Query 047386
Match_columns 581
No_of_seqs 323 out of 1507
Neff 5.5
Searched_HMMs 29240
Date Mon Mar 25 18:38:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047386.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047386hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3axs_A Probable N(2),N(2)-dime 100.0 5.3E-92 1.8E-96 751.0 37.0 370 8-475 2-383 (392)
2 2dul_A N(2),N(2)-dimethylguano 100.0 1.3E-84 4.5E-89 690.9 36.9 356 6-469 2-377 (378)
3 3k6r_A Putative transferase PH 99.8 1.3E-18 4.4E-23 177.8 17.5 100 122-227 126-225 (278)
4 2b78_A Hypothetical protein SM 99.7 1E-16 3.5E-21 169.9 19.3 138 122-289 213-367 (385)
5 4dmg_A Putative uncharacterize 99.7 4.2E-16 1.4E-20 166.2 18.8 142 122-296 215-382 (393)
6 2frn_A Hypothetical protein PH 99.6 1.6E-15 5.6E-20 153.2 16.2 128 122-280 126-253 (278)
7 2igt_A SAM dependent methyltra 99.6 6.5E-15 2.2E-19 153.4 20.6 129 122-279 154-299 (332)
8 3c0k_A UPF0064 protein YCCW; P 99.6 6.2E-15 2.1E-19 156.2 19.7 137 122-288 221-376 (396)
9 2as0_A Hypothetical protein PH 99.6 9.3E-15 3.2E-19 154.6 17.7 146 122-297 218-393 (396)
10 3v97_A Ribosomal RNA large sub 99.6 3E-14 1E-18 162.1 17.8 103 122-227 540-657 (703)
11 2yx1_A Hypothetical protein MJ 99.6 1.8E-14 6.1E-19 149.8 12.9 96 122-227 196-291 (336)
12 1wxx_A TT1595, hypothetical pr 99.5 6.2E-14 2.1E-18 147.9 16.5 129 121-281 209-353 (382)
13 3p9n_A Possible methyltransfer 99.5 4.2E-13 1.4E-17 126.4 14.3 124 121-249 44-178 (189)
14 2ift_A Putative methylase HI07 99.4 2.5E-13 8.6E-18 130.3 9.3 126 122-250 54-188 (201)
15 3a27_A TYW2, uncharacterized p 99.4 1.5E-12 5E-17 131.3 14.8 101 121-227 119-219 (272)
16 2fpo_A Methylase YHHF; structu 99.4 3.1E-12 1.1E-16 122.7 12.0 101 122-227 55-160 (202)
17 3lpm_A Putative methyltransfer 99.3 3E-11 1E-15 119.9 16.3 101 122-226 50-175 (259)
18 2esr_A Methyltransferase; stru 99.3 4.2E-12 1.4E-16 117.7 9.5 103 121-227 31-138 (177)
19 3ajd_A Putative methyltransfer 99.3 1.8E-11 6.3E-16 123.2 12.4 104 121-227 83-211 (274)
20 3bt7_A TRNA (uracil-5-)-methyl 99.3 1.5E-11 5E-16 129.3 12.1 98 122-227 214-326 (369)
21 2fhp_A Methylase, putative; al 99.3 2.2E-11 7.4E-16 113.0 11.0 103 121-227 44-154 (187)
22 3evz_A Methyltransferase; NYSG 99.2 6.5E-11 2.2E-15 114.1 14.2 145 121-302 55-223 (230)
23 3m4x_A NOL1/NOP2/SUN family pr 99.2 2.7E-11 9.4E-16 131.5 12.5 104 121-227 105-234 (456)
24 3m6w_A RRNA methylase; rRNA me 99.2 4.8E-11 1.7E-15 129.8 12.0 103 121-227 101-229 (464)
25 3dr5_A Putative O-methyltransf 99.2 1E-10 3.6E-15 114.4 12.2 103 123-226 58-162 (221)
26 3tfw_A Putative O-methyltransf 99.2 1.6E-10 5.5E-15 114.3 13.6 105 121-227 63-170 (248)
27 3eey_A Putative rRNA methylase 99.2 7.6E-11 2.6E-15 111.0 10.5 104 122-227 23-139 (197)
28 1ws6_A Methyltransferase; stru 99.2 7.4E-11 2.5E-15 107.6 9.7 100 122-228 42-148 (171)
29 3u81_A Catechol O-methyltransf 99.2 3.1E-10 1.1E-14 109.6 14.6 104 121-227 58-170 (221)
30 3tr6_A O-methyltransferase; ce 99.2 1.1E-10 3.8E-15 112.1 10.9 105 121-227 64-174 (225)
31 1ixk_A Methyltransferase; open 99.1 1.6E-10 5.6E-15 118.9 12.1 103 121-227 118-246 (315)
32 1iy9_A Spermidine synthase; ro 99.1 2.1E-10 7.4E-15 116.0 12.4 104 122-227 76-189 (275)
33 1wy7_A Hypothetical protein PH 99.1 1.1E-09 3.9E-14 103.7 16.7 94 121-227 49-148 (207)
34 2frx_A Hypothetical protein YE 99.1 1.7E-10 6E-15 125.8 11.9 104 121-227 117-246 (479)
35 3duw_A OMT, O-methyltransferas 99.1 3.4E-10 1.1E-14 108.8 12.3 105 121-227 58-167 (223)
36 3njr_A Precorrin-6Y methylase; 99.1 5.1E-10 1.7E-14 107.7 12.9 99 122-227 56-154 (204)
37 2avd_A Catechol-O-methyltransf 99.1 3.1E-10 1.1E-14 109.3 11.2 105 121-227 69-179 (229)
38 1sui_A Caffeoyl-COA O-methyltr 99.1 5.2E-10 1.8E-14 111.1 13.1 105 121-227 79-190 (247)
39 2jjq_A Uncharacterized RNA met 99.1 2.3E-10 7.7E-15 123.1 11.0 96 121-227 290-387 (425)
40 2r6z_A UPF0341 protein in RSP 99.1 1.3E-10 4.5E-15 116.9 8.4 77 122-203 84-170 (258)
41 3c3y_A Pfomt, O-methyltransfer 99.1 4.7E-10 1.6E-14 110.4 11.2 105 121-227 70-181 (237)
42 3mti_A RRNA methylase; SAM-dep 99.1 4.6E-10 1.6E-14 104.6 10.6 100 122-227 23-135 (185)
43 3r3h_A O-methyltransferase, SA 99.1 8.5E-11 2.9E-15 116.5 5.8 105 121-227 60-170 (242)
44 3e05_A Precorrin-6Y C5,15-meth 99.1 8.3E-10 2.8E-14 104.8 12.4 101 122-227 41-142 (204)
45 3c3p_A Methyltransferase; NP_9 99.1 5.3E-10 1.8E-14 106.8 10.9 104 121-227 56-160 (210)
46 3ntv_A MW1564 protein; rossman 99.1 4E-10 1.4E-14 110.1 10.2 104 121-227 71-176 (232)
47 1nv8_A HEMK protein; class I a 99.1 8.2E-10 2.8E-14 112.2 12.3 99 122-227 124-249 (284)
48 2ozv_A Hypothetical protein AT 99.0 2.2E-10 7.4E-15 114.5 7.8 103 122-227 37-170 (260)
49 1inl_A Spermidine synthase; be 99.0 6.1E-10 2.1E-14 113.8 11.2 104 122-227 91-205 (296)
50 3tma_A Methyltransferase; thum 99.0 8.5E-10 2.9E-14 114.7 12.1 103 121-227 203-317 (354)
51 2qfm_A Spermine synthase; sper 99.0 4.5E-10 1.5E-14 118.7 10.0 105 121-227 188-314 (364)
52 3dxy_A TRNA (guanine-N(7)-)-me 99.0 1.7E-09 5.7E-14 105.6 12.9 103 121-227 34-150 (218)
53 1xdz_A Methyltransferase GIDB; 99.0 4.9E-09 1.7E-13 102.6 15.9 101 122-226 71-173 (240)
54 2b9e_A NOL1/NOP2/SUN domain fa 99.0 1E-09 3.4E-14 113.4 11.4 80 121-203 102-183 (309)
55 2oo3_A Protein involved in cat 99.0 1.7E-10 5.8E-15 118.0 5.4 98 120-226 90-197 (283)
56 2o07_A Spermidine synthase; st 99.0 1E-09 3.5E-14 112.8 10.9 104 122-227 96-209 (304)
57 3hm2_A Precorrin-6Y C5,15-meth 99.0 2.1E-09 7.3E-14 98.7 11.7 102 122-227 26-127 (178)
58 3mb5_A SAM-dependent methyltra 99.0 1.3E-09 4.5E-14 106.8 10.8 102 121-227 93-194 (255)
59 1mjf_A Spermidine synthase; sp 99.0 1.3E-09 4.5E-14 110.3 11.0 102 122-227 76-193 (281)
60 3adn_A Spermidine synthase; am 99.0 4.3E-10 1.5E-14 115.3 7.2 104 122-227 84-198 (294)
61 2pt6_A Spermidine synthase; tr 99.0 1.2E-09 4.3E-14 113.0 10.8 104 122-227 117-230 (321)
62 1uwv_A 23S rRNA (uracil-5-)-me 99.0 1.1E-09 3.7E-14 117.7 10.2 100 121-227 286-389 (433)
63 1yzh_A TRNA (guanine-N(7)-)-me 99.0 3.3E-09 1.1E-13 101.7 12.2 102 122-227 42-156 (214)
64 3g89_A Ribosomal RNA small sub 99.0 6.1E-09 2.1E-13 103.7 14.5 102 122-227 81-184 (249)
65 2qm3_A Predicted methyltransfe 99.0 1.7E-09 5.9E-14 113.6 11.0 102 120-227 171-278 (373)
66 1o54_A SAM-dependent O-methylt 99.0 2.2E-09 7.4E-14 107.3 11.1 102 121-227 112-213 (277)
67 2b3t_A Protein methyltransfera 99.0 2E-09 6.8E-14 107.7 10.8 101 121-227 109-238 (276)
68 3gdh_A Trimethylguanosine synt 99.0 3.5E-10 1.2E-14 110.0 5.1 99 121-226 78-180 (241)
69 1l3i_A Precorrin-6Y methyltran 99.0 5.2E-09 1.8E-13 96.4 12.6 101 121-227 33-134 (192)
70 4dzr_A Protein-(glutamine-N5) 99.0 7.9E-10 2.7E-14 104.0 7.1 101 122-227 31-165 (215)
71 1o9g_A RRNA methyltransferase; 98.9 4.2E-10 1.4E-14 110.7 5.0 104 122-227 52-214 (250)
72 4hc4_A Protein arginine N-meth 98.9 1.3E-09 4.3E-14 115.8 8.9 101 119-226 81-188 (376)
73 3cbg_A O-methyltransferase; cy 98.9 2.4E-09 8.3E-14 104.7 10.2 105 121-227 72-182 (232)
74 2gpy_A O-methyltransferase; st 98.9 1.8E-09 6E-14 104.8 9.1 103 121-226 54-159 (233)
75 4fzv_A Putative methyltransfer 98.9 6.1E-09 2.1E-13 109.9 13.7 107 120-227 147-284 (359)
76 3kr9_A SAM-dependent methyltra 98.9 6E-09 2E-13 103.4 12.5 136 122-295 16-155 (225)
77 2fca_A TRNA (guanine-N(7)-)-me 98.9 9.2E-09 3.1E-13 99.4 13.5 103 121-227 38-153 (213)
78 2yxl_A PH0851 protein, 450AA l 98.9 2.4E-09 8E-14 115.5 10.1 104 121-227 259-389 (450)
79 1dus_A MJ0882; hypothetical pr 98.9 6.1E-09 2.1E-13 96.1 11.4 100 122-227 53-157 (194)
80 3lec_A NADB-rossmann superfami 98.9 5.9E-09 2E-13 103.7 12.0 138 122-296 22-162 (230)
81 2hnk_A SAM-dependent O-methylt 98.9 5.1E-09 1.7E-13 102.3 11.3 105 121-227 60-181 (239)
82 2vdv_E TRNA (guanine-N(7)-)-me 98.9 3.5E-09 1.2E-13 104.1 10.1 106 122-232 50-177 (246)
83 2yvl_A TRMI protein, hypotheti 98.9 7E-09 2.4E-13 100.6 11.9 100 121-227 91-190 (248)
84 1sqg_A SUN protein, FMU protei 98.9 2.5E-09 8.4E-14 114.5 9.5 102 121-227 246-374 (429)
85 1uir_A Polyamine aminopropyltr 98.9 5.8E-09 2E-13 107.4 11.8 104 122-227 78-195 (314)
86 3dmg_A Probable ribosomal RNA 98.9 3.1E-09 1E-13 112.7 10.0 99 121-227 233-340 (381)
87 1g8a_A Fibrillarin-like PRE-rR 98.9 2.1E-08 7.3E-13 96.6 14.9 100 122-226 74-177 (227)
88 4dcm_A Ribosomal RNA large sub 98.9 3.9E-09 1.3E-13 111.6 10.5 104 121-227 222-334 (375)
89 2b2c_A Spermidine synthase; be 98.9 4.5E-09 1.5E-13 108.7 10.3 104 122-227 109-222 (314)
90 3ldg_A Putative uncharacterize 98.9 6.5E-09 2.2E-13 110.5 11.7 105 121-229 194-345 (384)
91 3tm4_A TRNA (guanine N2-)-meth 98.9 3.4E-09 1.1E-13 111.6 9.4 101 121-227 217-330 (373)
92 2yxd_A Probable cobalt-precorr 98.9 2.6E-08 8.9E-13 91.2 14.2 96 122-227 36-131 (183)
93 3gjy_A Spermidine synthase; AP 98.9 6E-09 2.1E-13 108.3 10.9 101 123-227 91-200 (317)
94 1xj5_A Spermidine synthase 1; 98.9 9E-09 3.1E-13 107.4 12.2 104 122-227 121-235 (334)
95 2i7c_A Spermidine synthase; tr 98.9 7.3E-09 2.5E-13 105.0 10.8 104 122-227 79-192 (283)
96 1yb2_A Hypothetical protein TA 98.9 4.7E-09 1.6E-13 105.0 9.3 101 121-227 110-211 (275)
97 3ldu_A Putative methylase; str 98.9 8.1E-09 2.8E-13 109.6 11.4 81 121-205 195-313 (385)
98 3k0b_A Predicted N6-adenine-sp 98.9 8E-09 2.7E-13 110.0 11.2 81 121-205 201-319 (393)
99 2ipx_A RRNA 2'-O-methyltransfe 98.8 1.1E-08 3.7E-13 99.4 11.2 101 122-227 78-182 (233)
100 2nxc_A L11 mtase, ribosomal pr 98.8 4.4E-09 1.5E-13 104.6 8.4 98 121-227 120-218 (254)
101 1jsx_A Glucose-inhibited divis 98.8 5.3E-09 1.8E-13 98.9 8.5 101 121-227 65-165 (207)
102 2f8l_A Hypothetical protein LM 98.8 2.8E-09 9.4E-14 110.5 7.0 103 122-230 131-259 (344)
103 3gnl_A Uncharacterized protein 98.8 1.8E-08 6.2E-13 101.1 12.4 137 122-296 22-162 (244)
104 3bwc_A Spermidine synthase; SA 98.8 1.1E-08 3.7E-13 104.8 10.9 104 122-227 96-210 (304)
105 2oyr_A UPF0341 protein YHIQ; a 98.8 3.8E-09 1.3E-13 106.7 7.3 92 123-219 90-192 (258)
106 3grz_A L11 mtase, ribosomal pr 98.8 2.2E-09 7.5E-14 101.7 5.2 97 122-226 61-158 (205)
107 2h00_A Methyltransferase 10 do 98.8 2.2E-09 7.7E-14 105.4 4.9 78 122-202 66-148 (254)
108 1fbn_A MJ fibrillarin homologu 98.8 5.2E-08 1.8E-12 94.6 14.5 99 122-226 75-177 (230)
109 2pwy_A TRNA (adenine-N(1)-)-me 98.8 1.5E-08 5.2E-13 98.8 10.3 101 121-227 96-198 (258)
110 3r0q_C Probable protein argini 98.8 6.7E-09 2.3E-13 109.4 8.1 101 120-227 62-169 (376)
111 3orh_A Guanidinoacetate N-meth 98.8 1.7E-08 5.7E-13 99.2 10.1 100 121-226 60-169 (236)
112 3jwh_A HEN1; methyltransferase 98.8 3.5E-08 1.2E-12 94.3 11.8 169 122-299 30-211 (217)
113 3ll7_A Putative methyltransfer 98.8 1.4E-08 4.8E-13 108.9 9.7 76 122-203 94-172 (410)
114 1i9g_A Hypothetical protein RV 98.7 2.6E-08 8.8E-13 98.9 10.3 103 121-227 99-203 (280)
115 3bzb_A Uncharacterized protein 98.7 5.3E-08 1.8E-12 98.2 11.8 105 121-227 79-205 (281)
116 1ne2_A Hypothetical protein TA 98.7 3.9E-08 1.3E-12 92.9 9.8 90 121-227 51-146 (200)
117 3dh0_A SAM dependent methyltra 98.7 5.9E-08 2E-12 92.3 11.0 102 122-227 38-143 (219)
118 3q7e_A Protein arginine N-meth 98.7 3.1E-08 1E-12 103.2 9.7 100 121-226 66-172 (349)
119 3jwg_A HEN1, methyltransferase 98.7 4.9E-08 1.7E-12 93.2 10.3 149 122-279 30-187 (219)
120 1zx0_A Guanidinoacetate N-meth 98.7 4.8E-08 1.6E-12 95.0 10.4 99 122-226 61-169 (236)
121 3f4k_A Putative methyltransfer 98.7 4.1E-08 1.4E-12 95.6 9.9 101 122-227 47-150 (257)
122 3lbf_A Protein-L-isoaspartate 98.7 3.3E-08 1.1E-12 93.8 8.8 100 121-229 77-176 (210)
123 3m70_A Tellurite resistance pr 98.7 4.5E-08 1.5E-12 97.6 9.5 98 121-227 120-223 (286)
124 3kkz_A Uncharacterized protein 98.7 4.2E-08 1.5E-12 96.8 9.2 101 122-227 47-150 (267)
125 4df3_A Fibrillarin-like rRNA/T 98.7 1.4E-07 4.7E-12 94.0 12.8 101 121-226 77-181 (233)
126 2b25_A Hypothetical protein; s 98.7 3.9E-08 1.3E-12 101.1 8.9 106 121-227 105-219 (336)
127 3hem_A Cyclopropane-fatty-acyl 98.7 1E-07 3.4E-12 96.1 11.4 99 121-227 72-183 (302)
128 1g6q_1 HnRNP arginine N-methyl 98.7 5.4E-08 1.8E-12 100.5 9.5 99 122-226 39-144 (328)
129 2fyt_A Protein arginine N-meth 98.6 5.1E-08 1.8E-12 101.3 9.1 99 121-225 64-169 (340)
130 1i1n_A Protein-L-isoaspartate 98.6 6.3E-08 2.2E-12 93.0 9.0 104 121-227 77-182 (226)
131 2y1w_A Histone-arginine methyl 98.6 3.9E-08 1.3E-12 102.3 8.0 100 121-227 50-155 (348)
132 4htf_A S-adenosylmethionine-de 98.6 8.9E-08 3E-12 95.4 9.8 101 122-227 69-173 (285)
133 2pbf_A Protein-L-isoaspartate 98.6 7.3E-08 2.5E-12 92.7 8.7 104 121-227 80-193 (227)
134 2xvm_A Tellurite resistance pr 98.6 9.5E-08 3.3E-12 89.0 9.2 99 121-227 32-136 (199)
135 3b3j_A Histone-arginine methyl 98.6 2.9E-08 9.8E-13 108.3 6.4 101 120-227 157-263 (480)
136 1nkv_A Hypothetical protein YJ 98.6 8.2E-08 2.8E-12 93.5 8.8 101 121-227 36-140 (256)
137 3ckk_A TRNA (guanine-N(7)-)-me 98.6 1.4E-07 4.7E-12 93.1 10.4 102 122-227 47-168 (235)
138 3q87_B N6 adenine specific DNA 98.6 6.5E-07 2.2E-11 83.2 14.2 88 121-227 23-123 (170)
139 3id6_C Fibrillarin-like rRNA/T 98.6 7.8E-07 2.7E-11 88.4 15.6 101 122-227 77-181 (232)
140 3ocj_A Putative exported prote 98.6 3.6E-07 1.2E-11 92.4 13.1 103 121-227 118-227 (305)
141 3dlc_A Putative S-adenosyl-L-m 98.6 1.1E-07 3.7E-12 89.5 8.5 99 124-227 46-148 (219)
142 3fpf_A Mtnas, putative unchara 98.6 3E-07 1E-11 94.8 12.3 100 121-227 122-222 (298)
143 2ar0_A M.ecoki, type I restric 98.6 6.8E-08 2.3E-12 106.8 7.9 110 121-230 169-315 (541)
144 1dl5_A Protein-L-isoaspartate 98.6 1.5E-07 5.1E-12 96.4 9.8 101 121-227 75-175 (317)
145 1ri5_A MRNA capping enzyme; me 98.6 6.2E-08 2.1E-12 96.1 6.8 102 122-227 65-174 (298)
146 2cmg_A Spermidine synthase; tr 98.6 2.9E-08 9.8E-13 100.0 4.1 97 122-227 73-171 (262)
147 3mgg_A Methyltransferase; NYSG 98.6 2.1E-07 7.1E-12 92.0 10.2 106 122-232 38-147 (276)
148 1kpg_A CFA synthase;, cyclopro 98.5 2.5E-07 8.5E-12 92.1 10.7 98 122-227 65-168 (287)
149 2pjd_A Ribosomal RNA small sub 98.5 7.6E-08 2.6E-12 99.8 7.2 98 122-227 197-303 (343)
150 3v97_A Ribosomal RNA large sub 98.5 2.1E-07 7.3E-12 105.9 11.3 110 121-232 190-352 (703)
151 1ve3_A Hypothetical protein PH 98.5 1.2E-07 4.2E-12 90.2 8.0 99 122-228 39-143 (227)
152 1jg1_A PIMT;, protein-L-isoasp 98.5 1.5E-07 5.1E-12 91.6 8.5 99 121-227 91-189 (235)
153 3vc1_A Geranyl diphosphate 2-C 98.5 1.3E-07 4.5E-12 95.9 8.3 102 121-227 117-221 (312)
154 1nt2_A Fibrillarin-like PRE-rR 98.5 1.6E-06 5.6E-11 83.8 15.4 99 122-226 58-160 (210)
155 3gu3_A Methyltransferase; alph 98.5 1.7E-07 5.9E-12 93.8 8.7 102 122-229 23-128 (284)
156 3g5t_A Trans-aconitate 3-methy 98.5 2.9E-07 1E-11 92.5 10.2 104 122-227 37-149 (299)
157 2fk8_A Methoxy mycolic acid sy 98.5 3.7E-07 1.3E-11 92.4 10.6 99 121-227 90-194 (318)
158 1xxl_A YCGJ protein; structura 98.5 4E-07 1.4E-11 88.6 9.8 100 121-227 21-124 (239)
159 2okc_A Type I restriction enzy 98.5 1.1E-07 3.6E-12 102.4 6.0 106 121-229 171-309 (445)
160 2yxe_A Protein-L-isoaspartate 98.5 3.9E-07 1.3E-11 86.6 9.1 101 121-227 77-177 (215)
161 3sm3_A SAM-dependent methyltra 98.4 2.7E-07 9.3E-12 87.9 7.5 102 122-227 31-141 (235)
162 3g07_A 7SK snRNA methylphospha 98.4 3.6E-07 1.2E-11 92.3 8.8 107 120-227 45-220 (292)
163 2ex4_A Adrenal gland protein A 98.4 2.3E-07 7.8E-12 90.1 7.0 100 122-227 80-185 (241)
164 3ofk_A Nodulation protein S; N 98.4 1.9E-07 6.6E-12 88.7 6.4 97 122-228 52-155 (216)
165 3lcc_A Putative methyl chlorid 98.4 2.8E-07 9.7E-12 89.0 7.5 100 121-227 66-171 (235)
166 3bus_A REBM, methyltransferase 98.4 5.7E-07 1.9E-11 88.5 9.6 101 122-227 62-166 (273)
167 1wzn_A SAM-dependent methyltra 98.4 5.5E-07 1.9E-11 87.5 9.4 97 122-227 42-145 (252)
168 4gek_A TRNA (CMO5U34)-methyltr 98.4 2.9E-07 1E-11 92.3 7.6 100 122-226 71-177 (261)
169 3o4f_A Spermidine synthase; am 98.4 6.1E-07 2.1E-11 92.3 9.8 104 122-227 84-198 (294)
170 3lkd_A Type I restriction-modi 98.4 5E-07 1.7E-11 100.1 9.8 109 121-230 221-361 (542)
171 3g5l_A Putative S-adenosylmeth 98.4 4.4E-07 1.5E-11 88.5 8.3 98 121-227 44-145 (253)
172 4fsd_A Arsenic methyltransfera 98.4 5.8E-07 2E-11 94.5 9.8 106 121-227 83-203 (383)
173 3i9f_A Putative type 11 methyl 98.4 1.6E-06 5.6E-11 79.1 11.6 91 122-227 18-112 (170)
174 2o57_A Putative sarcosine dime 98.4 7.1E-07 2.4E-11 89.2 9.7 102 121-227 82-187 (297)
175 3uwp_A Histone-lysine N-methyl 98.4 7.8E-07 2.7E-11 95.7 10.6 104 121-226 173-287 (438)
176 2kw5_A SLR1183 protein; struct 98.4 1.2E-06 4.1E-11 82.3 10.7 96 124-227 32-131 (202)
177 3khk_A Type I restriction-modi 98.4 1.7E-07 6E-12 103.7 5.5 105 124-230 247-398 (544)
178 1vl5_A Unknown conserved prote 98.4 8.7E-07 3E-11 86.8 10.0 100 121-227 37-140 (260)
179 1vbf_A 231AA long hypothetical 98.4 4E-07 1.4E-11 87.6 7.4 96 121-227 70-165 (231)
180 1r18_A Protein-L-isoaspartate( 98.4 3.4E-07 1.2E-11 88.4 6.6 100 121-227 84-194 (227)
181 2pxx_A Uncharacterized protein 98.4 1.7E-07 5.9E-12 88.1 4.4 98 122-227 43-159 (215)
182 1u2z_A Histone-lysine N-methyl 98.4 1E-06 3.6E-11 95.1 10.6 104 121-226 242-358 (433)
183 3d2l_A SAM-dependent methyltra 98.4 7.1E-07 2.4E-11 85.8 8.3 96 122-227 34-137 (243)
184 3dtn_A Putative methyltransfer 98.4 3.7E-07 1.3E-11 87.8 6.3 98 122-227 45-148 (234)
185 2gb4_A Thiopurine S-methyltran 98.4 5.7E-07 1.9E-11 89.8 7.5 103 121-226 68-190 (252)
186 3thr_A Glycine N-methyltransfe 98.3 8.6E-07 3E-11 88.2 8.6 105 122-229 58-177 (293)
187 3m33_A Uncharacterized protein 98.3 5.2E-07 1.8E-11 87.2 6.4 91 121-224 48-139 (226)
188 3h2b_A SAM-dependent methyltra 98.3 7.3E-06 2.5E-10 77.0 13.9 94 122-227 42-141 (203)
189 3cgg_A SAM-dependent methyltra 98.3 5.3E-06 1.8E-10 76.3 12.6 94 122-227 47-147 (195)
190 3dli_A Methyltransferase; PSI- 98.3 6.6E-06 2.2E-10 79.7 13.3 93 122-228 42-141 (240)
191 3l8d_A Methyltransferase; stru 98.3 2.6E-06 8.7E-11 82.0 10.2 96 122-227 54-153 (242)
192 3bkw_A MLL3908 protein, S-aden 98.3 9.5E-07 3.2E-11 84.9 6.9 98 121-227 43-144 (243)
193 2ih2_A Modification methylase 98.3 4.8E-07 1.6E-11 95.1 5.2 93 122-228 40-165 (421)
194 2p7i_A Hypothetical protein; p 98.3 1.1E-06 3.9E-11 84.0 7.4 95 121-227 42-141 (250)
195 2p8j_A S-adenosylmethionine-de 98.3 8E-07 2.7E-11 83.6 6.2 99 122-227 24-128 (209)
196 3fzg_A 16S rRNA methylase; met 98.3 2E-06 6.8E-11 83.8 9.0 107 122-237 50-160 (200)
197 3e8s_A Putative SAM dependent 98.3 2.5E-06 8.4E-11 80.6 9.4 97 121-229 52-154 (227)
198 1y8c_A S-adenosylmethionine-de 98.3 1E-06 3.5E-11 84.5 6.8 97 122-227 38-142 (246)
199 3ou2_A SAM-dependent methyltra 98.3 1.6E-06 5.3E-11 81.8 7.9 94 122-227 47-146 (218)
200 3e23_A Uncharacterized protein 98.3 1.2E-06 4.3E-11 82.9 7.3 92 122-227 44-141 (211)
201 1xtp_A LMAJ004091AAA; SGPP, st 98.3 7.7E-07 2.6E-11 86.3 5.7 99 121-227 93-197 (254)
202 3hnr_A Probable methyltransfer 98.2 1.2E-06 4.2E-11 83.1 7.0 95 121-227 45-145 (220)
203 1m6y_A S-adenosyl-methyltransf 98.2 1.6E-06 5.5E-11 89.2 8.3 77 122-203 27-107 (301)
204 2bm8_A Cephalosporin hydroxyla 98.2 5.2E-07 1.8E-11 88.8 4.3 99 121-227 81-187 (236)
205 3s1s_A Restriction endonucleas 98.2 1.2E-06 4E-11 100.6 7.7 109 121-229 321-467 (878)
206 3g2m_A PCZA361.24; SAM-depende 98.2 7.5E-07 2.6E-11 89.6 5.5 102 122-228 83-191 (299)
207 1pjz_A Thiopurine S-methyltran 98.2 3.9E-07 1.3E-11 87.2 3.0 100 122-225 23-138 (203)
208 2p35_A Trans-aconitate 2-methy 98.2 1.8E-06 6.1E-11 83.9 7.7 95 122-227 34-132 (259)
209 3bgv_A MRNA CAP guanine-N7 met 98.2 1.6E-06 5.3E-11 87.9 6.7 104 122-227 35-155 (313)
210 2vdw_A Vaccinia virus capping 98.2 7.8E-06 2.7E-10 83.6 11.8 110 122-234 49-176 (302)
211 3mq2_A 16S rRNA methyltransfer 98.2 1.6E-06 5.6E-11 82.6 6.3 100 122-227 28-140 (218)
212 3ujc_A Phosphoethanolamine N-m 98.2 1.1E-06 3.9E-11 85.4 5.0 98 122-227 56-159 (266)
213 2yqz_A Hypothetical protein TT 98.2 2.7E-06 9.3E-11 82.7 7.6 97 122-226 40-140 (263)
214 2i62_A Nicotinamide N-methyltr 98.2 2.6E-07 9E-12 90.0 0.4 105 121-227 56-198 (265)
215 3bkx_A SAM-dependent methyltra 98.2 4E-06 1.4E-10 82.5 8.8 103 122-227 44-159 (275)
216 2a14_A Indolethylamine N-methy 98.2 3.8E-07 1.3E-11 90.5 1.2 105 121-227 55-197 (263)
217 3pfg_A N-methyltransferase; N, 98.2 1.5E-06 5.2E-11 85.2 5.4 92 122-226 51-150 (263)
218 2r3s_A Uncharacterized protein 98.1 5.1E-06 1.8E-10 84.4 9.3 101 121-227 165-271 (335)
219 3iv6_A Putative Zn-dependent a 98.1 2.5E-06 8.4E-11 86.2 6.7 98 121-227 45-148 (261)
220 3ggd_A SAM-dependent methyltra 98.1 5E-06 1.7E-10 80.5 8.4 97 122-227 57-163 (245)
221 1ej0_A FTSJ; methyltransferase 98.1 3.4E-06 1.2E-10 75.8 6.4 92 122-227 23-136 (180)
222 2h1r_A Dimethyladenosine trans 98.1 2.8E-06 9.5E-11 86.8 6.2 81 122-211 43-124 (299)
223 1qzz_A RDMB, aclacinomycin-10- 98.1 8.6E-06 2.9E-10 84.2 9.6 99 122-227 183-287 (374)
224 2gs9_A Hypothetical protein TT 98.1 4.1E-06 1.4E-10 79.2 6.6 92 122-227 37-132 (211)
225 3p2e_A 16S rRNA methylase; met 98.1 1.9E-06 6.5E-11 84.3 4.2 101 122-226 25-138 (225)
226 3bxo_A N,N-dimethyltransferase 98.1 2.2E-06 7.5E-11 82.1 4.5 92 122-226 41-140 (239)
227 1tw3_A COMT, carminomycin 4-O- 98.0 1.1E-05 3.6E-10 83.3 8.5 99 122-227 184-288 (360)
228 4gqb_A Protein arginine N-meth 98.0 7.2E-06 2.5E-10 92.4 7.6 97 121-224 357-464 (637)
229 3dou_A Ribosomal RNA large sub 98.0 8.5E-06 2.9E-10 77.7 6.5 89 122-227 26-139 (191)
230 1zq9_A Probable dimethyladenos 97.9 7.9E-06 2.7E-10 82.7 6.1 86 122-215 29-115 (285)
231 3opn_A Putative hemolysin; str 97.9 1.2E-05 4.1E-10 79.3 7.1 138 121-279 37-179 (232)
232 3htx_A HEN1; HEN1, small RNA m 97.9 7.1E-05 2.4E-09 86.4 14.1 102 121-227 721-834 (950)
233 3ccf_A Cyclopropane-fatty-acyl 97.9 1.2E-05 4.1E-10 79.8 6.8 94 121-227 57-154 (279)
234 2nyu_A Putative ribosomal RNA 97.9 1.7E-05 5.8E-10 73.8 7.3 92 122-227 23-145 (196)
235 3ege_A Putative methyltransfer 97.9 1.2E-05 4.2E-10 79.2 6.6 92 122-227 35-130 (261)
236 3cvo_A Methyltransferase-like 97.9 5.1E-05 1.7E-09 74.0 10.6 96 122-225 31-152 (202)
237 3c6k_A Spermine synthase; sper 97.9 2.4E-05 8.4E-10 83.0 8.8 104 122-227 206-331 (381)
238 2ip2_A Probable phenazine-spec 97.9 1.5E-05 5.2E-10 81.2 7.0 98 123-227 169-272 (334)
239 3ua3_A Protein arginine N-meth 97.9 1.6E-05 5.6E-10 90.1 7.7 100 122-224 410-531 (745)
240 3cc8_A Putative methyltransfer 97.9 9.4E-06 3.2E-10 76.7 5.0 93 122-227 33-130 (230)
241 3dp7_A SAM-dependent methyltra 97.9 1.9E-05 6.7E-10 82.1 7.8 103 121-227 179-287 (363)
242 1x19_A CRTF-related protein; m 97.9 3.6E-05 1.2E-09 79.6 9.7 100 121-227 190-295 (359)
243 2avn_A Ubiquinone/menaquinone 97.8 2.5E-05 8.6E-10 76.8 7.7 93 122-227 55-152 (260)
244 2plw_A Ribosomal RNA methyltra 97.8 2.3E-05 7.8E-10 73.4 6.8 92 122-227 23-154 (201)
245 1p91_A Ribosomal RNA large sub 97.8 1.8E-05 6.2E-10 77.8 6.2 93 122-227 86-178 (269)
246 3hp7_A Hemolysin, putative; st 97.8 4.2E-05 1.4E-09 78.5 9.1 140 120-280 84-228 (291)
247 2qy6_A UPF0209 protein YFCK; s 97.8 4.2E-05 1.4E-09 76.9 8.9 105 122-226 61-212 (257)
248 3mcz_A O-methyltransferase; ad 97.8 3.9E-05 1.3E-09 78.8 8.5 102 122-227 180-287 (352)
249 3i53_A O-methyltransferase; CO 97.8 8.3E-05 2.8E-09 75.9 10.8 99 122-227 170-274 (332)
250 3gwz_A MMCR; methyltransferase 97.8 0.00011 3.8E-09 76.6 11.8 99 122-227 203-307 (369)
251 3lcv_B Sisomicin-gentamicin re 97.8 1.2E-05 4.1E-10 81.7 4.0 105 122-237 133-244 (281)
252 2c7p_A Modification methylase 97.7 3.9E-05 1.3E-09 79.7 6.7 71 121-203 10-80 (327)
253 1g55_A DNA cytosine methyltran 97.7 1.6E-05 5.4E-10 83.0 3.5 71 123-203 3-77 (343)
254 2aot_A HMT, histamine N-methyl 97.7 0.00013 4.4E-09 73.1 9.9 104 122-226 53-171 (292)
255 1vlm_A SAM-dependent methyltra 97.7 3.7E-05 1.3E-09 73.5 5.4 88 122-227 48-139 (219)
256 4azs_A Methyltransferase WBDD; 97.7 0.00012 3.9E-09 81.2 10.0 98 122-227 67-173 (569)
257 3g7u_A Cytosine-specific methy 97.6 5.4E-05 1.8E-09 80.1 6.4 71 123-203 3-80 (376)
258 3frh_A 16S rRNA methylase; met 97.6 0.00012 3.9E-09 73.7 8.3 103 121-237 105-214 (253)
259 4hg2_A Methyltransferase type 97.6 5E-05 1.7E-09 76.0 5.2 93 122-227 40-135 (257)
260 1qam_A ERMC' methyltransferase 97.6 0.00012 4.1E-09 72.3 7.8 85 122-215 31-116 (244)
261 2g72_A Phenylethanolamine N-me 97.6 3.4E-05 1.2E-09 77.0 3.8 105 121-227 71-215 (289)
262 3ufb_A Type I restriction-modi 97.5 0.00018 6E-09 79.5 9.2 108 121-231 217-366 (530)
263 3gru_A Dimethyladenosine trans 97.5 0.00026 8.8E-09 72.6 9.5 85 122-215 51-136 (295)
264 4e2x_A TCAB9; kijanose, tetron 97.5 9.6E-05 3.3E-09 77.8 6.2 98 122-229 108-210 (416)
265 2qe6_A Uncharacterized protein 97.5 0.00053 1.8E-08 68.9 10.8 99 123-227 79-196 (274)
266 1yub_A Ermam, rRNA methyltrans 97.4 3.4E-06 1.2E-10 83.0 -5.9 81 122-211 30-111 (245)
267 3fut_A Dimethyladenosine trans 97.4 0.00028 9.7E-09 71.4 7.5 85 122-216 48-133 (271)
268 2xyq_A Putative 2'-O-methyl tr 97.3 0.00017 5.9E-09 73.8 5.1 85 122-226 64-170 (290)
269 1af7_A Chemotaxis receptor met 97.3 0.00026 8.8E-09 71.8 6.1 109 122-230 106-255 (274)
270 3ftd_A Dimethyladenosine trans 97.3 0.00099 3.4E-08 66.3 10.2 84 122-215 32-117 (249)
271 2zfu_A Nucleomethylin, cerebra 97.3 0.0005 1.7E-08 65.0 7.6 81 122-227 68-151 (215)
272 3tqs_A Ribosomal RNA small sub 97.3 0.0003 1E-08 70.5 6.3 86 122-215 30-118 (255)
273 2wa2_A Non-structural protein 97.2 3.4E-05 1.2E-09 78.2 -1.0 96 121-226 82-192 (276)
274 2oxt_A Nucleoside-2'-O-methylt 97.2 3.1E-05 1.1E-09 78.0 -2.0 95 122-226 75-184 (265)
275 2wk1_A NOVP; transferase, O-me 97.1 0.00047 1.6E-08 70.4 6.3 104 122-226 107-243 (282)
276 3sso_A Methyltransferase; macr 97.1 0.00032 1.1E-08 75.3 4.9 94 121-227 216-324 (419)
277 3lst_A CALO1 methyltransferase 97.0 0.00046 1.6E-08 71.1 4.8 96 122-227 185-286 (348)
278 3p8z_A Mtase, non-structural p 96.9 0.0037 1.3E-07 62.6 10.2 120 122-255 79-215 (267)
279 2p41_A Type II methyltransfera 96.9 0.00072 2.5E-08 69.3 5.1 93 122-226 83-190 (305)
280 1g60_A Adenine-specific methyl 96.9 0.0011 3.8E-08 65.9 6.1 48 121-171 212-259 (260)
281 2qrv_A DNA (cytosine-5)-methyl 96.9 0.00088 3E-08 68.7 5.5 72 122-203 16-92 (295)
282 3ubt_Y Modification methylase 96.6 0.0016 5.6E-08 66.3 5.5 69 124-203 2-70 (331)
283 2zig_A TTHA0409, putative modi 96.5 0.0052 1.8E-07 62.2 8.3 47 121-170 235-281 (297)
284 3me5_A Cytosine-specific methy 96.5 0.0027 9.2E-08 69.4 6.1 75 122-203 88-178 (482)
285 4h0n_A DNMT2; SAH binding, tra 96.4 0.0015 5.2E-08 67.9 3.8 71 123-203 4-78 (333)
286 1wg8_A Predicted S-adenosylmet 96.4 0.0064 2.2E-07 62.2 7.7 81 122-213 23-107 (285)
287 1fp2_A Isoflavone O-methyltran 96.3 0.0048 1.6E-07 63.5 6.5 91 122-227 189-288 (352)
288 3qv2_A 5-cytosine DNA methyltr 96.3 0.0022 7.7E-08 66.6 4.0 71 122-203 10-85 (327)
289 4a6d_A Hydroxyindole O-methylt 96.3 0.0064 2.2E-07 63.0 7.4 97 122-226 180-282 (353)
290 1fp1_D Isoliquiritigenin 2'-O- 96.1 0.0046 1.6E-07 64.2 5.4 91 122-227 210-306 (372)
291 3lkz_A Non-structural protein 96.0 0.0062 2.1E-07 62.7 5.7 104 122-238 95-210 (321)
292 1qyr_A KSGA, high level kasuga 96.0 0.0038 1.3E-07 62.3 3.7 83 122-214 22-111 (252)
293 3giw_A Protein of unknown func 95.9 0.0082 2.8E-07 61.2 5.7 101 123-227 80-200 (277)
294 3reo_A (ISO)eugenol O-methyltr 95.7 0.0076 2.6E-07 62.7 4.8 91 122-227 204-300 (368)
295 1g60_A Adenine-specific methyl 95.7 0.0077 2.6E-07 59.8 4.6 52 177-228 5-75 (260)
296 3uzu_A Ribosomal RNA small sub 95.6 0.0088 3E-07 60.6 4.9 82 122-212 43-133 (279)
297 3p9c_A Caffeic acid O-methyltr 95.5 0.011 3.6E-07 61.6 5.0 91 122-227 202-298 (364)
298 2ld4_A Anamorsin; methyltransf 95.5 0.0073 2.5E-07 55.3 3.3 81 122-226 13-100 (176)
299 1zg3_A Isoflavanone 4'-O-methy 95.4 0.017 5.8E-07 59.5 6.2 91 122-227 194-293 (358)
300 1boo_A Protein (N-4 cytosine-s 95.2 0.023 8E-07 58.3 6.3 56 175-230 13-87 (323)
301 1eg2_A Modification methylase 95.2 0.022 7.5E-07 58.7 6.0 53 176-228 38-107 (319)
302 2zig_A TTHA0409, putative modi 95.2 0.023 8E-07 57.4 6.1 70 161-230 6-100 (297)
303 1boo_A Protein (N-4 cytosine-s 94.5 0.013 4.5E-07 60.2 2.4 62 121-189 252-313 (323)
304 3swr_A DNA (cytosine-5)-methyl 94.5 0.065 2.2E-06 63.3 8.4 73 121-203 539-627 (1002)
305 3vyw_A MNMC2; tRNA wobble urid 94.2 0.085 2.9E-06 54.5 7.5 105 122-227 97-226 (308)
306 3tka_A Ribosomal RNA small sub 94.1 0.061 2.1E-06 56.3 6.3 85 121-213 57-146 (347)
307 4ft4_B DNA (cytosine-5)-methyl 93.8 0.053 1.8E-06 62.0 5.6 58 122-189 212-275 (784)
308 3evf_A RNA-directed RNA polyme 93.6 0.14 4.8E-06 52.1 7.7 98 122-226 75-183 (277)
309 3av4_A DNA (cytosine-5)-methyl 93.0 0.17 5.8E-06 61.4 8.5 73 121-203 850-938 (1330)
310 4auk_A Ribosomal RNA large sub 91.9 0.2 7E-06 53.0 6.4 68 121-202 211-278 (375)
311 2k4m_A TR8_protein, UPF0146 pr 91.9 0.072 2.4E-06 49.7 2.6 83 122-226 36-120 (153)
312 1eg2_A Modification methylase 91.7 0.16 5.4E-06 52.3 5.2 47 121-170 242-291 (319)
313 3pvc_A TRNA 5-methylaminomethy 91.7 0.23 7.8E-06 55.9 6.9 106 122-227 59-211 (689)
314 3gcz_A Polyprotein; flavivirus 91.4 0.085 2.9E-06 53.8 2.7 97 122-226 91-200 (282)
315 2py6_A Methyltransferase FKBM; 91.2 0.48 1.6E-05 50.2 8.5 60 121-182 226-289 (409)
316 1pl8_A Human sorbitol dehydrog 91.1 1 3.5E-05 46.1 10.6 97 121-227 171-273 (356)
317 4dkj_A Cytosine-specific methy 90.9 0.15 5E-06 54.5 4.1 45 122-168 10-60 (403)
318 3eld_A Methyltransferase; flav 90.9 0.14 4.9E-06 52.5 3.8 97 121-226 81-190 (300)
319 3fpc_A NADP-dependent alcohol 90.6 0.49 1.7E-05 48.4 7.5 97 121-226 166-265 (352)
320 2px2_A Genome polyprotein [con 90.0 0.13 4.6E-06 51.9 2.7 90 122-226 74-182 (269)
321 3s2e_A Zinc-containing alcohol 89.8 0.67 2.3E-05 47.0 7.8 97 121-227 166-263 (340)
322 1f8f_A Benzyl alcohol dehydrog 89.6 0.83 2.8E-05 47.0 8.4 97 121-226 190-288 (371)
323 3ps9_A TRNA 5-methylaminomethy 89.4 0.63 2.1E-05 52.0 7.9 106 122-227 67-219 (676)
324 1kol_A Formaldehyde dehydrogen 89.4 0.85 2.9E-05 47.4 8.4 97 121-226 185-299 (398)
325 4ej6_A Putative zinc-binding d 89.3 0.94 3.2E-05 46.8 8.6 98 121-227 182-284 (370)
326 2dph_A Formaldehyde dismutase; 89.1 0.53 1.8E-05 49.1 6.5 97 121-226 185-298 (398)
327 3ip1_A Alcohol dehydrogenase, 88.2 1 3.5E-05 47.1 8.0 94 122-226 214-317 (404)
328 3fbg_A Putative arginate lyase 88.1 0.95 3.2E-05 46.1 7.5 95 121-226 150-247 (346)
329 3m6i_A L-arabinitol 4-dehydrog 87.6 1.9 6.7E-05 44.0 9.5 96 122-227 180-283 (363)
330 1uuf_A YAHK, zinc-type alcohol 86.4 1.6 5.4E-05 45.2 8.1 93 121-226 194-287 (369)
331 2jhf_A Alcohol dehydrogenase E 85.6 5.8 0.0002 40.6 11.9 95 121-226 191-292 (374)
332 1e3j_A NADP(H)-dependent ketos 85.5 3 0.0001 42.4 9.6 96 121-227 168-271 (352)
333 3uko_A Alcohol dehydrogenase c 85.5 2.1 7.2E-05 44.1 8.5 95 122-227 194-295 (378)
334 1p0f_A NADP-dependent alcohol 85.4 4.7 0.00016 41.3 11.1 96 121-227 191-293 (373)
335 2c0c_A Zinc binding alcohol de 85.3 2.3 7.9E-05 43.6 8.7 94 121-226 163-260 (362)
336 1e3i_A Alcohol dehydrogenase, 84.9 5.2 0.00018 41.0 11.1 96 121-227 195-297 (376)
337 2fzw_A Alcohol dehydrogenase c 84.8 5.1 0.00017 41.0 11.0 95 121-226 190-291 (373)
338 3qwb_A Probable quinone oxidor 84.5 2 6.8E-05 43.4 7.6 96 121-227 148-247 (334)
339 1cdo_A Alcohol dehydrogenase; 84.4 5.8 0.0002 40.6 11.2 95 121-226 192-293 (374)
340 3uog_A Alcohol dehydrogenase; 84.3 3.8 0.00013 42.0 9.8 94 121-227 189-287 (363)
341 1pqw_A Polyketide synthase; ro 83.9 2.3 7.9E-05 39.2 7.3 95 122-227 39-137 (198)
342 2kdx_A HYPA, hydrogenase/ureas 83.8 2.1 7.3E-05 37.6 6.6 22 255-276 3-25 (119)
343 1i4w_A Mitochondrial replicati 83.6 1.2 4.2E-05 46.5 5.7 59 122-187 59-117 (353)
344 3pi7_A NADH oxidoreductase; gr 83.6 1.2 4E-05 45.5 5.4 93 123-226 166-262 (349)
345 1vj0_A Alcohol dehydrogenase, 83.4 1.8 6.2E-05 44.7 6.9 95 122-226 196-297 (380)
346 3two_A Mannitol dehydrogenase; 83.1 1.2 4.2E-05 45.3 5.4 89 121-227 176-265 (348)
347 3jv7_A ADH-A; dehydrogenase, n 83.1 3.2 0.00011 42.0 8.5 97 121-227 171-270 (345)
348 4dvj_A Putative zinc-dependent 83.1 1.9 6.7E-05 44.3 7.0 95 122-226 172-269 (363)
349 3jyn_A Quinone oxidoreductase; 82.9 1.9 6.7E-05 43.3 6.8 96 121-227 140-239 (325)
350 3a43_A HYPD, hydrogenase nicke 82.8 2.4 8.4E-05 38.5 6.7 22 255-276 1-23 (139)
351 4a2c_A Galactitol-1-phosphate 82.8 2.6 8.9E-05 42.5 7.7 98 121-227 160-260 (346)
352 1rjw_A ADH-HT, alcohol dehydro 82.5 1.6 5.5E-05 44.3 6.0 96 121-227 164-261 (339)
353 4dup_A Quinone oxidoreductase; 82.3 2.4 8.1E-05 43.4 7.2 96 121-227 167-265 (353)
354 2h6e_A ADH-4, D-arabinose 1-de 82.3 3.2 0.00011 42.0 8.2 94 121-227 170-269 (344)
355 3eod_A Protein HNR; response r 82.0 12 0.00041 31.0 10.5 76 147-227 8-87 (130)
356 3gms_A Putative NADPH:quinone 82.0 1.5 5E-05 44.5 5.4 96 121-227 144-243 (340)
357 1wly_A CAAR, 2-haloacrylate re 81.9 3.6 0.00012 41.4 8.3 96 121-227 145-244 (333)
358 2d8a_A PH0655, probable L-thre 81.6 1.6 5.4E-05 44.4 5.6 97 121-227 167-267 (348)
359 2b5w_A Glucose dehydrogenase; 81.1 1 3.6E-05 46.0 4.0 94 123-227 174-273 (357)
360 2eih_A Alcohol dehydrogenase; 81.1 3.2 0.00011 42.0 7.6 96 121-227 166-265 (343)
361 3nx4_A Putative oxidoreductase 80.9 0.84 2.9E-05 45.8 3.1 84 130-227 157-241 (324)
362 4b7c_A Probable oxidoreductase 80.3 2.4 8.3E-05 42.7 6.4 97 121-227 149-248 (336)
363 1iz0_A Quinone oxidoreductase; 79.6 4.9 0.00017 39.8 8.3 91 121-226 125-217 (302)
364 4eye_A Probable oxidoreductase 79.1 2.9 0.0001 42.4 6.6 95 121-227 159-257 (342)
365 1qor_A Quinone oxidoreductase; 78.9 3.9 0.00013 41.0 7.4 96 121-227 140-239 (327)
366 2lcq_A Putative toxin VAPC6; P 78.0 0.82 2.8E-05 42.3 1.8 34 267-321 107-140 (165)
367 3heb_A Response regulator rece 77.8 13 0.00046 31.8 9.7 78 147-228 5-98 (152)
368 3jte_A Response regulator rece 77.5 7.4 0.00025 33.0 7.8 76 147-227 4-85 (143)
369 3cu5_A Two component transcrip 77.4 12 0.00042 31.8 9.2 77 148-227 4-85 (141)
370 4a0s_A Octenoyl-COA reductase/ 77.3 6.3 0.00021 41.5 8.7 96 121-227 220-336 (447)
371 1xa0_A Putative NADPH dependen 77.0 2.1 7.1E-05 43.0 4.6 90 124-226 152-245 (328)
372 3goh_A Alcohol dehydrogenase, 77.0 0.79 2.7E-05 46.0 1.5 84 122-226 143-228 (315)
373 3r24_A NSP16, 2'-O-methyl tran 76.8 2.6 8.8E-05 43.6 5.2 88 121-227 109-217 (344)
374 1v3u_A Leukotriene B4 12- hydr 76.7 4.4 0.00015 40.7 7.0 95 121-226 145-243 (333)
375 3h5i_A Response regulator/sens 76.5 26 0.00091 29.5 11.1 75 147-228 6-87 (140)
376 3cg4_A Response regulator rece 76.3 19 0.00065 30.2 10.1 49 147-202 8-59 (142)
377 3grc_A Sensor protein, kinase; 76.1 14 0.00048 31.0 9.2 49 147-202 7-58 (140)
378 2j3h_A NADP-dependent oxidored 74.4 3.8 0.00013 41.3 5.8 95 121-227 155-255 (345)
379 2y75_A HTH-type transcriptiona 73.9 6.1 0.00021 34.4 6.3 74 395-471 10-85 (129)
380 2j8z_A Quinone oxidoreductase; 73.7 6.1 0.00021 40.2 7.2 96 121-227 162-261 (354)
381 1yb5_A Quinone oxidoreductase; 73.2 6.8 0.00023 40.0 7.4 96 121-227 170-269 (351)
382 2vn8_A Reticulon-4-interacting 73.1 5.7 0.00019 40.8 6.9 95 121-226 183-279 (375)
383 4eez_A Alcohol dehydrogenase 1 72.1 9.1 0.00031 38.4 8.0 98 121-227 163-263 (348)
384 2dq4_A L-threonine 3-dehydroge 72.0 1.8 6.1E-05 43.9 2.7 96 121-227 164-262 (343)
385 3krt_A Crotonyl COA reductase; 71.7 14 0.00046 39.1 9.6 93 121-226 228-343 (456)
386 3ioy_A Short-chain dehydrogena 71.5 67 0.0023 32.0 14.3 79 120-202 6-95 (319)
387 3kht_A Response regulator; PSI 71.2 24 0.00082 29.7 9.5 54 147-203 6-60 (144)
388 2zb4_A Prostaglandin reductase 70.9 5.6 0.00019 40.4 6.2 96 123-227 162-260 (357)
389 3gaz_A Alcohol dehydrogenase s 70.6 11 0.00037 38.2 8.2 92 121-226 150-245 (343)
390 3rqi_A Response regulator prot 70.5 22 0.00076 31.9 9.6 76 147-227 8-87 (184)
391 3f6p_A Transcriptional regulat 70.4 27 0.00093 28.6 9.4 76 147-228 3-82 (120)
392 1qkk_A DCTD, C4-dicarboxylate 70.0 28 0.00096 29.8 9.8 77 147-228 4-84 (155)
393 2dpm_A M.dpnii 1, protein (ade 69.5 4.2 0.00014 41.1 4.8 36 123-163 37-72 (284)
394 3a10_A Response regulator; pho 69.2 27 0.00091 28.1 9.0 73 148-228 3-82 (116)
395 3hzh_A Chemotaxis response reg 69.1 13 0.00043 32.4 7.3 77 147-227 37-119 (157)
396 3gt7_A Sensor protein; structu 68.7 27 0.00092 30.1 9.4 116 147-276 8-130 (154)
