQTFVDENCKT 261
Query: 355 ----CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CG+ F + GP++ G +H+ E++ ++ + S + +++RI +L I +E
Sbjct: 262 KCPICGENFIIIGPLYIGPLHNMEFLKRMI-DTYSDFNYLSSFNRIQKLLNVIEKEAKYK 320
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRC 469
+F ++ L S LK SA+ +++ S TH P G++TD +I+RC
Sbjct: 321 SVFYNISKLASKLKV---SAIPPIDSILECLGDASKTHFAPTGIRTDKGYE---EIIRC 373
>sp|C4KH07|TRM1_SULIK tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
islandicus (strain M.16.4 / Kamchatka #3) GN=trm1 PE=3
SV=1
Length = 378
Score = 130 bits (328), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 173/359 (48%), Gaps = 40/359 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V+ LKP +L+ALSA+G+R +RY E Q++ D + + + N+K NG + +
Sbjct: 50 VVSLLKPKIILDALSATGIRGIRYYVESWKSEQLILNDKNSTAASLIQINVKNNG-IENA 108
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
K+ + A+A +Y + + +D+DP+GSP F+ S+I + G++ TATD++ L G
Sbjct: 109 KIYNKDANALLYEIKS----EYIDIDPFGSPVPFILSSINATIRNGIVAFTATDLSPLEG 164
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ C KY + + E+ LRIL+ I A ++ + P+ S D+Y R+FV
Sbjct: 165 SSRTSCRRKYDAINYKLSSSKELGLRILIGKIIREAATLEKTVHPLFSFYADYYYRLFVI 224
Query: 296 IYTSA-SAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
+ + A A ++ L Y +C C GF V + C
Sbjct: 225 VESGARKADENINKNLKYFGECPRC-----------------------GFQTFVDENCKT 261
Query: 355 ----CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CG+ F + GP++ G +H+ E++ ++ + S + +++RI +L I +E
Sbjct: 262 KCPICGENFIIIGPLYIGPLHNMEFLKRMI-DTYSDFNYLSSFNRIQKLLNVIEKEAKYK 320
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRC 469
+F ++ L S LK SA+ +++ S TH P G++TD +I+RC
Sbjct: 321 SVFYNISKLASKLKV---SAIPPIDSILECLGDASKTHFAPTGIRTDKGYE---EIIRC 373
>sp|O67010|TRM1_AQUAE tRNA (guanine(26)-N(2)/guanine(27)-N(2))-dimethyltransferase
OS=Aquifex aeolicus (strain VF5) GN=trm1 PE=1 SV=1
Length = 392
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 138/290 (47%), Gaps = 28/290 (9%)
Query: 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESH 180
+P +V + LSASG+RA+R+ E + + A D ++E + N K N ++ + E H
Sbjct: 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN-NIPEDRYEIH 110
Query: 181 LADARVYMLTHPKE----FDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGG 236
+A ++ KE FD VDLDP+G+P F++S S+ GG+L TATD A L G
Sbjct: 111 GMEANFFL---RKEWGFGFDYVDLDPFGTPVPFIESVALSMKRGGILSLTATDTAPLSGT 167
Query: 237 NGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRI 296
+ C +Y + PLR ++ HE+ +RIL+ + A +Y + P+ + Y ++F
Sbjct: 168 YPKTCMRRYMARPLRNEFKHEVGIRILIKKVIELAAQYDIAMIPIFAYSHLHYFKLFFVK 227
Query: 297 YTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCG 356
+ + Y+ C C + R + + C CG
Sbjct: 228 ERGVEKVDKLIEQFGYIQYCFNC-------MNREVVTDLYKFK----------EKCPHCG 270
Query: 357 KKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEE 406
KF++GGP+W G++ D+E+ N + E + ++ RI L I EE
Sbjct: 271 SKFHIGGPLWIGKLWDEEFTNFLYEEAQKREEIEKETKRI---LKLIKEE 317
>sp|C3MPR5|TRM1_SULIL tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
islandicus (strain L.S.2.15 / Lassen #1) GN=trm1 PE=3
SV=1
Length = 378