397 1dbw_A Transcriptional regulat 68.6 28 0.00095 28.6 9.1 75 147-227 4-83 (126)
398 3tqh_A Quinone oxidoreductase; 67.4 10 0.00036 37.8 7.2 91 121-226 152-244 (321)
399 3h7a_A Short chain dehydrogena 67.4 45 0.0015 31.9 11.5 74 122-202 7-91 (252)
400 3tjr_A Short chain dehydrogena 67.3 61 0.0021 31.9 12.8 77 120-202 29-116 (301)
401 2rdm_A Response regulator rece 67.2 24 0.00082 29.0 8.5 75 147-228 6-88 (132)
402 1jvb_A NAD(H)-dependent alcoho 66.8 6.5 0.00022 39.8 5.6 95 121-226 170-270 (347)
403 1xg5_A ARPG836; short chain de 66.6 64 0.0022 31.0 12.6 78 120-201 30-118 (279)
404 2cdc_A Glucose dehydrogenase g 66.6 3 0.0001 42.7 3.1 92 122-226 181-277 (366)
405 2g1p_A DNA adenine methylase; 66.3 4 0.00014 41.0 3.8 35 123-162 29-63 (278)
406 1gh9_A 8.3 kDa protein (gene M 66.3 2.3 7.7E-05 34.7 1.6 31 312-362 3-33 (71)
407 3gl9_A Response regulator; bet 65.5 55 0.0019 26.8 10.5 51 147-202 3-54 (122)
408 3hdv_A Response regulator; PSI 65.2 27 0.00093 29.0 8.5 52 146-202 7-60 (136)
409 2qxy_A Response regulator; reg 65.1 16 0.00056 30.6 7.1 49 147-202 5-56 (142)
410 3nhm_A Response regulator; pro 64.7 45 0.0015 27.4 9.7 73 147-228 5-86 (133)
411 3sx2_A Putative 3-ketoacyl-(ac 64.6 1E+02 0.0035 29.5 13.7 78 119-202 10-110 (278)
412 2cf5_A Atccad5, CAD, cinnamyl 64.3 4.6 0.00016 41.2 3.9 95 121-227 180-275 (357)
413 3i42_A Response regulator rece 64.2 18 0.0006 29.8 7.0 49 147-202 4-55 (127)
414 1piw_A Hypothetical zinc-type 64.0 3.7 0.00013 41.9 3.2 93 121-227 179-276 (360)
415 3cnb_A DNA-binding response re 64.0 28 0.00096 28.9 8.3 50 147-202 9-62 (143)
416 1yqd_A Sinapyl alcohol dehydro 64.0 8.4 0.00029 39.5 5.8 95 121-227 187-282 (366)
417 2rjn_A Response regulator rece 64.0 32 0.0011 29.4 8.9 51 147-202 8-59 (154)
418 4g81_D Putative hexonate dehyd 63.8 54 0.0018 32.2 11.5 76 120-201 7-93 (255)
419 1tmy_A CHEY protein, TMY; chem 63.5 21 0.00072 28.9 7.2 73 148-227 4-83 (120)
420 3lua_A Response regulator rece 63.4 26 0.0009 29.3 8.1 76 147-227 5-89 (140)
421 3cg0_A Response regulator rece 63.3 25 0.00087 29.2 7.9 75 146-227 9-90 (140)
422 1zgz_A Torcad operon transcrip 63.0 37 0.0013 27.5 8.7 49 147-202 3-54 (122)
423 4e7p_A Response regulator; DNA 62.5 42 0.0014 28.5 9.4 77 147-227 21-102 (150)
424 3eqz_A Response regulator; str 62.4 22 0.00075 29.3 7.3 51 147-202 4-54 (135)
425 3tos_A CALS11; methyltransfera 62.3 3.5 0.00012 41.3 2.5 102 124-226 72-216 (257)
426 4dad_A Putative pilus assembly 62.3 18 0.00062 30.6 6.8 52 147-203 21-76 (146)
427 1ys7_A Transcriptional regulat 62.0 59 0.002 29.8 10.9 75 147-229 8-89 (233)
428 2pl1_A Transcriptional regulat 61.7 43 0.0015 26.9 8.9 73 148-228 2-81 (121)
429 3cz5_A Two-component response 61.3 32 0.0011 29.3 8.4 78 147-228 6-88 (153)
430 3crn_A Response regulator rece 61.2 34 0.0012 28.5 8.3 49 147-202 4-55 (132)
431 2hcy_A Alcohol dehydrogenase 1 61.1 13 0.00045 37.5 6.6 97 121-227 169-269 (347)
432 3gqv_A Enoyl reductase; medium 61.0 27 0.00094 35.6 9.1 95 121-226 164-262 (371)
433 1k66_A Phytochrome response re 60.6 24 0.00083 29.5 7.3 54 147-202 7-70 (149)
434 3ucx_A Short chain dehydrogena 60.2 1.1E+02 0.0038 29.2 12.9 77 120-202 9-96 (264)
435 2apo_B Ribosome biogenesis pro 60.0 4.3 0.00015 32.0 2.1 34 312-369 5-38 (60)
436 1tt7_A YHFP; alcohol dehydroge 59.9 6.7 0.00023 39.3 4.1 89 124-226 153-246 (330)
437 3eul_A Possible nitrate/nitrit 59.9 23 0.0008 30.2 7.2 120 146-280 15-141 (152)
438 3kto_A Response regulator rece 59.8 19 0.00065 30.2 6.5 51 147-202 7-58 (136)
439 3lf2_A Short chain oxidoreduct 59.8 1.2E+02 0.0042 28.9 13.5 78 120-202 6-95 (265)
440 1k68_A Phytochrome response re 59.6 44 0.0015 27.4 8.7 53 147-202 3-63 (140)
441 1mvo_A PHOP response regulator 59.4 32 0.0011 28.5 7.8 73 147-227 4-83 (136)
442 3rkr_A Short chain oxidoreduct 59.4 1.2E+02 0.0042 28.8 14.6 77 120-202 27-114 (262)
443 3r0j_A Possible two component 59.4 27 0.00093 33.0 8.2 77 147-229 24-105 (250)
444 3hdg_A Uncharacterized protein 59.3 49 0.0017 27.4 9.0 49 147-202 8-59 (137)
445 3h1g_A Chemotaxis protein CHEY 59.0 45 0.0016 27.5 8.7 51 147-202 6-59 (129)
446 3o38_A Short chain dehydrogena 58.5 1.2E+02 0.004 28.8 12.7 79 119-202 19-109 (266)
447 1yio_A Response regulatory pro 58.4 40 0.0014 30.4 8.9 76 147-228 5-85 (208)
448 3hv2_A Response regulator/HD d 58.2 58 0.002 27.7 9.5 73 147-227 15-94 (153)
449 1s8n_A Putative antiterminator 57.9 58 0.002 29.4 9.9 77 147-230 14-96 (205)
450 4eso_A Putative oxidoreductase 57.9 69 0.0024 30.6 10.9 74 120-202 6-90 (255)
451 2qr3_A Two-component system re 57.7 27 0.00094 29.0 7.1 75 147-228 4-89 (140)
452 3k69_A Putative transcription 57.5 9.3 0.00032 35.2 4.3 58 413-471 28-87 (162)
453 3snk_A Response regulator CHEY 57.1 24 0.00081 29.5 6.6 75 147-227 15-95 (135)
454 2a9o_A Response regulator; ess 56.8 59 0.002 25.9 8.8 73 148-228 3-81 (120)
455 2zay_A Response regulator rece 56.7 16 0.00053 31.0 5.4 49 147-202 9-60 (147)
456 2aus_D NOP10, ribosome biogene 56.6 5.2 0.00018 31.6 2.0 34 312-369 4-37 (60)
457 3kcn_A Adenylate cyclase homol 56.2 31 0.001 29.5 7.3 73 147-227 5-84 (151)
458 1lko_A Rubrerythrin all-iron(I 55.9 6.5 0.00022 37.4 3.0 28 311-358 153-180 (191)
459 2b4a_A BH3024; flavodoxin-like 55.7 35 0.0012 28.4 7.5 52 146-202 15-68 (138)
460 2qsj_A DNA-binding response re 55.4 58 0.002 27.6 9.0 50 148-202 5-58 (154)
461 4imr_A 3-oxoacyl-(acyl-carrier 55.0 1.2E+02 0.0042 29.3 12.3 77 119-202 30-117 (275)
462 4fgs_A Probable dehydrogenase 54.7 27 0.00092 34.9 7.5 56 119-184 26-84 (273)
463 3ilh_A Two component response 54.6 34 0.0012 28.5 7.2 54 146-202 9-68 (146)
464 3t6k_A Response regulator rece 54.5 56 0.0019 27.3 8.6 49 147-202 5-56 (136)
465 1srr_A SPO0F, sporulation resp 54.4 34 0.0012 27.9 7.0 49 147-202 4-55 (124)
466 3pk0_A Short-chain dehydrogena 54.3 1.5E+02 0.0051 28.2 15.5 78 120-202 8-96 (262)
467 2r25_B Osmosensing histidine p 54.2 50 0.0017 27.5 8.3 76 148-228 4-90 (133)
468 3t8r_A Staphylococcus aureus C 54.1 11 0.00039 33.8 4.2 58 413-471 28-87 (143)
469 3gaf_A 7-alpha-hydroxysteroid 53.8 1.3E+02 0.0046 28.5 12.2 77 120-202 10-97 (256)
470 3fwz_A Inner membrane protein 53.8 61 0.0021 28.0 8.9 91 129-230 12-108 (140)
471 2qzj_A Two-component response 53.8 34 0.0012 28.8 7.1 74 147-228 5-84 (136)
472 1ylf_A RRF2 family protein; st 53.4 9.3 0.00032 34.4 3.6 56 413-470 30-87 (149)
473 1twf_L ABC10-alpha, DNA-direct 53.2 6.7 0.00023 31.8 2.2 12 310-321 25-36 (70)
474 3t7c_A Carveol dehydrogenase; 52.6 1.4E+02 0.0048 29.2 12.4 77 119-201 25-124 (299)
475 1gu7_A Enoyl-[acyl-carrier-pro 52.6 12 0.00041 37.9 4.7 96 123-226 169-274 (364)
476 1xhl_A Short-chain dehydrogena 52.5 1.8E+02 0.006 28.5 13.8 80 120-202 24-114 (297)
477 3rih_A Short chain dehydrogena 52.5 1.3E+02 0.0046 29.5 12.2 79 119-202 38-127 (293)
478 1jbe_A Chemotaxis protein CHEY 51.9 79 0.0027 25.6 9.0 51 148-202 6-57 (128)
479 3b2n_A Uncharacterized protein 51.5 53 0.0018 27.2 7.9 51 147-202 4-57 (133)
480 4dzz_A Plasmid partitioning pr 51.4 17 0.00057 33.1 5.0 82 135-227 22-106 (206)
481 1dcf_A ETR1 protein; beta-alph 51.1 1E+02 0.0035 25.3 9.7 51 147-202 8-58 (136)
482 3ek2_A Enoyl-(acyl-carrier-pro 51.0 1.2E+02 0.004 28.7 11.2 76 119-201 11-99 (271)
483 3oec_A Carveol dehydrogenase ( 50.6 1.8E+02 0.0062 28.7 13.0 78 119-202 43-143 (317)
484 1xhf_A DYE resistance, aerobic 50.3 75 0.0026 25.6 8.5 49 147-202 4-55 (123)
485 3c3m_A Response regulator rece 49.4 64 0.0022 26.9 8.1 49 147-202 4-55 (138)
486 1yf3_A DNA adenine methylase; 49.1 6.4 0.00022 39.0 1.8 34 123-162 26-59 (259)
487 3pwf_A Rubrerythrin; non heme 48.7 12 0.00041 35.0 3.6 13 311-323 136-148 (170)
488 3lte_A Response regulator; str 48.6 89 0.0031 25.4 8.9 49 147-202 7-58 (132)
489 2j48_A Two-component sensor ki 48.5 64 0.0022 25.3 7.6 49 147-202 2-53 (119)
490 2heo_A Z-DNA binding protein 1 48.4 24 0.00084 27.4 4.8 42 398-443 14-55 (67)
491 3f6c_A Positive transcription 48.1 1E+02 0.0034 25.2 9.1 74 148-227 3-82 (134)
492 1kgs_A DRRD, DNA binding respo 48.0 59 0.002 29.6 8.3 74 148-229 4-84 (225)
493 3iup_A Putative NADPH:quinone 47.7 9.3 0.00032 39.4 2.9 88 121-218 170-262 (379)
494 3h0g_L DNA-directed RNA polyme 47.5 9.1 0.00031 30.5 2.1 33 309-360 17-49 (63)
495 3cfy_A Putative LUXO repressor 47.4 55 0.0019 27.4 7.4 48 148-202 6-56 (137)
496 3m6m_D Sensory/regulatory prot 47.3 37 0.0012 28.9 6.3 49 147-202 15-66 (143)
497 3pgx_A Carveol dehydrogenase; 47.2 1.3E+02 0.0045 28.9 11.0 78 119-202 12-113 (280)
498 1dz3_A Stage 0 sporulation pro 47.2 53 0.0018 27.0 7.2 49 148-202 4-56 (130)
499 3k31_A Enoyl-(acyl-carrier-pro 47.1 1.3E+02 0.0044 29.4 11.1 78 119-202 27-116 (296)
500 4esj_A Type-2 restriction enzy 46.6 5.3 0.00018 39.7 0.8 34 314-361 35-68 (257)
No 1
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=100.00 E-value=5.3e-92 Score=750.95 Aligned_cols=370 Identities=27% Similarity=0.460 Sum_probs=342.2
Q ss_pred eEEEeeeEEEEecCC-------CCccccccchhhhhHHHHHHHHHHHHhHHHHHHhhhhccCCCCCCCccCCCCCCCCcc
Q 047386 8 TIIKEGEAEILMHAK-------NEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTTSAPKASEKDGEEEAPDES 80 (581)
Q Consensus 8 ~~i~EG~a~I~~p~~-------~~VFYNPvq~fNRDlSV~vi~~f~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 80 (581)
++|+||.++|.+|.. ..|||||.|++|||+++++++.|...++
T Consensus 2 ~~i~E~g~~~~v~~~~~~~~~~~~~Ffn~~~~~nR~l~~~~~~~~~~~~~------------------------------ 51 (392)
T 3axs_A 2 EIVQEGIAKIIVPEIPKTVSSDMPVFYNPRMRVNRDLAVLGLEYLCKKLG------------------------------ 51 (392)
T ss_dssp EEEEETTEEEEECCCCSSCCTTCCSSCCGGGHHHHHHHHHHHHHHHHHHC------------------------------
T ss_pred eEEEECCEEEEEecccccccCCCCEEEcCCcHHHHHHHHHHHHHHhhccC------------------------------
Confidence 579999999999864 4799999999999999999998753210
Q ss_pred ccccCCCCCcCCcccccCCCCccccccccCccchhcccCCCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHH
Q 047386 81 VVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVE 160 (581)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave 160 (581)
.+.+|||+|||||++||++|++.+||.+|++||+|+.|++
T Consensus 52 ----------------------------------------~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~ 91 (392)
T 3axs_A 52 ----------------------------------------RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIE 91 (392)
T ss_dssp ----------------------------------------SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHH
T ss_pred ----------------------------------------CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHH
Confidence 1348999999999999999998778999999999999999
Q ss_pred HHHHHHHHhCCCCCCc-EEEEehhHHHHHh-hCCCcccEEeeCCCCCChHhHHHHHHhccCCCeEEEEeccchhhcCCCc
Q 047386 161 ACRRNIKFNGSVACSK-VESHLADARVYML-THPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNG 238 (581)
Q Consensus 161 ~i~~Ni~~N~~~~~~~-v~v~~~DA~~~l~-~~~~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~ 238 (581)
.+++|+++|+++ ++ ++++++||+.+|. ....+||+|++||||++.+|++.|+++|++||+|++||||+++|||+.+
T Consensus 92 ~~~~N~~~Ngl~--~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP~g~~~~~l~~a~~~Lk~gGll~~t~t~~~~l~g~~~ 169 (392)
T 3axs_A 92 IMKENFKLNNIP--EDRYEIHGMEANFFLRKEWGFGFDYVDLDPFGTPVPFIESVALSMKRGGILSLTATDTAPLSGTYP 169 (392)
T ss_dssp HHHHHHHHTTCC--GGGEEEECSCHHHHHHSCCSSCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEECCHHHHTTSSH
T ss_pred HHHHHHHHhCCC--CceEEEEeCCHHHHHHHhhCCCCcEEEECCCcCHHHHHHHHHHHhCCCCEEEEEecchhhhccccH
Confidence 999999999996 45 9999999999997 6556899999999999989999999999999999999999999999999
Q ss_pred chhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCCceEEEeecccCceEEEEEEEEcChhhhccccccceEEEEcCC
Q 047386 239 EVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMKSTPLKLSYVYQCIG 318 (581)
Q Consensus 239 ~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r~i~Plls~s~dhY~RvfVrV~~~~~~~k~~~~k~g~v~~C~~ 318 (581)
..|+|+||..|.+.+|+||+++|++|+.++++|+++++.|+|+||++.|||+||||||.+|+.+++++++++||+|||++
T Consensus 170 ~~~~rkYg~~p~r~~~~~e~~~r~~L~~~~~~a~~~~~~i~P~l~~~~~~y~Rv~vrv~~~~~~~~~~~~~~g~v~~C~~ 249 (392)
T 3axs_A 170 KTCMRRYMARPLRNEFKHEVGIRILIKKVIELAAQYDIAMIPIFAYSHLHYFKLFFVKERGVEKVDKLIEQFGYIQYCFN 249 (392)
T ss_dssp HHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEECHHHHHHHHTTEEEEEECTT
T ss_pred HHHHHHhCCcccccccccchhHHHHHHHHHHhcccCCCeEEeeEEEEeCcEEEEEEEEecCHHHHHHHHHhcceEEECCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCcccccccccccCCCCHHHHHHHHHHhhhcccCCCcHHHHHH
Q 047386 319 CDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKSMKDRYPAYDRISA 398 (581)
Q Consensus 319 C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~~~~~GPlW~GpLhd~~fv~~ml~~~~~~~~~~~t~~ri~~ 398 (581)
|++|+++.. . +.++..|++||++++++||||+|||||++||++||+.+++. .|+| +|+.+
T Consensus 250 C~~~~~~~~----------------~-~~~~~~C~~cg~~~~~~GPlW~g~l~d~~fv~~~l~~~~~~--~~~~-~~~~~ 309 (392)
T 3axs_A 250 CMNREVVTD----------------L-YKFKEKCPHCGSKFHIGGPLWIGKLWDEEFTNFLYEEAQKR--EEIE-KETKR 309 (392)
T ss_dssp TCCEEEECC----------------G-GGCCSBCTTTCSBCEEEEEEECSCSCCHHHHHHHHHHHHTC--TTSC-HHHHH
T ss_pred CCCeEeecC----------------C-CCCCCcCCCCCCccceecccccCcCCCHHHHHHHHHHhhhc--ccch-HHHHH
Confidence 999887511 1 23567899999999999999999999999999999998753 4778 99999
Q ss_pred HHHHHHhhCCCCCc--eeeHHHHhhhcCCCCC-CHHHHHHHHHHCCceEEecccCCCccccCCCHHHHHHHHHHHHHhCC
Q 047386 399 VLTTISEELPDVPL--FLSLHNLCSTLKCTSP-SAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWDIMRCWVKNHP 475 (581)
Q Consensus 399 lL~~~~eEl~~~P~--yy~l~~l~~~lk~~~P-~~~~~~~aL~~~GY~aSrTH~~p~~iKTdAP~~~i~di~r~w~~~~p 475 (581)
||+++.+|+ +.|+ ||++|+||+++|+++| +++.|+ +||+||+||++|+|||||||+++||||||+|++++.
T Consensus 310 lL~~~~~E~-~~p~~~~y~~~~l~~~~~~~~p~~~~~~~-----~Gy~~s~tH~~p~~iKTdAp~~~i~~i~~~~~~~~~ 383 (392)
T 3axs_A 310 ILKLIKEES-QLQTVGFYVLSKLAEKVKLPAQPPIRIAV-----KFFNGVRTHFVGDGFRTNLSFEEVMKKMEELKEKQK 383 (392)
T ss_dssp HHHHHHHHH-TSCCSSCEEHHHHHHHHTCSCCCCHHHHH-----HHTTCEECTTSTTEEECSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh-cCCccceEcHHHHHHHcCCCCCCCHHHHh-----cCcEEEeeccCCCcEeccCCHHHHHHHHHHHHHhch
Confidence 999999999 6898 9999999999999999 999999 999999999999999999999999999999998643
No 2
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=100.00 E-value=1.3e-84 Score=690.90 Aligned_cols=356 Identities=34% Similarity=0.569 Sum_probs=326.2
Q ss_pred CceEEEeeeEEEEecCC-----CCccccccchhhhhHHHHHHHHHHHHhHHHHHHhhhhccCCCCCCCccCCCCCCCCcc
Q 047386 6 DYTIIKEGEAEILMHAK-----NEVFYNKTQVNNRDISIAVMRAFISKRNQEHEAMLSKRTTSAPKASEKDGEEEAPDES 80 (581)
Q Consensus 6 ~~~~i~EG~a~I~~p~~-----~~VFYNPvq~fNRDlSV~vi~~f~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~ 80 (581)
+|++|+||.++|++|.. .+|||||.|++|||+++++++++
T Consensus 2 ~~~~~~Eg~~~~~~p~~~~~~~~~~F~np~~~~nr~l~~~~l~~~----------------------------------- 46 (378)
T 2dul_A 2 ELIEVQEGKAKILIPKAESIYDSPVFYNPRMALNRDIVVVLLNIL----------------------------------- 46 (378)
T ss_dssp -CEEEEETTEEEEEC--------CCCCCGGGHHHHHHHHHHHHHH-----------------------------------
T ss_pred CceEEEeCcEEEEecCccccCCCCceeCCchHHHHHHHHHHHHHc-----------------------------------
Confidence 37899999999999874 37999999999999999999753
Q ss_pred ccccCCCCCcCCcccccCCCCccccccccCccchhcccCCCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHH
Q 047386 81 VVNENSNGEIERPAEISQDEPCCISEEAVKPTERNVLRQLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVE 160 (581)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave 160 (581)
.+.+|||+|||||++||++|+++ ++.+|++||+|+.|++
T Consensus 47 ----------------------------------------~~~~VLDl~aGtG~~~l~~a~~~-~~~~V~avDi~~~av~ 85 (378)
T 2dul_A 47 ----------------------------------------NPKIVLDALSATGIRGIRFALET-PAEEVWLNDISEDAYE 85 (378)
T ss_dssp ----------------------------------------CCSEEEESSCTTSHHHHHHHHHS-SCSEEEEEESCHHHHH
T ss_pred ----------------------------------------CCCEEEECCCchhHHHHHHHHhC-CCCeEEEEECCHHHHH
Confidence 03479999999999999999986 4557999999999999
Q ss_pred HHHHHHHHh---------------CCCCCCcEEEEehhHHHHHhhCCCcccEEeeCCCCCChHhHHHHHHhccCCCeEEE
Q 047386 161 ACRRNIKFN---------------GSVACSKVESHLADARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMC 225 (581)
Q Consensus 161 ~i~~Ni~~N---------------~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~v 225 (581)
.+++|++.| ++. +++++++|++.++......||+|++||||++.+|++.|+++|++||+|++
T Consensus 86 ~a~~N~~~n~~~~~~~~~~~~~~~gl~---~i~v~~~Da~~~~~~~~~~fD~I~lDP~~~~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 86 LMKRNVMLNFDGELRESKGRAILKGEK---TIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp HHHHHHHHHCCSCCEECSSEEEEESSS---EEEEEESCHHHHHHHSTTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHHhcccccccccccccccCCC---ceEEEcCcHHHHHHhccCCCCEEEeCCCCCHHHHHHHHHHhcCCCCEEEE
Confidence 999999999 774 48999999999997655689999999999999999999999999999999
Q ss_pred EeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCCceEEEeecccCceEEEEEEEEcChhhhcc
Q 047386 226 TATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMKS 305 (581)
Q Consensus 226 TaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r~i~Plls~s~dhY~RvfVrV~~~~~~~k~ 305 (581)
||||+++||+.++..|+++||..|.+.+|+||+++|++|..+++.|+++|+.|.|+++++.+||+|++|||++|+.++++
T Consensus 163 t~td~~~l~~~~~~~~~~~yg~~p~~~~~~~e~~~ri~l~~~~~~~~~~g~~i~P~~~~~~~~y~rv~vrv~~g~~~~~~ 242 (378)
T 2dul_A 163 TATDGAPLCGAHPRACLRKYLAVPLRGELCHEVGTRILVGVIARYAAKYDLGIDVILAYYKDHYFRAFVKLKDGARKGDE 242 (378)
T ss_dssp EECCHHHHTTSSHHHHHHHHSSBCCCSTTHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEETTEEEEEEEEEESHHHHHH
T ss_pred EeecchhhccccHHHHHHHccCCCcccccccchhHHHHHHHHHHhcCcCCcEEEEEEEEecCCEEEEEEEEecCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEEEcCCCCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCcccccccccccCCCCHHHHHHHHHHhhh
Q 047386 306 TPLKLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGPIWSGRIHDQEWVNSILGEVKS 385 (581)
Q Consensus 306 ~~~k~g~v~~C~~C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~~~~~GPlW~GpLhd~~fv~~ml~~~~~ 385 (581)
+++++|||+||.+|++|++|+ +| +|. | +.. +||||+|||||++||++||+.++.
T Consensus 243 ~~~~~g~v~~C~~c~~~~~~~------------~~----~~~----~---~~~---~GPlw~g~l~d~~f~~~~l~~~~~ 296 (378)
T 2dul_A 243 TLEKLGYIYFDDKTGKFELEQ------------GF----LPT----R---PNA---YGPVWLGPLKDEKIVSKMVKEAES 296 (378)
T ss_dssp HHTTEEEEEECTTTCCEEEEE------------SS----SCC----S---SSC---EEEEECSCSBCHHHHHHHHHHHHT
T ss_pred HHHhcceEEECCCCCCEEeec------------cc----CCC----C---CCC---cCCCccCCCCCHHHHHHHHHHhhh
Confidence 999999999999999999885 01 221 1 111 999999999999999999998754
Q ss_pred cccCCCcHHHHHHHHHHHHhhCCCCCceeeHHHHhhhcCCCCCCHHHHHHHHHHCCceEEecccCCCccccCCCHHHHHH
Q 047386 386 MKDRYPAYDRISAVLTTISEELPDVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGVIWD 465 (581)
Q Consensus 386 ~~~~~~t~~ri~~lL~~~~eEl~~~P~yy~l~~l~~~lk~~~P~~~~~~~aL~~~GY~aSrTH~~p~~iKTdAP~~~i~d 465 (581)
. .|++.+|+.+||+++.+|+ +.|+||++|+||+++|+++|+++.|+++|+++||+||||||+|+|||||||+++||+
T Consensus 297 ~--~~~~~~~~~~ll~~~~~E~-~~p~~y~~~~~~~~~~~~~p~~~~~~~~L~~~Gy~~s~tH~~p~~ikTdAp~~~i~~ 373 (378)
T 2dul_A 297 L--SLARKKQALKLLKMIDQEL-DIPLFYDTHAIGRRLKIETKKVEEIISALREQGYEATRTHFSPTGIKTSAPYEVFIE 373 (378)
T ss_dssp S--CCTTHHHHHHHHHHHHHSC-CSSCCEEHHHHHHHHTCCBCCHHHHHHHHHHTTCCEEEETTEEEEEEESSCHHHHHH
T ss_pred c--ccchHHHHHHHHHHHHHhc-CCCcEEeHHHHHHHcCCCCCCHHHHHHHHHHCCCEEEeeecCCCcEecCCCHHHHHH
Confidence 3 4888999999999999998 689999999999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 047386 466 IMRC 469 (581)
Q Consensus 466 i~r~ 469 (581)
|||.
T Consensus 374 i~~~ 377 (378)
T 2dul_A 374 TIKR 377 (378)
T ss_dssp HHBC
T ss_pred HHhh
Confidence 9973
No 3
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.79 E-value=1.3e-18 Score=177.82 Aligned_cols=100 Identities=18% Similarity=0.211 Sum_probs=91.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
|.+|||+|||+|.+||.+|+. |+.+|+++|+||.|++++++|+++|++. ++++++++|++.++. ...||.|++|
T Consensus 126 g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~--~~v~~~~~D~~~~~~--~~~~D~Vi~~ 199 (278)
T 3k6r_A 126 DELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVE--DRMSAYNMDNRDFPG--ENIADRILMG 199 (278)
T ss_dssp TCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCTTTCCC--CSCEEEEEEC
T ss_pred CCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEeCcHHHhcc--ccCCCEEEEC
Confidence 558999999999999999995 7889999999999999999999999997 789999999998875 4579999999
Q ss_pred CCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+.++..|++.|+++|++||+|.+.+
T Consensus 200 ~p~~~~~~l~~a~~~lk~gG~ih~~~ 225 (278)
T 3k6r_A 200 YVVRTHEFIPKALSIAKDGAIIHYHN 225 (278)
T ss_dssp CCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCcHHHHHHHHHHHcCCCCEEEEEe
Confidence 88777899999999999999998754
No 4
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.72 E-value=1e-16 Score=169.91 Aligned_cols=138 Identities=16% Similarity=0.186 Sum_probs=112.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCC-cEEEEehhHHHHHhh---CCCcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS-KVESHLADARVYMLT---HPKEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~-~v~v~~~DA~~~l~~---~~~~fDv 197 (581)
+.+|||+|||||.+++.+|+ .|+.+|+++|+|+.|++.+++|++.|++. + +++++++|+..++.. ...+||+
T Consensus 213 ~~~VLDl~cGtG~~sl~la~--~ga~~V~~vD~s~~al~~A~~N~~~n~~~--~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAM--GGAMATTSVDLAKRSRALSLAHFEANHLD--MANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHH--TTBSEEEEEESCTTHHHHHHHHHHHTTCC--CTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEEeeccCHHHHHHHH--CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ccceEEEECCHHHHHHHHHHhCCCccE
Confidence 34899999999999999998 48889999999999999999999999985 3 799999999998753 2458999
Q ss_pred EeeCCCCCC-------------hHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHH
Q 047386 198 VDLDPYGSP-------------SVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILL 264 (581)
Q Consensus 198 IdLDPyGs~-------------~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill 264 (581)
|++||+... ..++..+.+.|++||+|++++ |. +.++...+.
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~------~~--------------------~~~~~~~~~ 342 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIAST------NA--------------------ANMTVSQFK 342 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEE------CC--------------------TTSCHHHHH
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe------CC--------------------CcCCHHHHH
Confidence 999995421 125567789999999999986 42 225667788
Q ss_pred HHHHHHHHHcCCceEEEeecccCce
Q 047386 265 ACIESHANRYKRYIEPVLSVQMDFY 289 (581)
Q Consensus 265 ~~i~~~Aa~~~r~i~Plls~s~dhY 289 (581)
..+..+|.++|+.+....+.+.||+
T Consensus 343 ~~i~~~~~~~g~~~~~~~~~~~D~p 367 (385)
T 2b78_A 343 KQIEKGFGKQKHTYLDLQQLPSDFA 367 (385)
T ss_dssp HHHHHHHTTCCCEEEEEECCCTTSC
T ss_pred HHHHHHHHHcCCcEEEeCCCCCCCC
Confidence 8999999999988765666666664
No 5
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.69 E-value=4.2e-16 Score=166.15 Aligned_cols=142 Identities=23% Similarity=0.235 Sum_probs=112.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+|||||.+++.+|.. |+. |+++|+|+.+++.+++|++.|++. . ++.++|++.++......||+|++|
T Consensus 215 g~~VLDlg~GtG~~sl~~a~~--ga~-V~avDis~~al~~a~~n~~~ng~~--~--~~~~~D~~~~l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAARK--GAY-ALAVDKDLEALGVLDQAALRLGLR--V--DIRHGEALPTLRGLEGPFHHVLLD 287 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHHT--TCE-EEEEESCHHHHHHHHHHHHHHTCC--C--EEEESCHHHHHHTCCCCEEEEEEC
T ss_pred CCeEEEcccchhHHHHHHHHc--CCe-EEEEECCHHHHHHHHHHHHHhCCC--C--cEEEccHHHHHHHhcCCCCEEEEC
Confidence 458999999999999999984 777 999999999999999999999986 2 456999999986544449999999
Q ss_pred CCCCC-------------hHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHH
Q 047386 202 PYGSP-------------SVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIE 268 (581)
Q Consensus 202 PyGs~-------------~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~ 268 (581)
|+... ..++..++++|++||+|.+.+ |... +....+...+.
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s------~s~~--------------------~~~~~f~~~v~ 341 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSS------CSYH--------------------LRLEDLLEVAR 341 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEE------CCTT--------------------SCHHHHHHHHH
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE------CCCC--------------------CCHHHHHHHHH
Confidence 96422 267888999999999998665 5322 44557788888
Q ss_pred HHHHHcCCceEEE--eeccc----------CceEE-EEEEE
Q 047386 269 SHANRYKRYIEPV--LSVQM----------DFYVR-VFVRI 296 (581)
Q Consensus 269 ~~Aa~~~r~i~Pl--ls~s~----------dhY~R-vfVrV 296 (581)
+++.+.++.++.+ +..+. ..|++ +++||
T Consensus 342 ~a~~~~g~~~~i~~~~~~~~DhP~~~~~pe~~yLK~~~~~v 382 (393)
T 4dmg_A 342 RAAADLGRRLRVHRVTYQPEDHPWSLHIPESLYLKTLVLQD 382 (393)
T ss_dssp HHHHHHTCCEEEEEEEECCTTSCEETTCGGGCCCEEEEEEE
T ss_pred HHHHHhCCeEEEEEEcCCCCCCCcCCCCCCcCCcEEEEEEE
Confidence 9999999988854 34444 45666 55555
No 6
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.65 E-value=1.6e-15 Score=153.22 Aligned_cols=128 Identities=16% Similarity=0.179 Sum_probs=105.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||++||||.+++.+|+. |+.+|+++|+|+.+++.+++|++.|++. ++++++++|+..++. ...||+|++|
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~--~~~~V~~vD~s~~~~~~a~~n~~~n~~~--~~v~~~~~D~~~~~~--~~~fD~Vi~~ 199 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVE--DRMSAYNMDNRDFPG--ENIADRILMG 199 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCTTTCCC--CSCEEEEEEC
T ss_pred CCEEEEecccCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEECCHHHhcc--cCCccEEEEC
Confidence 458999999999999999985 6668999999999999999999999996 579999999998875 5689999999
Q ss_pred CCCCChHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCCceEE
Q 047386 202 PYGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEP 280 (581)
Q Consensus 202 PyGs~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r~i~P 280 (581)
|+.....+++.+.++|++||+|++.+ |+... ......+..+...+.+.|+.++.
T Consensus 200 ~p~~~~~~l~~~~~~LkpgG~l~~~~------~~~~~-------------------~~~~~~~~~i~~~~~~~G~~~~~ 253 (278)
T 2frn_A 200 YVVRTHEFIPKALSIAKDGAIIHYHN------TVPEK-------------------LMPREPFETFKRITKEYGYDVEK 253 (278)
T ss_dssp CCSSGGGGHHHHHHHEEEEEEEEEEE------EEEGG-------------------GTTTTTHHHHHHHHHHTTCEEEE
T ss_pred CchhHHHHHHHHHHHCCCCeEEEEEE------eeccc-------------------cccccHHHHHHHHHHHcCCeeEE
Confidence 98777789999999999999999875 32100 00012345667888899998887
No 7
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.64 E-value=6.5e-15 Score=153.41 Aligned_cols=129 Identities=16% Similarity=0.237 Sum_probs=104.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---CCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH---PKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~---~~~fDvI 198 (581)
+.+|||++||||.+++.+++ .|+ +|+++|+|+.+++.+++|++.|++.. .+++++++|+..++... ..+||+|
T Consensus 154 ~~~VLDlgcGtG~~sl~la~--~ga-~V~~VD~s~~al~~a~~n~~~~gl~~-~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAA--AGA-EVTHVDASKKAIGWAKENQVLAGLEQ-APIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHH--TTC-EEEEECSCHHHHHHHHHHHHHHTCTT-SCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCcEEEcccccCHHHHHHHH--cCC-EEEEEECCHHHHHHHHHHHHHcCCCc-cceEEEECcHHHHHHHHHhcCCCceEE
Confidence 34899999999999999998 477 99999999999999999999999851 25899999999987531 4589999
Q ss_pred eeCCC--CCC------------hHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHH
Q 047386 199 DLDPY--GSP------------SVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILL 264 (581)
Q Consensus 199 dLDPy--Gs~------------~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill 264 (581)
++||+ +.. ..++..+.++|++||+|+++++ | .+.+....+.
T Consensus 230 i~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~-----~--------------------~~~~~~~~~~ 284 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTA-----Y--------------------SIRASFYSMH 284 (332)
T ss_dssp EECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEE-----C--------------------CTTSCHHHHH
T ss_pred EECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEEC-----C--------------------CCCCCHHHHH
Confidence 99995 321 3678888999999999888752 1 1223455677
Q ss_pred HHHHHHHHHcCCceE
Q 047386 265 ACIESHANRYKRYIE 279 (581)
Q Consensus 265 ~~i~~~Aa~~~r~i~ 279 (581)
..+.+++.+.|+.++
T Consensus 285 ~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 285 ELMRETMRGAGGVVA 299 (332)
T ss_dssp HHHHHHTTTSCSEEE
T ss_pred HHHHHHHHHcCCeEE
Confidence 778888888888776
No 8
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.64 E-value=6.2e-15 Score=156.15 Aligned_cols=137 Identities=27% Similarity=0.336 Sum_probs=109.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCC-CCCCcEEEEehhHHHHHhhC---CCcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGS-VACSKVESHLADARVYMLTH---PKEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~-~~~~~v~v~~~DA~~~l~~~---~~~fDv 197 (581)
+.+|||+|||||.+++.+|+. |+.+|+++|+|+.|++.+++|++.|++ . ++++++++|+..++... ..+||+
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~--~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDL--SKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCG--GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCc--cceEEEECCHHHHHHHHHhcCCCCCE
Confidence 348999999999999999984 788999999999999999999999998 5 47999999999987532 458999
Q ss_pred EeeCCCCC-------------ChHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHH
Q 047386 198 VDLDPYGS-------------PSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILL 264 (581)
Q Consensus 198 IdLDPyGs-------------~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill 264 (581)
|++||+.. ...++..+++.|++||+|++++ |... ++...+.
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~------~~~~--------------------~~~~~~~ 350 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFS------CSGL--------------------MTSDLFQ 350 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEE------CCTT--------------------CCHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe------CCCc--------------------CCHHHHH
Confidence 99999531 1267788999999999999987 4322 3344667
Q ss_pred HHHHHHHHHcCCceEEE--eecccCc
Q 047386 265 ACIESHANRYKRYIEPV--LSVQMDF 288 (581)
Q Consensus 265 ~~i~~~Aa~~~r~i~Pl--ls~s~dh 288 (581)
..+..++.+.|+.++.+ .....||
T Consensus 351 ~~i~~~~~~~g~~~~~i~~~~~~~d~ 376 (396)
T 3c0k_A 351 KIIADAAIDAGRDVQFIEQFRQAADH 376 (396)
T ss_dssp HHHHHHHHHHTCCEEEEEEEECCTTS
T ss_pred HHHHHHHHHcCCeEEEEEECCCCCCC
Confidence 77778888888877754 3334444
No 9
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.61 E-value=9.3e-15 Score=154.64 Aligned_cols=146 Identities=22% Similarity=0.365 Sum_probs=114.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---CCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT---HPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~---~~~~fDvI 198 (581)
+.+|||++||+|.+++.++.. |+.+|+++|+|+.+++.+++|++.|++. ++++++++|+..++.. ....||+|
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVE--DRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCC--ccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 458999999999999999984 7889999999999999999999999985 4799999999988753 24689999
Q ss_pred eeCCCCCC-------------hHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHH
Q 047386 199 DLDPYGSP-------------SVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLA 265 (581)
Q Consensus 199 dLDPyGs~-------------~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~ 265 (581)
++||+... ..++..++++|++||+|++++ |... +....+..
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~------~~~~--------------------~~~~~~~~ 347 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCS------CSQH--------------------VDLQMFKD 347 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEE------CCTT--------------------SCHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE------CCCC--------------------CCHHHHHH
Confidence 99995321 256778899999999888876 5322 33455667
Q ss_pred HHHHHHHHcCCceEEEe-------------ecccCceEE-EEEEEE
Q 047386 266 CIESHANRYKRYIEPVL-------------SVQMDFYVR-VFVRIY 297 (581)
Q Consensus 266 ~i~~~Aa~~~r~i~Pll-------------s~s~dhY~R-vfVrV~ 297 (581)
.+.+++.+.++.++.+- .++...|++ +++||.
T Consensus 348 ~v~~~~~~~~~~~~~i~~~~~~~~d~p~~~~~pe~~yLk~~~~~~~ 393 (396)
T 2as0_A 348 MIIAAGAKAGKFLKMLEPYRTQAPDHPILMASKDTEYLKCLFLYVE 393 (396)
T ss_dssp HHHHHHHHTTEEEEESSCBBCSCTTSCCBTTCGGGCCCEEEEEEEE
T ss_pred HHHHHHHHcCCeEEEEeccCCCCCCCCcCCCCCCCCCcEEEEEEEE
Confidence 77778888877665432 344556887 677775
No 10
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.57 E-value=3e-14 Score=162.09 Aligned_cols=103 Identities=18% Similarity=0.296 Sum_probs=90.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+|||||.+|+.+++ .|+.+|+++|+|+.+++.+++|+++|++.. ++++++++|++.++.....+||+|++|
T Consensus 540 g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~s~~al~~a~~N~~~ngl~~-~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGL--GGARSTTTVDMSRTYLEWAERNLRLNGLTG-RAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTTCCS-TTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCcEEEeeechhHHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHcCCCc-cceEEEecCHHHHHHhcCCCccEEEEC
Confidence 45899999999999999998 589999999999999999999999999852 479999999999987766789999999
Q ss_pred CCCCC---------------hHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSP---------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~---------------~~fld~A~~~l~~gGlL~vTa 227 (581)
|+... ..++..+.++|++||+|++++
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~ 657 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSN 657 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 95321 135778899999999999876
No 11
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.55 E-value=1.8e-14 Score=149.80 Aligned_cols=96 Identities=21% Similarity=0.293 Sum_probs=87.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+|||||.+++. |+ ++.+|+++|+|+.|++.+++|++.|++. ++++++++|+..++ ..||+|++|
T Consensus 196 ~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~--~~v~~~~~D~~~~~----~~fD~Vi~d 265 (336)
T 2yx1_A 196 NDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLE--HKIIPILSDVREVD----VKGNRVIMN 265 (336)
T ss_dssp TCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCGGGCC----CCEEEEEEC
T ss_pred CCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECChHHhc----CCCcEEEEC
Confidence 45899999999999999 87 5789999999999999999999999985 57999999999887 579999999
Q ss_pred CCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+.....+++.++++|++||+|++.+
T Consensus 266 pP~~~~~~l~~~~~~L~~gG~l~~~~ 291 (336)
T 2yx1_A 266 LPKFAHKFIDKALDIVEEGGVIHYYT 291 (336)
T ss_dssp CTTTGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CcHhHHHHHHHHHHHcCCCCEEEEEE
Confidence 87666799999999999999988865
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.54 E-value=6.2e-14 Score=147.90 Aligned_cols=129 Identities=26% Similarity=0.345 Sum_probs=105.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---CCcccE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH---PKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~---~~~fDv 197 (581)
.+.+|||++||+|.+++.++.. +.+|+++|+|+.+++.+++|++.|++. +++++++|+..++... ...||+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~---~~~~~~~d~~~~~~~~~~~~~~fD~ 282 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLG---NVRVLEANAFDLLRRLEKEGERFDL 282 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCT---TEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC---CceEEECCHHHHHHHHHhcCCCeeE
Confidence 4668999999999999999984 678999999999999999999999985 4899999999987542 468999
Q ss_pred EeeCCCCCC-------------hHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHH
Q 047386 198 VDLDPYGSP-------------SVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILL 264 (581)
Q Consensus 198 IdLDPyGs~-------------~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill 264 (581)
|++||+... ..++..++++|++||+|++++ |... +....+.
T Consensus 283 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~------~~~~--------------------~~~~~~~ 336 (382)
T 1wxx_A 283 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATAS------CSHH--------------------MTEPLFY 336 (382)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEE------CCTT--------------------SCHHHHH
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE------CCCC--------------------CCHHHHH
Confidence 999995321 257788999999999999986 5322 3345667
Q ss_pred HHHHHHHHHcCCceEEE
Q 047386 265 ACIESHANRYKRYIEPV 281 (581)
Q Consensus 265 ~~i~~~Aa~~~r~i~Pl 281 (581)
..+.+++.+.++.++.+
T Consensus 337 ~~i~~~~~~~g~~~~~i 353 (382)
T 1wxx_A 337 AMVAEAAQDAHRLLRVV 353 (382)
T ss_dssp HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHcCCeEEEE
Confidence 77888888998877754
No 13
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.47 E-value=4.2e-13 Score=126.39 Aligned_cols=124 Identities=19% Similarity=0.195 Sum_probs=96.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvId 199 (581)
.+.+|||+.||||.+++.+++ .|+.+|+++|+|+.+++.+++|++.+++ ++++++++|+..++... ...||+|+
T Consensus 44 ~~~~vLDlgcG~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~fD~i~ 118 (189)
T 3p9n_A 44 TGLAVLDLYAGSGALGLEALS--RGAASVLFVESDQRSAAVIARNIEALGL---SGATLRRGAVAAVVAAGTTSPVDLVL 118 (189)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--TTCSEEEEEECCHHHHHHHHHHHHHHTC---SCEEEEESCHHHHHHHCCSSCCSEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHH--CCCCeEEEEECCHHHHHHHHHHHHHcCC---CceEEEEccHHHHHhhccCCCccEEE
Confidence 467999999999999999888 4788999999999999999999999998 37999999999988643 46899999
Q ss_pred eCC-CCCC----hHhHHHHHH--hccCCCeEEEEeccc---hhhcCCCcchhhhhccCcc
Q 047386 200 LDP-YGSP----SVFLDSAIQ--SVADGGMLMCTATDM---AVLCGGNGEVCYSKYGSYP 249 (581)
Q Consensus 200 LDP-yGs~----~~fld~A~~--~l~~gGlL~vTaTD~---a~Lcg~~~~~c~rkYG~~~ 249 (581)
+|| |... ..++....+ .|++||+|++..... ..+.+.....-.++||...
T Consensus 119 ~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~yg~~~ 178 (189)
T 3p9n_A 119 ADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTR 178 (189)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTSCCCCCCTTEEECCCEEETTEE
T ss_pred ECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCCCCccCCCceEEEEEcccCcEE
Confidence 998 6543 245566666 899999999986322 2233333334456777643
No 14
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.43 E-value=2.5e-13 Score=130.29 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=96.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCc-ccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKE-FDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~-fDvId 199 (581)
+.+|||++||||.+++.++.. |+.+|+++|+|+.+++.+++|++.|++. ..+++++++|+..++... ... ||+|+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCS-SEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCC-TTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCC-ccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 568999999999999998874 7789999999999999999999999973 136899999999887542 357 99999
Q ss_pred eCCC-CC--ChHhHHHH--HHhccCCCeEEEEeccch--hhcCCCcchhhhhccCccC
Q 047386 200 LDPY-GS--PSVFLDSA--IQSVADGGMLMCTATDMA--VLCGGNGEVCYSKYGSYPL 250 (581)
Q Consensus 200 LDPy-Gs--~~~fld~A--~~~l~~gGlL~vTaTD~a--~Lcg~~~~~c~rkYG~~~~ 250 (581)
+||+ .. ...++... .++|++||+|++++.... .++........++||...+
T Consensus 131 ~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~yG~~~~ 188 (201)
T 2ift_A 131 LDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDKPLITPENWTLLKEKTTGIVSY 188 (201)
T ss_dssp ECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSSCCCCCTTEEEEEEEEETTEEE
T ss_pred ECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCCCccccchhHHHHHHhcCCEEE
Confidence 9984 43 22345544 345999999998764333 2344455567788998754
No 15
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.42 E-value=1.5e-12 Score=131.32 Aligned_cols=101 Identities=21% Similarity=0.194 Sum_probs=89.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||++||+|.+++.+|+.. +..+|+++|+|+.|++.+++|++.|++. +++++++|+..+ .. ...||+|++
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~-~~~~V~~vD~s~~av~~a~~n~~~n~l~---~~~~~~~d~~~~-~~-~~~~D~Vi~ 192 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS-KPKLVYAIEKNPTAYHYLCENIKLNKLN---NVIPILADNRDV-EL-KDVADRVIM 192 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT-CCSEEEEEECCHHHHHHHHHHHHHTTCS---SEEEEESCGGGC-CC-TTCEEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCC---CEEEEECChHHc-Cc-cCCceEEEE
Confidence 35699999999999999999963 3568999999999999999999999985 588999999887 43 468999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+.....++..+++.|++||+|+++|
T Consensus 193 d~p~~~~~~l~~~~~~LkpgG~l~~s~ 219 (272)
T 3a27_A 193 GYVHKTHKFLDKTFEFLKDRGVIHYHE 219 (272)
T ss_dssp CCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCcccHHHHHHHHHHHcCCCCEEEEEE
Confidence 997666789999999999999999986
No 16
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.36 E-value=3.1e-12 Score=122.71 Aligned_cols=101 Identities=13% Similarity=0.161 Sum_probs=83.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||++||||.+++.++.. |+.+|+++|+|+.+++.+++|++.+++ .+++++++|+..++......||+|++|
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~---~~v~~~~~D~~~~~~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKA---GNARVVNSNAMSFLAQKGTPHNIVFVD 129 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTC---CSEEEECSCHHHHHSSCCCCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCC---CcEEEEECCHHHHHhhcCCCCCEEEEC
Confidence 568999999999999998874 778999999999999999999999997 368999999999875444689999999
Q ss_pred CC-CC--ChHhHHHHHH--hccCCCeEEEEe
Q 047386 202 PY-GS--PSVFLDSAIQ--SVADGGMLMCTA 227 (581)
Q Consensus 202 Py-Gs--~~~fld~A~~--~l~~gGlL~vTa 227 (581)
|+ .. ...++....+ .|++||+|++++
T Consensus 130 ~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~ 160 (202)
T 2fpo_A 130 PPFRRGLLEETINLLEDNGWLADEALIYVES 160 (202)
T ss_dssp CSSSTTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCCCcHHHHHHHHHhcCccCCCcEEEEEE
Confidence 84 43 2234554443 399999999986
No 17
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.31 E-value=3e-11 Score=119.90 Aligned_cols=101 Identities=15% Similarity=0.227 Sum_probs=85.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdL 200 (581)
+.+|||+.||+|..++.++.. +...|+++|+|+.+++.+++|+..|++. ++++++++|+..+.... ...||+|+.
T Consensus 50 ~~~vLDlG~G~G~~~~~la~~--~~~~v~gvDi~~~~~~~a~~n~~~~~~~--~~v~~~~~D~~~~~~~~~~~~fD~Ii~ 125 (259)
T 3lpm_A 50 KGKIIDLCSGNGIIPLLLSTR--TKAKIVGVEIQERLADMAKRSVAYNQLE--DQIEIIEYDLKKITDLIPKERADIVTC 125 (259)
T ss_dssp CCEEEETTCTTTHHHHHHHTT--CCCEEEEECCSHHHHHHHHHHHHHTTCT--TTEEEECSCGGGGGGTSCTTCEEEEEE
T ss_pred CCEEEEcCCchhHHHHHHHHh--cCCcEEEEECCHHHHHHHHHHHHHCCCc--ccEEEEECcHHHhhhhhccCCccEEEE
Confidence 568999999999999999985 4459999999999999999999999996 67999999999887532 468999999
Q ss_pred CC-CCCC-----------------------hHhHHHHHHhccCCCeEEEE
Q 047386 201 DP-YGSP-----------------------SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 201 DP-yGs~-----------------------~~fld~A~~~l~~gGlL~vT 226 (581)
|| |... ..++..+.++|++||.|++.
T Consensus 126 npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 175 (259)
T 3lpm_A 126 NPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV 175 (259)
T ss_dssp CCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEE
Confidence 98 4221 24888899999999999995
No 18
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.31 E-value=4.2e-12 Score=117.66 Aligned_cols=103 Identities=19% Similarity=0.317 Sum_probs=85.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.+++. |..+|+++|+|+.+++.+++|++.+++. ++++++++|+..++......||+|++
T Consensus 31 ~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 31 NGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAE--NRFTLLKMEAERAIDCLTGRFDLVFL 106 (177)
T ss_dssp CSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCG--GGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECcHHHhHHhhcCCCCEEEE
Confidence 3568999999999999999985 6789999999999999999999999985 57999999999977654567999999
Q ss_pred CC-CC--CChHhHHHHH--HhccCCCeEEEEe
Q 047386 201 DP-YG--SPSVFLDSAI--QSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yG--s~~~fld~A~--~~l~~gGlL~vTa 227 (581)
|| |. ....++.... +.|++||+|++++
T Consensus 107 ~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 107 DPPYAKETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp CCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred CCCCCcchHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 97 42 1234455444 7889999999976
No 19
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.27 E-value=1.8e-11 Score=123.16 Aligned_cols=104 Identities=24% Similarity=0.271 Sum_probs=88.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---CCCcccE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT---HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~---~~~~fDv 197 (581)
.+.+|||++||+|..++.++...++...|+++|+|+.+++.+++|++.+++. +++++++|+..+... ....||+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~---~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL---NTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC---SEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC---cEEEEeCChHhcchhhhhccccCCE
Confidence 4679999999999999999987667789999999999999999999999984 689999999887642 2457999
Q ss_pred EeeCCCCCC----------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSP----------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~----------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
|++||+-+. ..+++.+.+.|++||.|+++.
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~st 211 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYST 211 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 999974221 467888999999999988865
No 20
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.27 E-value=1.5e-11 Score=129.33 Aligned_cols=98 Identities=21% Similarity=0.173 Sum_probs=78.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCC---------
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHP--------- 192 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~--------- 192 (581)
+.+|||++||+|.+++.+|. ++.+|+++|+|+.|++.+++|++.|++. +++++++|+..++....
T Consensus 214 ~~~vLDl~cG~G~~~l~la~---~~~~V~gvd~~~~ai~~a~~n~~~ng~~---~v~~~~~d~~~~~~~~~~~~~~~~l~ 287 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR---NFDRVLATEIAKPSVAAAQYNIAANHID---NVQIIRMAAEEFTQAMNGVREFNRLQ 287 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG---GSSEEEEECCCHHHHHHHHHHHHHTTCC---SEEEECCCSHHHHHHHSSCCCCTTGG
T ss_pred CCEEEEccCCCCHHHHHHHh---cCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEECCHHHHHHHHhhcccccccc
Confidence 56899999999999998887 4679999999999999999999999984 68999999998875321
Q ss_pred ------CcccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 193 ------KEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 193 ------~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
..||+|++||+.. .....+++.|+++|.|.+.+
T Consensus 288 ~~~~~~~~fD~Vv~dPPr~--g~~~~~~~~l~~~g~ivyvs 326 (369)
T 3bt7_A 288 GIDLKSYQCETIFVDPPRS--GLDSETEKMVQAYPRILYIS 326 (369)
T ss_dssp GSCGGGCCEEEEEECCCTT--CCCHHHHHHHTTSSEEEEEE
T ss_pred ccccccCCCCEEEECcCcc--ccHHHHHHHHhCCCEEEEEE
Confidence 2799999999633 23344566676776665544
No 21
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.26 E-value=2.2e-11 Score=112.96 Aligned_cols=103 Identities=22% Similarity=0.347 Sum_probs=84.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---CCCcccE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT---HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~---~~~~fDv 197 (581)
.+.+|||+.||+|.+++.+++ .+..+|+++|+|+.+++.+++|+..+++. .+++++++|+..++.. ....||+
T Consensus 44 ~~~~vLD~GcG~G~~~~~~~~--~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 44 DGGMALDLYSGSGGLAIEAVS--RGMDKSICIEKNFAALKVIKENIAITKEP--EKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp SSCEEEETTCTTCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCEEEeCCccCHHHHHHHH--cCCCEEEEEECCHHHHHHHHHHHHHhCCC--cceEEEECcHHHHHHHHHhcCCCCCE
Confidence 456999999999999999888 46789999999999999999999999985 5799999999987642 1468999
Q ss_pred EeeCC-CC--CChHhHHHH--HHhccCCCeEEEEe
Q 047386 198 VDLDP-YG--SPSVFLDSA--IQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDP-yG--s~~~fld~A--~~~l~~gGlL~vTa 227 (581)
|++|| |. ....++... .+.|++||+|+++.
T Consensus 120 i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~ 154 (187)
T 2fhp_A 120 VLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCET 154 (187)
T ss_dssp EEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEe
Confidence 99998 43 233455544 56789999999875
No 22
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.24 E-value=6.5e-11 Score=114.12 Aligned_cols=145 Identities=21% Similarity=0.209 Sum_probs=106.8
Q ss_pred CCCeEEEecCc-ccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEALSA-SGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsg-SG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+|||+.|| +|..++.+++.. ..+|+++|+|+.+++.+++|++.|++ +++++++|+..+.......||+|+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~----~v~~~~~d~~~~~~~~~~~fD~I~ 128 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS----NVRLVKSNGGIIKGVVEGTFDVIF 128 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC----CCEEEECSSCSSTTTCCSCEEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC----CcEEEeCCchhhhhcccCceeEEE
Confidence 35699999999 999999999863 46899999999999999999999987 478999997533322246899999
Q ss_pred eCC-CCC----------------------ChHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccch
Q 047386 200 LDP-YGS----------------------PSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCH 256 (581)
Q Consensus 200 LDP-yGs----------------------~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~h 256 (581)
.|| |.. ...++..+.+.|++||.|++.. ...
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~-------~~~------------------- 182 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYL-------PDK------------------- 182 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEE-------ESC-------------------
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEe-------ccc-------------------
Confidence 998 422 1457888889999999999863 110
Q ss_pred hhhHHHHHHHHHHHHHHcCCceEEEeecccCceEEEEEEEEcChhh
Q 047386 257 EMALRILLACIESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASA 302 (581)
Q Consensus 257 E~~lRill~~i~~~Aa~~~r~i~Plls~s~dhY~RvfVrV~~~~~~ 302 (581)
. ..+..+.....++|..++-+ .+..++.++.+++..+.+..
T Consensus 183 ~----~~~~~~~~~l~~~g~~~~~~-~~~~g~~~~~~l~f~~~~~~ 223 (230)
T 3evz_A 183 E----KLLNVIKERGIKLGYSVKDI-KFKVGTRWRHSLIFFKGISE 223 (230)
T ss_dssp H----HHHHHHHHHHHHTTCEEEEE-EECCCC-CEEEEEEECCC--
T ss_pred H----hHHHHHHHHHHHcCCceEEE-EecCCCeEEEEEEEeccccc
Confidence 0 12344556667778766554 66777888888888776543
No 23
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.24 E-value=2.7e-11 Score=131.51 Aligned_cols=104 Identities=20% Similarity=0.201 Sum_probs=88.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||++||+|..++.+|...++...|+++|+|+.+++.+++|++.+|+. ++.+.++|+..+.......||+|++
T Consensus 105 ~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~---nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 105 PGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVS---NAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCS---SEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---ceEEEeCCHHHhhhhccccCCEEEE
Confidence 4679999999999999999987666679999999999999999999999985 6899999999886433568999999
Q ss_pred CCCCCCh--------------------------HhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPS--------------------------VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~--------------------------~fld~A~~~l~~gGlL~vTa 227 (581)
||+-|.. .+|+.|.++|++||.|.++.
T Consensus 182 DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsT 234 (456)
T 3m4x_A 182 DAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYST 234 (456)
T ss_dssp ECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 9963211 56888999999999887754
No 24
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.20 E-value=4.8e-11 Score=129.84 Aligned_cols=103 Identities=24% Similarity=0.278 Sum_probs=87.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||++||+|..++.+|...++...|+++|+|+.+++.+++|++.+|+ . ++++++|+..+.......||+|++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~---~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGA---P-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCC---C-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCC---e-EEEEECCHHHhhhhccccCCEEEE
Confidence 567999999999999999998766667899999999999999999999998 3 789999999876433568999999
Q ss_pred CCCCCC--------------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSP--------------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~--------------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
||+-|. ..+|+.|.+.|++||.|.++.
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysT 229 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYST 229 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 986331 346788899999999987754
No 25
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.18 E-value=1e-10 Score=114.42 Aligned_cols=103 Identities=16% Similarity=0.155 Sum_probs=89.2
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEeeC
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDLD 201 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLD 201 (581)
.+|||+.||+|..++.+|..++...+|+++|+|+..++.+++|++.+++.. ++++++++|+..++... ...||+|++|
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~-~~i~~~~gda~~~l~~~~~~~fD~V~~d 136 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSP-SRVRFLLSRPLDVMSRLANDSYQLVFGQ 136 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCG-GGEEEECSCHHHHGGGSCTTCEEEEEEC
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-CcEEEEEcCHHHHHHHhcCCCcCeEEEc
Confidence 389999999999999999876534689999999999999999999999841 48999999999998764 5689999999
Q ss_pred CC-CCChHhHHHHHHhccCCCeEEEE
Q 047386 202 PY-GSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 202 Py-Gs~~~fld~A~~~l~~gGlL~vT 226 (581)
+. .....|++.+.+.|++||+|++.
T Consensus 137 ~~~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 137 VSPMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp CCTTTHHHHHHHHHHHEEEEEEEEET
T ss_pred CcHHHHHHHHHHHHHHcCCCcEEEEe
Confidence 84 33446899999999999999984
No 26
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.18 E-value=1.6e-10 Score=114.33 Aligned_cols=105 Identities=21% Similarity=0.324 Sum_probs=91.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCC--CcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHP--KEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~--~~fDvI 198 (581)
.+.+|||+.||+|..++.++..+++..+|+++|+|+..++.+++|++.+++. ++++++++|+..++.... ..||+|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVD--QRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 4679999999999999999997664678999999999999999999999986 689999999999876543 389999
Q ss_pred eeCCCC-CChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYG-SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyG-s~~~fld~A~~~l~~gGlL~vTa 227 (581)
++|... ....+++.+.++|++||+|++..
T Consensus 141 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 141 FIDADKPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EECSCGGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred EECCchHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 999842 23478999999999999999864
No 27
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.18 E-value=7.6e-11 Score=111.00 Aligned_cols=104 Identities=14% Similarity=0.112 Sum_probs=87.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.+++...+..+|+++|+|+.+++.+++|++.+++. .+++++++|+..+.......||+|++|
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLI--DRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCG--GGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCeEEEECCHHHHhhhccCCceEEEEc
Confidence 568999999999999999987533458999999999999999999999985 579999999987764345689999999
Q ss_pred CCCCC-------------hHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSP-------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~-------------~~fld~A~~~l~~gGlL~vTa 227 (581)
|.-.+ ..++..+.+.|++||.|++..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~ 139 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI 139 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE
Confidence 72211 358888999999999999874
No 28
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.17 E-value=7.4e-11 Score=107.55 Aligned_cols=100 Identities=21% Similarity=0.343 Sum_probs=83.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---CCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH---PKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~---~~~fDvI 198 (581)
+.+|||+.||+|..++.++.. |.. |+++|+|+.+++.+++|+..+++ +++++++|+..++... ...||+|
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~--~~~-v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE--GWE-AVLVEKDPEAVRLLKENVRRTGL----GARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT--TCE-EEEECCCHHHHHHHHHHHHHHTC----CCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEeCCCcCHHHHHHHHC--CCe-EEEEeCCHHHHHHHHHHHHHcCC----ceEEEeccHHHHHHhhhccCCceEEE
Confidence 568999999999999999985 655 99999999999999999999986 4789999998865431 2479999
Q ss_pred eeCC-C-CCChHhHHHHH--HhccCCCeEEEEec
Q 047386 199 DLDP-Y-GSPSVFLDSAI--QSVADGGMLMCTAT 228 (581)
Q Consensus 199 dLDP-y-Gs~~~fld~A~--~~l~~gGlL~vTaT 228 (581)
++|| | +....++.... +.|++||+|++++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~ 148 (171)
T 1ws6_A 115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQHP 148 (171)
T ss_dssp EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEE
T ss_pred EECCCCchhHHHHHHHHHhhcccCCCcEEEEEeC
Confidence 9998 6 34446666666 88999999999863
No 29
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.17 E-value=3.1e-10 Score=109.64 Aligned_cols=104 Identities=19% Similarity=0.283 Sum_probs=85.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCC-----Ccc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHP-----KEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~-----~~f 195 (581)
.+.+|||+.||+|..++.+|..++...+|+++|+|+.+++.+++|++.+++. ++++++++|+..++.... ..|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQ--DKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCC--CceEEEECCHHHHHHHHHHhcCCCce
Confidence 3569999999999999999986543468999999999999999999999986 579999999999876543 589
Q ss_pred cEEeeCCCCCCh----HhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDPYGSPS----VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDPyGs~~----~fld~A~~~l~~gGlL~vTa 227 (581)
|+|++|...... .++... +.|++||+|++..
T Consensus 136 D~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESC
T ss_pred EEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeC
Confidence 999999843211 234444 8899999998853
No 30
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.16 E-value=1.1e-10 Score=112.11 Aligned_cols=105 Identities=14% Similarity=0.292 Sum_probs=90.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCC-----Ccc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHP-----KEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~-----~~f 195 (581)
.+.+|||+.||+|..++.++..+++..+|+++|+|+.+++.+++|++.+++. ++++++++|+..++.... ..|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLS--DKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCC--CceEEEeCCHHHHHHHhhhccCCCCc
Confidence 4569999999999999999987664678999999999999999999999986 579999999988765422 689
Q ss_pred cEEeeCCCCC-ChHhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDPYGS-PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDPyGs-~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+|++|+... ...++..+.+.|++||+|++..
T Consensus 142 D~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 142 DLIYIDADKANTDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp EEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 9999998532 4578889999999999999864
No 31
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.14 E-value=1.6e-10 Score=118.91 Aligned_cols=103 Identities=22% Similarity=0.253 Sum_probs=87.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++...++...|+++|+|+.+++.+++|++.+++. +++++++|+..+.. ....||+|++
T Consensus 118 ~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~---~v~~~~~D~~~~~~-~~~~fD~Il~ 193 (315)
T 1ixk_A 118 PGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVL---NVILFHSSSLHIGE-LNVEFDKILL 193 (315)
T ss_dssp TTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCC---SEEEESSCGGGGGG-GCCCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCC---eEEEEECChhhccc-ccccCCEEEE
Confidence 4679999999999999999986555578999999999999999999999984 58999999987654 2457999999
Q ss_pred CCC--CCC------------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPY--GSP------------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPy--Gs~------------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
||+ |+. ..+++.+.+.|++||.|+++.
T Consensus 194 d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~st 246 (315)
T 1ixk_A 194 DAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYST 246 (315)
T ss_dssp ECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEe
Confidence 985 221 367888999999999998854
No 32
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.14 E-value=2.1e-10 Score=115.97 Aligned_cols=104 Identities=13% Similarity=0.230 Sum_probs=88.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH--hCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF--NGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~--N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+.+|+|..++.+++. .++.+|+++|+|+.+++.+++|+.. +++. ..+++++.+|+..++......||+|+
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~-~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKH-PSVKKATLVDIDGKVIEYSKKFLPSIAGKLD-DPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTC-TTCSEEEEEESCHHHHHHHHHHCHHHHTTTT-STTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHhC-CCCceEEEEECCHHHHHHHHHHhHhhccccC-CCceEEEECcHHHHHhhCCCCeeEEE
Confidence 568999999999999999985 4788999999999999999999865 2443 25899999999999876567899999
Q ss_pred eCCCCC--------ChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGS--------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs--------~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++.. ...|+..+.+.|++||+|++.+
T Consensus 154 ~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 154 VDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp ESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 998531 1579999999999999999874
No 33
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.14 E-value=1.1e-09 Score=103.70 Aligned_cols=94 Identities=19% Similarity=0.283 Sum_probs=77.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.++.. |..+|+++|+|+.+++.+++|++.+++ +++++++|+..+ ...||+|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~d~~~~----~~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG----KFKVFIGDVSEF----NSRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT----SEEEEESCGGGC----CCCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC----CEEEEECchHHc----CCCCCEEEE
Confidence 4679999999999999999984 777999999999999999999999986 488999998774 247999999
Q ss_pred CC-CCC-----ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YGS-----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yGs-----~~~fld~A~~~l~~gGlL~vTa 227 (581)
|| |+. ...+++.+.+.+ |.+++.+
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l---~~~~~~~ 148 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS---DVVYSIH 148 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC---SEEEEEE
T ss_pred cCCCccccCCchHHHHHHHHHhc---CcEEEEE
Confidence 98 433 246888888877 4555554
No 34
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.13 E-value=1.7e-10 Score=125.84 Aligned_cols=104 Identities=26% Similarity=0.388 Sum_probs=87.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||++||+|..++.+|..+++...|+++|+|+.+++.+++|++.+|+. +++++++|+..+.......||+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~---nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGIS---NVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCC---SEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC---cEEEEeCCHHHhhhhccccCCEEEE
Confidence 4679999999999999999987655578999999999999999999999984 6899999998765433467999999
Q ss_pred CCCCCC--------------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSP--------------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~--------------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
||+-|. ..+|+.|.++|++||.|+++.
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysT 246 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYST 246 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 985321 145778899999999988754
No 35
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.12 E-value=3.4e-10 Score=108.81 Aligned_cols=105 Identities=19% Similarity=0.252 Sum_probs=88.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC----CCccc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH----PKEFD 196 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~----~~~fD 196 (581)
.+.+|||+.||+|..++.++..++...+|+++|+|+.+++.+++|+..+++. ++++++++|+...+... ...||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLN--DRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 4679999999999999999997653458999999999999999999999986 57999999998876532 15799
Q ss_pred EEeeCCCCC-ChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGS-PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs-~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++|+... ...++..+.+.|++||+|++..
T Consensus 136 ~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 136 FIFIDADKQNNPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp EEEECSCGGGHHHHHHHHHHTCCTTCEEEEES
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 999998532 3478888999999999998864
No 36
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.11 E-value=5.1e-10 Score=107.72 Aligned_cols=99 Identities=14% Similarity=0.193 Sum_probs=85.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.+++. ..+|+++|+|+.+++.+++|++.+++. ++++++++|+...+... ..||+|+++
T Consensus 56 ~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~~~~~-~~~D~v~~~ 129 (204)
T 3njr_A 56 GELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLS--PRMRAVQGTAPAALADL-PLPEAVFIG 129 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCTTGGGTTS-CCCSEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCC--CCEEEEeCchhhhcccC-CCCCEEEEC
Confidence 568999999999999999985 458999999999999999999999985 57999999998866432 479999999
Q ss_pred CCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+ +...+++..+.+.|++||.|++.+
T Consensus 130 ~-~~~~~~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 130 G-GGSQALYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp S-CCCHHHHHHHHHHSCTTCEEEEEE
T ss_pred C-cccHHHHHHHHHhcCCCcEEEEEe
Confidence 8 333338899999999999999976
No 37
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.10 E-value=3.1e-10 Score=109.30 Aligned_cols=105 Identities=22% Similarity=0.244 Sum_probs=89.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---C--Ccc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH---P--KEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~---~--~~f 195 (581)
.+.+|||+.||+|..++.++..+++..+|+++|+|+.+++.+++|++.+++. ++++++++|+...+... . ..|
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAE--HKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCT--TTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--CeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 4669999999999999999987654578999999999999999999999985 58999999998876432 1 579
Q ss_pred cEEeeCCC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDPY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDPy-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+|++|+. .....++..+.++|++||+|++..
T Consensus 147 D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~ 179 (229)
T 2avd_A 147 DVAVVDADKENCSAYYERCLQLLRPGGILAVLR 179 (229)
T ss_dssp EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEC
Confidence 99999985 334578999999999999998853
No 38
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.10 E-value=5.2e-10 Score=111.11 Aligned_cols=105 Identities=19% Similarity=0.170 Sum_probs=90.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC------CCc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH------PKE 194 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~------~~~ 194 (581)
.+.+|||+.||+|..++.++..++...+|+++|+|+..++.+++|++.+++. ++++++++|+..++... ...
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVD--HKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCeEEEECCHHHHHHHHHhccCCCCC
Confidence 4669999999999999999987663468999999999999999999999985 68999999999876532 468
Q ss_pred ccEEeeCCC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLDPY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPy-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+|++|.. .....+++.+.++|++||+|++..
T Consensus 157 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 157 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred EEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 999999974 334578899999999999998864
No 39
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.10 E-value=2.3e-10 Score=123.12 Aligned_cols=96 Identities=22% Similarity=0.343 Sum_probs=81.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||++||+|.+++.+|.. +.+|+++|+|+.|++.+++|++.|++ . ++++++|+..++.. .||+|++
T Consensus 290 ~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl---~-v~~~~~d~~~~~~~---~fD~Vv~ 359 (425)
T 2jjq_A 290 EGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNV---D-AEFEVASDREVSVK---GFDTVIV 359 (425)
T ss_dssp CSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTC---C-EEEEECCTTTCCCT---TCSEEEE
T ss_pred CCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCC---c-EEEEECChHHcCcc---CCCEEEE
Confidence 4569999999999999999983 46899999999999999999999997 3 89999999887642 7999999
Q ss_pred CCC--CCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPY--GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPy--Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+ |....+++. +..+++||+|+++|
T Consensus 360 dPPr~g~~~~~~~~-l~~l~p~givyvsc 387 (425)
T 2jjq_A 360 DPPRAGLHPRLVKR-LNREKPGVIVYVSC 387 (425)
T ss_dssp CCCTTCSCHHHHHH-HHHHCCSEEEEEES
T ss_pred cCCccchHHHHHHH-HHhcCCCcEEEEEC
Confidence 996 444446654 55689999999986
No 40
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.09 E-value=1.3e-10 Score=116.93 Aligned_cols=77 Identities=22% Similarity=0.319 Sum_probs=66.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCH-------HHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCC--
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDK-------ASVEACRRNIKFNGSVACSKVESHLADARVYMLTHP-- 192 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~-------~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~-- 192 (581)
+.+|||++||+|..++.+|+. |. +|+++|+|+ .+++.+++|++.|++. ++++++++|+..++....
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~~--g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~--~ri~~~~~d~~~~l~~~~~~ 158 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLASL--GL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTA--ARINLHFGNAAEQMPALVKT 158 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHHT--TC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHH--TTEEEEESCHHHHHHHHHHH
T ss_pred cCeEEEeeCccCHHHHHHHHh--CC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCc--cCeEEEECCHHHHHHhhhcc
Confidence 347999999999999999984 54 799999999 9999999999999985 469999999999875322
Q ss_pred -CcccEEeeCCC
Q 047386 193 -KEFDVVDLDPY 203 (581)
Q Consensus 193 -~~fDvIdLDPy 203 (581)
..||+|++||+
T Consensus 159 ~~~fD~V~~dP~ 170 (258)
T 2r6z_A 159 QGKPDIVYLDPM 170 (258)
T ss_dssp HCCCSEEEECCC
T ss_pred CCCccEEEECCC
Confidence 57999999994
No 41
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.07 E-value=4.7e-10 Score=110.37 Aligned_cols=105 Identities=18% Similarity=0.185 Sum_probs=89.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC------CCc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH------PKE 194 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~------~~~ 194 (581)
.+.+|||+.||+|..++.+++.++...+|+++|+|+..++.+++|++.+++. ++++++++|+..++... ...
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVE--HKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 4669999999999999999997764578999999999999999999999985 68999999999877542 367
Q ss_pred ccEEeeCCCC-CChHhHHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLDPYG-SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPyG-s~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+|++|... ....|++.+.++|++||+|++..
T Consensus 148 fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 148 YDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 9999999742 23578899999999999998853
No 42
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.07 E-value=4.6e-10 Score=104.57 Aligned_cols=100 Identities=14% Similarity=0.083 Sum_probs=80.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.+++. ..+|+++|+|+.+++.+++|++.+++. +++++++|+..+.......||+|+++
T Consensus 23 ~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~---~v~~~~~~~~~l~~~~~~~fD~v~~~ 96 (185)
T 3mti_A 23 ESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIE---NTELILDGHENLDHYVREPIRAAIFN 96 (185)
T ss_dssp TCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCC---CEEEEESCGGGGGGTCCSCEEEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCC---cEEEEeCcHHHHHhhccCCcCEEEEe
Confidence 568999999999999999984 468999999999999999999999983 68999987766532235679999999
Q ss_pred C-CCCC------------hHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-YGSP------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-yGs~------------~~fld~A~~~l~~gGlL~vTa 227 (581)
+ |-.. ..++..+.+.|++||.|++..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 135 (185)
T 3mti_A 97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMI 135 (185)
T ss_dssp EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEE
Confidence 3 4211 145677789999999999875
No 43
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.07 E-value=8.5e-11 Score=116.46 Aligned_cols=105 Identities=18% Similarity=0.217 Sum_probs=90.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-----CCcc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-----PKEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-----~~~f 195 (581)
.+.+|||+.||+|..++.+|..++...+|+++|+|+.+++.+++|++.+++. ++++++++|+..++... ...|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQE--HKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCT--TTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 4569999999999999999986653468999999999999999999999986 68999999999887643 3689
Q ss_pred cEEeeCCCC-CChHhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDPYG-SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDPyG-s~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+|++|... ....+++.+.+.|++||+|++.-
T Consensus 138 D~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 138 DFIFIDADKTNYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp EEEEEESCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred eEEEEcCChHHhHHHHHHHHHhcCCCeEEEEEC
Confidence 999999852 23468889999999999999854
No 44
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.07 E-value=8.3e-10 Score=104.79 Aligned_cols=101 Identities=16% Similarity=0.072 Sum_probs=87.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++... +..+|+++|+|+.+++.+++|++.+++. +++++++|+...+... ..||+|+++
T Consensus 41 ~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~~~-~~~D~i~~~ 115 (204)
T 3e05_A 41 DLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVAR---NVTLVEAFAPEGLDDL-PDPDRVFIG 115 (204)
T ss_dssp TCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCT---TEEEEECCTTTTCTTS-CCCSEEEES
T ss_pred CCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCC---cEEEEeCChhhhhhcC-CCCCEEEEC
Confidence 5689999999999999999873 2578999999999999999999999983 7899999997665432 579999999
Q ss_pred C-CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+ +.....++..+.+.|++||.|++..
T Consensus 116 ~~~~~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 116 GSGGMLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp CCTTCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence 7 4556689999999999999999975
No 45
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.06 E-value=5.3e-10 Score=106.80 Aligned_cols=104 Identities=22% Similarity=0.297 Sum_probs=88.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++...+...+|+++|+|+.+++.+++|++.+++. ++++++++|+..++..... ||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLI--DRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGG--GGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--ceEEEEEecHHHHhccCCC-CCEEEE
Confidence 3569999999999999999986553468999999999999999999999985 5799999999988765445 999999
Q ss_pred CCC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPy-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|.. .....++..+.+.|++||+|++..
T Consensus 133 ~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 133 DCDVFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp ETTTSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred cCChhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 963 334578888899999999998853
No 46
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.06 E-value=4e-10 Score=110.10 Aligned_cols=104 Identities=13% Similarity=0.215 Sum_probs=89.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh-hCCCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML-THPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~-~~~~~fDvId 199 (581)
.+.+|||+.||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. ++++++++|+..++. .....||+|+
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~fD~V~ 147 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISD-DIHVTTIERNETMIQYAKQNLATYHFE--NQVRIIEGNALEQFENVNDKVYDMIF 147 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCT-TCEEEEEECCHHHHHHHHHHHHHTTCT--TTEEEEESCGGGCHHHHTTSCEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECCHHHHHHhhccCCccEEE
Confidence 466999999999999999998543 468999999999999999999999986 589999999988776 4456899999
Q ss_pred eCCC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPy-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|.. .....++..+.+.|++||+|++.-
T Consensus 148 ~~~~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 148 IDAAKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EETTSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EcCcHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 9984 334578899999999999998843
No 47
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.05 E-value=8.2e-10 Score=112.20 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=84.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcc---cEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEF---DVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~f---DvI 198 (581)
+.+|||+.||||.+++.++++ ++ .+|+++|+|+.+++.+++|++.|++. ++++++++|+...+. ..| |+|
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~-~~-~~v~~vDis~~al~~A~~n~~~~~l~--~~v~~~~~D~~~~~~---~~f~~~D~I 196 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF-SD-AIVFATDVSSKAVEIARKNAERHGVS--DRFFVRKGEFLEPFK---EKFASIEMI 196 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH-SS-CEEEEEESCHHHHHHHHHHHHHTTCT--TSEEEEESSTTGGGG---GGTTTCCEE
T ss_pred CCEEEEEeCchhHHHHHHHHC-CC-CEEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECcchhhcc---cccCCCCEE
Confidence 568999999999999999998 54 57999999999999999999999986 569999999988664 368 999
Q ss_pred eeCC-CCCC----------------------hHhHHHHH-HhccCCCeEEEEe
Q 047386 199 DLDP-YGSP----------------------SVFLDSAI-QSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDP-yGs~----------------------~~fld~A~-~~l~~gGlL~vTa 227 (581)
+.+| |... ..|+...+ +.+++||+|+++.
T Consensus 197 vsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 197 LSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp EECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred EEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 9998 4321 15777888 8999999999974
No 48
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.05 E-value=2.2e-10 Score=114.46 Aligned_cols=103 Identities=18% Similarity=0.304 Sum_probs=84.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH---hCCCCCCcEEEEehhHHHHHhh------CC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF---NGSVACSKVESHLADARVYMLT------HP 192 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~---N~~~~~~~v~v~~~DA~~~l~~------~~ 192 (581)
+.+|||+.||||..++.++...+ ...|+++|+|+.+++.+++|+.. |++. ++++++++|+..++.. ..
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~--~~v~~~~~D~~~~~~~~~~~~~~~ 113 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFS--ARIEVLEADVTLRAKARVEAGLPD 113 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTG--GGEEEEECCTTCCHHHHHHTTCCT
T ss_pred CCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCc--ceEEEEeCCHHHHhhhhhhhccCC
Confidence 45899999999999999998754 35899999999999999999999 8886 5799999999876431 13
Q ss_pred CcccEEeeCC-CCCC---------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 193 KEFDVVDLDP-YGSP---------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 193 ~~fDvIdLDP-yGs~---------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
..||+|+.+| |... ..++..+.++|++||.|++..
T Consensus 114 ~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 114 EHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp TCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 5799999997 5432 257888889999999998853
No 49
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.05 E-value=6.1e-10 Score=113.80 Aligned_cols=104 Identities=19% Similarity=0.316 Sum_probs=86.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH--hCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF--NGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~--N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+.||+|..++.+++. .++.+|+++|+|+.+++.+++|+.. +++. ..+++++++|+..++......||+|+
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKH-DSVEKAILCEVDGLVIEAARKYLKQTSCGFD-DPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTS-TTCSEEEEEESCHHHHHHHHHHCHHHHGGGG-CTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHhHhhccccC-CCceEEEECcHHHHHhhCCCCceEEE
Confidence 458999999999999999985 3578999999999999999999865 3442 15799999999998865556899999
Q ss_pred eCCCCC---------ChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGS---------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs---------~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++.. ...|+..+.+.|++||+|++.+
T Consensus 169 ~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 169 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp EEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 998531 2578899999999999999974
No 50
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.04 E-value=8.5e-10 Score=114.66 Aligned_cols=103 Identities=26% Similarity=0.216 Sum_probs=85.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||++||||.++++++........|+++|+|+.+++.+++|++.+|+. ++++.++|+..+... ...||+|+.
T Consensus 203 ~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~---~i~~~~~D~~~~~~~-~~~~D~Ii~ 278 (354)
T 3tma_A 203 PGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS---WIRFLRADARHLPRF-FPEVDRILA 278 (354)
T ss_dssp TTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT---TCEEEECCGGGGGGT-CCCCSEEEE
T ss_pred CCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC---ceEEEeCChhhCccc-cCCCCEEEE
Confidence 4568999999999999999986412357999999999999999999999984 689999999887643 346899999
Q ss_pred CC-CCCC-----------hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YGSP-----------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yGs~-----------~~fld~A~~~l~~gGlL~vTa 227 (581)
|| ||.. ..++..+.+.|++||.+++.+
T Consensus 279 npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t 317 (354)
T 3tma_A 279 NPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLT 317 (354)
T ss_dssp CCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred CCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 97 7641 246677788999999999875
No 51
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.04 E-value=4.5e-10 Score=118.65 Aligned_cols=105 Identities=17% Similarity=0.180 Sum_probs=84.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH-hC--CCCC--CcEEEEehhHHHHHhh---CC
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF-NG--SVAC--SKVESHLADARVYMLT---HP 192 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~-N~--~~~~--~~v~v~~~DA~~~l~~---~~ 192 (581)
.+.+|||+.+|+|..+.++++. ++.+|+++|+|+.+++++++|+.. |+ ++.. .+++++.+||+.+|.. ..
T Consensus 188 ~pkrVL~IGgG~G~~arellk~--~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4679999999999999999985 568999999999999999999863 32 3211 2699999999999975 35
Q ss_pred CcccEEeeCCCC-----CC-----hHhHHHH----HHhccCCCeEEEEe
Q 047386 193 KEFDVVDLDPYG-----SP-----SVFLDSA----IQSVADGGMLMCTA 227 (581)
Q Consensus 193 ~~fDvIdLDPyG-----s~-----~~fld~A----~~~l~~gGlL~vTa 227 (581)
++||+|++||+. .| ..|+... .++|++||+|++.+
T Consensus 266 ~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 266 REFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp CCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 789999999853 12 3566665 78999999999986
No 52
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.03 E-value=1.7e-09 Score=105.64 Aligned_cols=103 Identities=17% Similarity=0.263 Sum_probs=86.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDvI 198 (581)
.+.+|||+.||+|..++.+|...++ ..|+++|+|+.+++.+++|++.+++. +++++++|+..++.. ....||.|
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~-~~v~giD~s~~~l~~a~~~~~~~~l~---nv~~~~~Da~~~l~~~~~~~~~d~v 109 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPE-QDFLGIEVHSPGVGACLASAHEEGLS---NLRVMCHDAVEVLHKMIPDNSLRMV 109 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHTTCS---SEEEECSCHHHHHHHHSCTTCEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCC-CeEEEEEecHHHHHHHHHHHHHhCCC---cEEEEECCHHHHHHHHcCCCChheE
Confidence 3568999999999999999987554 47999999999999999999999985 699999999998653 24689999
Q ss_pred ee---CCCCCCh---------HhHHHHHHhccCCCeEEEEe
Q 047386 199 DL---DPYGSPS---------VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dL---DPyGs~~---------~fld~A~~~l~~gGlL~vTa 227 (581)
++ ||+-... .|+..+.+.|++||.|++.+
T Consensus 110 ~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 110 QLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp EEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEe
Confidence 87 7754321 48999999999999998864
No 53
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.02 E-value=4.9e-09 Score=102.58 Aligned_cols=101 Identities=11% Similarity=0.085 Sum_probs=86.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDvId 199 (581)
+.+|||+.||+|..++.++...++ .+|+++|+|+.+++.+++|++.+++. +++++++|+..+... ....||+|+
T Consensus 71 ~~~vLDiG~G~G~~~~~la~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 71 VNTICDVGAGAGFPSLPIKICFPH-LHVTIVDSLNKRITFLEKLSEALQLE---NTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp CCEEEEECSSSCTTHHHHHHHCTT-CEEEEEESCHHHHHHHHHHHHHHTCS---SEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHcCCC---CEEEEeccHHHhcccccccCCccEEE
Confidence 568999999999999999964344 57999999999999999999999984 599999999887531 235899999
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
.+.+.....++..+.+.|++||.|++.
T Consensus 147 ~~~~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 147 ARAVARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EECCSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EeccCCHHHHHHHHHHhcCCCCEEEEE
Confidence 988766678888888999999999886
No 54
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.01 E-value=1e-09 Score=113.40 Aligned_cols=80 Identities=20% Similarity=0.201 Sum_probs=68.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC--CCcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH--PKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~--~~~fDvI 198 (581)
.+.+|||++||+|..++.+|..+.+...|+++|+|+.+++.+++|++.+|+. +++++++|+..+.... ...||+|
T Consensus 102 ~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~---~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 102 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS---CCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC---SEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---eEEEEeCChHhcCccccccCCCCEE
Confidence 4679999999999999999986656678999999999999999999999984 6899999998764321 1469999
Q ss_pred eeCCC
Q 047386 199 DLDPY 203 (581)
Q Consensus 199 dLDPy 203 (581)
++||+
T Consensus 179 l~D~P 183 (309)
T 2b9e_A 179 LLDPS 183 (309)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99985
No 55
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=99.01 E-value=1.7e-10 Score=117.97 Aligned_cols=98 Identities=14% Similarity=0.087 Sum_probs=77.3
Q ss_pred CCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---CCccc
Q 047386 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH---PKEFD 196 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~---~~~fD 196 (581)
+.+..+||+|+|||.+|+++++ +.++++++|.++.+++.|++|++. . ++++++++|+...+... ..+||
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~---~--~~~~V~~~D~~~~L~~l~~~~~~fd 161 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF---N--KKVYVNHTDGVSKLNALLPPPEKRG 161 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT---T--SCEEEECSCHHHHHHHHCSCTTSCE
T ss_pred hcCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc---C--CcEEEEeCcHHHHHHHhcCCCCCcc
Confidence 4566799999999999999999 348999999999999999999974 2 57999999999888642 35799
Q ss_pred EEeeCC-CCCChHhHHHHHH------hccCCCeEEEE
Q 047386 197 VVDLDP-YGSPSVFLDSAIQ------SVADGGMLMCT 226 (581)
Q Consensus 197 vIdLDP-yGs~~~fld~A~~------~l~~gGlL~vT 226 (581)
+|++|| |+.. .....++. .+.++|++.|=
T Consensus 162 LVfiDPPYe~k-~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 162 LIFIDPSYERK-EEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp EEEECCCCCST-THHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred EEEECCCCCCC-cHHHHHHHHHHHhCccCCCeEEEEE
Confidence 999999 7642 22333332 34568888874
No 56
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.01 E-value=1e-09 Score=112.84 Aligned_cols=104 Identities=19% Similarity=0.303 Sum_probs=86.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH--hCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF--NGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~--N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+.||+|..++.+++. .+..+|+++|+|+.+++.+++|+.. +++. ..+++++++|+..++......||+|+
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~-~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYS-SSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-CTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccC-CCcEEEEECcHHHHHhhCCCCceEEE
Confidence 468999999999999999985 3567999999999999999999876 4552 15799999999998876557899999
Q ss_pred eCCCCC--------ChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGS--------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs--------~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++.. ...|+..+.++|++||+|++..
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 998531 2368888999999999999875
No 57
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.00 E-value=2.1e-09 Score=98.65 Aligned_cols=102 Identities=17% Similarity=0.136 Sum_probs=85.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++...+ ..+|+++|+|+.+++.+++|+..+++. +++ ++++|+...+......||+|+++
T Consensus 26 ~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~-~~~~d~~~~~~~~~~~~D~i~~~ 101 (178)
T 3hm2_A 26 HETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVS--DRI-AVQQGAPRAFDDVPDNPDVIFIG 101 (178)
T ss_dssp TEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCT--TSE-EEECCTTGGGGGCCSCCSEEEEC
T ss_pred CCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCC--CCE-EEecchHhhhhccCCCCCEEEEC
Confidence 45899999999999999998643 468999999999999999999999985 478 88899876665433689999998
Q ss_pred CCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.......++..+.+.|++||.|+++.
T Consensus 102 ~~~~~~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 102 GGLTAPGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp C-TTCTTHHHHHHHTCCTTCEEEEEE
T ss_pred CcccHHHHHHHHHHhcCCCCEEEEEe
Confidence 73333678999999999999999875
No 58
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.99 E-value=1.3e-09 Score=106.76 Aligned_cols=102 Identities=25% Similarity=0.254 Sum_probs=88.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++..+....+|+++|+|+.+++.+++|++.+++. +++++.++|+...+. ...||+|++
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~--~~~~D~v~~ 168 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFD--DRVTIKLKDIYEGIE--EENVDHVIL 168 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCT--TTEEEECSCGGGCCC--CCSEEEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCC--CceEEEECchhhccC--CCCcCEEEE
Confidence 4669999999999999999986433578999999999999999999999986 569999999986543 357999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||.. +..++..+.++|++||.|++.+
T Consensus 169 ~~~~-~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 169 DLPQ-PERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp CSSC-GGGGHHHHHHHEEEEEEEEEEE
T ss_pred CCCC-HHHHHHHHHHHcCCCCEEEEEE
Confidence 9853 4679999999999999999874
No 59
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.99 E-value=1.3e-09 Score=110.30 Aligned_cols=102 Identities=19% Similarity=0.303 Sum_probs=85.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh-CC-------CCCCcEEEEehhHHHHHhhCCC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-GS-------VACSKVESHLADARVYMLTHPK 193 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N-~~-------~~~~~v~v~~~DA~~~l~~~~~ 193 (581)
+.+|||+.||+|..++.+++. ++.+|+++|+|+.+++.+++|+..+ ++ . ..+++++++|+..++.. ..