Score = 130 bits (326), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/359 (27%), Positives = 173/359 (48%), Gaps = 40/359 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V+ LKP +L+ALSA+G+R +RY E Q++ D + + + N+K NG + +
Sbjct: 50 VVSLLKPKIILDALSATGIRGIRYYVESWKSEQLILNDKNSTAASLIQINVKNNG-IENA 108
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
K+ + A+A +Y + + +D+DP+GSP F+ S++ + G++ TATD++ L G
Sbjct: 109 KIYNKDANALLYEIKS----EYIDIDPFGSPVPFILSSVNATIRNGIVAFTATDLSPLEG 164
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ C KY + + E+ LRIL+ I A ++ + P+ S D+Y R+FV
Sbjct: 165 SSRTSCRRKYDAINYKLSSSKELGLRILIGKIIREAATLEKTVHPLFSFYADYYYRLFVI 224
Query: 296 IYTSA-SAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
+ + A A ++ L Y +C C GF V + C
Sbjct: 225 VESGARKADENINKNLKYFGECPRC-----------------------GFQTFVDENCKT 261
Query: 355 ----CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CG+ F + GP++ G +H+ E++ ++ + S + +++RI +L I +E
Sbjct: 262 KCPICGENFIIIGPLYIGPLHNMEFLKRMI-DTYSDFNYLSSFNRIQKLLNVIEKEAKYK 320
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRC 469
+F ++ L S LK SA+ +++ S TH P G++TD +I+RC
Sbjct: 321 SVFYNISKLASKLKV---SAIPPIDSILECLGDASKTHFAPTGIRTDKGYE---EIIRC 373
>sp|C3N5E1|TRM1_SULIA tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
islandicus (strain M.16.27) GN=trm1 PE=3 SV=1
Length = 378
Score = 129 bits (324), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 172/359 (47%), Gaps = 40/359 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V+ LKP +L+ALSA+G+R +RY E Q++ D + + + N+K NG + +
Sbjct: 50 VVSLLKPKIILDALSATGIRGIRYYVESWKSEQLILNDKNSTAASLIQINVKNNG-IENA 108
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
K+ + A+A +Y + + +D+DP+GSP F+ S+I + G+ TATD++ L G
Sbjct: 109 KIFNKDANALLYEIKS----EYIDIDPFGSPVPFILSSINATIRNGIAAFTATDLSPLEG 164
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ C KY + + E+ LRIL+ I A ++ + P+ S D+Y R+FV
Sbjct: 165 SSRTSCRRKYDAINYKLSSSKELGLRILIGKIIREAATLEKTVHPLFSFYADYYYRLFVI 224
Query: 296 IYTSA-SAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
+ + A A ++ L Y +C C GF V + C
Sbjct: 225 VESGARKADENINKNLKYFGECPRC-----------------------GFQTFVDENCKT 261
Query: 355 ----CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CG+ F + GP++ G +H+ E++ ++ + S + +++RI +L I +E
Sbjct: 262 KCPICGENFIIIGPLYIGPLHNMEFLKRMI-DTYSDFNYLSSFNRIQKLLNVIEKEAKYK 320
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRC 469
+F ++ L S LK SA+ +++ S TH P G++TD +I+RC
Sbjct: 321 SVFYNISKLASKLKV---SAIPPIDSILECLGDASKTHFAPTGIRTDKGYE---EIIRC 373
>sp|C3NDZ5|TRM1_SULIY tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
islandicus (strain Y.G.57.14 / Yellowstone #1) GN=trm1
PE=3 SV=1
Length = 378
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 172/359 (47%), Gaps = 40/359 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V+ LKP +L+ALSA+G+R +RY E Q++ D + + + N+K NG + +
Sbjct: 50 VVSLLKPKIILDALSATGIRGIRYYVESWKSEQLILNDKNSTAASLIQINVKNNG-IENA 108
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
K+ + A+A +Y + + +D+DP+GSP F+ S++ + G++ TATD++ L G
Sbjct: 109 KIYNKDANALLYEIKS----EYIDIDPFGSPVPFILSSVNATIRNGIVAFTATDLSPLEG 164