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~-~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGK-HEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTC-CSSEEEEESCHHHHHHH-CC
T ss_pred CCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHhhccccccccccCC-CCcEEEEECchHHHhcc-cC
Confidence 468999999999999999986 6789999999999999999998221 22 2 25799999999998876 67
Q ss_pred cccEEeeCCCCC--------ChHhHHHHHHhccCCCeEEEEe
Q 047386 194 EFDVVDLDPYGS--------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 194 ~fDvIdLDPyGs--------~~~fld~A~~~l~~gGlL~vTa 227 (581)
.||+|++|++.. ...|+..+.+.|++||+|++.+
T Consensus 152 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 152 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 899999998631 2568888999999999999874
No 60
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.99 E-value=4.3e-10 Score=115.28 Aligned_cols=104 Identities=17% Similarity=0.283 Sum_probs=84.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhC---CCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNG---SVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~---~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
+.+|||+.||+|..++..++. .++.+|+++|+|+.+++.+++|+..++ +. ..+++++.+|+..++......||+|
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~-~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYD-DPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTT-CTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhccccccc-CCceEEEEChHHHHHhhcCCCccEE
Confidence 569999999999999999986 568899999999999999999998753 22 1478999999999887656789999
Q ss_pred eeCCC---CCC-----hHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPY---GSP-----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPy---Gs~-----~~fld~A~~~l~~gGlL~vTa 227 (581)
++|++ +.+ ..|+..+.++|++||+|++.+
T Consensus 162 i~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99974 222 568999999999999999875
No 61
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.99 E-value=1.2e-09 Score=112.98 Aligned_cols=104 Identities=15% Similarity=0.238 Sum_probs=87.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH--hCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF--NGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~--N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+.||+|..++.+++. .+..+|+++|+|+.+++.+++|+.. +++. ..+++++++|+..++.....+||+|+
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYE-DKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-STTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccC-CCcEEEEEccHHHHHhhcCCCceEEE
Confidence 568999999999999999986 3567999999999999999999876 4442 15799999999998865557899999
Q ss_pred eCCCC---CC-----hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYG---SP-----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyG---s~-----~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++. .+ ..|+..+.+.|++||+|++.+
T Consensus 195 ~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 195 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp EECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 99842 11 578888999999999999974
No 62
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.98 E-value=1.1e-09 Score=117.67 Aligned_cols=100 Identities=22% Similarity=0.249 Sum_probs=82.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---CCCcccE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT---HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~---~~~~fDv 197 (581)
.+.+|||++||+|.+++.++.. ..+|+++|+|+.|++.+++|++.|++. +++++++|+...+.. ....||+
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~---~v~f~~~d~~~~l~~~~~~~~~fD~ 359 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ---NVTFYHENLEEDVTKQPWAKNGFDK 359 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC---SEEEEECCTTSCCSSSGGGTTCCSE
T ss_pred CCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC---ceEEEECCHHHHhhhhhhhcCCCCE
Confidence 4569999999999999999984 568999999999999999999999984 799999999886532 1357999
Q ss_pred EeeCCCCC-ChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGS-PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs-~~~fld~A~~~l~~gGlL~vTa 227 (581)
|++||+.. ...++. ++..++++++++++|
T Consensus 360 Vv~dPPr~g~~~~~~-~l~~~~p~~ivyvsc 389 (433)
T 1uwv_A 360 VLLDPARAGAAGVMQ-QIIKLEPIRIVYVSC 389 (433)
T ss_dssp EEECCCTTCCHHHHH-HHHHHCCSEEEEEES
T ss_pred EEECCCCccHHHHHH-HHHhcCCCeEEEEEC
Confidence 99999533 344444 455578999999986
No 63
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.97 E-value=3.3e-09 Score=101.71 Aligned_cols=102 Identities=16% Similarity=0.123 Sum_probs=84.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdL 200 (581)
+.+|||+.||+|.+++.+++..++ ..|+++|+|+.+++.+++|+..+++. +++++++|+..+... ....||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~a~~~~~~~~~~---~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQNPD-INYIGIDIQKSVLSYALDKVLEVGVP---NIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHHCCS---SEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCeEEEEccCcCHHHHHHHHHCCC-CCEEEEEcCHHHHHHHHHHHHHcCCC---CEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 568999999999999999997554 57999999999999999999999983 789999999874421 2357999998
Q ss_pred CCCCC------------ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGS------------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs------------~~~fld~A~~~l~~gGlL~vTa 227 (581)
+++.. ...++..+.+.|++||.|++.+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEe
Confidence 86421 1368999999999999999864
No 64
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.97 E-value=6.1e-09 Score=103.72 Aligned_cols=102 Identities=18% Similarity=0.190 Sum_probs=86.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDvId 199 (581)
+.+|||+.||||..|+.+|...+ ..+|+++|+|+.+++.+++|++.+++. +++++++|+..+... ....||+|+
T Consensus 81 ~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~---~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 81 PLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLK---GARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp SCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCS---SEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred CCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC---ceEEEECcHHHhhcccccCCCceEEE
Confidence 56899999999999999998754 458999999999999999999999985 599999999887642 236899999
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
..-......++..+.+.|++||.|++..
T Consensus 157 s~a~~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 157 ARAVAPLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EESSCCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECCcCCHHHHHHHHHHHcCCCeEEEEEe
Confidence 8765555678888889999999988753
No 65
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.96 E-value=1.7e-09 Score=113.56 Aligned_cols=102 Identities=16% Similarity=0.147 Sum_probs=83.3
Q ss_pred CCCCeEEEecCcccHHHHHHhhhcCCc-cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccE
Q 047386 120 LKPPRVLEALSASGLRALRYAREVEGI-GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDV 197 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~~Ga-~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDv 197 (581)
..+.+|||+. |+|.+++.+++. |. .+|+++|+|+.+++.+++|++.+|+. +++++++|+...+.. ....||+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~--~~~~~v~~vDi~~~~l~~a~~~~~~~g~~---~v~~~~~D~~~~l~~~~~~~fD~ 244 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLS--GLPKRIAVLDIDERLTKFIEKAANEIGYE---DIEIFTFDLRKPLPDYALHKFDT 244 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHH--TCCSEEEEECSCHHHHHHHHHHHHHHTCC---CEEEECCCTTSCCCTTTSSCBSE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHh--CCCCEEEEEECCHHHHHHHHHHHHHcCCC---CEEEEEChhhhhchhhccCCccE
Confidence 3577999999 999999999885 54 78999999999999999999999984 699999999874432 2347999
Q ss_pred EeeCCC-CC--ChHhHHHHHHhccCCC-eEEEEe
Q 047386 198 VDLDPY-GS--PSVFLDSAIQSVADGG-MLMCTA 227 (581)
Q Consensus 198 IdLDPy-Gs--~~~fld~A~~~l~~gG-lL~vTa 227 (581)
|++||+ +. ...|+..+.++|++|| ++++++
T Consensus 245 Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 245 FITDPPETLEAIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp EEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred EEECCCCchHHHHHHHHHHHHHcccCCeEEEEEE
Confidence 999984 32 2468888999999999 545543
No 66
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.96 E-value=2.2e-09 Score=107.31 Aligned_cols=102 Identities=21% Similarity=0.287 Sum_probs=87.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.+++.+....+|+++|+|+.+++.+++|++.+++. .++++.++|+...+. ...||+|++
T Consensus 112 ~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~--~~~~D~V~~ 187 (277)
T 1o54_A 112 EGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLI--ERVTIKVRDISEGFD--EKDVDALFL 187 (277)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCG--GGEEEECCCGGGCCS--CCSEEEEEE
T ss_pred CCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC--CCEEEEECCHHHccc--CCccCEEEE
Confidence 3569999999999999999986432468999999999999999999999985 579999999987642 357999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+ .+..++..+.++|++||.|++..
T Consensus 188 ~~~-~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 188 DVP-DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp CCS-CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred CCc-CHHHHHHHHHHHcCCCCEEEEEe
Confidence 985 34689999999999999999975
No 67
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.96 E-value=2e-09 Score=107.69 Aligned_cols=101 Identities=20% Similarity=0.311 Sum_probs=83.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||||..++.++.+.++ .+|+++|+|+.+++.+++|++.+++. +++++++|+...+. ...||+|+.
T Consensus 109 ~~~~vLDlG~GsG~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~n~~~~~~~---~v~~~~~d~~~~~~--~~~fD~Iv~ 182 (276)
T 2b3t_A 109 QPCRILDLGTGTGAIALALASERPD-CEIIAVDRMPDAVSLAQRNAQHLAIK---NIHILQSDWFSALA--GQQFAMIVS 182 (276)
T ss_dssp SCCEEEEETCTTSHHHHHHHHHCTT-SEEEEECSSHHHHHHHHHHHHHHTCC---SEEEECCSTTGGGT--TCCEEEEEE
T ss_pred CCCEEEEecCCccHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEEcchhhhcc--cCCccEEEE
Confidence 3568999999999999999987544 58999999999999999999999984 68999999977653 357999999
Q ss_pred CC-CCCC----------------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YGSP----------------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yGs~----------------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
+| |... ..++..+.+.|++||+|+++.
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~ 238 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEH 238 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 97 4221 235667778999999999973
No 68
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.96 E-value=3.5e-10 Score=109.98 Aligned_cols=99 Identities=24% Similarity=0.304 Sum_probs=80.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. | .+|+++|+|+.+++.+++|++.+++. .+++++++|+..+.. ...||+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~--~-~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~--~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALT--G-MRVIAIDIDPVKIALARNNAEVYGIA--DKIEFICGDFLLLAS--FLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHGG--GCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCC--cCeEEEECChHHhcc--cCCCCEEEE
Confidence 5779999999999999999984 5 78999999999999999999999985 479999999999873 358999999
Q ss_pred CC-CCCCh---HhHHHHHHhccCCCeEEEE
Q 047386 201 DP-YGSPS---VFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 201 DP-yGs~~---~fld~A~~~l~~gGlL~vT 226 (581)
|| |.... ..+....+.|++||++++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 151 SPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp CCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred CCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 98 44321 1222345678888886554
No 69
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.96 E-value=5.2e-09 Score=96.39 Aligned_cols=101 Identities=19% Similarity=0.212 Sum_probs=87.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. + .+|+++|+|+.+++.+++|+..+++. .++++.++|+...+... ..||+|++
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~--~-~~v~~~D~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~~~-~~~D~v~~ 106 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGR--V-RRVYAIDRNPEAISTTEMNLQRHGLG--DNVTLMEGDAPEALCKI-PDIDIAVV 106 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTT--S-SEEEEEESCHHHHHHHHHHHHHTTCC--TTEEEEESCHHHHHTTS-CCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHh--c-CEEEEEECCHHHHHHHHHHHHHcCCC--cceEEEecCHHHhcccC-CCCCEEEE
Confidence 3569999999999999999985 4 78999999999999999999999984 47899999998866432 47999999
Q ss_pred CCC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPy-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
++. .....++..+.+.|++||.|++..
T Consensus 107 ~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 107 GGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp SCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 974 555688999999999999999875
No 70
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.95 E-value=7.9e-10 Score=103.99 Aligned_cols=101 Identities=21% Similarity=0.260 Sum_probs=63.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---CCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT---HPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~---~~~~fDvI 198 (581)
+.+|||+.||+|..++.++...++ .+|+++|+|+.+++.+++|+..+++ +++++++|+...+.. ....||+|
T Consensus 31 ~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~fD~i 105 (215)
T 4dzr_A 31 GTRVIDVGTGSGCIAVSIALACPG-VSVTAVDLSMDALAVARRNAERFGA----VVDWAAADGIEWLIERAERGRPWHAI 105 (215)
T ss_dssp TEEEEEEESSBCHHHHHHHHHCTT-EEEEEEECC-----------------------CCHHHHHHHHHHHHHTTCCBSEE
T ss_pred CCEEEEecCCHhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHhCC----ceEEEEcchHhhhhhhhhccCcccEE
Confidence 558999999999999999997433 4799999999999999999999876 478999999986653 23689999
Q ss_pred eeCC-CCCC-----------------------------hHhHHHHHHhccCCCe-EEEEe
Q 047386 199 DLDP-YGSP-----------------------------SVFLDSAIQSVADGGM-LMCTA 227 (581)
Q Consensus 199 dLDP-yGs~-----------------------------~~fld~A~~~l~~gGl-L~vTa 227 (581)
+.|| |... ..++..+.+.|++||+ ++++.
T Consensus 106 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 106 VSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp EECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred EECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 9998 4221 3445556688999999 66653
No 71
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.94 E-value=4.2e-10 Score=110.67 Aligned_cols=104 Identities=22% Similarity=0.219 Sum_probs=81.3
Q ss_pred CCeEEEecCcccHHHHHHhhhc-CCccEEEEEeCCHHHHHHHHHHHHHh---CCCCCCc---------------------
Q 047386 122 PPRVLEALSASGLRALRYAREV-EGIGQVVALDNDKASVEACRRNIKFN---GSVACSK--------------------- 176 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~-~Ga~~V~anD~s~~Ave~i~~Ni~~N---~~~~~~~--------------------- 176 (581)
+.+|||+.||||.+++.++..+ .+..+|+++|+|+.+++.+++|+..+ ++. .+
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLT--ARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHH--HHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhcccc--ccchhhhhhhhhcccccchhhhh
Confidence 4589999999999999998852 12358999999999999999999877 553 12
Q ss_pred ----EE-------------EEehhHHHHHhh----CCCcccEEeeCC-CCCC------------hHhHHHHHHhccCCCe
Q 047386 177 ----VE-------------SHLADARVYMLT----HPKEFDVVDLDP-YGSP------------SVFLDSAIQSVADGGM 222 (581)
Q Consensus 177 ----v~-------------v~~~DA~~~l~~----~~~~fDvIdLDP-yGs~------------~~fld~A~~~l~~gGl 222 (581)
++ +.++|+...+.. ....||+|+.+| |... ..++..+.+.|++||+
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 209 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAV 209 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCE
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcE
Confidence 55 889998775521 234799999998 4321 1678888899999999
Q ss_pred EEEEe
Q 047386 223 LMCTA 227 (581)
Q Consensus 223 L~vTa 227 (581)
|+++.
T Consensus 210 l~~~~ 214 (250)
T 1o9g_A 210 IAVTD 214 (250)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 99964
No 72
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.94 E-value=1.3e-09 Score=115.79 Aligned_cols=101 Identities=21% Similarity=0.327 Sum_probs=83.8
Q ss_pred CCCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 119 QLKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
.+++.+|||+-||||++|+.+|+ .||++|+++|.|+ .++.+++|++.|++. ++|+++++|+..+- ..++||+|
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~--aGA~~V~ave~s~-~~~~a~~~~~~n~~~--~~i~~i~~~~~~~~--lpe~~Dvi 153 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQ--AGARRVYAVEASA-IWQQAREVVRFNGLE--DRVHVLPGPVETVE--LPEQVDAI 153 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHH--TTCSEEEEEECST-THHHHHHHHHHTTCT--TTEEEEESCTTTCC--CSSCEEEE
T ss_pred hcCCCEEEEeCCCccHHHHHHHH--hCCCEEEEEeChH-HHHHHHHHHHHcCCC--ceEEEEeeeeeeec--CCccccEE
Confidence 35788999999999999999998 4999999999997 678999999999997 78999999987653 35789999
Q ss_pred eeCCCCCC-------hHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSP-------SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~-------~~fld~A~~~l~~gGlL~vT 226 (581)
+-++.|.. ..++.+.-++|++||+++-.
T Consensus 154 vsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~ 188 (376)
T 4hc4_A 154 VSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPA 188 (376)
T ss_dssp ECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESC
T ss_pred EeecccccccccchhhhHHHHHHhhCCCCceECCc
Confidence 99886542 13455555899999987653
No 73
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.94 E-value=2.4e-09 Score=104.66 Aligned_cols=105 Identities=21% Similarity=0.295 Sum_probs=88.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---C--Ccc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH---P--KEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~---~--~~f 195 (581)
.+.+|||+.||+|..++.++..++...+|+++|+|+.+++.+++|++.+++. ++++++++|+...+... . ..|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~--~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVA--EKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 4569999999999999999987543358999999999999999999999985 57999999998876542 1 579
Q ss_pred cEEeeCCC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDPY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDPy-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+|++|.. .....+++.+.++|++||+|++..
T Consensus 150 D~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 150 DLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp EEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 99999975 223578889999999999999864
No 74
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.94 E-value=1.8e-09 Score=104.79 Aligned_cols=103 Identities=27% Similarity=0.381 Sum_probs=88.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC--CCcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH--PKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~--~~~fDvI 198 (581)
.+.+|||+.||+|..++.++...+ ..+|+++|+|+.+++.+++|++.+++. .+++++++|+...+... ...||+|
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~fD~I 130 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLE--SRIELLFGDALQLGEKLELYPLFDVL 130 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCT--TTEEEECSCGGGSHHHHTTSCCEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECCHHHHHHhcccCCCccEE
Confidence 356999999999999999998755 368999999999999999999999985 57999999998765433 3579999
Q ss_pred eeCCC-CCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPY-GSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPy-Gs~~~fld~A~~~l~~gGlL~vT 226 (581)
++|+. .....++..+.+.|++||+|++.
T Consensus 131 ~~~~~~~~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 131 FIDAAKGQYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp EEEGGGSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EECCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 99974 34467889999999999999986
No 75
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.93 E-value=6.1e-09 Score=109.90 Aligned_cols=107 Identities=15% Similarity=0.139 Sum_probs=85.7
Q ss_pred CCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC---CCcEEEEehhHHHHHhhCCCccc
Q 047386 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA---CSKVESHLADARVYMLTHPKEFD 196 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~---~~~v~v~~~DA~~~l~~~~~~fD 196 (581)
..|.+|||++||.|+-++..|.. .....|+|||+|+.-++.+++|++..++.. ..++++.+.|+..+-......||
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~-~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD 225 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYD 225 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHT-TCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEE
T ss_pred CCCCEEEEecCCccHHHHHHHHh-cCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCC
Confidence 35679999999999999998864 234579999999999999999999987631 14689999999877654567899
Q ss_pred EEeeCCCCCCh----------------------------HhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPS----------------------------VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~----------------------------~fld~A~~~l~~gGlL~vTa 227 (581)
.|.+|++-|.. ..|+.|+++|++||.|..+.
T Consensus 226 ~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsT 284 (359)
T 4fzv_A 226 RVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYST 284 (359)
T ss_dssp EEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEe
Confidence 99999984321 45678999999999876644
No 76
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.93 E-value=6e-09 Score=103.36 Aligned_cols=136 Identities=13% Similarity=0.171 Sum_probs=102.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCC-ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEG-IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~G-a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
+.+|||+-||||.++|.+++. | +.+|+++|+|+.|++.+++|++.|++. +++++.++|+..-+.. ...||+|++
T Consensus 16 g~~VlDIGtGsG~l~i~la~~--~~~~~V~avDi~~~al~~A~~N~~~~gl~--~~i~~~~~d~l~~l~~-~~~~D~Ivi 90 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVER--GQIKSAIAGEVVEGPYQSAVKNVEAHGLK--EKIQVRLANGLAAFEE-TDQVSVITI 90 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHT--TSEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHh--CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEECchhhhccc-CcCCCEEEE
Confidence 458999999999999999996 4 678999999999999999999999996 6899999998766532 126999886
Q ss_pred CCCCCC--hHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCCce
Q 047386 201 DPYGSP--SVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYI 278 (581)
Q Consensus 201 DPyGs~--~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r~i 278 (581)
-==|.. ..+++.+...|+++|.|.+... . + ...+.+....+|..|
T Consensus 91 aG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~--------~---------------------~----~~~vr~~L~~~Gf~i 137 (225)
T 3kr9_A 91 AGMGGRLIARILEEGLGKLANVERLILQPN--------N---------------------R----EDDLRIWLQDHGFQI 137 (225)
T ss_dssp EEECHHHHHHHHHHTGGGCTTCCEEEEEES--------S---------------------C----HHHHHHHHHHTTEEE
T ss_pred cCCChHHHHHHHHHHHHHhCCCCEEEEECC--------C---------------------C----HHHHHHHHHHCCCEE
Confidence 322221 3678888888999999988641 1 1 233445556677776
Q ss_pred EE-EeecccCceEEEEEE
Q 047386 279 EP-VLSVQMDFYVRVFVR 295 (581)
Q Consensus 279 ~P-lls~s~dhY~RvfVr 295 (581)
.= .+-.-.++||.+++-
T Consensus 138 ~~e~lv~e~~~~Yeii~~ 155 (225)
T 3kr9_A 138 VAESILEEAGKFYEILVV 155 (225)
T ss_dssp EEEEEEEETTEEEEEEEE
T ss_pred EEEEEEEECCEEEEEEEE
Confidence 65 355556778887653
No 77
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.92 E-value=9.2e-09 Score=99.42 Aligned_cols=103 Identities=19% Similarity=0.202 Sum_probs=85.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvId 199 (581)
.+.+|||+.||+|.+++.+|...++ ..|+++|+|+.+++.+++|++.+++. +++++++|+..+... ....||.|+
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~-~~v~giD~s~~~l~~a~~~~~~~~~~---nv~~~~~d~~~l~~~~~~~~~d~v~ 113 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPD-INYIGIELFKSVIVTAVQKVKDSEAQ---NVKLLNIDADTLTDVFEPGEVKRVY 113 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTT-SEEEEECSCHHHHHHHHHHHHHSCCS---SEEEECCCGGGHHHHCCTTSCCEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCC-CCEEEEEechHHHHHHHHHHHHcCCC---CEEEEeCCHHHHHhhcCcCCcCEEE
Confidence 3568999999999999999987554 57999999999999999999999974 699999999875321 235799997
Q ss_pred e---CCCCC---------ChHhHHHHHHhccCCCeEEEEe
Q 047386 200 L---DPYGS---------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 L---DPyGs---------~~~fld~A~~~l~~gGlL~vTa 227 (581)
+ ||+.. ...|+..+.+.|++||.|++.+
T Consensus 114 ~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 114 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred EECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 6 66533 2468999999999999999874
No 78
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.92 E-value=2.4e-09 Score=115.55 Aligned_cols=104 Identities=26% Similarity=0.256 Sum_probs=85.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCC-CcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHP-KEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~-~~fDvId 199 (581)
.+.+|||+.||+|..++.++...++...|+++|+|+..++.+++|++.+|+. +++++++|+..+..... ..||+|+
T Consensus 259 ~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~---~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 259 PGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK---IVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC---SEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC---cEEEEEcChhhcchhhccCCCCEEE
Confidence 4679999999999999999987655578999999999999999999999984 68999999876542122 5799999
Q ss_pred eCCCCCC--------------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSP--------------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~--------------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
+||+-+. ..+++.+.+.|++||.|++..
T Consensus 336 ~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~t 389 (450)
T 2yxl_A 336 LDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTT 389 (450)
T ss_dssp EECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred EcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 9985321 246888899999999987754
No 79
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.91 E-value=6.1e-09 Score=96.09 Aligned_cols=100 Identities=13% Similarity=0.223 Sum_probs=83.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. ...|+++|+|+.+++.+++|+..+++.. .+++++++|+...+. ...||+|+++
T Consensus 53 ~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~-~~~~~~~~d~~~~~~--~~~~D~v~~~ 126 (194)
T 1dus_A 53 DDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDN-YDIRVVHSDLYENVK--DRKYNKIITN 126 (194)
T ss_dssp TCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTT-SCEEEEECSTTTTCT--TSCEEEEEEC
T ss_pred CCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCc-cceEEEECchhcccc--cCCceEEEEC
Confidence 558999999999999999985 4589999999999999999999998751 148999999877553 4579999999
Q ss_pred C-CCC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-YGS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-yGs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
| |.. ...++..+.+.|++||.|+++.
T Consensus 127 ~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 157 (194)
T 1dus_A 127 PPIRAGKEVLHRIIEEGKELLKDNGEIWVVI 157 (194)
T ss_dssp CCSTTCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcccchhHHHHHHHHHHHHcCCCCEEEEEE
Confidence 8 432 1367788889999999999985
No 80
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.91 E-value=5.9e-09 Score=103.74 Aligned_cols=138 Identities=14% Similarity=0.106 Sum_probs=103.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||||.++|.+++. ..+.+|+++|+|+.|++.+++|++.|++. +++++.++|+...+.. ...||+|++-
T Consensus 22 g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~--~~I~~~~gD~l~~~~~-~~~~D~Ivia 97 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLT--SKIDVRLANGLSAFEE-ADNIDTITIC 97 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCG-GGCCCEEEEE
T ss_pred CCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCC--CcEEEEECchhhcccc-ccccCEEEEe
Confidence 458999999999999999996 22678999999999999999999999996 6899999999877642 2369998874
Q ss_pred CCCC--ChHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCCceE
Q 047386 202 PYGS--PSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIE 279 (581)
Q Consensus 202 PyGs--~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r~i~ 279 (581)
=-|. -..+|+.+...++++|.|.+.. .. + ...+.+.....|..|.
T Consensus 98 GmGg~lI~~IL~~~~~~l~~~~~lIlqp--------~~------------------~-------~~~lr~~L~~~Gf~i~ 144 (230)
T 3lec_A 98 GMGGRLIADILNNDIDKLQHVKTLVLQP--------NN------------------R-------EDDLRKWLAANDFEIV 144 (230)
T ss_dssp EECHHHHHHHHHHTGGGGTTCCEEEEEE--------SS------------------C-------HHHHHHHHHHTTEEEE
T ss_pred CCchHHHHHHHHHHHHHhCcCCEEEEEC--------CC------------------C-------hHHHHHHHHHCCCEEE
Confidence 3332 2367787788889999888753 21 1 3345566667787776
Q ss_pred E-EeecccCceEEEEEEE
Q 047386 280 P-VLSVQMDFYVRVFVRI 296 (581)
Q Consensus 280 P-lls~s~dhY~RvfVrV 296 (581)
= .+-.-.++||.|++-.
T Consensus 145 ~E~lv~e~~~~Yeii~~~ 162 (230)
T 3lec_A 145 AEDILTENDKRYEILVVK 162 (230)
T ss_dssp EEEEEEC--CEEEEEEEE
T ss_pred EEEEEEECCEEEEEEEEE
Confidence 5 4555567888887643
No 81
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.91 E-value=5.1e-09 Score=102.26 Aligned_cols=105 Identities=19% Similarity=0.251 Sum_probs=87.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---------
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH--------- 191 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~--------- 191 (581)
.+.+|||+.||+|..++.+++..+...+|+++|+|+.+++.+++|++.+++. +++++.++|+...+...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~--~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLE--NKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCG--GGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCC--CCEEEEECCHHHHHHHHHhhcccccc
Confidence 3569999999999999999987543568999999999999999999999985 57999999998866432
Q ss_pred ------C-CcccEEeeCCC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 192 ------P-KEFDVVDLDPY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 192 ------~-~~fDvIdLDPy-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
. ..||+|++|.. .....++..+.+.|++||+|++..
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 57999999953 122367888999999999999864
No 82
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.91 E-value=3.5e-09 Score=104.11 Aligned_cols=106 Identities=10% Similarity=0.111 Sum_probs=82.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh--------CCCCCCcEEEEehhHHHHHhh--C
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN--------GSVACSKVESHLADARVYMLT--H 191 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N--------~~~~~~~v~v~~~DA~~~l~~--~ 191 (581)
+.+|||+.||+|.+++.++...+ -..|+++|+|+.+++.+++|++.| ++. +++++++|+..+|.. .
T Consensus 50 ~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~---nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 50 KVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ---NINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp CEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT---TEEEEECCTTSCGGGTSC
T ss_pred CCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC---cEEEEeccHHHHHHHhcc
Confidence 56899999999999999998633 248999999999999999999998 763 689999999876642 1
Q ss_pred CCcccEEee---CCCCC---------ChHhHHHHHHhccCCCeEEEEeccchh
Q 047386 192 PKEFDVVDL---DPYGS---------PSVFLDSAIQSVADGGMLMCTATDMAV 232 (581)
Q Consensus 192 ~~~fDvIdL---DPyGs---------~~~fld~A~~~l~~gGlL~vTaTD~a~ 232 (581)
...||.|++ ||+-. ...++..+.+.|++||+|++. ||...
T Consensus 126 ~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~-td~~~ 177 (246)
T 2vdv_E 126 KGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI-TDVKD 177 (246)
T ss_dssp TTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE-ESCHH
T ss_pred ccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE-eccHH
Confidence 346777753 33211 137899999999999999884 34433
No 83
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.90 E-value=7e-09 Score=100.59 Aligned_cols=100 Identities=19% Similarity=0.155 Sum_probs=86.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.+++. ..+|+++|+|+.+++.+++|++.+++. .++++.++|+...+. ....||+|++
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~~~D~v~~ 164 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLG--KNVKFFNVDFKDAEV-PEGIFHAAFV 164 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCC--TTEEEECSCTTTSCC-CTTCBSEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC--CcEEEEEcChhhccc-CCCcccEEEE
Confidence 3569999999999999999985 468999999999999999999999885 578999999877541 1357999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||. .+..++..+.++|++||.|++..
T Consensus 165 ~~~-~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 165 DVR-EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp CSS-CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred CCc-CHHHHHHHHHHHcCCCCEEEEEe
Confidence 985 45688999999999999999975
No 84
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.90 E-value=2.5e-09 Score=114.53 Aligned_cols=102 Identities=25% Similarity=0.267 Sum_probs=84.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvId 199 (581)
.+.+|||+.||+|..++.++...++ ..|+++|+|+..++.+++|++.+|+. ++++++|+..+... ....||+|+
T Consensus 246 ~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~----~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 246 NGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK----ATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC----CEEEECCTTCTHHHHTTCCEEEEE
T ss_pred CcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC----eEEEeCchhhchhhcccCCCCEEE
Confidence 5679999999999999999987544 68999999999999999999999973 57899998765421 235799999
Q ss_pred eCCCCCC--------------------------hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSP--------------------------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~--------------------------~~fld~A~~~l~~gGlL~vTa 227 (581)
+||+-+. ..+++.+.+.|++||.|+++.
T Consensus 321 ~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvyst 374 (429)
T 1sqg_A 321 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYAT 374 (429)
T ss_dssp EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 9985332 256888899999999988754
No 85
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.90 E-value=5.8e-09 Score=107.41 Aligned_cols=104 Identities=21% Similarity=0.266 Sum_probs=86.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH-hC--CCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF-NG--SVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~-N~--~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
+.+|||+-||+|..++.+++. .+..+|+++|+|+.+++.+++|+.. |+ +. ..+++++++|+..++......||+|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKH-PTVEKAVMVDIDGELVEVAKRHMPEWHQGAFD-DPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTS-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG-CTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCeEEEEcCCcCHHHHHHHhc-CCCCEEEEEECCHHHHHHHHHHhHhhcccccc-CCceEEEEchHHHHHHhcCCCccEE
Confidence 458999999999999999985 3567999999999999999999874 33 22 1579999999999887656789999
Q ss_pred eeCCCCC-----------ChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYGS-----------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyGs-----------~~~fld~A~~~l~~gGlL~vTa 227 (581)
++|++.. ...|+..+.++|++||+|++.+
T Consensus 156 i~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 156 IIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred EECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 9998532 2478889999999999999974
No 86
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.90 E-value=3.1e-09 Score=112.72 Aligned_cols=99 Identities=22% Similarity=0.377 Sum_probs=84.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.+++. |+ +|+++|+|+.+++.+++|+..|++. ++++++|+..+... ...||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~-~V~gvDis~~al~~A~~n~~~~~~~----v~~~~~D~~~~~~~-~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GA-EVVGVEDDLASVLSLQKGLEANALK----AQALHSDVDEALTE-EARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TC-EEEEEESBHHHHHHHHHHHHHTTCC----CEEEECSTTTTSCT-TCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CC-EEEEEECCHHHHHHHHHHHHHcCCC----eEEEEcchhhcccc-CCCeEEEEE
Confidence 5679999999999999999985 65 8999999999999999999999974 68999999877642 368999999
Q ss_pred CC-CCC--------ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YGS--------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yGs--------~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| |.. ...++..+.+.|++||.|++.+
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 98 432 1257888899999999999975
No 87
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.89 E-value=2.1e-08 Score=96.58 Aligned_cols=100 Identities=19% Similarity=0.116 Sum_probs=80.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH--hhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM--LTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l--~~~~~~fDvId 199 (581)
+.+|||+.||+|..++.++..++...+|+++|+|+.+++.+++|++.+ .+++++++|+.... ......||+|+
T Consensus 74 ~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 74 GKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp TCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCCceEEE
Confidence 568999999999999999986532368999999999999999999865 25889999997642 22235799999
Q ss_pred eCCCCCCh--HhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSPS--VFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~~--~fld~A~~~l~~gGlL~vT 226 (581)
+|+..... .++..+.+.|++||.|++.
T Consensus 149 ~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 149 EDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99863322 4588889999999999987
No 88
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.89 E-value=3.9e-09 Score=111.61 Aligned_cols=104 Identities=19% Similarity=0.217 Sum_probs=84.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||++||+|.+++.+++..+ ..+|+++|+|+.+++.+++|++.|++....+++++.+|+...+. ...||+|++
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~--~~~fD~Ii~ 298 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE--PFRFNAVLC 298 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--TTCEEEEEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--CCCeeEEEE
Confidence 346999999999999999999744 46899999999999999999999997522357889999877542 358999999
Q ss_pred CC-CCC--------ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YGS--------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yGs--------~~~fld~A~~~l~~gGlL~vTa 227 (581)
|| |.. ...++..+.+.|++||.|++.+
T Consensus 299 nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 299 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp CCCC-------CCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 98 431 1257888899999999999964
No 89
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.88 E-value=4.5e-09 Score=108.68 Aligned_cols=104 Identities=18% Similarity=0.278 Sum_probs=85.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh--CCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN--GSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N--~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+-+|+|..++.+++. .+..+|+++|+|+.+++.+++|+..+ ++. ..+++++.+|+..++......||+|+
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~-~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKH-ESVEKVTMCEIDEMVIDVAKKFLPGMSCGFS-HPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTC-TTCCEEEEECSCHHHHHHHHHHCTTTSGGGG-CTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCEEEEEcCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHHhccccC-CCCEEEEEChHHHHHHhcCCCceEEE
Confidence 468999999999999999985 34679999999999999999998754 432 25799999999998866557899999
Q ss_pred eCCCCC---C-----hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGS---P-----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs---~-----~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++.. + ..|+..+.++|++||+|++.+
T Consensus 187 ~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 187 TDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp ECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 998521 1 478888899999999999975
No 90
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.88 E-value=6.5e-09 Score=110.46 Aligned_cols=105 Identities=18% Similarity=0.147 Sum_probs=79.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCc-------------------------------------cEEEEEeCCHHHHHHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGI-------------------------------------GQVVALDNDKASVEACR 163 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga-------------------------------------~~V~anD~s~~Ave~i~ 163 (581)
.+..+||+|||||.+.|++|....+. ..|+++|+|+.+++.++
T Consensus 194 ~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar 273 (384)
T 3ldg_A 194 PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEIAR 273 (384)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHHHH
Confidence 35689999999999999999753321 35999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCC-CCCCh-------HhHHHHHHhccC--CCeEEEEecc
Q 047386 164 RNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDP-YGSPS-------VFLDSAIQSVAD--GGMLMCTATD 229 (581)
Q Consensus 164 ~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDP-yGs~~-------~fld~A~~~l~~--gGlL~vTaTD 229 (581)
+|++.+|+. +.+++.++|+..+.. ...||+|+.|| ||... .+.....+.++. ||-++|-+.|
T Consensus 274 ~Na~~~gl~--~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~ 345 (384)
T 3ldg_A 274 KNAREVGLE--DVVKLKQMRLQDFKT--NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTND 345 (384)
T ss_dssp HHHHHTTCT--TTEEEEECCGGGCCC--CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESC
T ss_pred HHHHHcCCC--CceEEEECChHHCCc--cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECC
Confidence 999999996 579999999988653 35899999998 76421 222222334444 7777765533
No 91
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.88 E-value=3.4e-09 Score=111.59 Aligned_cols=101 Identities=16% Similarity=0.217 Sum_probs=79.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCc-cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGI-GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga-~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+|||++||||.+++.++.. +. .+|+++|+|+.+++.+++|++.+|+. +++++.++|+..+... ...||+|+
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~--~~~~~v~g~Dis~~~l~~A~~n~~~~gl~--~~i~~~~~D~~~~~~~-~~~fD~Ii 291 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALR--RYSGEIIGIEKYRKHLIGAEMNALAAGVL--DKIKFIQGDATQLSQY-VDSVDFAI 291 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHT--TCCSCEEEEESCHHHHHHHHHHHHHTTCG--GGCEEEECCGGGGGGT-CSCEEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHHHcCCC--CceEEEECChhhCCcc-cCCcCEEE
Confidence 4668999999999999999985 43 37999999999999999999999985 5799999999887532 35799999
Q ss_pred eCC-CCCC-----------hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDP-YGSP-----------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDP-yGs~-----------~~fld~A~~~l~~gGlL~vTa 227 (581)
.|| ||.. ..+++.+.+.+ .|+++++++
T Consensus 292 ~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i~~ 330 (373)
T 3tm4_A 292 SNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFITT 330 (373)
T ss_dssp EECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEEES
T ss_pred ECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEEEC
Confidence 997 6642 23555556666 555566653
No 92
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.88 E-value=2.6e-08 Score=91.16 Aligned_cols=96 Identities=13% Similarity=0.063 Sum_probs=81.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++. ...+|+++|+|+.+++.+++|++.+++. +++++++|+...+.. ..||+|+++
T Consensus 36 ~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~~~~~~~d~~~~~~~--~~~D~i~~~ 107 (183)
T 2yxd_A 36 DDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIK---NCQIIKGRAEDVLDK--LEFNKAFIG 107 (183)
T ss_dssp TCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCC---SEEEEESCHHHHGGG--CCCSEEEEC
T ss_pred CCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCC---cEEEEECCccccccC--CCCcEEEEC
Confidence 56899999999999999998 3568999999999999999999999973 689999999885543 579999999
Q ss_pred CCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+......++..+.+. +||.|+++.
T Consensus 108 ~~~~~~~~l~~~~~~--~gG~l~~~~ 131 (183)
T 2yxd_A 108 GTKNIEKIIEILDKK--KINHIVANT 131 (183)
T ss_dssp SCSCHHHHHHHHHHT--TCCEEEEEE
T ss_pred CcccHHHHHHHHhhC--CCCEEEEEe
Confidence 874445667666565 999999875
No 93
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.87 E-value=6e-09 Score=108.27 Aligned_cols=101 Identities=18% Similarity=0.254 Sum_probs=86.2
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEeeC
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDLD 201 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLD 201 (581)
.+|||+-+|+|..+..+++..+++ +|+++|+|+..++++++|+.++.- .+++++++|+..++... ..+||+|++|
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~-~v~~VEidp~vi~~Ar~~~~~~~~---~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQS-RNTVVELDAELARLSREWFDIPRA---PRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTC-EEEEEESCHHHHHHHHHHSCCCCT---TTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCc-EEEEEECCHHHHHHHHHhccccCC---CceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 489999999999999999865776 799999999999999999876532 57999999999998754 4689999999
Q ss_pred CCCC---C-----hHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGS---P-----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs---~-----~~fld~A~~~l~~gGlL~vTa 227 (581)
.|.. + ..|+..+.++|++||+|++..
T Consensus 167 ~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 167 VFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp CSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 7532 2 478999999999999999875
No 94
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.87 E-value=9e-09 Score=107.37 Aligned_cols=104 Identities=21% Similarity=0.274 Sum_probs=86.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh--CCCCCCcEEEEehhHHHHHhhC-CCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN--GSVACSKVESHLADARVYMLTH-PKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N--~~~~~~~v~v~~~DA~~~l~~~-~~~fDvI 198 (581)
+.+|||+-||+|..++.+++. .+..+|+++|+|+.+++.+++|+..+ ++. ..+++++++|+..++... ...||+|
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~-~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~-~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARH-ASIEQIDMCEIDKMVVDVSKQFFPDVAIGYE-DPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-STTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCEEEEECCCccHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHHHhhccccC-CCcEEEEECCHHHHHHhccCCCccEE
Confidence 568999999999999999986 45679999999999999999999763 442 147999999999988643 3689999
Q ss_pred eeCCCC---C-----ChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYG---S-----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyG---s-----~~~fld~A~~~l~~gGlL~vTa 227 (581)
++|++. . ...|+..+.++|++||+|++.+
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999852 1 2468888999999999999864
No 95
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.86 E-value=7.3e-09 Score=105.04 Aligned_cols=104 Identities=14% Similarity=0.215 Sum_probs=86.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhC--CCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNG--SVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~--~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+-||+|..+..+++. .+..+|+++|+|+.+++.+++|+..++ +. ..+++++++|+..++......||+|+
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~-~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYE-DKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGG-STTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccC-CCcEEEEECChHHHHHhCCCCceEEE
Confidence 468999999999999999985 456899999999999999999987543 21 15799999999998866567899999
Q ss_pred eCCCC---CC-----hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYG---SP-----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyG---s~-----~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++. .+ ..|+..+.++|++||+|++.+
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 98742 11 478888999999999999874
No 96
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.86 E-value=4.7e-09 Score=105.03 Aligned_cols=101 Identities=15% Similarity=0.158 Sum_probs=85.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh-CCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-GSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N-~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+|||+.||+|..++.++..+....+|+++|+|+.+++.+++|++.+ +. .++++.++|+...+. ...||+|+
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~---~~v~~~~~d~~~~~~--~~~fD~Vi 184 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI---GNVRTSRSDIADFIS--DQMYDAVI 184 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC---TTEEEECSCTTTCCC--SCCEEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC---CcEEEEECchhccCc--CCCccEEE
Confidence 3569999999999999999986433468999999999999999999998 85 478999999977432 35799999
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|++. +..+++.+.+.|++||.|++.+
T Consensus 185 ~~~~~-~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 185 ADIPD-PWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp ECCSC-GGGSHHHHHHTEEEEEEEEEEE
T ss_pred EcCcC-HHHHHHHHHHHcCCCCEEEEEe
Confidence 99853 4678999999999999999975
No 97
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.85 E-value=8.1e-09 Score=109.57 Aligned_cols=81 Identities=21% Similarity=0.321 Sum_probs=68.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCc-------------------------------------cEEEEEeCCHHHHHHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGI-------------------------------------GQVVALDNDKASVEACR 163 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga-------------------------------------~~V~anD~s~~Ave~i~ 163 (581)
.+.+|||+|||||.+.|++|....+. ..|+++|+|+.+++.++
T Consensus 195 ~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar 274 (385)
T 3ldu_A 195 AGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDIAR 274 (385)
T ss_dssp TTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHH
Confidence 35689999999999999998753221 36999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCC-CCC
Q 047386 164 RNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDP-YGS 205 (581)
Q Consensus 164 ~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDP-yGs 205 (581)
+|++.+|+. +.+++.++|+..+.. ...||+|+.|| ||.
T Consensus 275 ~Na~~~gl~--~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg~ 313 (385)
T 3ldu_A 275 ENAEIAGVD--EYIEFNVGDATQFKS--EDEFGFIITNPPYGE 313 (385)
T ss_dssp HHHHHHTCG--GGEEEEECCGGGCCC--SCBSCEEEECCCCCC
T ss_pred HHHHHcCCC--CceEEEECChhhcCc--CCCCcEEEECCCCcC
Confidence 999999996 579999999988653 35899999998 774
No 98
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.85 E-value=8e-09 Score=110.01 Aligned_cols=81 Identities=19% Similarity=0.219 Sum_probs=68.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCc-------------------------------------cEEEEEeCCHHHHHHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGI-------------------------------------GQVVALDNDKASVEACR 163 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga-------------------------------------~~V~anD~s~~Ave~i~ 163 (581)
.+..|||+|||||.+.|++|....+. ..|+++|+|+.+++.++
T Consensus 201 ~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar 280 (393)
T 3k0b_A 201 PDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAK 280 (393)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHH
T ss_pred CCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHHHH
Confidence 35689999999999999999753321 35999999999999999
Q ss_pred HHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCC-CCC
Q 047386 164 RNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDP-YGS 205 (581)
Q Consensus 164 ~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDP-yGs 205 (581)
+|++.+|+. +.+++.++|+..+.. ...||+|+.|| ||.
T Consensus 281 ~Na~~~gl~--~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg~ 319 (393)
T 3k0b_A 281 QNAVEAGLG--DLITFRQLQVADFQT--EDEYGVVVANPPYGE 319 (393)
T ss_dssp HHHHHTTCT--TCSEEEECCGGGCCC--CCCSCEEEECCCCCC
T ss_pred HHHHHcCCC--CceEEEECChHhCCC--CCCCCEEEECCCCcc
Confidence 999999996 578999999987653 35899999998 775
No 99
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.85 E-value=1.1e-08 Score=99.35 Aligned_cols=101 Identities=20% Similarity=0.090 Sum_probs=82.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH--hhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM--LTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l--~~~~~~fDvId 199 (581)
+.+|||+.||+|.+++.++....+..+|+++|+|+.+++.+.+|++.| .+++++++|+.... ......||+|+
T Consensus 78 ~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 78 GAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred CCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCCcEEEEE
Confidence 569999999999999999987533468999999999999999999987 25889999997642 22246899999
Q ss_pred eCCCCCC--hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSP--SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~--~~fld~A~~~l~~gGlL~vTa 227 (581)
+|+.... ..++..+.+.|++||+|++++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 153 ADVAQPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCCCccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 9987332 345777899999999999964
No 100
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.85 E-value=4.4e-09 Score=104.61 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=82.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.+++. |+ +|+++|+|+.+++.+++|+..|++. +++.++|+...+. ...||+|+.
T Consensus 120 ~~~~VLDiGcG~G~l~~~la~~--g~-~v~gvDi~~~~v~~a~~n~~~~~~~----v~~~~~d~~~~~~--~~~fD~Vv~ 190 (254)
T 2nxc_A 120 PGDKVLDLGTGSGVLAIAAEKL--GG-KALGVDIDPMVLPQAEANAKRNGVR----PRFLEGSLEAALP--FGPFDLLVA 190 (254)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TC-EEEEEESCGGGHHHHHHHHHHTTCC----CEEEESCHHHHGG--GCCEEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHh--CC-eEEEEECCHHHHHHHHHHHHHcCCc----EEEEECChhhcCc--CCCCCEEEE
Confidence 4679999999999999998884 77 9999999999999999999999973 7889999988653 357999999
Q ss_pred CCCCC-ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGS-PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs-~~~fld~A~~~l~~gGlL~vTa 227 (581)
++... ...++..+.+.|++||.|+++.
T Consensus 191 n~~~~~~~~~l~~~~~~LkpgG~lils~ 218 (254)
T 2nxc_A 191 NLYAELHAALAPRYREALVPGGRALLTG 218 (254)
T ss_dssp ECCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 87422 2357777889999999999863
No 101
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.84 E-value=5.3e-09 Score=98.92 Aligned_cols=101 Identities=13% Similarity=0.083 Sum_probs=86.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++...++ .+|+++|+|+.+++.+++|+..+++. +++++++|+..+.. ...||+|+.
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~--~~~~D~i~~ 138 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPE-AHFTLLDSLGKRVRFLRQVQHELKLE---NIEPVQSRVEEFPS--EPPFDGVIS 138 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCS---SEEEEECCTTTSCC--CSCEEEEEC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHcCCC---CeEEEecchhhCCc--cCCcCEEEE
Confidence 3569999999999999999986544 58999999999999999999999985 48999999977652 357999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
..+.....++..+.+.|++||+|++..
T Consensus 139 ~~~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 139 RAFASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp SCSSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred eccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 887666678888889999999999973
No 102
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.84 E-value=2.8e-09 Score=110.50 Aligned_cols=103 Identities=15% Similarity=0.134 Sum_probs=84.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCc----cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGI----GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga----~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDv 197 (581)
+.+|||+.||||.+.+.++..++.. ..|+++|+|+.++++++.|+..+++. +.+.++|+.... ....||+
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~----~~i~~~D~l~~~--~~~~fD~ 204 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQK----MTLLHQDGLANL--LVDPVDV 204 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCC----CEEEESCTTSCC--CCCCEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCC----ceEEECCCCCcc--ccCCccE
Confidence 4689999999999999999875432 67999999999999999999999873 578999986533 2367999
Q ss_pred EeeCC-CCCC---------------------hHhHHHHHHhccCCCeEEEEeccc
Q 047386 198 VDLDP-YGSP---------------------SVFLDSAIQSVADGGMLMCTATDM 230 (581)
Q Consensus 198 IdLDP-yGs~---------------------~~fld~A~~~l~~gGlL~vTaTD~ 230 (581)
|+.+| ||.- ..|+..+++.|++||.+++..++.