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ C KY + + E+ LRIL+ I A ++ + P+ S D+Y R+F
Sbjct: 165 SSRTSCRRKYDAINYKLSSSKELGLRILIGKIIREAATLEKTVHPLFSFYADYYYRLFAI 224
Query: 296 IYTSA-SAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
+ + A A ++ L Y +C C GF V + C
Sbjct: 225 VESGARKADENINKNLKYFGECPRC-----------------------GFQTFVDENCKT 261
Query: 355 ----CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CG+ F + GP++ G +H+ E++ ++ + S + +++RI +L I +E
Sbjct: 262 KCPICGENFIIIGPLYIGPLHNMEFLKRMI-DTYSDFNYLSSFNRIQKLLNVIEKEAKYK 320
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRC 469
+F ++ L S LK SA+ +++ S TH P G++TD +I+RC
Sbjct: 321 SVFYNISKLASKLKV---SAIPPIDSILECLGDASKTHFAPTGIRTDKGYE---EIIRC 373
>sp|C3NHQ8|TRM1_SULIN tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
islandicus (strain Y.N.15.51 / Yellowstone #2) GN=trm1
PE=3 SV=1
Length = 378
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 172/359 (47%), Gaps = 40/359 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V+ LKP +L+ALSA+G+R +RY E Q++ D + + + N+K NG + +
Sbjct: 50 VVSLLKPKIILDALSATGIRGIRYYVESWKSEQLILNDKNSTAASLIQINVKNNG-IENA 108
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
K+ + A+A +Y + + +D+DP+GSP F+ S++ + G++ TATD++ L G
Sbjct: 109 KIYNKDANALLYEIKS----EYIDIDPFGSPVPFILSSVNATIRNGIVAFTATDLSPLEG 164
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ C KY + + E+ LRIL+ I A ++ + P+ S D+Y R+F
Sbjct: 165 SSRTSCRRKYDAINYKLSSSKELGLRILIGKIIREAATLEKTVHPLFSFYADYYYRLFAI 224
Query: 296 IYTSA-SAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
+ + A A ++ L Y +C C GF V + C
Sbjct: 225 VESGARKADENINKNLKYFGECPRC-----------------------GFQTFVDENCKT 261
Query: 355 ----CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CG+ F + GP++ G +H+ E++ ++ + S + +++RI +L I +E
Sbjct: 262 KCPICGENFIIIGPLYIGPLHNMEFLKRMI-DTYSDFNYLSSFNRIQKLLNVIEKEAKYK 320
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRC 469
+F ++ L S LK SA+ +++ S TH P G++TD +I+RC
Sbjct: 321 SVFYNISKLASKLKV---SAIPPIDSILECLGDASKTHFAPTGIRTDKGYE---EIIRC 373
>sp|A4YHH9|TRM1_METS5 tRNA (guanine(26)-N(2))-dimethyltransferase OS=Metallosphaera
sedula (strain ATCC 51363 / DSM 5348) GN=trm1 PE=3 SV=1
Length = 382
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 156/343 (45%), Gaps = 43/343 (12%)
Query: 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVES 179
+ PP VL+A+SA+G+R +RY +E G+V+ D + SVE +N++ NG KV
Sbjct: 54 ISPPSVLDAMSATGVRGIRYVKESGVKGEVLFNDKNPVSVELISKNLELNG--ITGKVLR 111
Query: 180 HLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGE 239
A++ L H + DLDP+GSP+ +L SAI S+ G+L TATD++ L G +
Sbjct: 112 SDANS----LMHQVKVGYTDLDPFGSPAPYLFSAISSLRRKGVLGVTATDLSALEGKSRT 167
Query: 240 VCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTS 299
KYG R Y E LR+LL I A+ ++ I P++ D+Y R+FV++
Sbjct: 168 SSKRKYGVQGSRLSYSKEAGLRVLLGKIVKEASVQEKGIRPLMGFYHDYYYRLFVKMEDG 227
Query: 300 ASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKF 359
A + L +Y+C C G + + + R C CG +
Sbjct: 228 AKRADRSLESLGTLYECDRC--------GYSFMSSDECERK-----------CPVCGGEL 268
Query: 360 NMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYD------RISAVLTTISEELPDVPLF 413
GP W G +D E+ +K MK+R + +IS +L + E P +
Sbjct: 269 KYYGPAWIGEFNDLEF-------LKEMKNRLTEFSYLSNSVKISELLEYLERENRFGP-Y 320
Query: 414 LSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKT 456
+ L S LK P + +A TH +P G K+
Sbjct: 321 YRVDVLASRLKVNMPPMNSLLGCLGDA----VRTHFDPRGFKS 359
>sp|Q97ZH0|TRM1_SULSO tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus
solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 /
P2) GN=trm1 PE=3 SV=1
Length = 378
Score = 125 bits (313), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 167/347 (48%), Gaps = 37/347 (10%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V+ LKP +++ALSA+G+R +RY E Q++ D + + + N K NG + +
Sbjct: 50 VVSILKPKIIVDALSATGIRGIRYYVESWKSEQLILNDKNPNATSLIQINAKNNG-IENA 108
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
K+ + A+A +Y + D +D+DP+GSP+ F+ S++ + G++ TATD++ L G
Sbjct: 109 KIYNKDANALLYEVKS----DYIDIDPFGSPAPFILSSLNAATRNGIVAFTATDLSPLEG 164
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
+ C KY + + E+ LR+L+ I A ++ + P+ S D+Y R+FVR
Sbjct: 165 SSPTSCRRKYDAINHKLSSSKELGLRVLIGKIIREAAILEKTVYPLFSFYADYYYRLFVR 224
Query: 296 IYTSASAMKSTPLK-LSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
+ A K L Y +C C GF V + C
Sbjct: 225 VENGARKADDNINKHLKYFGECPRC-----------------------GFQTFVEENCKT 261
Query: 355 ----CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDV 410
CG+ F++ GP++ G ++ E++ I+ ++ S + +++RI +L I +E
Sbjct: 262 KCPVCGEIFSIIGPLYIGPLYSMEFLKRIM-DLYSNFNYLTSFNRIQKLLNVIEKEARFK 320
Query: 411 PLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTD 457
+F ++ L S LK SA+ +++ S TH P G++TD
Sbjct: 321 NVFYNISKLASKLKI---SAIPPIESILECLGDASRTHFAPTGIRTD 364
>sp|Q97AR2|TRM1_THEVO tRNA (guanine(26)-N(2))-dimethyltransferase OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 /
NBRC 15438 / GSS1) GN=trm1 PE=3 SV=1
Length = 342
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 154/358 (43%), Gaps = 56/358 (15%)
Query: 115 NVLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVAC 174
+++ + +VL+ SG+R +R + E + +VV + +S E ++NI N +
Sbjct: 40 DLINEFGVEKVLDGFGGSGVRGIRISLETKA--KVVIAEISPSSCEIIKQNIAINNA--- 94
Query: 175 SKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLC 234
E+ L ++ FD +D+DPYGSP +LD+AI +V GG L TATD + L
Sbjct: 95 ---EADLIHDNFQCVSSHIAFDYIDVDPYGSPVPYLDAAIMNVRKGGYLGITATDQSTLT 151
Query: 235 GGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFV 294
G +YG+Y + Y HEM +R L+ I A + RYIEP LS+ Y RVFV
Sbjct: 152 GSTLNKTRRRYGAYIVNDIYRHEMGIRTLIGYIARRAAAFDRYIEPQLSIWNHHYYRVFV 211
Query: 295 RIYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSD 354
++ + + Y+ NK+ ++ D
Sbjct: 212 KVGKGVNGADKMIENIGYL-------------------NKHTTI---------------D 237
Query: 355 CGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFL 414
K GP+W +++ E + I R P R+S + I + + LF+
Sbjct: 238 NSFKDVNEGPVWLSNLNNAELLEKI---------RDP---RVSKKIEMIKHD--NRLLFV 283
Query: 415 SLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVK 472
L ++ + P ++ GY T +P G+KTD P + +I++ + K
Sbjct: 284 DLTDIARKTSLSLPPLAKVMDEIMKHGYEAHRTSFSPTGIKTDCPYAEVSEILKAYAK 341
>sp|Q971V9|TRM1_SULTO tRNA (guanine(26)-N(2))-dimethyltransferase OS=Sulfolobus tokodaii
(strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=trm1
PE=3 SV=1
Length = 374
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 165/352 (46%), Gaps = 30/352 (8%)
Query: 117 LRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSK 176
L +KP V++ALSASG+R +RY E+ GI +++ D + + E ++N + N ++
Sbjct: 51 LSVIKPKSVVDALSASGVRGIRYYTEIGGIEKLILNDKNPIATELIKKNAEKN--YVNAR 108
Query: 177 VESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGG 236
+ + A++ +Y + D VD+DP+GSP+ F+ SAI + + G + TATD++ L
Sbjct: 109 ITTKDANSLLYEIKA----DFVDIDPFGSPAPFILSAINATINKGYVAFTATDLSALECS 164
Query: 237 NGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRI 296
+ KY R + E+ +R L+A + ++ P+ S D+Y RVF RI
Sbjct: 165 SKFSARRKYDLICERLSFSKELGIRGLIAKVIREGAIIEKAAYPIFSFYFDYYYRVFFRI 224
Query: 297 YTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCG 356
A + K Y Y+C C + V A K +C CG
Sbjct: 225 ENGAKKVDKLLEKQGYYYECSKCG---YREVDYYAERK----------------ICPRCG 265
Query: 357 KKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLSL 416
+ GP W+G + ++E++ S+ +K+ + + +++ +L + EE V + L
Sbjct: 266 IEMRRYGPAWTGELWNREFLLSMKENLKNF-TYFDTFMQVNKLLNILVEESKYVSPYFRL 324
Query: 417 HNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
+ S +K P R ++ S TH + G+KT+ + I + ++
Sbjct: 325 DFIASLIKRNIPK----REKMLECLKEASITHFDYRGIKTNKEIDEIVNCIK 372
>sp|O29443|TRM1_ARCFU tRNA (guanine(26)-N(2))-dimethyltransferase OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=trm1 PE=3 SV=1
Length = 349
Score = 123 bits (308), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 153/353 (43%), Gaps = 39/353 (11%)
Query: 116 VLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS 175
V + +ALSASG+R +R A +E + V D +V+ N++ NG
Sbjct: 31 VFATMDSKEYFDALSASGIRGIRAA--LEAGKKAVFNDVSPKAVKVIEENLRENG----- 83
Query: 176 KVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCG 235
V + + + + F+ +D+DP+GSP+ F+DSA S L TATD A LCG
Sbjct: 84 -VSGEVINGDAAAVMRQRAFEHIDIDPFGSPAPFMDSACFSAKR--YLSVTATDTAALCG 140
Query: 236 GNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVR 295
KYG++ ++ HE+ LR+L+ + A +Y++ + P++S + Y RV +
Sbjct: 141 SATNSGLKKYGAFAVKTDVYHEVGLRMLIGFVVREATKYEKALFPLISWVREHYYRVHFK 200
Query: 296 IYTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDC 355
I S + K+ Y+ C C + +G A +C
Sbjct: 201 IKKSTAMSAKVYEKMGYLAYCSTCLRKKVLGMGEGAER-------------------CEC 241
Query: 356 GKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISAVLTTISEELPDVPLFLS 415
G KF++ GPIW G + +++ + + A ++ A L I E+ D P S
Sbjct: 242 GGKFSLIGPIWLGELKQRDFAEKVAEK---------AEGKLRAFLEKILAEI-DAPTAYS 291
Query: 416 LHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMR 468
L L T P + + GY S TH +KTDA V+ I+R
Sbjct: 292 LPALAKIHSLTLPPTDVVVEELKKLGYEASRTHYCGFCVKTDADRDVVVKILR 344
>sp|P57705|TRM1_HALSA tRNA (guanine(26)-N(2))-dimethyltransferase OS=Halobacterium
salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
GN=trm1 PE=3 SV=1
Length = 371
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 153/349 (43%), Gaps = 34/349 (9%)
Query: 118 RQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV 177