T Consensus 205 Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~~ 259 (344)
T 2f8l_A 205 VISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPDA 259 (344)
T ss_dssp EEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEGG
T ss_pred EEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECch
Confidence 99998 4421 158899999999999999987654
No 103
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.83 E-value=1.8e-08 Score=101.11 Aligned_cols=137 Identities=9% Similarity=0.100 Sum_probs=102.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCC-ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEG-IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~G-a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
+.+|||+-||||.++|.+++. | +.+|+++|+|+.|++.+++|++.||+. +++++.++|+...+.. ...||+|++
T Consensus 22 g~~VlDIGtGsG~l~i~la~~--~~~~~V~avDi~~~al~~A~~N~~~~gl~--~~I~v~~gD~l~~~~~-~~~~D~Ivi 96 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKN--QTASFAIAGEVVDGPFQSAQKQVRSSGLT--EQIDVRKGNGLAVIEK-KDAIDTIVI 96 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHT--TSEEEEEEEESSHHHHHHHHHHHHHTTCT--TTEEEEECSGGGGCCG-GGCCCEEEE
T ss_pred CCEEEEECCccHHHHHHHHHh--CCCCEEEEEECCHHHHHHHHHHHHHcCCC--ceEEEEecchhhccCc-cccccEEEE
Confidence 458999999999999999996 4 678999999999999999999999996 6899999998877642 235999887
Q ss_pred CCCCC--ChHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCCce
Q 047386 201 DPYGS--PSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYI 278 (581)
Q Consensus 201 DPyGs--~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r~i 278 (581)
-=-|. -..+|+.+...|+++|.|.+.. .. + ...+.+.....|..|
T Consensus 97 agmGg~lI~~IL~~~~~~L~~~~~lIlq~--------~~---------------------~----~~~lr~~L~~~Gf~i 143 (244)
T 3gnl_A 97 AGMGGTLIRTILEEGAAKLAGVTKLILQP--------NI---------------------A----AWQLREWSEQNNWLI 143 (244)
T ss_dssp EEECHHHHHHHHHHTGGGGTTCCEEEEEE--------SS---------------------C----HHHHHHHHHHHTEEE
T ss_pred eCCchHHHHHHHHHHHHHhCCCCEEEEEc--------CC---------------------C----hHHHHHHHHHCCCEE
Confidence 32222 2367788888888888887753 21 1 233445555667776
Q ss_pred EE-EeecccCceEEEEEEE
Q 047386 279 EP-VLSVQMDFYVRVFVRI 296 (581)
Q Consensus 279 ~P-lls~s~dhY~RvfVrV 296 (581)
.= .+-.-.++||.+++-.
T Consensus 144 ~~E~lv~e~~k~Yeii~~~ 162 (244)
T 3gnl_A 144 TSEAILREDNKVYEIMVLA 162 (244)
T ss_dssp EEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEECCEEEEEEEEE
Confidence 54 3555567888876543
No 104
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.83 E-value=1.1e-08 Score=104.83 Aligned_cols=104 Identities=16% Similarity=0.246 Sum_probs=84.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH-h-CCCCCCcEEEEehhHHHHHhh-CCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF-N-GSVACSKVESHLADARVYMLT-HPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~-N-~~~~~~~v~v~~~DA~~~l~~-~~~~fDvI 198 (581)
+.+|||+-||+|..++.+++. .+..+|+++|+|+.+++.+++|+.. + +.. ..+++++.+|+..++.. ....||+|
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~-~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLA-DPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGG-CTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccC-CCcEEEEECcHHHHHHhccCCceeEE
Confidence 468999999999999999975 4567999999999999999999853 1 222 25799999999998864 35689999
Q ss_pred eeCCCCC--C------hHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYGS--P------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyGs--~------~~fld~A~~~l~~gGlL~vTa 227 (581)
++|++.. + ..|+..+.++|++||+|++.+
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 9998421 1 478888999999999999975
No 105
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.83 E-value=3.8e-09 Score=106.69 Aligned_cols=92 Identities=18% Similarity=0.244 Sum_probs=69.3
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh-------C-CCCCCcEEEEehhHHHHHhhCCCc
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-------G-SVACSKVESHLADARVYMLTHPKE 194 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N-------~-~~~~~~v~v~~~DA~~~l~~~~~~ 194 (581)
.+|||++||+|..|+.+|+. |+ +|+++|+|+..++++++|++.. + +. .+++++++|+..+|......
T Consensus 90 ~~VLDl~~G~G~dal~lA~~--g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~--~~i~~~~~D~~~~L~~~~~~ 164 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV--GC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQ--ERLQLIHASSLTALTDITPR 164 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH--TC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHH--HHEEEEESCHHHHSTTCSSC
T ss_pred CEEEEcCCcCCHHHHHHHHc--CC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhh--cCEEEEECCHHHHHHhCccc
Confidence 58999999999999999985 66 5999999999988888887633 3 32 46999999999998754457
Q ss_pred ccEEeeCC-CCCC--hHhHHHHHHhccC
Q 047386 195 FDVVDLDP-YGSP--SVFLDSAIQSVAD 219 (581)
Q Consensus 195 fDvIdLDP-yGs~--~~fld~A~~~l~~ 219 (581)
||+|++|| |... +..+...++.++.
T Consensus 165 fDvV~lDP~y~~~~~saavkk~~~~lr~ 192 (258)
T 2oyr_A 165 PQVVYLDPMFPHKQKSALVKKEMRVFQS 192 (258)
T ss_dssp CSEEEECCCCCCCCC-----HHHHHHHH
T ss_pred CCEEEEcCCCCCcccchHHHHHHHHHHH
Confidence 99999999 5332 2334445555554
No 106
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.83 E-value=2.2e-09 Score=101.75 Aligned_cols=97 Identities=18% Similarity=0.237 Sum_probs=80.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.+++. |...|+++|+|+.+++.+++|+..+++. ++++.++|+..+. ...||+|+.+
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~---~~~fD~i~~~ 132 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIY---DIALQKTSLLADV---DGKFDLIVAN 132 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCC---CCEEEESSTTTTC---CSCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCC---ceEEEeccccccC---CCCceEEEEC
Confidence 458999999999999998873 6779999999999999999999999985 3899999987654 4689999999
Q ss_pred CCCC-ChHhHHHHHHhccCCCeEEEE
Q 047386 202 PYGS-PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 202 PyGs-~~~fld~A~~~l~~gGlL~vT 226 (581)
+... ...++..+.+.|++||.|+++
T Consensus 133 ~~~~~~~~~l~~~~~~L~~gG~l~~~ 158 (205)
T 3grz_A 133 ILAEILLDLIPQLDSHLNEDGQVIFS 158 (205)
T ss_dssp SCHHHHHHHGGGSGGGEEEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 7421 234556667889999999986
No 107
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.81 E-value=2.2e-09 Score=105.39 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=65.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH-HhhCC----Cccc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY-MLTHP----KEFD 196 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~-l~~~~----~~fD 196 (581)
+.+|||+.||||.+++.++...++ .+|+++|+|+.+++.+++|++.|++. ++++++++|+... +.... ..||
T Consensus 66 ~~~vLDlG~G~G~~~~~la~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 66 LRRGIDIGTGASCIYPLLGATLNG-WYFLATEVDDMCFNYAKKNVEQNNLS--DLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCEEEEESCTTTTHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCEEEEeCCChhHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHHHHHcCCC--ccEEEEEcchhhhhhhhhhcccCCccc
Confidence 568999999999999999886444 58999999999999999999999986 5799999998762 22111 4799
Q ss_pred EEeeCC
Q 047386 197 VVDLDP 202 (581)
Q Consensus 197 vIdLDP 202 (581)
+|+.+|
T Consensus 143 ~i~~np 148 (254)
T 2h00_A 143 FCMCNP 148 (254)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 999997
No 108
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.81 E-value=5.2e-08 Score=94.64 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=80.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh--hCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML--THPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~--~~~~~fDvId 199 (581)
+.+|||+.||+|..++.++... |...|+++|+|+.+++.+++|++.+ .+++++++|+..... .....||+|+
T Consensus 75 ~~~VLDlGcG~G~~~~~la~~~-~~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (230)
T 1fbn_A 75 DSKILYLGASAGTTPSHVADIA-DKGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp TCEEEEESCCSSHHHHHHHHHT-TTSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTTSCCEEEEE
T ss_pred CCEEEEEcccCCHHHHHHHHHc-CCcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCcccccccCccEEEEE
Confidence 5689999999999999999874 3578999999999999999998765 268899999876211 1125799999
Q ss_pred eCCCCC--ChHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGS--PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs--~~~fld~A~~~l~~gGlL~vT 226 (581)
.|+... ...++..+.+.|++||.|+++
T Consensus 149 ~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 149 EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 996421 156788889999999999996
No 109
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.80 E-value=1.5e-08 Score=98.80 Aligned_cols=101 Identities=26% Similarity=0.256 Sum_probs=85.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh-CCCCCCcEEEEehhHHHH-HhhCCCcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-GSVACSKVESHLADARVY-MLTHPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N-~~~~~~~v~v~~~DA~~~-l~~~~~~fDvI 198 (581)
.+.+|||+.||+|.+++.++..+....+|+++|+|+.+++.+++|++.+ +. .++++.++|+... +. ...||+|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~---~~v~~~~~d~~~~~~~--~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQV---ENVRFHLGKLEEAELE--EAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCC---CCEEEEESCGGGCCCC--TTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCC---CCEEEEECchhhcCCC--CCCcCEE
Confidence 4669999999999999999986422468999999999999999999998 84 4789999999776 32 3579999
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
++|+. .+..++..+.++|++||.|++..
T Consensus 171 ~~~~~-~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 171 ALDLM-EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp EEESS-CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EECCc-CHHHHHHHHHHhCCCCCEEEEEe
Confidence 99985 34588999999999999999875
No 110
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.79 E-value=6.7e-09 Score=109.39 Aligned_cols=101 Identities=19% Similarity=0.169 Sum_probs=84.3
Q ss_pred CCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
..+.+|||+.||||..++.+++. |+.+|+++|+| .+++.+++|++.|++. ++++++++|+..+.. ..+||+|+
T Consensus 62 ~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~--~~~~D~Iv 134 (376)
T 3r0q_C 62 FEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLD--HIVEVIEGSVEDISL--PEKVDVII 134 (376)
T ss_dssp TTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCT--TTEEEEESCGGGCCC--SSCEEEEE
T ss_pred CCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCC--CeEEEEECchhhcCc--CCcceEEE
Confidence 34679999999999999999984 88899999999 9999999999999996 679999999977643 36899999
Q ss_pred eCCC--CC-----ChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPY--GS-----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPy--Gs-----~~~fld~A~~~l~~gGlL~vTa 227 (581)
.++. .. ...++....+.|++||+|++..
T Consensus 135 ~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 135 SEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp ECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 9983 21 2235666668999999998754
No 111
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.78 E-value=1.7e-08 Score=99.21 Aligned_cols=100 Identities=19% Similarity=0.128 Sum_probs=83.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvId 199 (581)
.|.+|||+-||+|..+..+++. +..+|+++|+|+..++.++++.+..+. +++++.+|+..++... ...||.|+
T Consensus 60 ~G~rVLdiG~G~G~~~~~~~~~--~~~~v~~id~~~~~~~~a~~~~~~~~~----~~~~~~~~a~~~~~~~~~~~FD~i~ 133 (236)
T 3orh_A 60 KGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQTH----KVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TCEEEEEECCTTSHHHHHHTTS--CEEEEEEEECCHHHHHHHHHHGGGCSS----EEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCeEEEECCCccHHHHHHHHh--CCcEEEEEeCCHHHHHHHHHHHhhCCC----ceEEEeehHHhhcccccccCCceEE
Confidence 4679999999999999998874 457899999999999999999987764 5789999999887553 46799999
Q ss_pred eCCCCCC---------hHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSP---------SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~---------~~fld~A~~~l~~gGlL~vT 226 (581)
.|++.+. ..++..+.+.|++||+|.+.
T Consensus 134 ~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 9997442 24667788999999999764
No 112
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.77 E-value=3.5e-08 Score=94.28 Aligned_cols=169 Identities=9% Similarity=-0.028 Sum_probs=106.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC--CCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA--CSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~--~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+-||+|.+++.++... +...|+++|+|+.+++.+++|+..+++.. ..++++.++|+...- .....||+|+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~ 107 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQD-KRFHGYDAAT 107 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCC-GGGCSCSEEE
T ss_pred CCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccc-ccCCCcCEEe
Confidence 5699999999999999999852 34689999999999999999999888741 016899999974222 1235799998
Q ss_pred eCC-C--CC-C--hHhHHHHHHhccCCCeEEEEecc-chhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHH
Q 047386 200 LDP-Y--GS-P--SVFLDSAIQSVADGGMLMCTATD-MAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHAN 272 (581)
Q Consensus 200 LDP-y--Gs-~--~~fld~A~~~l~~gGlL~vTaTD-~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa 272 (581)
+.- + -. + ..++..+.+.|++||+|+++-.. ........+.. ......+..+.....+...+.+.+.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAG-------KLRHKDHRFEWTRSQFQNWANKITE 180 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC------------------CCSCBCHHHHHHHHHHHHH
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccc-------cccccccccccCHHHHHHHHHHHHH
Confidence 654 1 11 2 36778888899999988776421 11111001000 0011222334455666777778888
Q ss_pred HcCCceEEE--e--ecccCceEEEEEEEEcC
Q 047386 273 RYKRYIEPV--L--SVQMDFYVRVFVRIYTS 299 (581)
Q Consensus 273 ~~~r~i~Pl--l--s~s~dhY~RvfVrV~~~ 299 (581)
++|..++-. . .-..++..-+.+-+++|
T Consensus 181 ~~Gf~v~~~~~g~~~~~~g~~~q~~~~~~~~ 211 (217)
T 3jwh_A 181 RFAYNVQFQPIGEADPEVGSPTQMAVFIHRG 211 (217)
T ss_dssp HSSEEEEECCCSCCCSSSCCSEEEEEEEECC
T ss_pred HcCceEEEEecCCccCCCCchheeEeeeecc
Confidence 888766532 1 11233555555555554
No 113
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.77 E-value=1.4e-08 Score=108.93 Aligned_cols=76 Identities=17% Similarity=0.246 Sum_probs=66.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh--CCCCCCcEEEEehhHHHHHhhC-CCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN--GSVACSKVESHLADARVYMLTH-PKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N--~~~~~~~v~v~~~DA~~~l~~~-~~~fDvI 198 (581)
+.+|||++||+|..++.++.. | .+|+++|+|+.+++.+++|++.+ |+ ++++++++|+..++... ...||+|
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl---~~i~~i~~Da~~~L~~~~~~~fDvV 167 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--A-SQGIYIERNDETAVAARHNIPLLLNEG---KDVNILTGDFKEYLPLIKTFHPDYI 167 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--C-SEEEEEESCHHHHHHHHHHHHHHSCTT---CEEEEEESCGGGSHHHHHHHCCSEE
T ss_pred CCEEEEeCCCchHHHHHHHhc--C-CEEEEEECCHHHHHHHHHhHHHhccCC---CcEEEEECcHHHhhhhccCCCceEE
Confidence 679999999999999998873 4 68999999999999999999999 87 37999999999876531 2479999
Q ss_pred eeCCC
Q 047386 199 DLDPY 203 (581)
Q Consensus 199 dLDPy 203 (581)
++||+
T Consensus 168 ~lDPP 172 (410)
T 3ll7_A 168 YVDPA 172 (410)
T ss_dssp EECCE
T ss_pred EECCC
Confidence 99993
No 114
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.75 E-value=2.6e-08 Score=98.88 Aligned_cols=103 Identities=29% Similarity=0.324 Sum_probs=86.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh-C-CCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-G-SVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N-~-~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
.+.+|||+.||+|.+++.++..+....+|+++|+|+.+++.+++|++.+ + +. .++++.++|+..... ....||+|
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~--~~v~~~~~d~~~~~~-~~~~~D~v 175 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPP--DNWRLVVSDLADSEL-PDGSVDRA 175 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCC--TTEEEECSCGGGCCC-CTTCEEEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCC--CcEEEEECchHhcCC-CCCceeEE
Confidence 4669999999999999999986433468999999999999999999988 5 33 478999999977532 13579999
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
++|+. .+..++..+.++|++||.|++.+
T Consensus 176 ~~~~~-~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 176 VLDML-APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp EEESS-CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EECCc-CHHHHHHHHHHhCCCCCEEEEEe
Confidence 99975 35688999999999999999975
No 115
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.72 E-value=5.3e-08 Score=98.19 Aligned_cols=105 Identities=23% Similarity=0.156 Sum_probs=74.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeC-CHHHHHHHHHHHH-----HhCCCC--CCcEEEEe---hh-HHHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDN-DKASVEACRRNIK-----FNGSVA--CSKVESHL---AD-ARVYM 188 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~-s~~Ave~i~~Ni~-----~N~~~~--~~~v~v~~---~D-A~~~l 188 (581)
.+.+|||+.||||..++.+++. |+.+|+++|+ |+.+++.+++|++ .|++.. .+++++.. +| ...+.
T Consensus 79 ~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 79 AGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 4679999999999999998884 7779999999 8999999999994 444320 02567763 33 22332
Q ss_pred hh-CCCcccEEee-CC-CCC--ChHhHHHHHHhcc---C--CCeEEEEe
Q 047386 189 LT-HPKEFDVVDL-DP-YGS--PSVFLDSAIQSVA---D--GGMLMCTA 227 (581)
Q Consensus 189 ~~-~~~~fDvIdL-DP-yGs--~~~fld~A~~~l~---~--gGlL~vTa 227 (581)
.. ....||+|++ |. |.. ...++....++|+ + ||.+++.+
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEE
T ss_pred hhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEE
Confidence 11 2468999987 97 432 2467777788899 9 99887754
No 116
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.71 E-value=3.9e-08 Score=92.93 Aligned_cols=90 Identities=24% Similarity=0.319 Sum_probs=72.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.++.. |..+|+++|+|+.+++.+++|+. +++++++|+..+ ...||+|++
T Consensus 51 ~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~d~~~~----~~~~D~v~~ 116 (200)
T 1ne2_A 51 GGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG--------GVNFMVADVSEI----SGKYDTWIM 116 (200)
T ss_dssp BTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT--------TSEEEECCGGGC----CCCEEEEEE
T ss_pred CCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC--------CCEEEECcHHHC----CCCeeEEEE
Confidence 4669999999999999999884 77889999999999999999987 247899998763 258999999
Q ss_pred CCC-CC-----ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPY-GS-----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPy-Gs-----~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+ .. ...++..+++.+ |.+++.+
T Consensus 117 ~~p~~~~~~~~~~~~l~~~~~~~---g~~~~~~ 146 (200)
T 1ne2_A 117 NPPFGSVVKHSDRAFIDKAFETS---MWIYSIG 146 (200)
T ss_dssp CCCC-------CHHHHHHHHHHE---EEEEEEE
T ss_pred CCCchhccCchhHHHHHHHHHhc---CcEEEEE
Confidence 984 22 346888888877 4455543
No 117
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.71 E-value=5.9e-08 Score=92.31 Aligned_cols=102 Identities=18% Similarity=0.173 Sum_probs=83.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.......+|+++|+|+.+++.+++++..+++. ++++.++|+..+-. ....||+|++.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~~~~d~~~~~~-~~~~fD~v~~~ 113 (219)
T 3dh0_A 38 GMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK---NVEVLKSEENKIPL-PDNTVDFIFMA 113 (219)
T ss_dssp TCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT---TEEEEECBTTBCSS-CSSCEEEEEEE
T ss_pred CCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC---cEEEEecccccCCC-CCCCeeEEEee
Confidence 569999999999999999986422358999999999999999999999974 68999999865432 23579999875
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.++|++||.|+++.
T Consensus 114 ~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~ 143 (219)
T 3dh0_A 114 FTFHELSEPLKFLEELKRVAKPFAYLAIID 143 (219)
T ss_dssp SCGGGCSSHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhhcCCHHHHHHHHHHHhCCCeEEEEEE
Confidence 4 1 224578888999999999999974
No 118
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.71 E-value=3.1e-08 Score=103.25 Aligned_cols=100 Identities=17% Similarity=0.170 Sum_probs=82.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.+++. |+.+|+++|+|+ +++.+++|++.|++. ++++++++|+..+-. ...+||+|+.
T Consensus 66 ~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s~-~l~~a~~~~~~~~~~--~~v~~~~~d~~~~~~-~~~~fD~Iis 139 (349)
T 3q7e_A 66 KDKVVLDVGSGTGILCMFAAKA--GARKVIGIECSS-ISDYAVKIVKANKLD--HVVTIIKGKVEEVEL-PVEKVDIIIS 139 (349)
T ss_dssp TTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCT--TTEEEEESCTTTCCC-SSSCEEEEEE
T ss_pred CCCEEEEEeccchHHHHHHHHC--CCCEEEEECcHH-HHHHHHHHHHHcCCC--CcEEEEECcHHHccC-CCCceEEEEE
Confidence 3669999999999999999985 788999999995 999999999999986 679999999987622 1368999999
Q ss_pred CCCCC-------ChHhHHHHHHhccCCCeEEEE
Q 047386 201 DPYGS-------PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 201 DPyGs-------~~~fld~A~~~l~~gGlL~vT 226 (581)
++.+. ...++..+.+.|++||+|+..
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 87321 234666667999999998754
No 119
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.70 E-value=4.9e-08 Score=93.18 Aligned_cols=149 Identities=9% Similarity=0.060 Sum_probs=96.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC--CCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA--CSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~--~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+-||+|..++.++... +..+|+++|+|+.+++.+++|+..+++.. ..+++++++|+..+- .....||+|+
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~V~ 107 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRD-KRFSGYDAAT 107 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCC-GGGTTCSEEE
T ss_pred CCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccc-cccCCCCEEE
Confidence 5689999999999999999852 23689999999999999999999887641 016899999983222 1235799998
Q ss_pred eCC-C--CC-C--hHhHHHHHHhccCCCeEEEEecc-chhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHH
Q 047386 200 LDP-Y--GS-P--SVFLDSAIQSVADGGMLMCTATD-MAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHAN 272 (581)
Q Consensus 200 LDP-y--Gs-~--~~fld~A~~~l~~gGlL~vTaTD-~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa 272 (581)
+.- + -. + ..++..+.+.|++||+|+++... .....+..+...++ ...+..+.....+...+.+.+.
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~l~~ 180 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLR-------HRDHRFEWTRKEFQTWAVKVAE 180 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----G-------GGCCTTSBCHHHHHHHHHHHHH
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCccccc-------ccCceeeecHHHHHHHHHHHHH
Confidence 543 1 11 1 36778888999999977766421 11111111100000 1122233455566666667777
Q ss_pred HcCCceE
Q 047386 273 RYKRYIE 279 (581)
Q Consensus 273 ~~~r~i~ 279 (581)
++|..++
T Consensus 181 ~~Gf~v~ 187 (219)
T 3jwg_A 181 KYGYSVR 187 (219)
T ss_dssp HHTEEEE
T ss_pred HCCcEEE
Confidence 7776544
No 120
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.70 E-value=4.8e-08 Score=94.97 Aligned_cols=99 Identities=18% Similarity=0.116 Sum_probs=81.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdL 200 (581)
+.+|||+-||||..++.++.. +..+|+++|+|+.+++.+++|++.++ .+++++++|+..++... ...||+|++
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT----HKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS----SEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC----CCeEEEecCHHHhhcccCCCceEEEEE
Confidence 568999999999999999763 56689999999999999999998776 36899999999885432 368999999
Q ss_pred CCCCCCh---------HhHHHHHHhccCCCeEEEE
Q 047386 201 DPYGSPS---------VFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 201 DPyGs~~---------~fld~A~~~l~~gGlL~vT 226 (581)
|.|+... .++..+.+.|++||.|.+.
T Consensus 135 d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 135 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred CCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEE
Confidence 8775311 2366778999999999875
No 121
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.70 E-value=4.1e-08 Score=95.64 Aligned_cols=101 Identities=14% Similarity=0.144 Sum_probs=83.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...+ .+|+++|+|+.+++.+++|+..+++. ++++++++|+..+-. ....||+|+..
T Consensus 47 ~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~~fD~v~~~ 121 (257)
T 3f4k_A 47 DAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCA--DRVKGITGSMDNLPF-QNEELDLIWSE 121 (257)
T ss_dssp TCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCSS-CTTCEEEEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCC--CceEEEECChhhCCC-CCCCEEEEEec
Confidence 55999999999999999999743 38999999999999999999999986 579999999954421 24689999865
Q ss_pred C-C--CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y--GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y--Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + -.+..++..+.+.|++||.|+++.
T Consensus 122 ~~l~~~~~~~~l~~~~~~L~pgG~l~~~~ 150 (257)
T 3f4k_A 122 GAIYNIGFERGMNEWSKYLKKGGFIAVSE 150 (257)
T ss_dssp SCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred ChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence 4 2 124578888899999999999975
No 122
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.69 E-value=3.3e-08 Score=93.82 Aligned_cols=100 Identities=19% Similarity=0.217 Sum_probs=82.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. ..+|+++|+|+.+++.+++|+..+++. ++++.++|+...+.. ...||+|++
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~~-~~~~D~i~~ 149 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH---NVSTRHGDGWQGWQA-RAPFDAIIV 149 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC---SEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC---ceEEEECCcccCCcc-CCCccEEEE
Confidence 4679999999999999999985 368999999999999999999999974 689999999876543 358999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEecc
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTATD 229 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTaTD 229 (581)
+..-. .+.+.+.+.|++||.|+++..+
T Consensus 150 ~~~~~--~~~~~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 150 TAAPP--EIPTALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp SSBCS--SCCTHHHHTEEEEEEEEEEECS
T ss_pred ccchh--hhhHHHHHhcccCcEEEEEEcC
Confidence 85211 1224577899999999998633
No 123
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.67 E-value=4.5e-08 Score=97.56 Aligned_cols=98 Identities=15% Similarity=0.232 Sum_probs=81.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. |+ +|+++|+|+.+++.+++|+..+++ +++++++|+..+.. ...||+|++
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~--g~-~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~--~~~fD~i~~ 190 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLL--GY-DVTSWDHNENSIAFLNETKEKENL----NISTALYDINAANI--QENYDFIVS 190 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHHHHTTC----CEEEEECCGGGCCC--CSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHC--CC-eEEEEECCHHHHHHHHHHHHHcCC----ceEEEEeccccccc--cCCccEEEE
Confidence 5679999999999999999985 66 899999999999999999999986 47999999877543 568999998
Q ss_pred CC-CC--C-C--hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YG--S-P--SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yG--s-~--~~fld~A~~~l~~gGlL~vTa 227 (581)
.. +. . + ..++..+.+.|++||+|++.+
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 191 TVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp CSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 76 21 1 2 267888889999999977754
No 124
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.67 E-value=4.2e-08 Score=96.79 Aligned_cols=101 Identities=17% Similarity=0.162 Sum_probs=84.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. +..+|+++|+|+.+++.+++|++.+++. +++++.++|+..+-. ....||+|+..
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~-~~~~fD~i~~~ 121 (267)
T 3kkz_A 47 KSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQ--NRVTGIVGSMDDLPF-RNEELDLIWSE 121 (267)
T ss_dssp TCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCCC-CTTCEEEEEES
T ss_pred CCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCC--cCcEEEEcChhhCCC-CCCCEEEEEEc
Confidence 569999999999999999986 4568999999999999999999999986 579999999965432 24689999876
Q ss_pred C-C--CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y--GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y--Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
. + -.+..++..+.++|++||.|+++.
T Consensus 122 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 150 (267)
T 3kkz_A 122 GAIYNIGFERGLNEWRKYLKKGGYLAVSE 150 (267)
T ss_dssp SCGGGTCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCceecCHHHHHHHHHHHcCCCCEEEEEE
Confidence 5 1 234578888889999999999975
No 125
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.67 E-value=1.4e-07 Score=94.02 Aligned_cols=101 Identities=17% Similarity=0.138 Sum_probs=81.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDvI 198 (581)
+|.+|||+-||+|.+..++|..+..-.+|+++|+++..++.+++|++.. .++..+.+|+...... ....+|+|
T Consensus 77 pG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~~vDvV 151 (233)
T 4df3_A 77 EGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVEGVDGL 151 (233)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCCCEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccceEEEE
Confidence 4679999999999999999987644578999999999999998887643 3678888888764322 23679999
Q ss_pred eeCCCCC--ChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGS--PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs--~~~fld~A~~~l~~gGlL~vT 226 (581)
++|.+-. +..++..+.+.|++||.|++.
T Consensus 152 f~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 152 YADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 9997533 346888889999999999885
No 126
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.66 E-value=3.9e-08 Score=101.11 Aligned_cols=106 Identities=25% Similarity=0.251 Sum_probs=82.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH-------hCCCC-CCcEEEEehhHHHHHhh-C
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF-------NGSVA-CSKVESHLADARVYMLT-H 191 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~-------N~~~~-~~~v~v~~~DA~~~l~~-~ 191 (581)
.+.+|||+.||+|..++.++..+....+|+++|+|+.+++.+++|+.. |++.. ..++++.++|+..++.. .
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~ 184 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIK 184 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC----
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccC
Confidence 467999999999999999998642227899999999999999999985 54420 14789999999775422 1
Q ss_pred CCcccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 192 PKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 192 ~~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
...||+|++|+.. +..++..+.+.|++||.|++..
T Consensus 185 ~~~fD~V~~~~~~-~~~~l~~~~~~LkpgG~lv~~~ 219 (336)
T 2b25_A 185 SLTFDAVALDMLN-PHVTLPVFYPHLKHGGVCAVYV 219 (336)
T ss_dssp ---EEEEEECSSS-TTTTHHHHGGGEEEEEEEEEEE
T ss_pred CCCeeEEEECCCC-HHHHHHHHHHhcCCCcEEEEEe
Confidence 3469999999853 4468899999999999999765
No 127
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.65 E-value=1e-07 Score=96.08 Aligned_cols=99 Identities=11% Similarity=0.076 Sum_probs=83.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++... | .+|+++|+|+.+++.+++++..+++. +++++.++|+..+ ...||+|+.
T Consensus 72 ~~~~vLDiGcG~G~~~~~la~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~----~~~fD~v~~ 143 (302)
T 3hem_A 72 PGMTLLDIGCGWGSTMRHAVAEY-D-VNVIGLTLSENQYAHDKAMFDEVDSP--RRKEVRIQGWEEF----DEPVDRIVS 143 (302)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-C-CEEEEEECCHHHHHHHHHHHHHSCCS--SCEEEEECCGGGC----CCCCSEEEE
T ss_pred CcCEEEEeeccCcHHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECCHHHc----CCCccEEEE
Confidence 35699999999999999999864 4 57999999999999999999999986 6899999999766 468999976
Q ss_pred CC-C---CCC---------hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y---GSP---------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y---Gs~---------~~fld~A~~~l~~gGlL~vTa 227 (581)
.. + ..+ ..++..+.++|++||.|++..
T Consensus 144 ~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 183 (302)
T 3hem_A 144 LGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 183 (302)
T ss_dssp ESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEE
T ss_pred cchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEE
Confidence 53 1 111 467888889999999999874
No 128
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.65 E-value=5.4e-08 Score=100.47 Aligned_cols=99 Identities=17% Similarity=0.243 Sum_probs=81.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.+++. |+.+|+++|+| .+++.+++|++.|++. ++++++++|+..+-. ..++||+|+.+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~--~~i~~~~~d~~~~~~-~~~~~D~Ivs~ 112 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFS--DKITLLRGKLEDVHL-PFPKVDIIISE 112 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCT--TTEEEEESCTTTSCC-SSSCEEEEEEC
T ss_pred CCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCC--CCEEEEECchhhccC-CCCcccEEEEe
Confidence 568999999999999999984 78899999999 5899999999999986 689999999876532 12689999999
Q ss_pred CCCC-------ChHhHHHHHHhccCCCeEEEE
Q 047386 202 PYGS-------PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 202 PyGs-------~~~fld~A~~~l~~gGlL~vT 226 (581)
+.+. ...++....+.|++||+|+..
T Consensus 113 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 113 WMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred CchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 7422 234566667899999999743
No 129
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.64 E-value=5.1e-08 Score=101.30 Aligned_cols=99 Identities=17% Similarity=0.147 Sum_probs=80.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
++.+|||+.||+|.+++.+++. |+.+|+++|+|+ +++.+++|++.|++. ++++++++|+..+-. ...+||+|+.
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~--~~i~~~~~d~~~~~~-~~~~~D~Ivs 137 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLE--DTITLIKGKIEEVHL-PVEKVDVIIS 137 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCT--TTEEEEESCTTTSCC-SCSCEEEEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCC--CcEEEEEeeHHHhcC-CCCcEEEEEE
Confidence 3569999999999999999984 788999999997 899999999999985 589999999876521 1368999999
Q ss_pred CCC--CC-----ChHhHHHHHHhccCCCeEEE
Q 047386 201 DPY--GS-----PSVFLDSAIQSVADGGMLMC 225 (581)
Q Consensus 201 DPy--Gs-----~~~fld~A~~~l~~gGlL~v 225 (581)
++. .. ...++..+.+.|++||+|+.
T Consensus 138 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 138 EWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp CCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred cCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 872 21 12466667789999999873
No 130
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.64 E-value=6.3e-08 Score=93.04 Aligned_cols=104 Identities=21% Similarity=0.354 Sum_probs=81.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCC--CCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSV--ACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~--~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
.+.+|||+.||+|..++.++.....-.+|+++|+|+.+++.+++|+..+++. ...++++.++|+...... ...||+|
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~i 155 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE-EAPYDAI 155 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG-GCCEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc-CCCcCEE
Confidence 4569999999999999999876422248999999999999999999988740 014689999998754322 3579999
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+++... ..+++.+.+.|++||.|+++.
T Consensus 156 ~~~~~~--~~~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 156 HVGAAA--PVVPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp EECSBB--SSCCHHHHHTEEEEEEEEEEE
T ss_pred EECCch--HHHHHHHHHhcCCCcEEEEEE
Confidence 999742 245678889999999999874
No 131
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.64 E-value=3.9e-08 Score=102.31 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=81.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.+++. |+.+|+++|+|+ .++.+++|++.|++. ++++++++|+..+- ...+||+|+.
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~--~~v~~~~~d~~~~~--~~~~~D~Ivs 122 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLT--DRIVVIPGKVEEVS--LPEQVDIIIS 122 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCT--TTEEEEESCTTTCC--CSSCEEEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCC--CcEEEEEcchhhCC--CCCceeEEEE
Confidence 4679999999999999999984 788999999997 669999999999986 58999999987652 2357999999
Q ss_pred CCCCC----C--hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGS----P--SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs----~--~~fld~A~~~l~~gGlL~vTa 227 (581)
++.+. . ..++..+.+.|++||+|+++.
T Consensus 123 ~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 123 EPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp CCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCE
T ss_pred eCchhcCChHHHHHHHHHHHhhcCCCeEEEEec
Confidence 97432 1 245556678999999998764
No 132
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.62 E-value=8.9e-08 Score=95.38 Aligned_cols=101 Identities=19% Similarity=0.249 Sum_probs=84.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. |+ +|+++|+|+.+++.+++++..+++. .+++++++|+..+.......||+|++.
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~--~~-~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~v~~~ 143 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER--GH-QVILCDLSAQMIDRAKQAAEAKGVS--DNMQFIHCAAQDVASHLETPVDLILFH 143 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHHHC-CCG--GGEEEEESCGGGTGGGCSSCEEEEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHC--CC-EEEEEECCHHHHHHHHHHHHhcCCC--cceEEEEcCHHHhhhhcCCCceEEEEC
Confidence 568999999999999999985 54 7999999999999999999999885 589999999988763335689999876
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.++|++||+|+++.
T Consensus 144 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 173 (285)
T 4htf_A 144 AVLEWVADPRSVLQTLWSVLRPGGVLSLMF 173 (285)
T ss_dssp SCGGGCSCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhcccCHHHHHHHHHHHcCCCeEEEEEE
Confidence 4 1 234578888999999999999975
No 133
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.61 E-value=7.3e-08 Score=92.66 Aligned_cols=104 Identities=17% Similarity=0.155 Sum_probs=82.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcC----CccEEEEEeCCHHHHHHHHHHHHHhCCC--CCCcEEEEehhHHHHH----hh
Q 047386 121 KPPRVLEALSASGLRALRYAREVE----GIGQVVALDNDKASVEACRRNIKFNGSV--ACSKVESHLADARVYM----LT 190 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~----Ga~~V~anD~s~~Ave~i~~Ni~~N~~~--~~~~v~v~~~DA~~~l----~~ 190 (581)
.+.+|||+.||+|..++.++.... ...+|+++|+|+.+++.+++|+..+++. ...++++.++|+.... ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 356999999999999999988632 1248999999999999999999998830 0147899999997743 22
Q ss_pred CCCcccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 191 HPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 191 ~~~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
...||+|+++.... .+++.+.+.|++||.|+++.
T Consensus 160 -~~~fD~I~~~~~~~--~~~~~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 160 -LGLFDAIHVGASAS--ELPEILVDLLAENGKLIIPI 193 (227)
T ss_dssp -HCCEEEEEECSBBS--SCCHHHHHHEEEEEEEEEEE
T ss_pred -CCCcCEEEECCchH--HHHHHHHHhcCCCcEEEEEE
Confidence 35799999997422 35677889999999999985
No 134
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.61 E-value=9.5e-08 Score=88.95 Aligned_cols=99 Identities=17% Similarity=0.244 Sum_probs=80.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. |. +|+++|+|+.+++.+++|+..+++. ++++.++|+..+.. ...||+|+.
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~~~~d~~~~~~--~~~~D~v~~ 103 (199)
T 2xvm_A 32 KPGKTLDLGCGNGRNSLYLAAN--GY-DVDAWDKNAMSIANVERIKSIENLD---NLHTRVVDLNNLTF--DRQYDFILS 103 (199)
T ss_dssp CSCEEEEETCTTSHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHHHHHTCT---TEEEEECCGGGCCC--CCCEEEEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHC--CC-eEEEEECCHHHHHHHHHHHHhCCCC---CcEEEEcchhhCCC--CCCceEEEE
Confidence 3569999999999999999884 54 8999999999999999999999874 58999999876533 468999987
Q ss_pred CC-CC-----CChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YG-----SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yG-----s~~~fld~A~~~l~~gGlL~vTa 227 (581)
.. +. ....++..+.+.|++||.|++..
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 64 21 22457888889999999987754
No 135
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.61 E-value=2.9e-08 Score=108.33 Aligned_cols=101 Identities=17% Similarity=0.188 Sum_probs=82.3
Q ss_pred CCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
..+.+|||+.||+|.+++.+++ .|+.+|+++|+|+ +++.+++|++.|++. ++++++++|+..+- ...+||+|+
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~--~~~~~V~gvD~s~-~l~~A~~~~~~~gl~--~~v~~~~~d~~~~~--~~~~fD~Iv 229 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQ--AGARKIYAVEAST-MAQHAEVLVKSNNLT--DRIVVIPGKVEEVS--LPEQVDIII 229 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHH--TTCSEEEEEECHH-HHHHHHHHHHHTTCT--TTEEEEESCTTTCC--CSSCEEEEE
T ss_pred cCCCEEEEecCcccHHHHHHHH--cCCCEEEEEEcHH-HHHHHHHHHHHcCCC--CcEEEEECchhhCc--cCCCeEEEE
Confidence 3567999999999999999887 3778999999999 889999999999986 68999999987642 235799999
Q ss_pred eCCCCC---C---hHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGS---P---SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs---~---~~fld~A~~~l~~gGlL~vTa 227 (581)
.+|.+. . ...+..+.+.|++||+|+++.
T Consensus 230 s~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 230 SEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp CCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred EeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 998532 1 234445568899999998765
No 136
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.60 E-value=8.2e-08 Score=93.50 Aligned_cols=101 Identities=22% Similarity=0.202 Sum_probs=84.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++... | ..|+++|+|+.+++.+++|++.+++. .++++.++|+..+.. ...||+|++
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~-~-~~v~gvD~s~~~l~~a~~~~~~~~~~--~~v~~~~~d~~~~~~--~~~fD~V~~ 109 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH-G-ITGTGIDMSSLFTAQAKRRAEELGVS--ERVHFIHNDAAGYVA--NEKCDVAAC 109 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT-C-CEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEESCCTTCCC--SSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEECChHhCCc--CCCCCEEEE
Confidence 35699999999999999999864 3 47999999999999999999999985 579999999977643 467999986
Q ss_pred CC----CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP----YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP----yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
-. +..+..++..+.++|++||.|+++.
T Consensus 110 ~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~ 140 (256)
T 1nkv_A 110 VGATWIAGGFAGAEELLAQSLKPGGIMLIGE 140 (256)
T ss_dssp ESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred CCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence 22 2235678888889999999999964
No 137
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.60 E-value=1.4e-07 Score=93.14 Aligned_cols=102 Identities=10% Similarity=0.081 Sum_probs=79.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH------hCCCCCCcEEEEehhHHHHHhh--CCC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF------NGSVACSKVESHLADARVYMLT--HPK 193 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~------N~~~~~~~v~v~~~DA~~~l~~--~~~ 193 (581)
+.+|||+-||+|.+.+.+|...++ ..|+++|+|+.+++.+++|++. +++ .++.++++|+..++.. ...
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~p~-~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~---~nv~~~~~d~~~~l~~~~~~~ 122 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLFPD-TLILGLEIRVKVSDYVQDRIRALRAAPAGGF---QNIACLRSNAMKHLPNFFYKG 122 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGSTT-SEEEEEESCHHHHHHHHHHHHHHHHSTTCCC---TTEEEEECCTTTCHHHHCCTT
T ss_pred CCeEEEEccCCcHHHHHHHHHCCC-CeEEEEECCHHHHHHHHHHHHHHHHHHhcCC---CeEEEEECcHHHhhhhhCCCc
Confidence 458999999999999999987544 5799999999999999999875 344 4799999999864431 245
Q ss_pred cccEEee---CCCCC---------ChHhHHHHHHhccCCCeEEEEe
Q 047386 194 EFDVVDL---DPYGS---------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 194 ~fDvIdL---DPyGs---------~~~fld~A~~~l~~gGlL~vTa 227 (581)
.||.|++ ||+-. ...++..+.+.|++||.|++++
T Consensus 123 ~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~t 168 (235)
T 3ckk_A 123 QLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTIT 168 (235)
T ss_dssp CEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred CeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEe
Confidence 7999876 56421 1368888999999999998864
No 138
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.59 E-value=6.5e-07 Score=83.25 Aligned_cols=88 Identities=22% Similarity=0.245 Sum_probs=70.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||||.+++.++.. + +|+++|+|+.+++. . .++++.++|+...+. ...||+|+.
T Consensus 23 ~~~~vLD~GcG~G~~~~~l~~~--~--~v~gvD~s~~~~~~---------~---~~~~~~~~d~~~~~~--~~~fD~i~~ 84 (170)
T 3q87_B 23 EMKIVLDLGTSTGVITEQLRKR--N--TVVSTDLNIRALES---------H---RGGNLVRADLLCSIN--QESVDVVVF 84 (170)
T ss_dssp CSCEEEEETCTTCHHHHHHTTT--S--EEEEEESCHHHHHT---------C---SSSCEEECSTTTTBC--GGGCSEEEE
T ss_pred CCCeEEEeccCccHHHHHHHhc--C--cEEEEECCHHHHhc---------c---cCCeEEECChhhhcc--cCCCCEEEE
Confidence 3569999999999999999984 5 89999999999987 1 346789999877443 268999999
Q ss_pred CC-CCC------------ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YGS------------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yGs------------~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| |.. ...++...++.+ +||.|++..
T Consensus 85 n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 85 NPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp CCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred CCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 98 431 235777788888 999999875
No 139
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.59 E-value=7.8e-07 Score=88.39 Aligned_cols=101 Identities=18% Similarity=0.076 Sum_probs=73.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh--hCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML--THPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~--~~~~~fDvId 199 (581)
+.+|||+.||||..+..+|..+..-.+|+++|+++..++.+.+.++.. .++.++++||..... .....||+|+
T Consensus 77 g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-----~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 77 GTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-----PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-----TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-----CCeEEEEcccccchhhhccccceEEEE
Confidence 669999999999999999876533458999999999986555555432 258899999975421 1235799999
Q ss_pred eCCCC-CChHhH-HHHHHhccCCCeEEEEe
Q 047386 200 LDPYG-SPSVFL-DSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyG-s~~~fl-d~A~~~l~~gGlL~vTa 227 (581)
+|-.. .....+ ..+-+.|++||.|+++.
T Consensus 152 ~d~a~~~~~~il~~~~~~~LkpGG~lvisi 181 (232)
T 3id6_C 152 VDIAQPDQTDIAIYNAKFFLKVNGDMLLVI 181 (232)
T ss_dssp ECCCCTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ecCCChhHHHHHHHHHHHhCCCCeEEEEEE
Confidence 99522 212233 34444899999999873
No 140
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.58 E-value=3.6e-07 Score=92.37 Aligned_cols=103 Identities=15% Similarity=0.083 Sum_probs=83.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.......+|+++|+|+.+++.+++|+..+++. ++++++++|+..+.. ...||+|++
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~--~~~fD~v~~ 193 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALA--GQITLHRQDAWKLDT--REGYDLLTS 193 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTG--GGEEEEECCGGGCCC--CSCEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECchhcCCc--cCCeEEEEE
Confidence 3568999999999999998622123458999999999999999999999886 579999999987543 268999998
Q ss_pred CC-C---CCCh---HhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y---GSPS---VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y---Gs~~---~fld~A~~~l~~gGlL~vTa 227 (581)
.. + ..+. .++..+.+.|++||.|+++.
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 66 2 1222 27888899999999999964
No 141
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.58 E-value=1.1e-07 Score=89.53 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=83.2
Q ss_pred eEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCC-
Q 047386 124 RVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDP- 202 (581)
Q Consensus 124 ~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDP- 202 (581)
+|||+.||+|..++.++.. ++ .+|+++|+|+.+++.+++|+..+++. .+++++++|+..+-. ....||+|++..
T Consensus 46 ~vLdiG~G~G~~~~~l~~~-~~-~~v~~~D~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~~~D~v~~~~~ 120 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ-SD-FSIRALDFSKHMNEIALKNIADANLN--DRIQIVQGDVHNIPI-EDNYADLIVSRGS 120 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH-SE-EEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECBTTBCSS-CTTCEEEEEEESC
T ss_pred EEEEECCCCCHHHHHHHHc-CC-CeEEEEECCHHHHHHHHHHHHhcccc--CceEEEEcCHHHCCC-CcccccEEEECch
Confidence 8999999999999999986 33 57999999999999999999999985 579999999866431 236899999875
Q ss_pred ---CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 203 ---YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 203 ---yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+..+..++..+.+.|++||.|+++.
T Consensus 121 l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 121 VFFWEDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HhhccCHHHHHHHHHHhCCCCCEEEEEe
Confidence 1234578888999999999999974
No 142
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.57 E-value=3e-07 Score=94.79 Aligned_cols=100 Identities=16% Similarity=0.101 Sum_probs=81.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|.++...+.+.+|+ +|+++|+|+.+++.+++|++..++ +++++.++|+..+- ...||+|++
T Consensus 122 ~g~rVLDIGcG~G~~ta~~lA~~~ga-~V~gIDis~~~l~~Ar~~~~~~gl---~~v~~v~gDa~~l~---d~~FDvV~~ 194 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGILLSHVYGM-RVNVVEIEPDIAELSRKVIEGLGV---DGVNVITGDETVID---GLEFDVLMV 194 (298)
T ss_dssp TTCEEEEECCCSSCHHHHHHHHTTCC-EEEEEESSHHHHHHHHHHHHHHTC---CSEEEEESCGGGGG---GCCCSEEEE
T ss_pred CcCEEEEECCCccHHHHHHHHHccCC-EEEEEECCHHHHHHHHHHHHhcCC---CCeEEEECchhhCC---CCCcCEEEE
Confidence 46799999999997764443333564 799999999999999999999987 37999999998753 357999998
Q ss_pred CCCC-CChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYG-SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyG-s~~~fld~A~~~l~~gGlL~vTa 227 (581)
+=.. ....+++...+.|++||.|.+..
T Consensus 195 ~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 195 AALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp CTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 7432 12468888999999999999865
No 143
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.57 E-value=6.8e-08 Score=106.83 Aligned_cols=110 Identities=14% Similarity=0.117 Sum_probs=85.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCC-----------------ccEEEEEeCCHHHHHHHHHHHHHhCCCCC--CcEEEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEG-----------------IGQVVALDNDKASVEACRRNIKFNGSVAC--SKVESHL 181 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~G-----------------a~~V~anD~s~~Ave~i~~Ni~~N~~~~~--~~v~v~~ 181 (581)
.+.+|||+.||||.+.+.++..++. ...++++|+|+.++++++.|+.++++... ..+.+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 4669999999999999998875421 13699999999999999999999998510 0267889
Q ss_pred hhHHHHHhhCCCcccEEeeCC-CCCC-----------------hHhHHHHHHhccCCCeEEEEeccc
Q 047386 182 ADARVYMLTHPKEFDVVDLDP-YGSP-----------------SVFLDSAIQSVADGGMLMCTATDM 230 (581)
Q Consensus 182 ~DA~~~l~~~~~~fDvIdLDP-yGs~-----------------~~fld~A~~~l~~gGlL~vTaTD~ 230 (581)
+|+.........+||+|+.+| |+.. ..|+..+++.|++||.+++-.++.
T Consensus 249 gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p~~ 315 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVPDN 315 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEHH
T ss_pred CCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEecCc
Confidence 998654322245799999998 5432 158999999999999988876543
No 144
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.56 E-value=1.5e-07 Score=96.39 Aligned_cols=101 Identities=22% Similarity=0.216 Sum_probs=81.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++...+...+|+++|+|+.+++.+++|++.+++. ++++.++|+...+.. ...||+|++
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~---~v~~~~~d~~~~~~~-~~~fD~Iv~ 150 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIE---NVIFVCGDGYYGVPE-FSPYDVIFV 150 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCC---SEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCC---CeEEEECChhhcccc-CCCeEEEEE
Confidence 4679999999999999999986321257999999999999999999999985 489999999875542 357999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
++.-. .+.+.+.+.|++||.|++.+
T Consensus 151 ~~~~~--~~~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 151 TVGVD--EVPETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CSBBS--CCCHHHHHHEEEEEEEEEEB
T ss_pred cCCHH--HHHHHHHHhcCCCcEEEEEE
Confidence 97321 12256678999999999985
No 145
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.56 E-value=6.2e-08 Score=96.13 Aligned_cols=102 Identities=23% Similarity=0.280 Sum_probs=82.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. |...|+++|+|+.+++.+++++..+++. .++.++++|+..+-......||+|++.