R+ + L+A++ASG+R +R A V D D +VE N+ NG
Sbjct: 49 REPRAASYLDAMTASGIRGVRAA---NAGWDVTMADVDADAVELATSNLARNGL----DG 101
Query: 178 ESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMC-TATDMAVLCGG 236
E DA + H + DVVD+DP+GSP F D+A A+ L+C TATD A LCG
Sbjct: 102 EVVARDANSLLHDHDRVLDVVDIDPFGSPMPFADAAF---ANARNLVCVTATDTAPLCGA 158
Query: 237 NGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRI 296
+ E KY + P Y EM LRILL + A RY + P+LS D YVR ++ +
Sbjct: 159 HFESGVRKYSATPRNTNYHAEMGLRILLGALARTAARYDVGVTPILSHVSDHYVRTYLEL 218
Query: 297 YTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDC- 355
A+ + ++ +VY C C S G A+ + C C
Sbjct: 219 DHRATDANAAVEQVGHVYHCQQCLS-RDHEYGLVAAPRAE---------------CPRCG 262
Query: 356 GKKFNMGGPIWSGRIHDQEWVNSILGEV-KSMKDRYPAYDRISAVLTTISEELPDVPLFL 414
G + GP+W G H++ + S+ ++ + M + A+ +L TI EL + P
Sbjct: 263 GHQVLTAGPLWLGPAHEEAFAASVREQLTREMGEASQAFH----LLQTIEGELHE-PTHY 317
Query: 415 SLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVI 463
H L S + F + +AG R S TH KTD + +
Sbjct: 318 DQHRLYSQWGEPAVGMAEFLDQLRDAGLRASRTHFGGTTFKTDGGLAEV 366
>sp|B0R713|TRM1_HALS3 tRNA (guanine(26)-N(2))-dimethyltransferase OS=Halobacterium
salinarum (strain ATCC 29341 / DSM 671 / R1) GN=trm1
PE=3 SV=1
Length = 371
Score = 122 bits (307), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/349 (29%), Positives = 153/349 (43%), Gaps = 34/349 (9%)
Query: 118 RQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV 177
R+ + L+A++ASG+R +R A V D D +VE N+ NG
Sbjct: 49 REPRAASYLDAMTASGIRGVRAA---NAGWDVTMADVDADAVELATSNLARNGL----DG 101
Query: 178 ESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMC-TATDMAVLCGG 236
E DA + H + DVVD+DP+GSP F D+A A+ L+C TATD A LCG
Sbjct: 102 EVVARDANSLLHDHDRVLDVVDIDPFGSPMPFADAAF---ANARNLVCVTATDTAPLCGA 158
Query: 237 NGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRI 296
+ E KY + P Y EM LRILL + A RY + P+LS D YVR ++ +
Sbjct: 159 HFESGVRKYSATPRNTNYHAEMGLRILLGALARTAARYDVGVTPILSHVSDHYVRTYLEL 218
Query: 297 YTSASAMKSTPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDC- 355
A+ + ++ +VY C C S G A+ + C C
Sbjct: 219 DHRATDANAAVEQVGHVYHCQQCLS-RDHEYGLVAAPRAE---------------CPRCG 262
Query: 356 GKKFNMGGPIWSGRIHDQEWVNSILGEV-KSMKDRYPAYDRISAVLTTISEELPDVPLFL 414
G + GP+W G H++ + S+ ++ + M + A+ +L TI EL + P
Sbjct: 263 GHQVLTAGPLWLGPAHEEAFAASVREQLTREMGEASQAFH----LLQTIEGELHE-PTHY 317
Query: 415 SLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVI 463
H L S + F + +AG R S TH KTD + +
Sbjct: 318 DQHRLYSQWGEPAVGMAEFLDQLRDAGLRASRTHFGGTTFKTDGGLAEV 366
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.132 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,189,487
Number of Sequences: 539616
Number of extensions: 9297496
Number of successful extensions: 31181
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 30865
Number of HSP's gapped (non-prelim): 186
length of query: 581
length of database: 191,569,459
effective HSP length: 123
effective length of query: 458
effective length of database: 125,196,691
effective search space: 57340084478
effective search space used: 57340084478
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)