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRR--FKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCS--SEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCC--ccEEEEECCccccccCCCCCcCEEEEC
Confidence 568999999999999998874 6668999999999999999999988875 578999999876532124579999876
Q ss_pred C-C----CC---ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y----GS---PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y----Gs---~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + .. +..++..+.+.|++||.|+++.
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTV 174 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 2 11 2357777889999999999975
No 146
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.56 E-value=2.9e-08 Score=100.03 Aligned_cols=97 Identities=9% Similarity=0.006 Sum_probs=81.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH--hCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF--NGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~--N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+.+|+|..+.++++. + .+|+++|+|+..++.+++|+.. +++. ..+++++.+|+..++ ..||+|+
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~-~~rv~~~~~D~~~~~----~~fD~Ii 144 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKN-NKNFTHAKQLLDLDI----KKYDLIF 144 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHT-CTTEEEESSGGGSCC----CCEEEEE
T ss_pred CCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccC-CCeEEEEechHHHHH----hhCCEEE
Confidence 458999999999999999986 5 8999999999999999988743 2232 147999999998876 5799999
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|.. .|..|+..+.+.|++||+|++..
T Consensus 145 ~d~~-dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 145 CLQE-PDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp ESSC-CCHHHHHHHHTTEEEEEEEEEEE
T ss_pred ECCC-ChHHHHHHHHHhcCCCcEEEEEc
Confidence 9964 35678999999999999999863
No 147
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.55 E-value=2.1e-07 Score=91.95 Aligned_cols=106 Identities=23% Similarity=0.247 Sum_probs=87.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...++ .+|+++|+|+.+++.+++|+..+++. ++++.++|+..+.. ....||+|++.
T Consensus 38 ~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~---~~~~~~~d~~~~~~-~~~~fD~v~~~ 112 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILAKNNPD-AEITSIDISPESLEKARENTEKNGIK---NVKFLQANIFSLPF-EDSSFDHIFVC 112 (276)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHHHTTCC---SEEEEECCGGGCCS-CTTCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHHHHHcCCC---CcEEEEcccccCCC-CCCCeeEEEEe
Confidence 569999999999999999987444 58999999999999999999999984 68999999986542 24689999876
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEeccchh
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTATDMAV 232 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTaTD~a~ 232 (581)
- + ..+..++..+.++|++||+|.++..|...
T Consensus 113 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 147 (276)
T 3mgg_A 113 FVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGS 147 (276)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGG
T ss_pred chhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCC
Confidence 4 1 23457888889999999999998755533
No 148
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.55 E-value=2.5e-07 Score=92.06 Aligned_cols=98 Identities=13% Similarity=0.163 Sum_probs=81.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++... |+ +|+++|+|+..++.+++++...++. .++++.++|+..+ ...||+|+..
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~~-~~-~v~gvd~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~----~~~fD~v~~~ 136 (287)
T 1kpg_A 65 GMTLLDVGCGWGATMMRAVEKY-DV-NVVGLTLSKNQANHVQQLVANSENL--RSKRVLLAGWEQF----DEPVDRIVSI 136 (287)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-CC-EEEEEESCHHHHHHHHHHHHTCCCC--SCEEEEESCGGGC----CCCCSEEEEE
T ss_pred cCEEEEECCcccHHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHhcCCC--CCeEEEECChhhC----CCCeeEEEEe
Confidence 5699999999999999999654 55 8999999999999999999988875 5799999998543 2689999754
Q ss_pred C-C-----CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-----GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-----Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.++|++||.|+++.
T Consensus 137 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 168 (287)
T 1kpg_A 137 GAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 168 (287)
T ss_dssp SCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CchhhcChHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 1 224578888899999999999875
No 149
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.55 E-value=7.6e-08 Score=99.75 Aligned_cols=98 Identities=21% Similarity=0.330 Sum_probs=81.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.+++..++ .+|+++|+|+.+++.+++|+..|++. ++++.+|+..+. ...||+|+++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~~~-~~v~~vD~s~~~l~~a~~~~~~~~~~----~~~~~~d~~~~~---~~~fD~Iv~~ 268 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHSPK-IRLTLCDVSAPAVEASRATLAANGVE----GEVFASNVFSEV---KGRFDMIISN 268 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHCTT-CBCEEEESBHHHHHHHHHHHHHTTCC----CEEEECSTTTTC---CSCEEEEEEC
T ss_pred CCeEEEecCccCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhCCC----CEEEEccccccc---cCCeeEEEEC
Confidence 558999999999999999986332 37999999999999999999999975 467889986654 4589999999
Q ss_pred C-CCC--------ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-YGS--------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-yGs--------~~~fld~A~~~l~~gGlL~vTa 227 (581)
| |.. ...++..+.+.|++||.|++..
T Consensus 269 ~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 269 PPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 8 432 1357778889999999999975
No 150
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.54 E-value=2.1e-07 Score=105.93 Aligned_cols=110 Identities=17% Similarity=0.254 Sum_probs=81.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhc----CCc-------------------------------------cEEEEEeCCHHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREV----EGI-------------------------------------GQVVALDNDKASV 159 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~----~Ga-------------------------------------~~V~anD~s~~Av 159 (581)
.+..|||+|||||.+.|++|... ||. ..|++.|+|+.|+
T Consensus 190 ~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av 269 (703)
T 3v97_A 190 PGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVI 269 (703)
T ss_dssp TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHH
T ss_pred CCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHHH
Confidence 35689999999999999998753 121 3699999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCC-CcccEEeeCC-CCCC----h---Hh---HHHHHHhccCCCeEEEEe
Q 047386 160 EACRRNIKFNGSVACSKVESHLADARVYMLTHP-KEFDVVDLDP-YGSP----S---VF---LDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 160 e~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~-~~fDvIdLDP-yGs~----~---~f---ld~A~~~l~~gGlL~vTa 227 (581)
+.+++|++.+|+. +.+++.++|+..+..... ..||+|+.+| ||.. . .+ +...++.+.+||-+++-+
T Consensus 270 ~~A~~N~~~agv~--~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~ilt 347 (703)
T 3v97_A 270 QRARTNARLAGIG--ELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLFS 347 (703)
T ss_dssp HHHHHHHHHTTCG--GGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred HHHHHHHHHcCCC--CceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEEe
Confidence 9999999999996 579999999987542211 2799999998 7752 1 12 222345556798888865
Q ss_pred ccchh
Q 047386 228 TDMAV 232 (581)
Q Consensus 228 TD~a~ 232 (581)
.|...
T Consensus 348 ~~~~l 352 (703)
T 3v97_A 348 ASPDL 352 (703)
T ss_dssp SCHHH
T ss_pred CCHHH
Confidence 54443
No 151
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.54 E-value=1.2e-07 Score=90.19 Aligned_cols=99 Identities=21% Similarity=0.186 Sum_probs=79.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. +. +|+++|+|+.+++.+++|+..++. +++++++|+..+- .....||+|++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~-~~~~~~D~v~~~ 110 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY--GF-EVVGVDISEDMIRKAREYAKSRES----NVEFIVGDARKLS-FEDKTFDYVIFI 110 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHHHHTTC----CCEEEECCTTSCC-SCTTCEEEEEEE
T ss_pred CCeEEEEeccCCHHHHHHHHc--CC-EEEEEECCHHHHHHHHHHHHhcCC----CceEEECchhcCC-CCCCcEEEEEEc
Confidence 458999999999999988884 54 899999999999999999998872 5789999987632 123579998876
Q ss_pred CC---CC---ChHhHHHHHHhccCCCeEEEEec
Q 047386 202 PY---GS---PSVFLDSAIQSVADGGMLMCTAT 228 (581)
Q Consensus 202 Py---Gs---~~~fld~A~~~l~~gGlL~vTaT 228 (581)
+. .. +..++..+.++|++||.|++...
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 143 (227)
T 1ve3_A 111 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFT 143 (227)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CchHhCCHHHHHHHHHHHHHHcCCCcEEEEEec
Confidence 53 22 23577888899999999998753
No 152
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.53 E-value=1.5e-07 Score=91.56 Aligned_cols=99 Identities=21% Similarity=0.242 Sum_probs=79.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++...+ .+|+++|+|+.+++.+++|+..+++. ++++.++|+..-+.. ...||+|++
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~~-~~~fD~Ii~ 164 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVK---NVHVILGDGSKGFPP-KAPYDVIIV 164 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCC---SEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCC---CcEEEECCcccCCCC-CCCccEEEE
Confidence 466899999999999999998643 68999999999999999999999985 489999998322221 235999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+..-. .+.+.+.+.|++||.|+++.
T Consensus 165 ~~~~~--~~~~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 165 TAGAP--KIPEPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CSBBS--SCCHHHHHTEEEEEEEEEEE
T ss_pred CCcHH--HHHHHHHHhcCCCcEEEEEE
Confidence 86211 23456788999999999985
No 153
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.53 E-value=1.3e-07 Score=95.93 Aligned_cols=102 Identities=12% Similarity=0.062 Sum_probs=83.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|.+++.++... | .+|+++|+|+.+++.+++|+..+++. ++++++++|+..+-. ....||+|+.
T Consensus 117 ~~~~vLDiGcG~G~~~~~la~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~-~~~~fD~V~~ 191 (312)
T 3vc1_A 117 PDDTLVDAGCGRGGSMVMAHRRF-G-SRVEGVTLSAAQADFGNRRARELRID--DHVRSRVCNMLDTPF-DKGAVTASWN 191 (312)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-C-CEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCCC-CTTCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHHHHcCCC--CceEEEECChhcCCC-CCCCEeEEEE
Confidence 35699999999999999999853 4 47999999999999999999999986 589999999875421 2368999965
Q ss_pred CC---CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP---YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP---yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
-- +-.+..++..+.++|++||.|++..
T Consensus 192 ~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~ 221 (312)
T 3vc1_A 192 NESTMYVDLHDLFSEHSRFLKVGGRYVTIT 221 (312)
T ss_dssp ESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhCCHHHHHHHHHHHcCCCcEEEEEE
Confidence 32 1125678888999999999999864
No 154
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.52 E-value=1.6e-06 Score=83.80 Aligned_cols=99 Identities=18% Similarity=0.122 Sum_probs=75.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh--hCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML--THPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~--~~~~~fDvId 199 (581)
+.+|||+-||||..++.++...+ ..+|+++|+|+.+++.+.++++.. .++.++++|+..... .....||+|+
T Consensus 58 g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~~fD~V~ 131 (210)
T 1nt2_A 58 DERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIVEKVDLIY 131 (210)
T ss_dssp SCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTCCCEEEEE
T ss_pred CCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccccceeEEE
Confidence 56899999999999999988653 468999999999998887777643 257788899876411 1136799999
Q ss_pred eCCCCCC--hHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSP--SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~--~~fld~A~~~l~~gGlL~vT 226 (581)
+|-.... ..++..+.+.|++||.|++.
T Consensus 132 ~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 132 QDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 9942211 13477788999999999987
No 155
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.52 E-value=1.7e-07 Score=93.81 Aligned_cols=102 Identities=18% Similarity=0.284 Sum_probs=84.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...++..+|+++|+|+.+++.+++++..++. ++++.++|+..+.. ...||+|++.
T Consensus 23 ~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~----~v~~~~~d~~~~~~--~~~fD~v~~~ 96 (284)
T 3gu3_A 23 PVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY----DSEFLEGDATEIEL--NDKYDIAICH 96 (284)
T ss_dssp CCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS----EEEEEESCTTTCCC--SSCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC----ceEEEEcchhhcCc--CCCeeEEEEC
Confidence 56899999999999999998766556899999999999999999987654 68999999986433 3589999886
Q ss_pred CC----CCChHhHHHHHHhccCCCeEEEEecc
Q 047386 202 PY----GSPSVFLDSAIQSVADGGMLMCTATD 229 (581)
Q Consensus 202 Py----Gs~~~fld~A~~~l~~gGlL~vTaTD 229 (581)
-. ..+..++..+.+.|++||+|++...+
T Consensus 97 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 97 AFLLHMTTPETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp SCGGGCSSHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred ChhhcCCCHHHHHHHHHHHcCCCCEEEEEecc
Confidence 52 22457888899999999999987654
No 156
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.51 E-value=2.9e-07 Score=92.54 Aligned_cols=104 Identities=12% Similarity=0.158 Sum_probs=83.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh-CCCCCCcEEEEehhHHHHHhhC-----CCcc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-GSVACSKVESHLADARVYMLTH-----PKEF 195 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N-~~~~~~~v~v~~~DA~~~l~~~-----~~~f 195 (581)
+.+|||+-||+|..++.++...++..+|+++|+|+.+++.+++|++.+ +.. .+++++++|+..+-... ...|
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTY--KNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CC--TTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCC--CceEEEEcCHHhCCccccccccCCCe
Confidence 569999999999999999975424578999999999999999999987 433 57999999997654322 1589
Q ss_pred cEEeeCC---CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDP---YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDP---yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+|+..- +-.+..++..+.+.|++||.|++..
T Consensus 115 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (299)
T 3g5t_A 115 DMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG 149 (299)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence 9998753 1234578888999999999998843
No 157
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.50 E-value=3.7e-07 Score=92.43 Aligned_cols=99 Identities=12% Similarity=0.156 Sum_probs=82.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++... |+ +|+++|+|+.+++.+++++..+++. .++++.++|+..+ ...||+|+.
T Consensus 90 ~~~~vLDiGcG~G~~~~~la~~~-~~-~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~----~~~fD~v~~ 161 (318)
T 2fk8_A 90 PGMTLLDIGCGWGTTMRRAVERF-DV-NVIGLTLSKNQHARCEQVLASIDTN--RSRQVLLQGWEDF----AEPVDRIVS 161 (318)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CC-EEEEEESCHHHHHHHHHHHHTSCCS--SCEEEEESCGGGC----CCCCSEEEE
T ss_pred CcCEEEEEcccchHHHHHHHHHC-CC-EEEEEECCHHHHHHHHHHHHhcCCC--CceEEEECChHHC----CCCcCEEEE
Confidence 45699999999999999999864 55 8999999999999999999998885 5789999998554 367999986
Q ss_pred CC-C---C--CChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y---G--SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y---G--s~~~fld~A~~~l~~gGlL~vTa 227 (581)
.- + + .+..++..+.++|++||.|+++.
T Consensus 162 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 194 (318)
T 2fk8_A 162 IEAFEHFGHENYDDFFKRCFNIMPADGRMTVQS 194 (318)
T ss_dssp ESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 53 1 1 23468888889999999999875
No 158
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.48 E-value=4e-07 Score=88.63 Aligned_cols=100 Identities=16% Similarity=0.203 Sum_probs=82.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. + ..|+++|+|+.+++.+++++..+++. ++++.++|+..+- .....||+|+.
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~-~~~~~fD~v~~ 93 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPY--V-QECIGVDATKEMVEVASSFAQEKGVE---NVRFQQGTAESLP-FPDDSFDIITC 93 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--S-SEEEEEESCHHHHHHHHHHHHHHTCC---SEEEEECBTTBCC-SCTTCEEEEEE
T ss_pred CCCEEEEEccCcCHHHHHHHHh--C-CEEEEEECCHHHHHHHHHHHHHcCCC---CeEEEecccccCC-CCCCcEEEEEE
Confidence 3669999999999999999885 4 48999999999999999999999874 6899999986532 22367999987
Q ss_pred CC----CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP----YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP----yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.- +..+..++..+.+.|++||.|+++.
T Consensus 94 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 124 (239)
T 1xxl_A 94 RYAAHHFSDVRKAVREVARVLKQDGRFLLVD 124 (239)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 63 2234578888899999999999874
No 159
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.47 E-value=1.1e-07 Score=102.35 Aligned_cols=106 Identities=17% Similarity=0.158 Sum_probs=83.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcC------------CccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREVE------------GIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM 188 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~------------Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l 188 (581)
.+.+|||+.||||.+.+.++..+. ....++++|+|+.++++++.|+.++|+.. ..+.+.++|+....
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~-~~~~i~~gD~l~~~ 249 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGT-DRSPIVCEDSLEKE 249 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCS-SCCSEEECCTTTSC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCc-CCCCEeeCCCCCCc
Confidence 356899999999999999987541 12469999999999999999999999841 14678899986543
Q ss_pred hhCCCcccEEeeCC-CCCC--------------------hHhHHHHHHhccCCCeEEEEecc
Q 047386 189 LTHPKEFDVVDLDP-YGSP--------------------SVFLDSAIQSVADGGMLMCTATD 229 (581)
Q Consensus 189 ~~~~~~fDvIdLDP-yGs~--------------------~~fld~A~~~l~~gGlL~vTaTD 229 (581)
. ..+||+|+.+| |+.. ..|+..+++.|++||.+++-..+
T Consensus 250 ~--~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 250 P--STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp C--SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred c--cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEECC
Confidence 2 24899999998 5431 26899999999999998876543
No 160
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.46 E-value=3.9e-07 Score=86.63 Aligned_cols=101 Identities=22% Similarity=0.229 Sum_probs=80.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++.....-.+|+++|+|+.+++.+++|+..+++. ++++.++|+...+.. ...||+|++
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~---~v~~~~~d~~~~~~~-~~~fD~v~~ 152 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYD---NVIVIVGDGTLGYEP-LAPYDRIYT 152 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCT---TEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC---CeEEEECCcccCCCC-CCCeeEEEE
Confidence 4669999999999999999986411268999999999999999999999874 589999998543321 357999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+.... .+.+.+.+.|++||.|++..
T Consensus 153 ~~~~~--~~~~~~~~~L~pgG~lv~~~ 177 (215)
T 2yxe_A 153 TAAGP--KIPEPLIRQLKDGGKLLMPV 177 (215)
T ss_dssp SSBBS--SCCHHHHHTEEEEEEEEEEE
T ss_pred CCchH--HHHHHHHHHcCCCcEEEEEE
Confidence 86221 23367788999999999975
No 161
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.44 E-value=2.7e-07 Score=87.93 Aligned_cols=102 Identities=18% Similarity=0.285 Sum_probs=81.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC--CCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA--CSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~--~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|||+.||+|..++.++.. |+ +|+++|+|+.+++.+++|+..+++.. ..++++.++|+..+-. ....||+|+
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~D~v~ 106 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELASK--GY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSF-HDSSFDFAV 106 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCS-CTTCEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhC--CC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCC-CCCceeEEE
Confidence 569999999999999999985 55 79999999999999999999887631 1368899999875432 246899998
Q ss_pred eCC-C---CCCh---HhHHHHHHhccCCCeEEEEe
Q 047386 200 LDP-Y---GSPS---VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDP-y---Gs~~---~fld~A~~~l~~gGlL~vTa 227 (581)
+.. + ..+. .++..+.+.|++||.|+++.
T Consensus 107 ~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 141 (235)
T 3sm3_A 107 MQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVE 141 (235)
T ss_dssp EESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence 865 2 1223 67888889999999999874
No 162
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.44 E-value=3.6e-07 Score=92.31 Aligned_cols=107 Identities=20% Similarity=0.196 Sum_probs=78.6
Q ss_pred CCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC--------------------------
Q 047386 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA-------------------------- 173 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~-------------------------- 173 (581)
+.+.+|||+-||+|..++.++...+ ..+|+++|+|+.+++.+++|+..++...
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3567999999999999999998754 4589999999999999999988765320
Q ss_pred -----------------------------CCcEEEEehhHHH----HHhhCCCcccEEeeCCCC----------CChHhH
Q 047386 174 -----------------------------CSKVESHLADARV----YMLTHPKEFDVVDLDPYG----------SPSVFL 210 (581)
Q Consensus 174 -----------------------------~~~v~v~~~DA~~----~l~~~~~~fDvIdLDPyG----------s~~~fl 210 (581)
..++++.++|+.. ++......||+|+.---- ....++
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 0378999998753 222234689999875421 123567
Q ss_pred HHHHHhccCCCeEEEEe
Q 047386 211 DSAIQSVADGGMLMCTA 227 (581)
Q Consensus 211 d~A~~~l~~gGlL~vTa 227 (581)
..+.++|++||+|+++.
T Consensus 204 ~~~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHHHEEEEEEEEEEC
T ss_pred HHHHHHhCCCcEEEEec
Confidence 77889999999999975
No 163
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.44 E-value=2.3e-07 Score=90.15 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=80.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. +...|+++|+|+.+++.+++|+..++. .+++++++|+..+.. ....||+|+++
T Consensus 80 ~~~vLDiGcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~---~~~~~~~~d~~~~~~-~~~~fD~v~~~ 153 (241)
T 2ex4_A 80 TSCALDCGAGIGRITKRLLLP--LFREVDMVDITEDFLVQAKTYLGEEGK---RVRNYFCCGLQDFTP-EPDSYDVIWIQ 153 (241)
T ss_dssp CSEEEEETCTTTHHHHHTTTT--TCSEEEEEESCHHHHHHHHHHTGGGGG---GEEEEEECCGGGCCC-CSSCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHHhhhcCC---ceEEEEEcChhhcCC-CCCCEEEEEEc
Confidence 569999999999999998885 566899999999999999999987752 368899999765532 23479999887
Q ss_pred C-C-CCCh----HhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GSPS----VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs~~----~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+. .++..+.+.|++||.|+++.
T Consensus 154 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 185 (241)
T 2ex4_A 154 WVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKD 185 (241)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 3 1 1122 57788889999999999864
No 164
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.44 E-value=1.9e-07 Score=88.69 Aligned_cols=97 Identities=16% Similarity=0.178 Sum_probs=78.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. + ..|+++|+|+.+++.+++|+..+ .+++++++|+..+. ....||+|++.
T Consensus 52 ~~~vLDiGcG~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~--~~~~fD~v~~~ 121 (216)
T 3ofk_A 52 VSNGLEIGCAAGAFTEKLAPH--C-KRLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS--TAELFDLIVVA 121 (216)
T ss_dssp EEEEEEECCTTSHHHHHHGGG--E-EEEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC--CSCCEEEEEEE
T ss_pred CCcEEEEcCCCCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC--CCCCccEEEEc
Confidence 458999999999999999985 4 48999999999999999998753 25899999998766 24689999886
Q ss_pred C-C---CCC---hHhHHHHHHhccCCCeEEEEec
Q 047386 202 P-Y---GSP---SVFLDSAIQSVADGGMLMCTAT 228 (581)
Q Consensus 202 P-y---Gs~---~~fld~A~~~l~~gGlL~vTaT 228 (581)
. + ..+ ..++..+.+.|++||+|+++..
T Consensus 122 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 122 EVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp SCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 4 1 112 2457888899999999999763
No 165
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.43 E-value=2.8e-07 Score=88.98 Aligned_cols=100 Identities=14% Similarity=0.086 Sum_probs=80.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++. +|. .|+++|+|+.+++.+++++..++.. .+++++++|+..+.. ...||+|+.
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~--~~~-~v~gvD~s~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~--~~~fD~v~~ 138 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMAS--PER-FVVGLDISESALAKANETYGSSPKA--EYFSFVKEDVFTWRP--TELFDLIFD 138 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCB--TTE-EEEEECSCHHHHHHHHHHHTTSGGG--GGEEEECCCTTTCCC--SSCEEEEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHh--CCC-eEEEEECCHHHHHHHHHHhhccCCC--cceEEEECchhcCCC--CCCeeEEEE
Confidence 345899999999999999987 454 6999999999999999999876543 579999999987542 358999985
Q ss_pred CC-CC-----CChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-YG-----SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-yG-----s~~~fld~A~~~l~~gGlL~vTa 227 (581)
-. +. ....++..+.++|++||.|++..
T Consensus 139 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 171 (235)
T 3lcc_A 139 YVFFCAIEPEMRPAWAKSMYELLKPDGELITLM 171 (235)
T ss_dssp ESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEE
Confidence 33 21 23467888889999999998865
No 166
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.43 E-value=5.7e-07 Score=88.51 Aligned_cols=101 Identities=20% Similarity=0.185 Sum_probs=82.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.+++.. | .+|+++|+|+..++.+++++..+++. +++.+.++|+..+-. ....||+|+.-
T Consensus 62 ~~~vLDiGcG~G~~~~~l~~~~-~-~~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~~fD~v~~~ 136 (273)
T 3bus_A 62 GDRVLDVGCGIGKPAVRLATAR-D-VRVTGISISRPQVNQANARATAAGLA--NRVTFSYADAMDLPF-EDASFDAVWAL 136 (273)
T ss_dssp TCEEEEESCTTSHHHHHHHHHS-C-CEEEEEESCHHHHHHHHHHHHHTTCT--TTEEEEECCTTSCCS-CTTCEEEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhc-C-CEEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEECccccCCC-CCCCccEEEEe
Confidence 5699999999999999999863 4 58999999999999999999999986 579999999876421 23579999753
Q ss_pred -CC---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 -PY---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 -Py---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.+ ..+..++..+.+.|++||.|+++.
T Consensus 137 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 166 (273)
T 3bus_A 137 ESLHHMPDRGRALREMARVLRPGGTVAIAD 166 (273)
T ss_dssp SCTTTSSCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred chhhhCCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 32 234578888889999999999874
No 167
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.43 E-value=5.5e-07 Score=87.54 Aligned_cols=97 Identities=25% Similarity=0.354 Sum_probs=78.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. |. .|+++|+|+.+++.+++|+..+++ +++++++|+..+.. ...||+|++.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~~--~~-~v~gvD~s~~~l~~a~~~~~~~~~----~v~~~~~d~~~~~~--~~~fD~v~~~ 112 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAER--GY-EVVGLDLHEEMLRVARRKAKERNL----KIEFLQGDVLEIAF--KNEFDAVTMF 112 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHHHHTTC----CCEEEESCGGGCCC--CSCEEEEEEC
T ss_pred CCEEEEeCCCCCHHHHHHHHC--CC-eEEEEECCHHHHHHHHHHHHhcCC----ceEEEECChhhccc--CCCccEEEEc
Confidence 458999999999999999984 64 799999999999999999998875 47899999876532 3579999864
Q ss_pred ----CCCC---ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 ----PYGS---PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 ----PyGs---~~~fld~A~~~l~~gGlL~vTa 227 (581)
++-. ...++..+.+.|++||+|+++.
T Consensus 113 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 113 FSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp SSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 1222 2356777889999999998864
No 168
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.43 E-value=2.9e-07 Score=92.34 Aligned_cols=100 Identities=25% Similarity=0.360 Sum_probs=78.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCC-ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEG-IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~G-a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
+.+|||+-||||..++.+++.+.. -.+|+++|+|+..++.++++++..+.. .+++++++|+..+- -+.||+|.+
T Consensus 71 ~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~--~~v~~~~~D~~~~~---~~~~d~v~~ 145 (261)
T 4gek_A 71 GTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAP--TPVDVIEGDIRDIA---IENASMVVL 145 (261)
T ss_dssp TCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCS--SCEEEEESCTTTCC---CCSEEEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccC--ceEEEeeccccccc---cccccccee
Confidence 569999999999999999886421 137999999999999999999988775 68999999986542 246999976
Q ss_pred CC---CCCC---hHhHHHHHHhccCCCeEEEE
Q 047386 201 DP---YGSP---SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 201 DP---yGs~---~~fld~A~~~l~~gGlL~vT 226 (581)
-= |-.+ ..+|....+.|++||.|+++
T Consensus 146 ~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~ 177 (261)
T 4gek_A 146 NFTLQFLEPSERQALLDKIYQGLNPGGALVLS 177 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eeeeeecCchhHhHHHHHHHHHcCCCcEEEEE
Confidence 32 1111 24677778999999999886
No 169
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.42 E-value=6.1e-07 Score=92.29 Aligned_cols=104 Identities=18% Similarity=0.307 Sum_probs=87.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHH-HhC--CCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIK-FNG--SVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~-~N~--~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
+.+||=+-.|.|+..-+.++. +++.+|+.+|||+..++++++-+. .|+ ++ ..+++++.+|++.+|....++||+|
T Consensus 84 pk~VLIiGgGdG~~~revlk~-~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~-dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYD-DPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHTTGGG-CTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCeEEEECCCchHHHHHHHHc-CCcceEEEEcCCHHHHHHHHhcCccccccccC-CCcEEEEechHHHHHhhccccCCEE
Confidence 568999999999998888876 678999999999999999999874 332 22 2589999999999998777899999
Q ss_pred eeCCC---CC-----ChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPY---GS-----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPy---Gs-----~~~fld~A~~~l~~gGlL~vTa 227 (581)
++|.+ |. ..+|+..+-++|++||+|++-+
T Consensus 162 i~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 162 ISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred EEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 99975 22 2489999999999999999875
No 170
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.42 E-value=5e-07 Score=100.09 Aligned_cols=109 Identities=19% Similarity=0.185 Sum_probs=86.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcC--CccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH--HhhCCCccc
Q 047386 121 KPPRVLEALSASGLRALRYAREVE--GIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY--MLTHPKEFD 196 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~--Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~--l~~~~~~fD 196 (581)
.+.+|||..||||.+.+.++..++ +...++++|+|+.++.+++.|+.++|+.. .++.+.++|+... -.....+||
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~-~~~~I~~gDtL~~d~p~~~~~~fD 299 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI-ENQFLHNADTLDEDWPTQEPTNFD 299 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG-GGEEEEESCTTTSCSCCSSCCCBS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc-CccceEecceeccccccccccccc
Confidence 466999999999999999988763 35689999999999999999999999852 3678999998654 111246899
Q ss_pred EEeeCC-CCCC--------------------------hHhHHHHHHhcc-CCCeEEEEeccc
Q 047386 197 VVDLDP-YGSP--------------------------SVFLDSAIQSVA-DGGMLMCTATDM 230 (581)
Q Consensus 197 vIdLDP-yGs~--------------------------~~fld~A~~~l~-~gGlL~vTaTD~ 230 (581)
+|+..| |+.. -.|+..+++.|+ +||.+++-..+.
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~g 361 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPHG 361 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEETH
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecch
Confidence 999998 5421 027888999999 999987765443
No 171
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.42 E-value=4.4e-07 Score=88.49 Aligned_cols=98 Identities=14% Similarity=0.167 Sum_probs=79.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++.. |...|+++|+|+.+++.+++++. . .++++.++|+..+- .....||+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~----~--~~~~~~~~d~~~~~-~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT----S--PVVCYEQKAIEDIA-IEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC----C--TTEEEEECCGGGCC-CCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc----c--CCeEEEEcchhhCC-CCCCCeEEEEE
Confidence 4679999999999999999984 66699999999999999999877 1 46899999986542 12468999987
Q ss_pred CC-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.- + ..+..++..+.+.|++||.|+++.
T Consensus 115 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 145 (253)
T 3g5l_A 115 SLALHYIASFDDICKKVYINLKSSGSFIFSV 145 (253)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhhhhhHHHHHHHHHHHcCCCcEEEEEe
Confidence 54 1 234578888899999999999974
No 172
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.41 E-value=5.8e-07 Score=94.48 Aligned_cols=106 Identities=17% Similarity=0.202 Sum_probs=84.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh-----C-CCCCCcEEEEehhHHHHHh-----
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN-----G-SVACSKVESHLADARVYML----- 189 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N-----~-~~~~~~v~v~~~DA~~~l~----- 189 (581)
.+.+|||+-||+|..++.++.....-.+|+++|+|+.+++.+++|++.+ | +. ..+++++++|+..+..
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~-~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPS-RSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTT-CCCEEEEESCTTCGGGCBSCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccC-CCceEEEEccHHHhhhcccCC
Confidence 4679999999999999999987522348999999999999999999877 4 32 2478999999987631
Q ss_pred hCCCcccEEeeCC-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 190 THPKEFDVVDLDP-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 190 ~~~~~fDvIdLDP-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.....||+|+... + ..+..++..+.+.|++||+|+++.
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 1235899998765 2 224578888999999999999974
No 173
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.41 E-value=1.6e-06 Score=79.14 Aligned_cols=91 Identities=7% Similarity=0.091 Sum_probs=74.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. +. +|+++|+|+.+++.++++ . .++++.++| +......||+|++.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~-----~---~~v~~~~~d----~~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEF--AT-KLYCIDINVIALKEVKEK-----F---DSVITLSDP----KEIPDNSVDFILFA 82 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTT--EE-EEEEECSCHHHHHHHHHH-----C---TTSEEESSG----GGSCTTCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhh--cC-eEEEEeCCHHHHHHHHHh-----C---CCcEEEeCC----CCCCCCceEEEEEc
Confidence 558999999999999999985 43 899999999999999998 2 357899999 33234689999866
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.+.|++||.|+++.
T Consensus 83 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 112 (170)
T 3i9f_A 83 NSFHDMDDKQHVISEVKRILKDDGRVIIID 112 (170)
T ss_dssp SCSTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhcccCHHHHHHHHHHhcCCCCEEEEEE
Confidence 4 2 234578888999999999999974
No 174
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.40 E-value=7.1e-07 Score=89.20 Aligned_cols=102 Identities=10% Similarity=0.085 Sum_probs=84.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++... |+ +|+++|+|+.+++.+++++...++. .++++.++|+..+-. ....||+|++
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~-~~-~v~gvD~s~~~~~~a~~~~~~~~~~--~~~~~~~~d~~~~~~-~~~~fD~v~~ 156 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF-GV-SIDCLNIAPVQNKRNEEYNNQAGLA--DNITVKYGSFLEIPC-EDNSYDFIWS 156 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH-CC-EEEEEESCHHHHHHHHHHHHHHTCT--TTEEEEECCTTSCSS-CTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh-CC-EEEEEeCCHHHHHHHHHHHHhcCCC--cceEEEEcCcccCCC-CCCCEeEEEe
Confidence 35699999999999999999864 44 7999999999999999999999985 579999999876421 2357999986
Q ss_pred C-C---CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 D-P---YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 D-P---yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- . +..+..++..+.+.|++||.|+++.
T Consensus 157 ~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~ 187 (297)
T 2o57_A 157 QDAFLHSPDKLKVFQECARVLKPRGVMAITD 187 (297)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhcCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 4 2 2334678888899999999999975
No 175
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.40 E-value=7.8e-07 Score=95.67 Aligned_cols=104 Identities=11% Similarity=0.095 Sum_probs=79.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHH-------HHhCCCCCCcEEEEehhHHHHHhhC-C
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNI-------KFNGSVACSKVESHLADARVYMLTH-P 192 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni-------~~N~~~~~~~v~v~~~DA~~~l~~~-~ 192 (581)
.+.+|||+-||+|...+.+|.+ .|+.+|+++|+|+.+++++++|+ +.+|+. ..+|+++++|+..+-... -
T Consensus 173 ~gd~VLDLGCGtG~l~l~lA~~-~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~-~~rVefi~GD~~~lp~~d~~ 250 (438)
T 3uwp_A 173 DDDLFVDLGSGVGQVVLQVAAA-TNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKK-HAEYTLERGDFLSEEWRERI 250 (438)
T ss_dssp TTCEEEEESCTTSHHHHHHHHH-CCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBC-CCEEEEEECCTTSHHHHHHH
T ss_pred CCCEEEEeCCCCCHHHHHHHHH-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCC-CCCeEEEECcccCCcccccc
Confidence 4669999999999999999987 47788999999999999999876 456763 258999999987653211 1
Q ss_pred CcccEEeeCCCCCC---hHhHHHHHHhccCCCeEEEE
Q 047386 193 KEFDVVDLDPYGSP---SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 193 ~~fDvIdLDPyGs~---~~fld~A~~~l~~gGlL~vT 226 (581)
..||+|++.++-.. ...|...++.|++||.|+++
T Consensus 251 ~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 251 ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp HTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEES
T ss_pred CCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEe
Confidence 36999999874332 12344456789999999864
No 176
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.40 E-value=1.2e-06 Score=82.32 Aligned_cols=96 Identities=14% Similarity=0.181 Sum_probs=78.0
Q ss_pred eEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCCC
Q 047386 124 RVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDPY 203 (581)
Q Consensus 124 ~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDPy 203 (581)
+|||+.||+|..++.++.. |. +|+++|+|+.+++.+++++..+++ ++.+.++|+..+-. ....||+|++...
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~-~~~~fD~v~~~~~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GY-EVTAVDQSSVGLAKAKQLAQEKGV----KITTVQSNLADFDI-VADAWEGIVSIFC 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TC-EEEEECSSHHHHHHHHHHHHHHTC----CEEEECCBTTTBSC-CTTTCSEEEEECC
T ss_pred CEEEECCCCCHhHHHHHhC--CC-eEEEEECCHHHHHHHHHHHHhcCC----ceEEEEcChhhcCC-CcCCccEEEEEhh
Confidence 9999999999999998884 55 899999999999999999998875 47899999876521 2357999987432
Q ss_pred CC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 204 GS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 204 Gs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
-. ...++..+.++|++||.|+++.
T Consensus 104 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 131 (202)
T 2kw5_A 104 HLPSSLRQQLYPKVYQGLKPGGVFILEG 131 (202)
T ss_dssp CCCHHHHHHHHHHHHTTCCSSEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 11 2357777889999999999975
No 177
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.40 E-value=1.7e-07 Score=103.73 Aligned_cols=105 Identities=14% Similarity=0.090 Sum_probs=81.3
Q ss_pred eEEEecCcccHHHHHHhhhcCC--------------ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh
Q 047386 124 RVLEALSASGLRALRYAREVEG--------------IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML 189 (581)
Q Consensus 124 ~VLDafsgSG~rgIr~a~E~~G--------------a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~ 189 (581)
+|||..||||.+-+.++..+.. ...++++|+|+.++++++.|+.++|+. ..+.+.++|+...-.
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~--~~i~i~~gDtL~~~~ 324 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGID--FNFGKKNADSFLDDQ 324 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCC--CBCCSSSCCTTTSCS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCC--cccceeccchhcCcc
Confidence 8999999999999988654320 247999999999999999999999986 345558888754321
Q ss_pred hCCCcccEEeeCC-CCCC--------------------------------hHhHHHHHHhccCCCeEEEEeccc
Q 047386 190 THPKEFDVVDLDP-YGSP--------------------------------SVFLDSAIQSVADGGMLMCTATDM 230 (581)
Q Consensus 190 ~~~~~fDvIdLDP-yGs~--------------------------------~~fld~A~~~l~~gGlL~vTaTD~ 230 (581)
....+||+|+.+| |+.. -.|+..+++.|++||.+++-..+.
T Consensus 325 ~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~g 398 (544)
T 3khk_A 325 HPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLANG 398 (544)
T ss_dssp CTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEETH
T ss_pred cccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEecch
Confidence 1236899999998 6531 048899999999999987765443
No 178
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.40 E-value=8.7e-07 Score=86.84 Aligned_cols=100 Identities=25% Similarity=0.313 Sum_probs=81.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..+..++.. + .+|+++|+|+..++.+++++..+++. ++.+.++|+..+- .....||+|+.
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~--~-~~v~gvD~s~~~l~~a~~~~~~~~~~---~v~~~~~d~~~l~-~~~~~fD~V~~ 109 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPF--V-KKVVAFDLTEDILKVARAFIEGNGHQ---QVEYVQGDAEQMP-FTDERFHIVTC 109 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGG--S-SEEEEEESCHHHHHHHHHHHHHTTCC---SEEEEECCC-CCC-SCTTCEEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHh--C-CEEEEEeCCHHHHHHHHHHHHhcCCC---ceEEEEecHHhCC-CCCCCEEEEEE
Confidence 3569999999999999999885 3 48999999999999999999998874 6899999987642 12368999986
Q ss_pred CC----CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP----YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP----yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.- +..+..++..+.+.|++||.|+++.
T Consensus 110 ~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~ 140 (260)
T 1vl5_A 110 RIAAHHFPNPASFVSEAYRVLKKGGQLLLVD 140 (260)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhhhHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 52 1234578888899999999999964
No 179
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.39 E-value=4e-07 Score=87.55 Aligned_cols=96 Identities=17% Similarity=0.225 Sum_probs=77.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. + .+|+++|+|+.+++.+++|+..++ +++++++|+...+.. ...||+|++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~--~-~~v~~vD~~~~~~~~a~~~~~~~~-----~v~~~~~d~~~~~~~-~~~fD~v~~ 140 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEI--V-DKVVSVEINEKMYNYASKLLSYYN-----NIKLILGDGTLGYEE-EKPYDRVVV 140 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH--S-SEEEEEESCHHHHHHHHHHHTTCS-----SEEEEESCGGGCCGG-GCCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHH--c-CEEEEEeCCHHHHHHHHHHHhhcC-----CeEEEECCccccccc-CCCccEEEE
Confidence 4569999999999999999885 4 689999999999999999998665 478999998763322 357999999
Q ss_pred CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+..-. .+.+.+.+.|++||.|++..
T Consensus 141 ~~~~~--~~~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 141 WATAP--TLLCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp SSBBS--SCCHHHHHTEEEEEEEEEEE
T ss_pred CCcHH--HHHHHHHHHcCCCcEEEEEE
Confidence 87211 23356788999999999985
No 180
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.38 E-value=3.4e-07 Score=88.43 Aligned_cols=100 Identities=17% Similarity=0.250 Sum_probs=80.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCc------cEEEEEeCCHHHHHHHHHHHHHhC-----CCCCCcEEEEehhHHHHHh
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGI------GQVVALDNDKASVEACRRNIKFNG-----SVACSKVESHLADARVYML 189 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga------~~V~anD~s~~Ave~i~~Ni~~N~-----~~~~~~v~v~~~DA~~~l~ 189 (581)
.+.+|||+.||+|..++.++... |. .+|+++|+++.+++.+++|+..++ . .++++.++|+...+.
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~-~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~ 159 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYI-KAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS---GQLLIVEGDGRKGYP 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-HHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH---TSEEEEESCGGGCCG
T ss_pred CCCEEEEECCCccHHHHHHHHhc-ccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC---CceEEEECCcccCCC
Confidence 35699999999999999998753 32 489999999999999999999876 3 368999999876433
Q ss_pred hCCCcccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 190 THPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 190 ~~~~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
. ...||+|+++..-. .+++.+.+.|++||.|+++.
T Consensus 160 ~-~~~fD~I~~~~~~~--~~~~~~~~~LkpgG~lvi~~ 194 (227)
T 1r18_A 160 P-NAPYNAIHVGAAAP--DTPTELINQLASGGRLIVPV 194 (227)
T ss_dssp G-GCSEEEEEECSCBS--SCCHHHHHTEEEEEEEEEEE
T ss_pred c-CCCccEEEECCchH--HHHHHHHHHhcCCCEEEEEE
Confidence 2 25799999997422 34477788999999999985
No 181
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.38 E-value=1.7e-07 Score=88.08 Aligned_cols=98 Identities=16% Similarity=0.161 Sum_probs=77.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. |...|+++|+|+.+++.+++|+.. . .++++.++|+..+- .....||+|+..
T Consensus 43 ~~~vLdiGcG~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~--~---~~i~~~~~d~~~~~-~~~~~fD~v~~~ 114 (215)
T 2pxx_A 43 EDRILVLGCGNSALSYELFLG--GFPNVTSVDYSSVVVAAMQACYAH--V---PQLRWETMDVRKLD-FPSASFDVVLEK 114 (215)
T ss_dssp TCCEEEETCTTCSHHHHHHHT--TCCCEEEEESCHHHHHHHHHHTTT--C---TTCEEEECCTTSCC-SCSSCEEEEEEE
T ss_pred CCeEEEECCCCcHHHHHHHHc--CCCcEEEEeCCHHHHHHHHHhccc--C---CCcEEEEcchhcCC-CCCCcccEEEEC
Confidence 568999999999999999984 655899999999999999999873 2 35788999987642 123579999875
Q ss_pred C-CC------------------CChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-YG------------------SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-yG------------------s~~~fld~A~~~l~~gGlL~vTa 227 (581)
+ +. ....++..+.+.|++||.|++..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 159 (215)
T 2pxx_A 115 GTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMT 159 (215)
T ss_dssp SHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEe
Confidence 4 21 11467788889999999999875
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.37 E-value=1e-06 Score=95.06 Aligned_cols=104 Identities=15% Similarity=0.138 Sum_probs=79.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHH-------HHHHHHhCCCCCCcEEEEehhHHHH---Hhh
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEAC-------RRNIKFNGSVACSKVESHLADARVY---MLT 190 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i-------~~Ni~~N~~~~~~~v~v~~~DA~~~---l~~ 190 (581)
.+.+|||+.||||..++.+|... |+.+|+++|+|+.+++.+ ++|++.+|+. ..+++++++|+... +..
T Consensus 242 ~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~-~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 242 KGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMR-LNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBC-CCCEEEEESSCSTTCHHHHH
T ss_pred CCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCC-CCceEEEEcCcccccccccc
Confidence 46799999999999999999874 567899999999999999 9999999853 14789988865421 211
Q ss_pred CCCcccEEeeCCCCCC---hHhHHHHHHhccCCCeEEEE
Q 047386 191 HPKEFDVVDLDPYGSP---SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 191 ~~~~fDvIdLDPyGs~---~~fld~A~~~l~~gGlL~vT 226 (581)
....||+|++..+... ...|....+.|++||.|++.
T Consensus 320 ~~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 320 LIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp HGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEES
T ss_pred ccCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEe
Confidence 1247999999754321 23456677899999999885
No 183
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.36 E-value=7.1e-07 Score=85.80 Aligned_cols=96 Identities=21% Similarity=0.257 Sum_probs=77.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. .+|+++|+|+.+++.+++|+..++. ++++.++|+..+-. ...||+|++.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~--~~~fD~v~~~ 103 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETNR----HVDFWVQDMRELEL--PEPVDAITIL 103 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTTC----CCEEEECCGGGCCC--SSCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcCC----ceEEEEcChhhcCC--CCCcCEEEEe
Confidence 458999999999999999873 6899999999999999999998773 47889999876532 3679999985
Q ss_pred C--C--C-C---ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P--Y--G-S---PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P--y--G-s---~~~fld~A~~~l~~gGlL~vTa 227 (581)
. + - . ...++..+.+.|++||.|+++.
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 137 (243)
T 3d2l_A 104 CDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDV 137 (243)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 3 2 1 1 2356777888999999999865
No 184
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.36 E-value=3.7e-07 Score=87.75 Aligned_cols=98 Identities=15% Similarity=0.203 Sum_probs=79.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...++ .+|+++|+|+.+++.+++++..++ +++++++|+..+... ..||+|++.
T Consensus 45 ~~~vLDiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~-----~~~~~~~d~~~~~~~--~~fD~v~~~ 116 (234)
T 3dtn_A 45 NPDILDLGAGTGLLSAFLMEKYPE-ATFTLVDMSEKMLEIAKNRFRGNL-----KVKYIEADYSKYDFE--EKYDMVVSA 116 (234)
T ss_dssp SCEEEEETCTTSHHHHHHHHHCTT-CEEEEEESCHHHHHHHHHHTCSCT-----TEEEEESCTTTCCCC--SCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHhCCC-CeEEEEECCHHHHHHHHHhhccCC-----CEEEEeCchhccCCC--CCceEEEEe
Confidence 568999999999999999987544 579999999999999999986443 588999998776432 689999987
Q ss_pred C-C-CCCh----HhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GSPS----VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs~~----~fld~A~~~l~~gGlL~vTa 227 (581)
. + ..+. .++..+.+.|++||.|+++.
T Consensus 117 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 148 (234)
T 3dtn_A 117 LSIHHLEDEDKKELYKRSYSILKESGIFINAD 148 (234)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5 2 1122 37888889999999999874
No 185
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.35 E-value=5.7e-07 Score=89.79 Aligned_cols=103 Identities=11% Similarity=0.084 Sum_probs=75.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH----------hCC----CCCCcEEEEehhHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF----------NGS----VACSKVESHLADARV 186 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~----------N~~----~~~~~v~v~~~DA~~ 186 (581)
.+.+|||+.||+|..++.+|.. |. .|+++|+|+.+++.++++... +++ ....++++.++|+..
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~ 144 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD 144 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence 4669999999999999999884 76 799999999999999766532 110 001468999999987
Q ss_pred HHhhCCCcccEEeeC-CCC-CC----hHhHHHHHHhccCCCeEEEE
Q 047386 187 YMLTHPKEFDVVDLD-PYG-SP----SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 187 ~l~~~~~~fDvIdLD-PyG-s~----~~fld~A~~~l~~gGlL~vT 226 (581)
+-......||+|+.- .+. .+ ..++....++|++||.|++.
T Consensus 145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~ 190 (252)
T 2gb4_A 145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVA 190 (252)
T ss_dssp GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 654322589999732 111 11 24777788999999999643
No 186
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.34 E-value=8.6e-07 Score=88.25 Aligned_cols=105 Identities=17% Similarity=0.178 Sum_probs=80.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC-CCcEEEEehhHHHHHhh--CCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA-CSKVESHLADARVYMLT--HPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~-~~~v~v~~~DA~~~l~~--~~~~fDvI 198 (581)
+.+|||+-||+|..++.++.. |+ +|+++|+|+.+++.+++|+...+... ..++.+..+|+..+-.. ....||+|
T Consensus 58 ~~~vLDiGcG~G~~~~~l~~~--~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V 134 (293)
T 3thr_A 58 CHRVLDVACGTGVDSIMLVEE--GF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAV 134 (293)
T ss_dssp CCEEEETTCTTSHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHC--CC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEE
Confidence 568999999999999999985 65 89999999999999999986544320 12467888998766411 24689999
Q ss_pred eeC--CC---CC-------ChHhHHHHHHhccCCCeEEEEecc
Q 047386 199 DLD--PY---GS-------PSVFLDSAIQSVADGGMLMCTATD 229 (581)
Q Consensus 199 dLD--Py---Gs-------~~~fld~A~~~l~~gGlL~vTaTD 229 (581)
++- .+ .. ...++..+.++|++||+|+++..+
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 985 22 11 346788889999999999998643
No 187
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.32 E-value=5.2e-07 Score=87.17 Aligned_cols=91 Identities=16% Similarity=0.174 Sum_probs=74.7
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvId 199 (581)
.+.+|||+.||+|..++.++.. |+ +|+++|+|+.+++.+++| . .+++++++|+...+... ...||+|+
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~-----~---~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQ--AA-RWAAYDFSPELLKLARAN-----A---PHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG--SS-EEEEEESCHHHHHHHHHH-----C---TTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc--CC-EEEEEECCHHHHHHHHHh-----C---CCceEEEcchhhccCCcCCCCEEEEE
Confidence 3569999999999999999985 54 899999999999999998 2 25789999986544322 46899999
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEE
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLM 224 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~ 224 (581)
..+ .+..++..+.+.|++||.|+
T Consensus 117 ~~~--~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 117 SRR--GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EES--CCSGGGGGHHHHEEEEEEEE
T ss_pred eCC--CHHHHHHHHHHHcCCCcEEE
Confidence 874 24578888899999999998
No 188
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.32 E-value=7.3e-06 Score=76.95 Aligned_cols=94 Identities=21% Similarity=0.129 Sum_probs=76.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. |. +|+++|+|+.+++.++++. .+++++++|+..+-. ....||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~-~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~-~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GH-QIEGLEPATRLVELARQTH--------PSVTFHHGTITDLSD-SPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TC-CEEEECCCHHHHHHHHHHC--------TTSEEECCCGGGGGG-SCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CC-eEEEEeCCHHHHHHHHHhC--------CCCeEEeCccccccc-CCCCeEEEEeh
Confidence 568999999999999999884 55 7999999999999999872 246899999977532 24689999884
Q ss_pred C-C-C----CChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-G----SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-G----s~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + . .+..++..+.+.|++||.|+++.
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~ 141 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSF 141 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 3 1 1 23578888899999999999975
No 189
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.31 E-value=5.3e-06 Score=76.30 Aligned_cols=94 Identities=14% Similarity=0.180 Sum_probs=74.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. | .+|+++|+|+.+++.+++|+. ++.++++|+..+-. ....||+|++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~-~~v~~~D~~~~~~~~a~~~~~--------~~~~~~~d~~~~~~-~~~~~D~i~~~ 114 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSKQ--G-HDVLGTDLDPILIDYAKQDFP--------EARWVVGDLSVDQI-SETDFDLIVSA 114 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTSCC-CCCCEEEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHC--C-CcEEEEcCCHHHHHHHHHhCC--------CCcEEEcccccCCC-CCCceeEEEEC
Confidence 568999999999999999884 5 479999999999999998863 25788899876421 23579999998
Q ss_pred C-C---CC---ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GS---PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs---~~~fld~A~~~l~~gGlL~vTa 227 (581)
| . -. ...++..+.+.|++||.|+++.
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~ 147 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGF 147 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEe
Confidence 4 2 11 1467888889999999999975
No 190
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.29 E-value=6.6e-06 Score=79.73 Aligned_cols=93 Identities=17% Similarity=0.196 Sum_probs=74.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdL 200 (581)
+.+|||+-||+|.+++.++.. |+ +|+++|+|+.+++.++++ ++++++|+..++.. ....||+|+.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~-~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKEE--GI-ESIGVDINEDMIKFCEGK-----------FNVVKSDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHHH--TC-CEEEECSCHHHHHHHHTT-----------SEEECSCHHHHHHTSCTTCBSEEEE
T ss_pred CCeEEEEeCCCCHHHHHHHhC--CC-cEEEEECCHHHHHHHHhh-----------cceeeccHHHHhhhcCCCCeeEEEE
Confidence 468999999999999988875 65 599999999999998876 36789999988643 2468999986
Q ss_pred CC-C---CCC--hHhHHHHHHhccCCCeEEEEec
Q 047386 201 DP-Y---GSP--SVFLDSAIQSVADGGMLMCTAT 228 (581)
Q Consensus 201 DP-y---Gs~--~~fld~A~~~l~~gGlL~vTaT 228 (581)
.- + ..+ ..++..+.+.|++||+|+++..
T Consensus 108 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 141 (240)
T 3dli_A 108 SHFVEHLDPERLFELLSLCYSKMKYSSYIVIESP 141 (240)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEE
T ss_pred CCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 43 1 222 4678888899999999999763
No 191
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.28 E-value=2.6e-06 Score=81.99 Aligned_cols=96 Identities=13% Similarity=0.178 Sum_probs=76.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. |+ +|+++|+|+.+++.++++.. . .+++++++|+..+-. ....||+|++-
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~~~----~--~~~~~~~~d~~~~~~-~~~~fD~v~~~ 123 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSRT--GY-KAVGVDISEVMIQKGKERGE----G--PDLSFIKGDLSSLPF-ENEQFEAIMAI 123 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHHT--TC-EEEEEESCHHHHHHHHTTTC----B--TTEEEEECBTTBCSS-CTTCEEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHHc--CC-eEEEEECCHHHHHHHHhhcc----c--CCceEEEcchhcCCC-CCCCccEEEEc
Confidence 569999999999999999985 55 79999999999999988851 1 468899999876432 24689999864
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.+.|++||.|+++.
T Consensus 124 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 153 (242)
T 3l8d_A 124 NSLEWTEEPLRALNEIKRVLKSDGYACIAI 153 (242)
T ss_dssp SCTTSSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHhhccCHHHHHHHHHHHhCCCeEEEEEE
Confidence 3 2 224578888999999999999975
No 192
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.28 E-value=9.5e-07 Score=84.91 Aligned_cols=98 Identities=15% Similarity=0.151 Sum_probs=78.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||+|..++.++.. |..+|+++|+|+.+++.+++++.. .++++.++|+..+.. ....||+|++
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~------~~~~~~~~d~~~~~~-~~~~fD~v~~ 113 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD------TGITYERADLDKLHL-PQDSFDLAYS 113 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS------SSEEEEECCGGGCCC-CTTCEEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc------CCceEEEcChhhccC-CCCCceEEEE
Confidence 4669999999999999999884 666899999999999999887653 257889999876432 2457999987
Q ss_pred CC-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.. + ..+..++..+.+.|++||.|+++.
T Consensus 114 ~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 114 SLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 54 2 224578888899999999999975
No 193
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.27 E-value=4.8e-07 Score=95.06 Aligned_cols=93 Identities=25% Similarity=0.340 Sum_probs=74.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||||.+++.++........|+++|+|+.+++.+ .+++++++|+..+.. ..+||+|+.+
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~~~D~~~~~~--~~~fD~Ii~N 105 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGILADFLLWEP--GEAFDLILGN 105 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEEESCGGGCCC--SSCEEEEEEC
T ss_pred CCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEEeCChhhcCc--cCCCCEEEEC
Confidence 44899999999999999998653346899999999998766 247899999876532 3589999999
Q ss_pred C-CCCC--------------------------------hHhHHHHHHhccCCCeEEEEec
Q 047386 202 P-YGSP--------------------------------SVFLDSAIQSVADGGMLMCTAT 228 (581)
Q Consensus 202 P-yGs~--------------------------------~~fld~A~~~l~~gGlL~vTaT 228 (581)
| |+.. ..|+..+.++|++||.+++...
T Consensus 106 PPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 106 PPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp CCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 8 5431 0568889999999999988753
No 194
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.27 E-value=1.1e-06 Score=83.98 Aligned_cols=95 Identities=17% Similarity=0.222 Sum_probs=76.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++.. |. .|+++|+|+.+++.+++++.. +++++++|+..+. ....||+|++
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~--~~-~v~gvD~s~~~~~~a~~~~~~-------~v~~~~~d~~~~~--~~~~fD~v~~ 109 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEH--FN-DITCVEASEEAISHAQGRLKD-------GITYIHSRFEDAQ--LPRRYDNIVL 109 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTT--CS-CEEEEESCHHHHHHHHHHSCS-------CEEEEESCGGGCC--CSSCEEEEEE
T ss_pred CCCcEEEECCCCCHHHHHHHHh--CC-cEEEEeCCHHHHHHHHHhhhC-------CeEEEEccHHHcC--cCCcccEEEE
Confidence 3568999999999999999884 54 699999999999999887642 4789999998763 3467999986
Q ss_pred CC----CCCChHhHHHHH-HhccCCCeEEEEe
Q 047386 201 DP----YGSPSVFLDSAI-QSVADGGMLMCTA 227 (581)
Q Consensus 201 DP----yGs~~~fld~A~-~~l~~gGlL~vTa 227 (581)
-- ...+..++..+. +.|++||.|+++.
T Consensus 110 ~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~ 141 (250)
T 2p7i_A 110 THVLEHIDDPVALLKRINDDWLAEGGRLFLVC 141 (250)
T ss_dssp ESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEc
Confidence 32 112357888888 9999999999975
No 195
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.27 E-value=8e-07 Score=83.64 Aligned_cols=99 Identities=14% Similarity=0.141 Sum_probs=76.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.+ .|. +|+++|+|+.+++.+++++..++. ++.+.++|+..+- .....||+|+..
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~-~~~-~v~~vD~s~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~-~~~~~fD~v~~~ 96 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVE-DGY-KTYGIEISDLQLKKAENFSRENNF----KLNISKGDIRKLP-FKDESMSFVYSY 96 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHH-TTC-EEEEEECCHHHHHHHHHHHHHHTC----CCCEEECCTTSCC-SCTTCEEEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHh-CCC-EEEEEECCHHHHHHHHHHHHhcCC----ceEEEECchhhCC-CCCCceeEEEEc
Confidence 468999999999987776655 454 799999999999999999998774 4678899986542 123579999875
Q ss_pred -C-CCC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 -P-YGS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 -P-yGs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
. +.. +..++..+.+.|++||.|+++.
T Consensus 97 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 128 (209)
T 2p8j_A 97 GTIFHMRKNDVKEAIDEIKRVLKPGGLACINF 128 (209)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 2 222 2356777889999999999875
No 196
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.27 E-value=2e-06 Score=83.75 Aligned_cols=107 Identities=19% Similarity=0.063 Sum_probs=78.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|.+++.++.+.+++ +|++.|+|+.+++++++|+..||+. .++++ .|..... ....||+|.+=
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~p~a-~~~A~Di~~~~leiar~~~~~~g~~--~~v~~--~d~~~~~--~~~~~DvVLa~ 122 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNENEKI-IYHAYDIDRAEIAFLSSIIGKLKTT--IKYRF--LNKESDV--YKGTYDVVFLL 122 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSSCCC-EEEEECSCHHHHHHHHHHHHHSCCS--SEEEE--ECCHHHH--TTSEEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcCCCC-EEEEEeCCHHHHHHHHHHHHhcCCC--ccEEE--ecccccC--CCCCcChhhHh
Confidence 4589999999999999999988888 9999999999999999999999986 46666 5554443 35679999642
Q ss_pred C-C--C-CChHhHHHHHHhccCCCeEEEEeccchhhcCCC
Q 047386 202 P-Y--G-SPSVFLDSAIQSVADGGMLMCTATDMAVLCGGN 237 (581)
Q Consensus 202 P-y--G-s~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~ 237 (581)
= + = -...-+...++.|++||+++-. |+..|.|..
T Consensus 123 k~LHlL~~~~~al~~v~~~L~pggvfISf--ptksl~Gr~ 160 (200)
T 3fzg_A 123 KMLPVLKQQDVNILDFLQLFHTQNFVISF--PIKSLSGKE 160 (200)
T ss_dssp TCHHHHHHTTCCHHHHHHTCEEEEEEEEE--ECCCCC--C
T ss_pred hHHHhhhhhHHHHHHHHHHhCCCCEEEEe--ChHHhcCCC
Confidence 1 1 0 0001122567889999877543 567777644
No 197
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.26 E-value=2.5e-06 Score=80.63 Aligned_cols=97 Identities=25% Similarity=0.318 Sum_probs=76.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---CCCcccE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT---HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~---~~~~fDv 197 (581)
.+.+|||+-||+|..++.++.. |+ +|+++|+|+.+++.++++ . .+.+.++|+..+... ....||+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~---~------~~~~~~~~~~~~~~~~~~~~~~fD~ 119 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADR--GI-EAVGVDGDRTLVDAARAA---G------AGEVHLASYAQLAEAKVPVGKDYDL 119 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTT--TC-EEEEEESCHHHHHHHHHT---C------SSCEEECCHHHHHTTCSCCCCCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC--CC-EEEEEcCCHHHHHHHHHh---c------ccccchhhHHhhcccccccCCCccE
Confidence 3569999999999999999885 55 799999999999999888 2 235778888877322 2346999
Q ss_pred EeeCC-C--CCChHhHHHHHHhccCCCeEEEEecc
Q 047386 198 VDLDP-Y--GSPSVFLDSAIQSVADGGMLMCTATD 229 (581)
Q Consensus 198 IdLDP-y--Gs~~~fld~A~~~l~~gGlL~vTaTD 229 (581)
|++.. + ..+..++..+.+.|++||.|+++...
T Consensus 120 v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 120 ICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 98754 2 23567889899999999999998643
No 198
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.26 E-value=1e-06 Score=84.46 Aligned_cols=97 Identities=12% Similarity=0.175 Sum_probs=79.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. | .+|+++|+|+.+++.+++++..+++ +++++++|+..+.. ...||+|++.
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~s~~~~~~a~~~~~~~~~----~~~~~~~d~~~~~~--~~~fD~v~~~ 108 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCPK--F-KNTWAVDLSQEMLSEAENKFRSQGL----KPRLACQDISNLNI--NRKFDLITCC 108 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGGG--S-SEEEEECSCHHHHHHHHHHHHHTTC----CCEEECCCGGGCCC--SCCEEEEEEC
T ss_pred CCeEEEeCCCCCHHHHHHHHC--C-CcEEEEECCHHHHHHHHHHHhhcCC----CeEEEecccccCCc--cCCceEEEEc
Confidence 568999999999999999885 5 4799999999999999999998775 46889999876532 2679999986
Q ss_pred C----CC-C---ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P----YG-S---PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P----yG-s---~~~fld~A~~~l~~gGlL~vTa 227 (581)
. +- . ...++..+.++|++||+|+++.
T Consensus 109 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 109 LDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CccccccCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4 22 1 2356777788999999999965
No 199
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.26 E-value=1.6e-06 Score=81.83 Aligned_cols=94 Identities=24% Similarity=0.307 Sum_probs=76.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. |. +|+++|+|+.+++.+++ ++. .+++++++|+..+. ....||+|++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~--~~-~v~~~D~s~~~~~~a~~----~~~---~~~~~~~~d~~~~~--~~~~~D~v~~~ 114 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL--AD-RVTALDGSAEMIAEAGR----HGL---DNVEFRQQDLFDWT--PDRQWDAVFFA 114 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH--SS-EEEEEESCHHHHHHHGG----GCC---TTEEEEECCTTSCC--CSSCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhc--CC-eEEEEeCCHHHHHHHHh----cCC---CCeEEEecccccCC--CCCceeEEEEe
Confidence 458999999999999999985 54 89999999999999988 554 36899999997762 35689999876
Q ss_pred C-C-CCC----hHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GSP----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs~----~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+ ..++..+.+.|++||.|+++.
T Consensus 115 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 146 (218)
T 3ou2_A 115 HWLAHVPDDRFEAFWESVRSAVAPGGVVEFVD 146 (218)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 4 1 112 457777889999999998875
No 200
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.26 E-value=1.2e-06 Score=82.89 Aligned_cols=92 Identities=16% Similarity=0.172 Sum_probs=73.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. |. .|+++|+|+.+++.+++++ ++ .+.++|+..+- ....||+|++.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~--~~-~v~~vD~s~~~~~~a~~~~---~~------~~~~~d~~~~~--~~~~fD~v~~~ 109 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLAA--GF-DVDATDGSPELAAEASRRL---GR------PVRTMLFHQLD--AIDAYDAVWAH 109 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHH---TS------CCEECCGGGCC--CCSCEEEEEEC
T ss_pred CCcEEEECCCCCHHHHHHHHc--CC-eEEEECCCHHHHHHHHHhc---CC------ceEEeeeccCC--CCCcEEEEEec
Confidence 568999999999999999984 54 7999999999999999998 33 35677776554 35689999987
Q ss_pred C-C-CC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
. + .. ...++..+.+.|++||.|+++.
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 141 (211)
T 3e23_A 110 ACLLHVPRDELADVLKLIWRALKPGGLFYASY 141 (211)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5 2 11 2357788889999999999974
No 201
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.25 E-value=7.7e-07 Score=86.29 Aligned_cols=99 Identities=15% Similarity=0.130 Sum_probs=78.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++.. +...|+++|+|+.+++.+++++..+ .+++++++|+..+-. ....||+|++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~-~~~~fD~v~~ 164 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTK--LYATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATL-PPNTYDLIVI 164 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHH--HCSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCC-CSSCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHh--hcCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCC-CCCCeEEEEE
Confidence 3569999999999999998885 4678999999999999999998754 368899999876422 2357999987
Q ss_pred CC-C-CC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y-GS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y-Gs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
-- + .. ...++..+.+.|++||+|+++.
T Consensus 165 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 197 (254)
T 1xtp_A 165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKE 197 (254)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 54 1 11 2357778889999999999975
No 202
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.25 E-value=1.2e-06 Score=83.14 Aligned_cols=95 Identities=12% Similarity=0.119 Sum_probs=75.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..+..++.. | .+|+++|+|+.+++.+++++. . ++++.++|+..+... ..||+|++
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~~~-~------~~~~~~~d~~~~~~~--~~fD~v~~ 112 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLA--G-RTVYGIEPSREMRMIAKEKLP-K------EFSITEGDFLSFEVP--TSIDTIVS 112 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHSC-T------TCCEESCCSSSCCCC--SCCSEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHhC--C-CeEEEEeCCHHHHHHHHHhCC-C------ceEEEeCChhhcCCC--CCeEEEEE
Confidence 4669999999999999999884 5 479999999999999998876 1 457889998765432 68999988
Q ss_pred CC-C-CCCh--H--hHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y-GSPS--V--FLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y-Gs~~--~--fld~A~~~l~~gGlL~vTa 227 (581)
.- + ..+. . ++..+.+.|++||.|+++.
T Consensus 113 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 145 (220)
T 3hnr_A 113 TYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFAD 145 (220)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CcchhcCChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 64 2 1122 2 7888889999999999974
No 203
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.25 E-value=1.6e-06 Score=89.22 Aligned_cols=77 Identities=13% Similarity=0.091 Sum_probs=64.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH---HhhCC-CcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY---MLTHP-KEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~---l~~~~-~~fDv 197 (581)
+.+|||+.||+|..++.++...+ ..+|+++|+|+.+++.+++|++.++ . +++++++|+..+ +...+ ..||.
T Consensus 27 g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~---~v~~v~~d~~~l~~~l~~~g~~~~D~ 101 (301)
T 1m6y_A 27 EKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-D---RVSLFKVSYREADFLLKTLGIEKVDG 101 (301)
T ss_dssp TCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-T---TEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred CCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-C---cEEEEECCHHHHHHHHHhcCCCCCCE
Confidence 56899999999999999998754 4689999999999999999999887 2 689999998665 22222 47999
Q ss_pred EeeCCC
Q 047386 198 VDLDPY 203 (581)
Q Consensus 198 IdLDPy 203 (581)
|++||.
T Consensus 102 Vl~D~g 107 (301)
T 1m6y_A 102 ILMDLG 107 (301)
T ss_dssp EEEECS
T ss_pred EEEcCc
Confidence 999994
No 204
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.24 E-value=5.2e-07 Score=88.84 Aligned_cols=99 Identities=12% Similarity=0.148 Sum_probs=75.0
Q ss_pred CCCeEEEecCcccHHHHHHhhh---cCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH--HhhCC-Cc
Q 047386 121 KPPRVLEALSASGLRALRYARE---VEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY--MLTHP-KE 194 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E---~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~--l~~~~-~~ 194 (581)
.+.+|||+-||||..++.+++. +....+|+++|+|+.+++.++ ++. .+++++++|+..+ +.... ..
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~--~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDM--ENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGC--TTEEEEECCSSCSGGGGGGSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccC--CceEEEECcchhHHHHHhhccCC
Confidence 3569999999999999999875 222468999999999988776 222 4789999999875 33222 36
Q ss_pred ccEEeeCCC-CCChHhHHHHHH-hccCCCeEEEEe
Q 047386 195 FDVVDLDPY-GSPSVFLDSAIQ-SVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPy-Gs~~~fld~A~~-~l~~gGlL~vTa 227 (581)
||+|++|-. .....++..+.+ .|++||+|++..
T Consensus 153 fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d 187 (236)
T 2bm8_A 153 HPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIED 187 (236)
T ss_dssp SSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECS
T ss_pred CCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEe
Confidence 999999873 223356676775 999999999964
No 205
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.24 E-value=1.2e-06 Score=100.64 Aligned_cols=109 Identities=18% Similarity=0.165 Sum_probs=79.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCC--ccEEEEEeCCHHHHHHH--HHHHHHhCCCC-CCcEEEEehhHHHHHhhCCCcc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEG--IGQVVALDNDKASVEAC--RRNIKFNGSVA-CSKVESHLADARVYMLTHPKEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~G--a~~V~anD~s~~Ave~i--~~Ni~~N~~~~-~~~v~v~~~DA~~~l~~~~~~f 195 (581)
.+.+|||++||||.+.+.++..++. ...++++|+|+.+++++ +.|+..|++.. .....+...|....-.....+|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 3669999999999999999987532 24699999999999999 88988765531 1123455666554211123579
Q ss_pred cEEeeCC-CCCC--------------------------------hHhHHHHHHhccCCCeEEEEecc
Q 047386 196 DVVDLDP-YGSP--------------------------------SVFLDSAIQSVADGGMLMCTATD 229 (581)
Q Consensus 196 DvIdLDP-yGs~--------------------------------~~fld~A~~~l~~gGlL~vTaTD 229 (581)
|+|+.+| |+.. ..|+..+++.|++||.+++-..+
T Consensus 401 DVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 401 SVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp EEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 9999998 6431 13677889999999998886533
No 206
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.24 E-value=7.5e-07 Score=89.56 Aligned_cols=102 Identities=18% Similarity=0.217 Sum_probs=80.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. |. .|+++|+|+.+++.+++++..+++....+++++++|+..+-. ...||+|++.
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~--~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~fD~v~~~ 157 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL--GW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL--DKRFGTVVIS 157 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT--TC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--SCCEEEEEEC
T ss_pred CCcEEEEeccCCHHHHHHHHc--CC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--CCCcCEEEEC
Confidence 348999999999999999985 54 699999999999999999997763111368999999877532 4689988754
Q ss_pred C----CCCC---hHhHHHHHHhccCCCeEEEEec
Q 047386 202 P----YGSP---SVFLDSAIQSVADGGMLMCTAT 228 (581)
Q Consensus 202 P----yGs~---~~fld~A~~~l~~gGlL~vTaT 228 (581)
. +-.+ ..++..+.+.|++||.|+++.-
T Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 191 (299)
T 3g2m_A 158 SGSINELDEADRRGLYASVREHLEPGGKFLLSLA 191 (299)
T ss_dssp HHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCcEEEEEee
Confidence 2 2221 4677888899999999999863
No 207
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.23 E-value=3.9e-07 Score=87.17 Aligned_cols=100 Identities=13% Similarity=0.029 Sum_probs=71.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhC----------CCCCCcEEEEehhHHHHHhhC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNG----------SVACSKVESHLADARVYMLTH 191 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~----------~~~~~~v~v~~~DA~~~l~~~ 191 (581)
+.+|||+.||+|..++.++.. |. +|+++|+|+.+++.++++...+. .. ..++++.++|+..+-...
T Consensus 23 ~~~vLD~GCG~G~~~~~la~~--g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~d~~~l~~~~ 98 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSGQ--GY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYA-APGIEIWCGDFFALTARD 98 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHHH--CC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEE-CSSSEEEEECCSSSTHHH
T ss_pred CCEEEEeCCCCcHhHHHHHHC--CC-eEEEEeCCHHHHHHHHHHccCCccccccccccccc-CCccEEEECccccCCccc
Confidence 568999999999999999885 65 79999999999999998765310 00 136789999987654321
Q ss_pred CCcccEEeeC-CCC-CC----hHhHHHHHHhccCCCeEEE
Q 047386 192 PKEFDVVDLD-PYG-SP----SVFLDSAIQSVADGGMLMC 225 (581)
Q Consensus 192 ~~~fDvIdLD-PyG-s~----~~fld~A~~~l~~gGlL~v 225 (581)
...||+|..- .+. .+ ..++....+.|++||.+++
T Consensus 99 ~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 99 IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 1479999731 221 11 2366777889999997433
No 208
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.22 E-value=1.8e-06 Score=83.93 Aligned_cols=95 Identities=12% Similarity=0.145 Sum_probs=76.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...++ .+|+++|+|+.+++.++++ . .++++.++|+..+. ....||+|+..
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~~D~s~~~~~~a~~~-----~---~~~~~~~~d~~~~~--~~~~fD~v~~~ 102 (259)
T 2p35_A 34 VLNGYDLGCGPGNSTELLTDRYGV-NVITGIDSDDDMLEKAADR-----L---PNTNFGKADLATWK--PAQKADLLYAN 102 (259)
T ss_dssp CSSEEEETCTTTHHHHHHHHHHCT-TSEEEEESCHHHHHHHHHH-----S---TTSEEEECCTTTCC--CSSCEEEEEEE
T ss_pred CCEEEEecCcCCHHHHHHHHhCCC-CEEEEEECCHHHHHHHHHh-----C---CCcEEEECChhhcC--ccCCcCEEEEe
Confidence 568999999999999999987655 4699999999999999988 1 24688999987654 34679999875
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
. + ..+..++..+.+.|++||.|+++.
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 103 AVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp SCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 4 2 234567888889999999999975
No 209
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.19 E-value=1.6e-06 Score=87.92 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=79.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCC----CCCcEEEEehhHHHHH-----hhCC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSV----ACSKVESHLADARVYM-----LTHP 192 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~----~~~~v~v~~~DA~~~l-----~~~~ 192 (581)
+.+|||+-||+|..+..++.. +...|+++|+|+.+++.+++++..++.. ...+++++++|+..+. ....
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 458999999999999999873 5678999999999999999999876310 0136899999998763 1112
Q ss_pred CcccEEeeCC-C--C--C---ChHhHHHHHHhccCCCeEEEEe
Q 047386 193 KEFDVVDLDP-Y--G--S---PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 193 ~~fDvIdLDP-y--G--s---~~~fld~A~~~l~~gGlL~vTa 227 (581)
..||+|+..- . . . +..++..+.++|++||+|+++.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 155 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTT 155 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 4799998643 1 1 1 1357777788999999999985
No 210
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.19 E-value=7.8e-06 Score=83.62 Aligned_cols=110 Identities=18% Similarity=0.167 Sum_probs=77.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCC---cEEEEehhH------HHHHhh-C
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACS---KVESHLADA------RVYMLT-H 191 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~---~v~v~~~DA------~~~l~~-~ 191 (581)
+.+|||+-||+|.....++.. +...|+++|+|+.+++.+++.....+..... .+++.+.|+ ..+... .
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 568999999999877777763 5678999999999999999988766542000 245556655 333211 2
Q ss_pred CCcccEEee--------CCCCCChHhHHHHHHhccCCCeEEEEeccchhhc
Q 047386 192 PKEFDVVDL--------DPYGSPSVFLDSAIQSVADGGMLMCTATDMAVLC 234 (581)
Q Consensus 192 ~~~fDvIdL--------DPyGs~~~fld~A~~~l~~gGlL~vTaTD~a~Lc 234 (581)
...||+|.. ++.. ...++..+.++|++||+|+++..+...+.
T Consensus 127 ~~~FD~V~~~~~lhy~~~~~~-~~~~l~~~~r~LkpGG~~i~~~~~~~~~~ 176 (302)
T 2vdw_A 127 FGKFNIIDWQFAIHYSFHPRH-YATVMNNLSELTASGGKVLITTMDGDKLS 176 (302)
T ss_dssp SSCEEEEEEESCGGGTCSTTT-HHHHHHHHHHHEEEEEEEEEEEECHHHHT
T ss_pred CCCeeEEEECchHHHhCCHHH-HHHHHHHHHHHcCCCCEEEEEeCCHHHHH
Confidence 358999963 3321 24678888899999999999876555544
No 211
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.18 E-value=1.6e-06 Score=82.65 Aligned_cols=100 Identities=20% Similarity=0.186 Sum_probs=74.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHH----HHhCCCCCCcEEEEehhHHHHHhhCCCcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNI----KFNGSVACSKVESHLADARVYMLTHPKEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni----~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDv 197 (581)
+.+|||+.||+|..++.++...++ .+|+++|+|+.+++.+.+++ ..+++ .++++.++|+..+-. .... |.
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~p~-~~v~gvD~s~~~l~~~~~~a~~~~~~~~~---~~v~~~~~d~~~l~~-~~~~-d~ 101 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQNPS-RLVVALDADKSRMEKISAKAAAKPAKGGL---PNLLYLWATAERLPP-LSGV-GE 101 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHCTT-EEEEEEESCGGGGHHHHHHHTSCGGGTCC---TTEEEEECCSTTCCS-CCCE-EE
T ss_pred CCEEEEecCCCCHHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhhhhcCC---CceEEEecchhhCCC-CCCC-CE
Confidence 568999999999999999997444 57999999999777654444 34555 368999999977432 2233 77
Q ss_pred EeeCC-CCC--------ChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDP-YGS--------PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDP-yGs--------~~~fld~A~~~l~~gGlL~vTa 227 (581)
|++.. +.. +..++..+.+.|++||.|+++.
T Consensus 102 v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVAL 140 (218)
T ss_dssp EEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEE
T ss_pred EEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEe
Confidence 77554 221 2567888889999999999964
No 212
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.17 E-value=1.1e-06 Score=85.36 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=78.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++... | .+|+++|+|+.+++.+++++..+ .+++++++|+..+-. ....||+|+..
T Consensus 56 ~~~vLdiG~G~G~~~~~l~~~~-~-~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~-~~~~fD~v~~~ 127 (266)
T 3ujc_A 56 NSKVLDIGSGLGGGCMYINEKY-G-AHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTKEF-PENNFDLIYSR 127 (266)
T ss_dssp TCEEEEETCTTSHHHHHHHHHH-C-CEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTCCC-CTTCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccCCC-CCCcEEEEeHH
Confidence 5699999999999999999864 4 48999999999999999887644 368999999876521 24689999876
Q ss_pred C-C-----CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-----GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-----Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.+.|++||.|+++.
T Consensus 128 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~ 159 (266)
T 3ujc_A 128 DAILALSLENKNKLFQKCYKWLKPTGTLLITD 159 (266)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhcChHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 2 123457788889999999999975
No 213
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.17 E-value=2.7e-06 Score=82.67 Aligned_cols=97 Identities=29% Similarity=0.273 Sum_probs=77.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. | .+|+++|+|+.+++.+++++ ..+. .++.+.++|+..+- .....||+|++.
T Consensus 40 ~~~vLDiG~G~G~~~~~l~~~--~-~~v~~vD~s~~~~~~a~~~~-~~~~---~~~~~~~~d~~~~~-~~~~~fD~v~~~ 111 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIAR--G-YRYIALDADAAMLEVFRQKI-AGVD---RKVQVVQADARAIP-LPDESVHGVIVV 111 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHTT--T-CEEEEEESCHHHHHHHHHHT-TTSC---TTEEEEESCTTSCC-SCTTCEEEEEEE
T ss_pred CCEEEEeCCcCCHHHHHHHHC--C-CEEEEEECCHHHHHHHHHHh-hccC---CceEEEEcccccCC-CCCCCeeEEEEC
Confidence 568999999999999999984 4 47999999999999999998 3332 46899999986542 123579999875
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEE
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vT 226 (581)
- + ..+..++..+.+.|++||.|+++
T Consensus 112 ~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 112 HLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp SCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred CchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 3 2 22356888889999999999987
No 214
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.17 E-value=2.6e-07 Score=89.99 Aligned_cols=105 Identities=12% Similarity=0.045 Sum_probs=78.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC--------------------------C
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA--------------------------C 174 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~--------------------------~ 174 (581)
.+.+|||+-||+|..++.++.. |..+|+++|+|+.+++.+++++..++... .
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 133 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACE--SFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLR 133 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhc--ccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhh
Confidence 4568999999999999998874 66789999999999999999987543100 0
Q ss_pred CcE-EEEehhHHHHHhhCC---CcccEEeeCC-C-----C--CChHhHHHHHHhccCCCeEEEEe
Q 047386 175 SKV-ESHLADARVYMLTHP---KEFDVVDLDP-Y-----G--SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 175 ~~v-~v~~~DA~~~l~~~~---~~fDvIdLDP-y-----G--s~~~fld~A~~~l~~gGlL~vTa 227 (581)
.++ .+.++|+........ ..||+|+.-- . . .+..++..+.++|++||+|+++.
T Consensus 134 ~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~ 198 (265)
T 2i62_A 134 RAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVD 198 (265)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEe
Confidence 126 888999876532112 6799997632 1 1 13456777888999999999875
No 215
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.16 E-value=4e-06 Score=82.51 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=76.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCc-cEEEEEeCCHH------HHHHHHHHHHHhCCCCCCcEEEEehh-HHHH-HhhCC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGI-GQVVALDNDKA------SVEACRRNIKFNGSVACSKVESHLAD-ARVY-MLTHP 192 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga-~~V~anD~s~~------Ave~i~~Ni~~N~~~~~~~v~v~~~D-A~~~-l~~~~ 192 (581)
+.+|||+-||+|..++.++... |. .+|+++|+|+. +++.+++|+..+++. .++++.++| .... +....
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~~~-g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~ 120 (275)
T 3bkx_A 44 GEKILEIGCGQGDLSAVLADQV-GSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLG--DRLTVHFNTNLSDDLGPIAD 120 (275)
T ss_dssp TCEEEEESCTTSHHHHHHHHHH-CTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTG--GGEEEECSCCTTTCCGGGTT
T ss_pred CCEEEEeCCCCCHHHHHHHHHh-CCCCEEEEEECCccccccHHHHHHHHHHHHhcCCC--CceEEEECChhhhccCCCCC
Confidence 5689999999999999999864 22 58999999997 999999999988875 579999998 2111 11123
Q ss_pred CcccEEeeCC-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 193 KEFDVVDLDP-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 193 ~~fDvIdLDP-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
..||+|++.. + ..+..++...-.++++||.|+++.
T Consensus 121 ~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~ 159 (275)
T 3bkx_A 121 QHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAE 159 (275)
T ss_dssp CCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 6799998765 2 233445554444555699999875
No 216
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.15 E-value=3.8e-07 Score=90.53 Aligned_cols=105 Identities=13% Similarity=0.006 Sum_probs=74.2
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCC--------------------------C
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVA--------------------------C 174 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~--------------------------~ 174 (581)
.+.+|||+-||+|+.++.++. .|+.+|+++|+|+.+++.++++++.+...- .
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~--~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAAC--DSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGG--GTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHH--hhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 466899999999999888776 488899999999999999999987652100 0
Q ss_pred CcEE-EEehhHHHHHhh---CCCcccEEeeC-------CC-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 175 SKVE-SHLADARVYMLT---HPKEFDVVDLD-------PY-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 175 ~~v~-v~~~DA~~~l~~---~~~~fDvIdLD-------Py-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.+++ ++++|+...... ....||+|..= |. ......+....++|++||.|+++.
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~ 197 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTV 197 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 1233 778887653210 13479999752 11 111245666678999999999974
No 217
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.15 E-value=1.5e-06 Score=85.22 Aligned_cols=92 Identities=20% Similarity=0.255 Sum_probs=74.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. | ..|+++|+|+.+++.+++++. +++++++|+..+-. ...||+|++.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~~--~-~~v~gvD~s~~~~~~a~~~~~--------~~~~~~~d~~~~~~--~~~fD~v~~~ 117 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLADS--F-GTVEGLELSADMLAIARRRNP--------DAVLHHGDMRDFSL--GRRFSAVTCM 117 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTTT--S-SEEEEEESCHHHHHHHHHHCT--------TSEEEECCTTTCCC--SCCEEEEEEC
T ss_pred CCcEEEeCCcCCHHHHHHHHc--C-CeEEEEECCHHHHHHHHhhCC--------CCEEEECChHHCCc--cCCcCEEEEc
Confidence 468999999999999999984 5 479999999999999998854 35788999876543 4689999986
Q ss_pred C--CC---C---ChHhHHHHHHhccCCCeEEEE
Q 047386 202 P--YG---S---PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 202 P--yG---s---~~~fld~A~~~l~~gGlL~vT 226 (581)
. +. . ...++..+.++|++||.|+++
T Consensus 118 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~ 150 (263)
T 3pfg_A 118 FSSIGHLAGQAELDAALERFAAHVLPDGVVVVE 150 (263)
T ss_dssp TTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 3 21 1 125677788999999999996
No 218
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.14 E-value=5.1e-06 Score=84.36 Aligned_cols=101 Identities=18% Similarity=0.258 Sum_probs=81.3
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++...++. +|+++|++ .+++.+++|+..+++. +++++..+|+... .....||+|++
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~~-~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~--~~~~~~D~v~~ 238 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNA-EIFGVDWA-SVLEVAKENARIQGVA--SRYHTIAGSAFEV--DYGNDYDLVLL 238 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTC-EEEEEECH-HHHHHHHHHHHHHTCG--GGEEEEESCTTTS--CCCSCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCC-eEEEEecH-HHHHHHHHHHHhcCCC--cceEEEecccccC--CCCCCCcEEEE
Confidence 35699999999999999999876554 79999999 9999999999999985 5799999998754 12345999988
Q ss_pred -CCC-CC--C--hHhHHHHHHhccCCCeEEEEe
Q 047386 201 -DPY-GS--P--SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 -DPy-Gs--~--~~fld~A~~~l~~gGlL~vTa 227 (581)
+.+ .. + ..++..+.++|++||.|++..
T Consensus 239 ~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 271 (335)
T 2r3s_A 239 PNFLHHFDVATCEQLLRKIKTALAVEGKVIVFD 271 (335)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhccCCHHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 442 12 1 367777889999999877764
No 219
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.13 E-value=2.5e-06 Score=86.20 Aligned_cols=98 Identities=11% Similarity=0.009 Sum_probs=69.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+.||||..++.++.. | .+|+++|+|+.+++.+++|+..+.+ .+.+...+.. ........||+|+.
T Consensus 45 ~g~~VLDlGcGtG~~a~~La~~--g-~~V~gvD~S~~ml~~Ar~~~~~~~v----~~~~~~~~~~-~~~~~~~~fD~Vv~ 116 (261)
T 3iv6_A 45 PGSTVAVIGASTRFLIEKALER--G-ASVTVFDFSQRMCDDLAEALADRCV----TIDLLDITAE-IPKELAGHFDFVLN 116 (261)
T ss_dssp TTCEEEEECTTCHHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHTSSSCC----EEEECCTTSC-CCGGGTTCCSEEEE
T ss_pred CcCEEEEEeCcchHHHHHHHhc--C-CEEEEEECCHHHHHHHHHHHHhccc----eeeeeecccc-cccccCCCccEEEE
Confidence 3569999999999999999984 5 4799999999999999999876522 2233222220 00111357999999
Q ss_pred CCCC--CC----hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DPYG--SP----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DPyG--s~----~~fld~A~~~l~~gGlL~vTa 227 (581)
+..- .+ ..++....++| +||.|++++
T Consensus 117 ~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~ 148 (261)
T 3iv6_A 117 DRLINRFTTEEARRACLGMLSLV-GSGTVRASV 148 (261)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEE
T ss_pred hhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEe
Confidence 8721 11 13555566788 999999986
No 220
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.12 E-value=5e-06 Score=80.55 Aligned_cols=97 Identities=11% Similarity=0.088 Sum_probs=75.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC----CCcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH----PKEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~----~~~fDv 197 (581)
+.+|||+-||+|..++.++.. +. +|+++|+|+.+++.+++|+. . .+++++++|+..+-... ...||+
T Consensus 57 ~~~vLD~GcG~G~~~~~la~~--~~-~v~gvD~s~~~~~~a~~~~~---~---~~~~~~~~d~~~~~~~~~~~~~~~~d~ 127 (245)
T 3ggd_A 57 ELPLIDFACGNGTQTKFLSQF--FP-RVIGLDVSKSALEIAAKENT---A---ANISYRLLDGLVPEQAAQIHSEIGDAN 127 (245)
T ss_dssp TSCEEEETCTTSHHHHHHHHH--SS-CEEEEESCHHHHHHHHHHSC---C---TTEEEEECCTTCHHHHHHHHHHHCSCE
T ss_pred CCeEEEEcCCCCHHHHHHHHh--CC-CEEEEECCHHHHHHHHHhCc---c---cCceEEECcccccccccccccccCccE
Confidence 468999999999999999986 44 79999999999999999872 1 36889999987643221 124899
Q ss_pred EeeCC-CC-C----ChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDP-YG-S----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDP-yG-s----~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+..- +. . ...++..+.+.|++||.|++..
T Consensus 128 v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 128 IYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIE 163 (245)
T ss_dssp EEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEe
Confidence 98775 21 1 2367888889999999877764
No 221
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.11 E-value=3.4e-06 Score=75.85 Aligned_cols=92 Identities=22% Similarity=0.187 Sum_probs=69.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH-----h--hCCCc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM-----L--THPKE 194 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l-----~--~~~~~ 194 (581)
+.+|||+.||+|..++.+++..+.-.+|+++|+|+ .++. .++++.++|+...- . .....
T Consensus 23 ~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-------------~~~~~~~~d~~~~~~~~~~~~~~~~~~ 88 (180)
T 1ej0_A 23 GMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-------------VGVDFLQGDFRDELVMKALLERVGDSK 88 (180)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------TTEEEEESCTTSHHHHHHHHHHHTTCC
T ss_pred CCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------CcEEEEEcccccchhhhhhhccCCCCc
Confidence 45899999999999999998642126899999999 5432 25788899986552 1 12357
Q ss_pred ccEEeeCCC--CC--C-----------hHhHHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLDPY--GS--P-----------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPy--Gs--~-----------~~fld~A~~~l~~gGlL~vTa 227 (581)
||+|+.|+. .. . ..++..+.+.|++||.|+++.
T Consensus 89 ~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 89 VQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp EEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 999999973 21 2 467788889999999999864
No 222
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.09 E-value=2.8e-06 Score=86.76 Aligned_cols=81 Identities=20% Similarity=0.241 Sum_probs=62.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|.+++.++.. ..+|+++|+|+.+++.+++|+..+++ .+++++++|+..+. ...||+|+.|
T Consensus 43 ~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~---~~v~~~~~D~~~~~---~~~~D~Vv~n 113 (299)
T 2h1r_A 43 SDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY---NNLEVYEGDAIKTV---FPKFDVCTAN 113 (299)
T ss_dssp TCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC---CCEEC----CCSSC---CCCCSEEEEE
T ss_pred cCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC---CceEEEECchhhCC---cccCCEEEEc
Confidence 568999999999999999974 35899999999999999999998887 36899999986543 2479999999
Q ss_pred C-CCCChHhHH
Q 047386 202 P-YGSPSVFLD 211 (581)
Q Consensus 202 P-yGs~~~fld 211 (581)
| |....+.+.
T Consensus 114 ~py~~~~~~~~ 124 (299)
T 2h1r_A 114 IPYKISSPLIF 124 (299)
T ss_dssp CCGGGHHHHHH
T ss_pred CCcccccHHHH
Confidence 7 443344443
No 223
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.08 E-value=8.6e-06 Score=84.24 Aligned_cols=99 Identities=19% Similarity=0.178 Sum_probs=80.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...+++ +++++|+ +.+++.+++|+..+++. +++++.++|+...+ ...||+|++.
T Consensus 183 ~~~vlDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~---~~~~D~v~~~ 255 (374)
T 1qzz_A 183 VRHVLDVGGGNGGMLAAIALRAPHL-RGTLVEL-AGPAERARRRFADAGLA--DRVTVAEGDFFKPL---PVTADVVLLS 255 (374)
T ss_dssp CCEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTSCC---SCCEEEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCC-EEEEEeC-HHHHHHHHHHHHhcCCC--CceEEEeCCCCCcC---CCCCCEEEEe
Confidence 5699999999999999999876544 7999999 99999999999999985 58999999986533 3359999876
Q ss_pred C-C-CCC----hHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GSP----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs~----~~fld~A~~~l~~gGlL~vTa 227 (581)
. + ..+ ..++..+.++|++||.|++..
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRALEPGGRLLVLD 287 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 4 1 112 257888889999999888764
No 224
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.08 E-value=4.1e-06 Score=79.16 Aligned_cols=92 Identities=22% Similarity=0.154 Sum_probs=72.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..+..+ |..+|+++|+|+.+++.+++++ . ++.+.++|+..+- .....||+|++.
T Consensus 37 ~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~--~------~~~~~~~d~~~~~-~~~~~fD~v~~~ 102 (211)
T 2gs9_A 37 GESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA--P------EATWVRAWGEALP-FPGESFDVVLLF 102 (211)
T ss_dssp CSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC--T------TSEEECCCTTSCC-SCSSCEEEEEEE
T ss_pred CCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC--C------CcEEEEcccccCC-CCCCcEEEEEEc
Confidence 568999999999988765 4558999999999999999887 2 3578888876542 123579999875
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.+.|++||.|+++.
T Consensus 103 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 132 (211)
T 2gs9_A 103 TTLEFVEDVERVLLEARRVLRPGGALVVGV 132 (211)
T ss_dssp SCTTTCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 4 2 234578888899999999999975
No 225
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.07 E-value=1.9e-06 Score=84.30 Aligned_cols=101 Identities=11% Similarity=0.070 Sum_probs=74.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHH----HHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASV----EACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Av----e~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDv 197 (581)
+.+|||+-||+|..++.++...++ ..|+++|+|+.++ +.+++|++.+++. ++++.++|+..+-......+|.
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~~~-~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~---~v~~~~~d~~~l~~~~~d~v~~ 100 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAINDQN-TFYIGIDPVKENLFDISKKIIKKPSKGGLS---NVVFVIAAAESLPFELKNIADS 100 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTCTT-EEEEEECSCCGGGHHHHHHHTSCGGGTCCS---SEEEECCBTTBCCGGGTTCEEE
T ss_pred CCEEEEEeccCcHHHHHHHHhCCC-CEEEEEeCCHHHHHHHHHHHHHHHHHcCCC---CeEEEEcCHHHhhhhccCeEEE
Confidence 558999999999999999965344 5799999996665 5559999888874 6899999987662111134555
Q ss_pred EeeCC-CCC--------ChHhHHHHHHhccCCCeEEEE
Q 047386 198 VDLDP-YGS--------PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 198 IdLDP-yGs--------~~~fld~A~~~l~~gGlL~vT 226 (581)
|.+.+ +.. ...++....+.|++||.|++.
T Consensus 101 i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~ 138 (225)
T 3p2e_A 101 ISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFV 138 (225)
T ss_dssp EEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEE
T ss_pred EEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEE
Confidence 55543 221 234677778899999999983
No 226
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.06 E-value=2.2e-06 Score=82.13 Aligned_cols=92 Identities=15% Similarity=0.274 Sum_probs=72.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe-e
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD-L 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId-L 200 (581)
+.+|||+.||+|..++.++.. +. +|+++|+|+.+++.+++++. +++++++|+..+.. ...||+|+ +
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~--~~-~v~~~D~s~~~~~~a~~~~~--------~~~~~~~d~~~~~~--~~~~D~v~~~ 107 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKE--FG-DTAGLELSEDMLTHARKRLP--------DATLHQGDMRDFRL--GRKFSAVVSM 107 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHH--HS-EEEEEESCHHHHHHHHHHCT--------TCEEEECCTTTCCC--SSCEEEEEEC
T ss_pred CCeEEEecccCCHHHHHHHHh--CC-cEEEEeCCHHHHHHHHHhCC--------CCEEEECCHHHccc--CCCCcEEEEc
Confidence 458999999999999999985 33 89999999999999988741 36788999876532 45799999 2
Q ss_pred -CCC--C-C---ChHhHHHHHHhccCCCeEEEE
Q 047386 201 -DPY--G-S---PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 201 -DPy--G-s---~~~fld~A~~~l~~gGlL~vT 226 (581)
+.+ - . ...++..+.+.|++||.|+++
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVE 140 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 332 1 1 135777888999999999986
No 227
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.00 E-value=1.1e-05 Score=83.25 Aligned_cols=99 Identities=20% Similarity=0.257 Sum_probs=80.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...+++ .++.+|+ +.+++.+++|+..+++. ++++++.+|+...+ ...||+|++.
T Consensus 184 ~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~---~~~~D~v~~~ 256 (360)
T 1tw3_A 184 VRHVLDVGGGKGGFAAAIARRAPHV-SATVLEM-AGTVDTARSYLKDEGLS--DRVDVVEGDFFEPL---PRKADAIILS 256 (360)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-TTHHHHHHHHHHHTTCT--TTEEEEECCTTSCC---SSCEEEEEEE
T ss_pred CcEEEEeCCcCcHHHHHHHHhCCCC-EEEEecC-HHHHHHHHHHHHhcCCC--CceEEEeCCCCCCC---CCCccEEEEc
Confidence 5699999999999999999876554 7899999 99999999999999985 58999999986533 3359999875
Q ss_pred C-C-CCC----hHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GSP----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs~----~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+ ..++..+.++|++||.|++.-
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 288 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPGGRILIHE 288 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 4 2 112 257888889999999888764
No 228
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.99 E-value=7.2e-06 Score=92.36 Aligned_cols=97 Identities=22% Similarity=0.274 Sum_probs=77.7
Q ss_pred CCCeEEEecCcccHH---HHHHhhhcCCcc--EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcc
Q 047386 121 KPPRVLEALSASGLR---ALRYAREVEGIG--QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~r---gIr~a~E~~Ga~--~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~f 195 (581)
.+..|||+-||+|++ +++|+.+ ++. +|+|+|.|+.|. .++++++.|+.. ++|+++++|+..+- .++++
T Consensus 357 ~~~vVldVGaGrGpLv~~al~A~a~--~~~~vkVyAVEknp~A~-~a~~~v~~N~~~--dkVtVI~gd~eev~--LPEKV 429 (637)
T 4gqb_A 357 NVQVLMVLGAGRGPLVNASLRAAKQ--ADRRIKLYAVEKNPNAV-VTLENWQFEEWG--SQVTVVSSDMREWV--APEKA 429 (637)
T ss_dssp CEEEEEEESCTTSHHHHHHHHHHHH--TTCEEEEEEEESCHHHH-HHHHHHHHHTTG--GGEEEEESCTTTCC--CSSCE
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHh--cCCCcEEEEEECCHHHH-HHHHHHHhccCC--CeEEEEeCcceecc--CCccc
Confidence 455899999999999 7777665 333 689999999877 567889999997 79999999998773 36799
Q ss_pred cEEeeCCCCCC------hHhHHHHHHhccCCCeEE
Q 047386 196 DVVDLDPYGSP------SVFLDSAIQSVADGGMLM 224 (581)
Q Consensus 196 DvIdLDPyGs~------~~fld~A~~~l~~gGlL~ 224 (581)
|||+-...|+- -..|+++-+.|++||+++
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 99998886651 145677778999999864
No 229
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.97 E-value=8.5e-06 Score=77.70 Aligned_cols=89 Identities=16% Similarity=0.090 Sum_probs=64.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH-----hh-CC---
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM-----LT-HP--- 192 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l-----~~-~~--- 192 (581)
+.+|||+.||+|.+++.++.. ...|+++|+++.+ .+ .+++++++|+...- .. ..
T Consensus 26 g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~---~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 26 GDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI---AGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp TCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC---TTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC---CCeEEEEccccCHHHHHHHHHHhhccc
Confidence 569999999999999999985 4589999999852 22 35789999975421 10 01
Q ss_pred -CcccEEeeCCC--CCCh-------------HhHHHHHHhccCCCeEEEEe
Q 047386 193 -KEFDVVDLDPY--GSPS-------------VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 193 -~~fDvIdLDPy--Gs~~-------------~fld~A~~~l~~gGlL~vTa 227 (581)
..||+|..|+. .+.. ..++.|.+.|++||.|++..
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 38999999973 2211 23455678999999998764
No 230
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.94 E-value=7.9e-06 Score=82.74 Aligned_cols=86 Identities=20% Similarity=0.164 Sum_probs=69.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|.+++.++.. + .+|+++|+|+.+++.+++|+..+++. .+++++++|+..+- -..||+|+.+
T Consensus 29 ~~~VLDiG~G~G~lt~~L~~~--~-~~v~~vD~~~~~~~~a~~~~~~~~~~--~~v~~~~~D~~~~~---~~~fD~vv~n 100 (285)
T 1zq9_A 29 TDVVLEVGPGTGNMTVKLLEK--A-KKVVACELDPRLVAELHKRVQGTPVA--SKLQVLVGDVLKTD---LPFFDTCVAN 100 (285)
T ss_dssp TCEEEEECCTTSTTHHHHHHH--S-SEEEEEESCHHHHHHHHHHHTTSTTG--GGEEEEESCTTTSC---CCCCSEEEEE
T ss_pred CCEEEEEcCcccHHHHHHHhh--C-CEEEEEECCHHHHHHHHHHHHhcCCC--CceEEEEcceeccc---chhhcEEEEe
Confidence 558999999999999999985 4 48999999999999999999877764 47999999997642 1379999999
Q ss_pred C-CCCChHhHHHHHH
Q 047386 202 P-YGSPSVFLDSAIQ 215 (581)
Q Consensus 202 P-yGs~~~fld~A~~ 215 (581)
+ |....+.+...+.
T Consensus 101 lpy~~~~~~~~~~l~ 115 (285)
T 1zq9_A 101 LPYQISSPFVFKLLL 115 (285)
T ss_dssp CCGGGHHHHHHHHHH
T ss_pred cCcccchHHHHHHHh
Confidence 6 5545566555444
No 231
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.93 E-value=1.2e-05 Score=79.30 Aligned_cols=138 Identities=15% Similarity=0.082 Sum_probs=85.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEE-ehhHHHHH-hhCCC-cccE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESH-LADARVYM-LTHPK-EFDV 197 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~-~~DA~~~l-~~~~~-~fDv 197 (581)
.+.+|||+-||||.+++.++.. |+.+|+++|+|+.+++..++|... +... ..++..+. ..... .||.
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~d~ 106 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDER--------VVVMEQFNFRNAVLADFEQGRPSF 106 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTT--------EEEECSCCGGGCCGGGCCSCCCSE
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCcc--------ccccccceEEEeCHhHcCcCCCCE
Confidence 4669999999999999999984 888999999999999886665321 2211 11221111 11122 3677
Q ss_pred EeeCC-CCCChHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccCc-cCCCccchhhhHHHHHHHHHHHHHHcC
Q 047386 198 VDLDP-YGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGSY-PLRGKYCHEMALRILLACIESHANRYK 275 (581)
Q Consensus 198 IdLDP-yGs~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~-~~k~~~~hE~~lRill~~i~~~Aa~~~ 275 (581)
+..|- |.+...++..+.+.|++||.|++.. ...-+.....+|.. .++.+..|.. .+..+...+.+.|
T Consensus 107 ~~~D~v~~~l~~~l~~i~rvLkpgG~lv~~~-------~p~~e~~~~~~~~~G~~~d~~~~~~----~~~~l~~~l~~aG 175 (232)
T 3opn_A 107 TSIDVSFISLDLILPPLYEILEKNGEVAALI-------KPQFEAGREQVGKNGIIRDPKVHQM----TIEKVLKTATQLG 175 (232)
T ss_dssp EEECCSSSCGGGTHHHHHHHSCTTCEEEEEE-------CHHHHSCHHHHC-CCCCCCHHHHHH----HHHHHHHHHHHHT
T ss_pred EEEEEEhhhHHHHHHHHHHhccCCCEEEEEE-------CcccccCHHHhCcCCeecCcchhHH----HHHHHHHHHHHCC
Confidence 77776 6666788999999999999998853 11111222222211 2233444444 4455556666667
Q ss_pred CceE
Q 047386 276 RYIE 279 (581)
Q Consensus 276 r~i~ 279 (581)
..+.
T Consensus 176 f~v~ 179 (232)
T 3opn_A 176 FSVK 179 (232)
T ss_dssp EEEE
T ss_pred CEEE
Confidence 6654
No 232
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.92 E-value=7.1e-05 Score=86.41 Aligned_cols=102 Identities=6% Similarity=0.035 Sum_probs=77.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHh------CCCCCCcEEEEehhHHHHHhhCCCc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFN------GSVACSKVESHLADARVYMLTHPKE 194 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N------~~~~~~~v~v~~~DA~~~l~~~~~~ 194 (581)
.+.+|||+-||+|.+++.++...+...+|+++|+|+.+++.+++++... ++ .+++++++|+..+-. ....
T Consensus 721 ~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl---~nVefiqGDa~dLp~-~d~s 796 (950)
T 3htx_A 721 SASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV---KSATLYDGSILEFDS-RLHD 796 (950)
T ss_dssp CCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC---SEEEEEESCTTSCCT-TSCS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC---CceEEEECchHhCCc-ccCC
Confidence 5779999999999999999985212368999999999999999987753 33 479999999877543 2368
Q ss_pred ccEEeeCC-CC-CC--h--HhHHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLDP-YG-SP--S--VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDP-yG-s~--~--~fld~A~~~l~~gGlL~vTa 227 (581)
||+|++-- +. .+ . .|+..+.+.|++| +|+++.
T Consensus 797 FDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIIST 834 (950)
T 3htx_A 797 VDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVST 834 (950)
T ss_dssp CCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEE
T ss_pred eeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEe
Confidence 99998743 11 11 1 3677788999998 777764
No 233
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=97.92 E-value=1.2e-05 Score=79.81 Aligned_cols=94 Identities=23% Similarity=0.339 Sum_probs=75.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++. ++ ..|+++|+|+.+++.+++++ . ++.+.++|+..+-. ...||+|+.
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~--~~-~~v~gvD~s~~~~~~a~~~~--~------~~~~~~~d~~~~~~--~~~fD~v~~ 123 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ--SG-AEVLGTDNAATMIEKARQNY--P------HLHFDVADARNFRV--DKPLDAVFS 123 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH--TT-CEEEEEESCHHHHHHHHHHC--T------TSCEEECCTTTCCC--SSCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHh--CC-CeEEEEECCHHHHHHHHhhC--C------CCEEEECChhhCCc--CCCcCEEEE
Confidence 356999999999999999988 45 47999999999999998875 1 35678888876432 468999987
Q ss_pred CC-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.- + ..+..++..+.+.|++||.|+++.
T Consensus 124 ~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~ 154 (279)
T 3ccf_A 124 NAMLHWVKEPEAAIASIHQALKSGGRFVAEF 154 (279)
T ss_dssp ESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cchhhhCcCHHHHHHHHHHhcCCCcEEEEEe
Confidence 64 2 234578888899999999999874
No 234
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.91 E-value=1.7e-05 Score=73.84 Aligned_cols=92 Identities=21% Similarity=0.161 Sum_probs=65.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCc--------cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEE-ehhHHHHH----
Q 047386 122 PPRVLEALSASGLRALRYAREVEGI--------GQVVALDNDKASVEACRRNIKFNGSVACSKVESH-LADARVYM---- 188 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga--------~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~-~~DA~~~l---- 188 (581)
+.+|||+.||+|..++.+++..+.. .+|+++|+|+.+ .+ .+++++ ++|+...-
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~---~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL---EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC---TTCEEECSCCTTSHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC---CCCeEEEeccCCCHHHHHH
Confidence 5689999999999999999875321 689999999842 22 246778 88864321
Q ss_pred -h-hC-CCcccEEeeCC-CC---CC-----------hHhHHHHHHhccCCCeEEEEe
Q 047386 189 -L-TH-PKEFDVVDLDP-YG---SP-----------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 189 -~-~~-~~~fDvIdLDP-yG---s~-----------~~fld~A~~~l~~gGlL~vTa 227 (581)
. .. ...||+|+.|+ +. .. ..++..+.+.|++||.|+++.
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 1 11 24799999986 21 11 245667889999999999874
No 235
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=97.91 E-value=1.2e-05 Score=79.15 Aligned_cols=92 Identities=13% Similarity=0.019 Sum_probs=71.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++. +| .+|+++|+|+..++.++++. ++++.++|+..+- .....||+|+.-
T Consensus 35 ~~~vLDiGcG~G~~~~~l~~--~~-~~v~gvD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~~~~~fD~v~~~ 101 (261)
T 3ege_A 35 GSVIADIGAGTGGYSVALAN--QG-LFVYAVEPSIVMRQQAVVHP---------QVEWFTGYAENLA-LPDKSVDGVISI 101 (261)
T ss_dssp TCEEEEETCTTSHHHHHHHT--TT-CEEEEECSCHHHHHSSCCCT---------TEEEECCCTTSCC-SCTTCBSEEEEE
T ss_pred CCEEEEEcCcccHHHHHHHh--CC-CEEEEEeCCHHHHHHHHhcc---------CCEEEECchhhCC-CCCCCEeEEEEc
Confidence 56999999999999999997 56 48999999999888765544 4688999986532 224689999865
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.+.|+ ||.|.+..
T Consensus 102 ~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~ 130 (261)
T 3ege_A 102 LAIHHFSHLEKSFQEMQRIIR-DGTIVLLT 130 (261)
T ss_dssp SCGGGCSSHHHHHHHHHHHBC-SSCEEEEE
T ss_pred chHhhccCHHHHHHHHHHHhC-CcEEEEEE
Confidence 4 2 234578888999999 99666654
No 236
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.89 E-value=5.1e-05 Score=74.03 Aligned_cols=96 Identities=19% Similarity=0.095 Sum_probs=74.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCC--CCCCcEEEEehhHHHH------------
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGS--VACSKVESHLADARVY------------ 187 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~--~~~~~v~v~~~DA~~~------------ 187 (581)
..+|||.-+ |.=+|-+|+ .. ..+|+.+|.|++-.+.+++|++.+|+ . ++|+++.+||...
T Consensus 31 a~~VLEiGt--GySTl~lA~-~~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~--~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 31 AEVILEYGS--GGSTVVAAE-LP-GKHVTSVESDRAWARMMKAWLAANPPAEG--TEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp CSEEEEESC--SHHHHHHHT-ST-TCEEEEEESCHHHHHHHHHHHHHSCCCTT--CEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred CCEEEEECc--hHHHHHHHH-cC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCC--CceEEEEeCchhhhcccccccchhh
Confidence 458999875 666666666 23 47899999999999999999999997 5 6899999996432
Q ss_pred ------Hh---hC--CCcccEEeeCC-CCCChHhHHHHHHhccCCCeEEE
Q 047386 188 ------ML---TH--PKEFDVVDLDP-YGSPSVFLDSAIQSVADGGMLMC 225 (581)
Q Consensus 188 ------l~---~~--~~~fDvIdLDP-yGs~~~fld~A~~~l~~gGlL~v 225 (581)
.. .. ...||+|++|= +. ..++..++..|++||+|.+
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~k~--~~~~~~~l~~l~~GG~Iv~ 152 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGRFR--VGCALATAFSITRPVTLLF 152 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSSSH--HHHHHHHHHHCSSCEEEEE
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCCCc--hhHHHHHHHhcCCCeEEEE
Confidence 11 12 25799999995 33 3677778999999999955
No 237
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.88 E-value=2.4e-05 Score=83.02 Aligned_cols=104 Identities=16% Similarity=0.189 Sum_probs=79.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH-hC--CCC--CCcEEEEehhHHHHHhh---CCC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF-NG--SVA--CSKVESHLADARVYMLT---HPK 193 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~-N~--~~~--~~~v~v~~~DA~~~l~~---~~~ 193 (581)
+++||=+-.|.|...-+.++. + .++|+++|||+..++++++-+.. ++ .+. ..+++++.+||+.+|.. ..+
T Consensus 206 pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 206 GKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 569999999999988888875 3 58999999999999999986531 11 111 13689999999999964 346
Q ss_pred cccEEeeCCCC---C------C-----hHhHHHHHHhccCCCeEEEEe
Q 047386 194 EFDVVDLDPYG---S------P-----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 194 ~fDvIdLDPyG---s------~-----~~fld~A~~~l~~gGlL~vTa 227 (581)
+||+|++|.|. + + .+|++.+.++|++||++++-+
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 89999999531 1 1 257788889999999998764
No 238
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=97.88 E-value=1.5e-05 Score=81.23 Aligned_cols=98 Identities=16% Similarity=0.122 Sum_probs=79.9
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCC
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDP 202 (581)
.+|||+-||+|..++.++...++. +++++|+ +.+++.+++|+..+++. +++++..+|+..- ....||+|++--
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~---~~~~~D~v~~~~ 241 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSA-RGVMLDR-EGSLGVARDNLSSLLAG--ERVSLVGGDMLQE---VPSNGDIYLLSR 241 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTC-EEEEEEC-TTCTHHHHHHTHHHHHT--TSEEEEESCTTTC---CCSSCSEEEEES
T ss_pred CEEEEeCCCchHHHHHHHHHCCCC-EEEEeCc-HHHHHHHHHHHhhcCCC--CcEEEecCCCCCC---CCCCCCEEEEch
Confidence 699999999999999999876654 7999999 99999999999988775 5799999998763 235799998753
Q ss_pred -C---CCCh--HhHHHHHHhccCCCeEEEEe
Q 047386 203 -Y---GSPS--VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 203 -y---Gs~~--~fld~A~~~l~~gGlL~vTa 227 (581)
. ..+. .++..+.++|++||.|++.-
T Consensus 242 vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 242 IIGDLDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp CGGGCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred hccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 2 1122 67788889999999998874
No 239
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.88 E-value=1.6e-05 Score=90.09 Aligned_cols=100 Identities=12% Similarity=0.018 Sum_probs=76.6
Q ss_pred CCeEEEecCcccHHH---HHHhhhcC---------CccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh
Q 047386 122 PPRVLEALSASGLRA---LRYAREVE---------GIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML 189 (581)
Q Consensus 122 ~~~VLDafsgSG~rg---Ir~a~E~~---------Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~ 189 (581)
+..|||+-||||+++ ++++++.. .+.+|+|+|.|+.|+..+++... |++. ++|+++++|+..+-.
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~--d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWK--RRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTT--TCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCC--CeEEEEeCchhhccc
Confidence 358999999999996 55554321 13499999999999987776665 9996 689999999988743
Q ss_pred ----hCCCcccEEeeCCCCCC---h---HhHHHHHHhccCCCeEE
Q 047386 190 ----THPKEFDVVDLDPYGSP---S---VFLDSAIQSVADGGMLM 224 (581)
Q Consensus 190 ----~~~~~fDvIdLDPyGs~---~---~fld~A~~~l~~gGlL~ 224 (581)
...++.|+|+-..-|+- . ..|+++-+.|++||+++
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEE
Confidence 11468999998886542 1 46777778899999864
No 240
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=97.87 E-value=9.4e-06 Score=76.74 Aligned_cols=93 Identities=15% Similarity=0.224 Sum_probs=72.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH-hhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM-LTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l-~~~~~~fDvIdL 200 (581)
+.+|||+-||+|..++.++.. | ..|+++|+|+.+++.+++++. .+.++|+..+. ......||+|++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~~----------~~~~~d~~~~~~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 33 WKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKLD----------HVVLGDIETMDMPYEEEQFDCVIF 99 (230)
T ss_dssp CSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTSS----------EEEESCTTTCCCCSCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhCC----------cEEEcchhhcCCCCCCCccCEEEE
Confidence 568999999999999999885 5 689999999999998876541 56788876532 112357999987
Q ss_pred CC-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.- + ..+..++..+.+.|++||.|+++.
T Consensus 100 ~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 100 GDVLEHLFDPWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp ESCGGGSSCHHHHHHHTGGGEEEEEEEEEEE
T ss_pred CChhhhcCCHHHHHHHHHHHcCCCCEEEEEe
Confidence 53 1 234567888889999999999975
No 241
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=97.87 E-value=1.9e-05 Score=82.12 Aligned_cols=103 Identities=17% Similarity=0.198 Sum_probs=80.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.+++..++. +|+++|+ +..++.+++++...++. +++++..+|++..-......||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~p~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEV-EVTIVDL-PQQLEMMRKQTAGLSGS--ERIHGHGANLLDRDVPFPTGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTC-EEEEEEC-HHHHHHHHHHHTTCTTG--GGEEEEECCCCSSSCCCCCCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeC-HHHHHHHHHHHHhcCcc--cceEEEEccccccCCCCCCCcCEEEE
Confidence 35699999999999999999987665 7999999 99999999999988875 68999999986531001357999987
Q ss_pred CC-C-CCC----hHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y-GSP----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y-Gs~----~~fld~A~~~l~~gGlL~vTa 227 (581)
-- . ..+ ..+|..+.++|++||.|+|.-
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIME 287 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 32 1 111 356777889999999998854
No 242
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=97.87 E-value=3.6e-05 Score=79.60 Aligned_cols=100 Identities=12% Similarity=0.154 Sum_probs=80.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|..++.++...++. +|+++|+ +.+++.+++|++.+++. +++++..+|+...- -..+|+|++
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~---~~~~D~v~~ 262 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHFPEL-DSTILNL-PGAIDLVNENAAEKGVA--DRMRGIAVDIYKES---YPEADAVLF 262 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHCTTC-EEEEEEC-GGGHHHHHHHHHHTTCT--TTEEEEECCTTTSC---CCCCSEEEE
T ss_pred CCCEEEEECCcccHHHHHHHHHCCCC-eEEEEec-HHHHHHHHHHHHhcCCC--CCEEEEeCccccCC---CCCCCEEEE
Confidence 35699999999999999999876554 7999999 99999999999999885 57999999987652 123599977
Q ss_pred CC-C-CC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 201 DP-Y-GS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 DP-y-Gs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
-- + .. ...++..+.++|++||.|++..
T Consensus 263 ~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 295 (359)
T 1x19_A 263 CRILYSANEQLSTIMCKKAFDAMRSGGRLLILD 295 (359)
T ss_dssp ESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred echhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 53 2 11 2457778889999999997754
No 243
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.85 E-value=2.5e-05 Score=76.77 Aligned_cols=93 Identities=23% Similarity=0.254 Sum_probs=72.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++.. |. +|+++|+|+.+++.++++.. . . ++++|+..+-. ....||+|++.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~~--~~-~v~gvD~s~~~l~~a~~~~~----~---~--~~~~d~~~~~~-~~~~fD~v~~~ 121 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQER--GF-EVVLVDPSKEMLEVAREKGV----K---N--VVEAKAEDLPF-PSGAFEAVLAL 121 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHTT--TC-EEEEEESCHHHHHHHHHHTC----S---C--EEECCTTSCCS-CTTCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHHc--CC-eEEEEeCCHHHHHHHHhhcC----C---C--EEECcHHHCCC-CCCCEEEEEEc
Confidence 568999999999999999884 54 79999999999999988754 1 1 56778765421 23579999885
Q ss_pred C----C-CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P----Y-GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P----y-Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
. + ..+..++..+.+.|++||.|+++.
T Consensus 122 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 122 GDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 3 1 234578888889999999999875
No 244
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.83 E-value=2.3e-05 Score=73.42 Aligned_cols=92 Identities=11% Similarity=0.053 Sum_probs=65.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCC-ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH------------
Q 047386 122 PPRVLEALSASGLRALRYAREVEG-IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM------------ 188 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~G-a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l------------ 188 (581)
+.+|||+-||+|.+++.++...+. ..+|+++|+|+.+ .. .+++++++|+...-
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~---~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI---PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC---TTCEEEECCTTTTSSCCC--------
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC---CCceEEEccccchhhhhhcccccccc
Confidence 458999999999999999987542 3689999999942 12 34678888875532
Q ss_pred -----------h-hCCCcccEEeeCC-CCC-C---h----------HhHHHHHHhccCCCeEEEEe
Q 047386 189 -----------L-THPKEFDVVDLDP-YGS-P---S----------VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 189 -----------~-~~~~~fDvIdLDP-yGs-~---~----------~fld~A~~~l~~gGlL~vTa 227 (581)
. -....||+|+.|+ +.. . . ..+..+.+.|++||.|+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 154 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKM 154 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 0 1235799999996 211 0 0 14566788999999998853
No 245
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=97.82 E-value=1.8e-05 Score=77.76 Aligned_cols=93 Identities=15% Similarity=0.169 Sum_probs=72.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..+..++...+| ..|+++|+|+.+++.++++. .++.+..+|+..+- .....||+|+.-
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~~~-~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~-~~~~~fD~v~~~ 155 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADALPE-ITTFGLDVSKVAIKAAAKRY--------PQVTFCVASSHRLP-FSDTSMDAIIRI 155 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTCTT-SEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTSCS-BCTTCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHhC--------CCcEEEEcchhhCC-CCCCceeEEEEe
Confidence 568999999999999999986545 47999999999999998874 13578888876532 123579999863
Q ss_pred CCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 PYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 PyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
. ...++..+.+.|++||.|++..
T Consensus 156 ~---~~~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 156 Y---APCKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp S---CCCCHHHHHHHEEEEEEEEEEE
T ss_pred C---ChhhHHHHHHhcCCCcEEEEEE
Confidence 2 1256888899999999998874
No 246
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.82 E-value=4.2e-05 Score=78.51 Aligned_cols=140 Identities=16% Similarity=0.127 Sum_probs=87.4
Q ss_pred CCCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEE-EehhHHHHHhh-CC-Cccc
Q 047386 120 LKPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVES-HLADARVYMLT-HP-KEFD 196 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v-~~~DA~~~l~~-~~-~~fD 196 (581)
..+.+|||+-||||.++..++. .|+.+|+++|+++..++...++ . .++.. ...|+..+-.. .. ..||
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~--~ga~~V~aVDvs~~mL~~a~r~----~----~rv~~~~~~ni~~l~~~~l~~~~fD 153 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQ--NGAKLVYAVDVGTNQLVWKLRQ----D----DRVRSMEQYNFRYAEPVDFTEGLPS 153 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCSEEEEECSSSSCSCHHHHT----C----TTEEEECSCCGGGCCGGGCTTCCCS
T ss_pred ccccEEEecCCCccHHHHHHHh--CCCCEEEEEECCHHHHHHHHHh----C----cccceecccCceecchhhCCCCCCC
Confidence 3577999999999999998888 4889999999999988763322 1 12222 22344322111 12 2499
Q ss_pred EEeeCC-CCCChHhHHHHHHhccCCCeEEEEeccchhhcCCCcchhhhhccC-ccCCCccchhhhHHHHHHHHHHHHHHc
Q 047386 197 VVDLDP-YGSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGNGEVCYSKYGS-YPLRGKYCHEMALRILLACIESHANRY 274 (581)
Q Consensus 197 vIdLDP-yGs~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~~~~c~rkYG~-~~~k~~~~hE~~lRill~~i~~~Aa~~ 274 (581)
+|..|- |-+....+....+.|++||.|++.- ...-+......|. -+++.+..|. ..+..+...+...
T Consensus 154 ~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~lv-------kPqfe~~~~~~~~~G~vrd~~~~~----~~~~~v~~~~~~~ 222 (291)
T 3hp7_A 154 FASIDVSFISLNLILPALAKILVDGGQVVALV-------KPQFEAGREQIGKNGIVRESSIHE----KVLETVTAFAVDY 222 (291)
T ss_dssp EEEECCSSSCGGGTHHHHHHHSCTTCEEEEEE-------CGGGTSCGGGCC-CCCCCCHHHHH----HHHHHHHHHHHHT
T ss_pred EEEEEeeHhhHHHHHHHHHHHcCcCCEEEEEE-------CcccccChhhcCCCCccCCHHHHH----HHHHHHHHHHHHC
Confidence 999996 6666678888899999999998852 1111111112221 1334444444 4555556666777
Q ss_pred CCceEE
Q 047386 275 KRYIEP 280 (581)
Q Consensus 275 ~r~i~P 280 (581)
|..+.-
T Consensus 223 Gf~v~~ 228 (291)
T 3hp7_A 223 GFSVKG 228 (291)
T ss_dssp TEEEEE
T ss_pred CCEEEE
Confidence 766544
No 247
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.82 E-value=4.2e-05 Score=76.90 Aligned_cols=105 Identities=12% Similarity=0.031 Sum_probs=75.4
Q ss_pred CCeEEEecCcccHHHHHHhhhc-------CC----ccEEEEEeCCH---H-----------HHHHHHHHHHHh-------
Q 047386 122 PPRVLEALSASGLRALRYAREV-------EG----IGQVVALDNDK---A-----------SVEACRRNIKFN------- 169 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~-------~G----a~~V~anD~s~---~-----------Ave~i~~Ni~~N------- 169 (581)
+.+|||.-.|||.-.+..+... +. ..+++.+|.+| + ..++++++++.-
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g~ 140 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 140 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSEE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccch
Confidence 4589999999999887765432 32 24799999987 2 223566666531
Q ss_pred ---CCC-CCCcEEEEehhHHHHHhhCCC----cccEEeeCCCCC-------ChHhHHHHHHhccCCCeEEEE
Q 047386 170 ---GSV-ACSKVESHLADARVYMLTHPK----EFDVVDLDPYGS-------PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 170 ---~~~-~~~~v~v~~~DA~~~l~~~~~----~fDvIdLDPyGs-------~~~fld~A~~~l~~gGlL~vT 226 (581)
.+. ...+++++.+||...+..... .||+|++|||.. ...|++...+++++||+|.+-
T Consensus 141 ~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ty 212 (257)
T 2qy6_A 141 HRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATF 212 (257)
T ss_dssp EEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEES
T ss_pred hheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEEE
Confidence 011 113678999999999876533 799999999853 236888889999999999853
No 248
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=97.80 E-value=3.9e-05 Score=78.78 Aligned_cols=102 Identities=18% Similarity=0.075 Sum_probs=81.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.+++..++ .+++.+|+ +..++.+++++..+++. +++++..+|+...-......||+|++-
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~-~~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQ-LTGQIWDL-PTTRDAARKTIHAHDLG--GRVEFFEKNLLDARNFEGGAADVVMLN 255 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTT-CEEEEEEC-GGGHHHHHHHHHHTTCG--GGEEEEECCTTCGGGGTTCCEEEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCC-CeEEEEEC-HHHHHHHHHHHHhcCCC--CceEEEeCCcccCcccCCCCccEEEEe
Confidence 569999999999999999987665 47999999 88999999999999885 689999999876531124569999874
Q ss_pred C-C-CCC----hHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GSP----SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs~----~~fld~A~~~l~~gGlL~vTa 227 (581)
- . ..+ ..++..+.++|++||.|++.-
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 287 (352)
T 3mcz_A 256 DCLHYFDAREAREVIGHAAGLVKPGGALLILT 287 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 1 112 467788889999999998864
No 249
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=97.79 E-value=8.3e-05 Score=75.89 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=80.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
..+|||+-||+|..++..+...++. +++.+|+ +..++.+++++...++. +++++..+|++.- ....||+|++=
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~~~--~~v~~~~~d~~~~---~p~~~D~v~~~ 242 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDL-SGTVLDL-QGPASAAHRRFLDTGLS--GRAQVVVGSFFDP---LPAGAGGYVLS 242 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTSC---CCCSCSEEEEE
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCC-eEEEecC-HHHHHHHHHhhhhcCcC--cCeEEecCCCCCC---CCCCCcEEEEe
Confidence 3589999999999999999876664 6999999 99999999999998885 6899999998622 23379999863
Q ss_pred C----CCC--ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P----YGS--PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P----yGs--~~~fld~A~~~l~~gGlL~vTa 227 (581)
- +.. ...++..+.++|++||.|+|.-
T Consensus 243 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 274 (332)
T 3i53_A 243 AVLHDWDDLSAVAILRRCAEAAGSGGVVLVIE 274 (332)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 2 111 1457788889999999999864
No 250
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=97.78 E-value=0.00011 Score=76.57 Aligned_cols=99 Identities=13% Similarity=0.108 Sum_probs=80.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...+++ ++++.|+ +..++.+++++...++. +++++..+|++.-+ ...||+|++-
T Consensus 203 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~~~~~~l~--~~v~~~~~d~~~~~---p~~~D~v~~~ 275 (369)
T 3gwz_A 203 AATAVDIGGGRGSLMAAVLDAFPGL-RGTLLER-PPVAEEARELLTGRGLA--DRCEILPGDFFETI---PDGADVYLIK 275 (369)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHHHHHHHHHHTTCT--TTEEEEECCTTTCC---CSSCSEEEEE
T ss_pred CcEEEEeCCCccHHHHHHHHHCCCC-eEEEEcC-HHHHHHHHHhhhhcCcC--CceEEeccCCCCCC---CCCceEEEhh
Confidence 4699999999999999999876654 6999999 99999999999999885 68999999987322 3379999874
Q ss_pred C-C-CCCh----HhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GSPS----VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs~~----~fld~A~~~l~~gGlL~vTa 227 (581)
- . ..+. .++..+.++|++||.|+|.-
T Consensus 276 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 307 (369)
T 3gwz_A 276 HVLHDWDDDDVVRILRRIATAMKPDSRLLVID 307 (369)
T ss_dssp SCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 1 1121 47888889999999998853
No 251
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.77 E-value=1.2e-05 Score=81.75 Aligned_cols=105 Identities=14% Similarity=0.011 Sum_probs=73.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|.+++-++.+ .+...|++.|+|+.+++++++|+..||+. ..+...|...-. ....||+|.+-
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~----~~~~v~D~~~~~--p~~~~DvaL~l 205 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP----HRTNVADLLEDR--LDEPADVTLLL 205 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC----EEEEECCTTTSC--CCSCCSEEEET
T ss_pred CceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC----ceEEEeeecccC--CCCCcchHHHH
Confidence 559999999999999999997 45778999999999999999999999985 466666643222 25689999542
Q ss_pred -CC------CCChHhHHHHHHhccCCCeEEEEeccchhhcCCC
Q 047386 202 -PY------GSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGN 237 (581)
Q Consensus 202 -Py------Gs~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~ 237 (581)
=. ...+-| ..+++|+.+|++.-. |+..|.|..
T Consensus 206 kti~~Le~q~kg~g~--~ll~aL~~~~vvVSf--p~ksl~Grs 244 (281)
T 3lcv_B 206 KTLPCLETQQRGSGW--EVIDIVNSPNIVVTF--PTKSLGQRS 244 (281)
T ss_dssp TCHHHHHHHSTTHHH--HHHHHSSCSEEEEEE--ECC------
T ss_pred HHHHHhhhhhhHHHH--HHHHHhCCCCEEEec--cchhhcCCC
Confidence 21 222223 457888888776543 566666644
No 252
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.70 E-value=3.9e-05 Score=79.73 Aligned_cols=71 Identities=15% Similarity=0.037 Sum_probs=58.0
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+|||+|++++-+.+ .|++.|+++|+|+.|++..+.|.. .. . ++|+..+....-..+|+|+.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~--aG~~~v~~~e~d~~a~~t~~~N~~--~~-----~---~~Di~~~~~~~~~~~D~l~~ 77 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALES--CGAECVYSNEWDKYAQEVYEMNFG--EK-----P---EGDITQVNEKTIPDHDILCA 77 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHH--TTCEEEEEECCCHHHHHHHHHHHS--CC-----C---BSCGGGSCGGGSCCCSEEEE
T ss_pred CCCcEEEECCCcCHHHHHHHH--CCCeEEEEEeCCHHHHHHHHHHcC--CC-----C---cCCHHHcCHhhCCCCCEEEE
Confidence 357999999999999999987 599999999999999999999973 11 1 68887765443346999999
Q ss_pred CCC
Q 047386 201 DPY 203 (581)
Q Consensus 201 DPy 203 (581)
+|+
T Consensus 78 gpP 80 (327)
T 2c7p_A 78 GFP 80 (327)
T ss_dssp ECC
T ss_pred CCC
Confidence 985
No 253
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.69 E-value=1.6e-05 Score=82.95 Aligned_cols=71 Identities=21% Similarity=0.187 Sum_probs=56.4
Q ss_pred CeEEEecCcccHHHHHHhhhcCC--ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-C-CcccEE
Q 047386 123 PRVLEALSASGLRALRYAREVEG--IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-P-KEFDVV 198 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~G--a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~-~~fDvI 198 (581)
.+|||+|||+|++++-+.+. | ++.|+++|+|+.|++..+.|... ..++++|+..+.... . ..+|+|
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~--G~~~~~v~~~E~d~~a~~~~~~N~~~--------~~~~~~Di~~~~~~~~~~~~~D~l 72 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRES--CIPAQVVAAIDVNTVANEVYKYNFPH--------TQLLAKTIEGITLEEFDRLSFDMI 72 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHH--TCSEEEEEEECCCHHHHHHHHHHCTT--------SCEECSCGGGCCHHHHHHHCCSEE
T ss_pred CeEEEeCcCccHHHHHHHHC--CCCceEEEEEeCCHHHHHHHHHhccc--------cccccCCHHHccHhHcCcCCcCEE
Confidence 47999999999999999874 7 67899999999999999999741 235678877654211 1 158999
Q ss_pred eeCCC
Q 047386 199 DLDPY 203 (581)
Q Consensus 199 dLDPy 203 (581)
+.+|+
T Consensus 73 ~~gpP 77 (343)
T 1g55_A 73 LMSPP 77 (343)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 99997
No 254
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=97.68 E-value=0.00013 Score=73.09 Aligned_cols=104 Identities=10% Similarity=0.104 Sum_probs=72.4
Q ss_pred CCeEEEecCcccHHHHHHhhhc----CCcc-EEEEEeCCHHHHHHHHHHHHHh-CCCCCCcEEEEehhHHHHHhh-----
Q 047386 122 PPRVLEALSASGLRALRYAREV----EGIG-QVVALDNDKASVEACRRNIKFN-GSVACSKVESHLADARVYMLT----- 190 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~----~Ga~-~V~anD~s~~Ave~i~~Ni~~N-~~~~~~~v~v~~~DA~~~l~~----- 190 (581)
+.+|||+-||||.+++.++..+ +++. .++++|.|+..++.+++++... ++.. -.+.+..+|+..+...
T Consensus 53 ~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~~~~~ 131 (292)
T 2aot_A 53 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLEN-VKFAWHKETSSEYQSRMLEKK 131 (292)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTT-EEEEEECSCHHHHHHHHHTTT
T ss_pred CCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCc-ceEEEEecchhhhhhhhcccc
Confidence 4589999999998876544322 3442 3499999999999999998753 4421 1345567787765421
Q ss_pred CCCcccEEeeCC----CCCChHhHHHHHHhccCCCeEEEE
Q 047386 191 HPKEFDVVDLDP----YGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 191 ~~~~fDvIdLDP----yGs~~~fld~A~~~l~~gGlL~vT 226 (581)
....||+|..== ...+..+|....+.|++||.|++.
T Consensus 132 ~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 132 ELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp CCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred CCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 246799996432 122356788888999999999986
No 255
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.66 E-value=3.7e-05 Score=73.50 Aligned_cols=88 Identities=19% Similarity=0.222 Sum_probs=69.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|..++.++.. +++|+|+.+++.++++ + ++++++|+..+- .....||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~----~------~~~~~~d~~~~~-~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR----G------VFVLKGTAENLP-LKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT----T------CEEEECBTTBCC-SCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc----C------CEEEEcccccCC-CCCCCeeEEEEc
Confidence 458999999999999988762 9999999999999887 3 367788875432 123579999876
Q ss_pred C-C---CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
- + ..+..++..+.++|++||.|+++.
T Consensus 110 ~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~ 139 (219)
T 1vlm_A 110 TTICFVDDPERALKEAYRILKKGGYLIVGI 139 (219)
T ss_dssp SCGGGSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred chHhhccCHHHHHHHHHHHcCCCcEEEEEE
Confidence 4 1 234578888899999999999975
No 256
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.66 E-value=0.00012 Score=81.22 Aligned_cols=98 Identities=20% Similarity=0.245 Sum_probs=75.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdL 200 (581)
+.+|||+-||+|+++..+|+. |+ .|+++|+++.+++.++..+..++.- ++.+.++|+..+... ...+||+|..
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~--ga-~V~giD~~~~~i~~a~~~a~~~~~~---~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASK--GA-TIVGIDFQQENINVCRALAEENPDF---AAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHHHTSTTS---EEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhC--CC-EEEEECCCHHHHHHHHHHHHhcCCC---ceEEEECCHHHHhhhccCCCccEEEE
Confidence 569999999999999999994 87 5999999999999999999988742 589999999998754 3468999942
Q ss_pred --------CCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 201 --------DPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 201 --------DPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||.+ ...+-..+..|+++|..++.+
T Consensus 141 ~e~~ehv~~~~~--~~~~~~~~~tl~~~~~~~~~~ 173 (569)
T 4azs_A 141 LSVFHHIVHLHG--IDEVKRLLSRLADVTQAVILE 173 (569)
T ss_dssp ESCHHHHHHHHC--HHHHHHHHHHHHHHSSEEEEE
T ss_pred CcchhcCCCHHH--HHHHHHHHHHhccccceeeEE
Confidence 3311 111223345677777766654
No 257
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=97.62 E-value=5.4e-05 Score=80.14 Aligned_cols=71 Identities=18% Similarity=0.181 Sum_probs=57.3
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-------CCCcc
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-------HPKEF 195 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-------~~~~f 195 (581)
.+|||+|||+|++++-+... |.+.|+++|+|+.|++..+.|.. ...++++|+..+... ....+
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~~--------~~~~~~~DI~~~~~~~~~~~~~~~~~~ 72 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINFP--------RSLHVQEDVSLLNAEIIKGFFKNDMPI 72 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHCT--------TSEEECCCGGGCCHHHHHHHHCSCCCC
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhCC--------CCceEecChhhcCHHHHHhhcccCCCe
Confidence 47999999999999998874 89999999999999999999853 235677887654221 13579
Q ss_pred cEEeeCCC
Q 047386 196 DVVDLDPY 203 (581)
Q Consensus 196 DvIdLDPy 203 (581)
|+|..+|+
T Consensus 73 D~i~ggpP 80 (376)
T 3g7u_A 73 DGIIGGPP 80 (376)
T ss_dssp CEEEECCC
T ss_pred eEEEecCC
Confidence 99999997
No 258
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.61 E-value=0.00012 Score=73.74 Aligned_cols=103 Identities=18% Similarity=0.073 Sum_probs=71.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.+.+|||+-||+|.+++.++ +...+++.|||+.+++.+++|+..|+.. +.+...|...... ...||+|.+
T Consensus 105 ~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g~~----~~~~v~D~~~~~~--~~~~DvvLl 174 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKDWD----FTFALQDVLCAPP--AEAGDLALI 174 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTTCE----EEEEECCTTTSCC--CCBCSEEEE
T ss_pred CCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcCCC----ceEEEeecccCCC--CCCcchHHH
Confidence 35699999999999999988 4578999999999999999999999964 5777777654332 468999954
Q ss_pred C---CC----CCChHhHHHHHHhccCCCeEEEEeccchhhcCCC
Q 047386 201 D---PY----GSPSVFLDSAIQSVADGGMLMCTATDMAVLCGGN 237 (581)
Q Consensus 201 D---Py----Gs~~~fld~A~~~l~~gGlL~vTaTD~a~Lcg~~ 237 (581)
= |. ... -+...++.|+.+|++.- . ++..|.|..
T Consensus 175 lk~lh~LE~q~~~--~~~~ll~aL~~~~vvVs-f-Ptksl~Gr~ 214 (253)
T 3frh_A 175 FKLLPLLEREQAG--SAMALLQSLNTPRMAVS-F-PTRSLGGRG 214 (253)
T ss_dssp ESCHHHHHHHSTT--HHHHHHHHCBCSEEEEE-E-ECC------
T ss_pred HHHHHHhhhhchh--hHHHHHHHhcCCCEEEE-c-ChHHhcCCC
Confidence 3 21 111 22256778888866543 3 466776643
No 259
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=97.58 E-value=5e-05 Score=76.04 Aligned_cols=93 Identities=20% Similarity=0.176 Sum_probs=71.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||||..+..++.. | .+|+++|+|+..++.+++ . .++++.++|+..+-. ....||+|..-
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~--~-~~v~gvD~s~~ml~~a~~------~---~~v~~~~~~~e~~~~-~~~sfD~v~~~ 106 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF--F-ERVHAVDPGEAQIRQALR------H---PRVTYAVAPAEDTGL-PPASVDVAIAA 106 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT--C-SEEEEEESCHHHHHTCCC------C---TTEEEEECCTTCCCC-CSSCEEEEEEC
T ss_pred CCCEEEEcCCCCHHHHHHHHh--C-CEEEEEeCcHHhhhhhhh------c---CCceeehhhhhhhcc-cCCcccEEEEe
Confidence 348999999999999988873 5 589999999998876542 1 368899999865422 24689999764
Q ss_pred C---CCCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P---YGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P---yGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
= +-.+..++..+.+.|++||+|++..
T Consensus 107 ~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 107 QAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp SCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 2 2224568888899999999998865
No 260
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.57 E-value=0.00012 Score=72.34 Aligned_cols=85 Identities=11% Similarity=0.119 Sum_probs=63.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|.+++.++.. + .+|+++|+|+.+++.+++|+.. . ++++++++|+..+-......| .|+.+
T Consensus 31 ~~~VLDiG~G~G~lt~~l~~~--~-~~v~~vD~~~~~~~~a~~~~~~--~---~~v~~~~~D~~~~~~~~~~~~-~vv~n 101 (244)
T 1qam_A 31 HDNIFEIGSGKGHFTLELVQR--C-NFVTAIEIDHKLCKTTENKLVD--H---DNFQVLNKDILQFKFPKNQSY-KIFGN 101 (244)
T ss_dssp TCEEEEECCTTSHHHHHHHHH--S-SEEEEECSCHHHHHHHHHHTTT--C---CSEEEECCCGGGCCCCSSCCC-EEEEE
T ss_pred CCEEEEEeCCchHHHHHHHHc--C-CeEEEEECCHHHHHHHHHhhcc--C---CCeEEEEChHHhCCcccCCCe-EEEEe
Confidence 558999999999999999985 4 6899999999999999999863 1 368999999976532212345 45566
Q ss_pred C-CCCChHhHHHHHH
Q 047386 202 P-YGSPSVFLDSAIQ 215 (581)
Q Consensus 202 P-yGs~~~fld~A~~ 215 (581)
| |....+.+...+.
T Consensus 102 lPy~~~~~~l~~~l~ 116 (244)
T 1qam_A 102 IPYNISTDIIRKIVF 116 (244)
T ss_dssp CCGGGHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHh
Confidence 4 6554555554444
No 261
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.57 E-value=3.4e-05 Score=76.98 Aligned_cols=105 Identities=14% Similarity=0.021 Sum_probs=69.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHH-----------------hCCCC----------
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKF-----------------NGSVA---------- 173 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~-----------------N~~~~---------- 173 (581)
.+.+|||+-||+|..++.++.. +..+|+++|+|+.+++.++++++. .+...
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS--HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG--GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc--CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 4679999999999966555442 345899999999999999987642 11100
Q ss_pred CCcEEEEehhHHHHHhh-----CCCcccEEeeCC-C--C-----CChHhHHHHHHhccCCCeEEEEe
Q 047386 174 CSKVESHLADARVYMLT-----HPKEFDVVDLDP-Y--G-----SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 174 ~~~v~v~~~DA~~~l~~-----~~~~fDvIdLDP-y--G-----s~~~fld~A~~~l~~gGlL~vTa 227 (581)
...++++++|+...+.- ....||+|+.-- + . .+..++..+.+.|++||.|+++.
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~ 215 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIG 215 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 00145677787653211 124599997543 1 0 12356667778999999999963
No 262
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.53 E-value=0.00018 Score=79.46 Aligned_cols=108 Identities=13% Similarity=0.178 Sum_probs=78.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCC------------ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH
Q 047386 121 KPPRVLEALSASGLRALRYAREVEG------------IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM 188 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~G------------a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l 188 (581)
.+.+|||..||||.|=+.+...+.. -..++.+|+++.++.+++-|+-+.|+. ...+.++|....-
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~---~~~I~~~dtL~~~ 293 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLE---YPRIDPENSLRFP 293 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCS---CCEEECSCTTCSC
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCc---cccccccccccCc
Confidence 4568999999999998877654311 135899999999999999999999985 2356788875421
Q ss_pred -hhC--CCcccEEeeCC-CCCC-------------------hHhHHHHHHhcc-------CCCeEEEEeccch
Q 047386 189 -LTH--PKEFDVVDLDP-YGSP-------------------SVFLDSAIQSVA-------DGGMLMCTATDMA 231 (581)
Q Consensus 189 -~~~--~~~fDvIdLDP-yGs~-------------------~~fld~A~~~l~-------~gGlL~vTaTD~a 231 (581)
... ..+||+|+..| ||.. ..|+...++.|+ +||.+++--.+..
T Consensus 294 ~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~g~ 366 (530)
T 3ufb_A 294 LREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPNGT 366 (530)
T ss_dssp GGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEHHH
T ss_pred hhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEecchh
Confidence 111 24799999998 6531 146777788886 6899887654443
No 263
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=97.51 E-value=0.00026 Score=72.61 Aligned_cols=85 Identities=20% Similarity=0.130 Sum_probs=67.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|.++..++.. +.+|+++|+|+.+++.+++|+. +. .+++++++|+..+-.. ...||+|+.+
T Consensus 51 ~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~---~~v~vi~gD~l~~~~~-~~~fD~Iv~N 121 (295)
T 3gru_A 51 DDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LY---NNIEIIWGDALKVDLN-KLDFNKVVAN 121 (295)
T ss_dssp TCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HC---SSEEEEESCTTTSCGG-GSCCSEEEEE
T ss_pred cCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cC---CCeEEEECchhhCCcc-cCCccEEEEe
Confidence 568999999999999999985 4689999999999999999998 22 4689999999765322 2369999998
Q ss_pred C-CCCChHhHHHHHH
Q 047386 202 P-YGSPSVFLDSAIQ 215 (581)
Q Consensus 202 P-yGs~~~fld~A~~ 215 (581)
+ |.-..+.+...+.
T Consensus 122 lPy~is~pil~~lL~ 136 (295)
T 3gru_A 122 LPYQISSPITFKLIK 136 (295)
T ss_dssp CCGGGHHHHHHHHHH
T ss_pred CcccccHHHHHHHHh
Confidence 5 6555566644443
No 264
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.49 E-value=9.6e-05 Score=77.80 Aligned_cols=98 Identities=12% Similarity=0.126 Sum_probs=71.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEE-EEehhHHHHHhhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVE-SHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~-v~~~DA~~~l~~~~~~fDvIdL 200 (581)
+.+|||+-||+|.+...++.. |. .|+++|+|+.+++.++++ ++. .... +..+|+..+-. ....||+|+.
T Consensus 108 ~~~VLDiGcG~G~~~~~l~~~--g~-~v~gvD~s~~~~~~a~~~----~~~--~~~~~~~~~~~~~l~~-~~~~fD~I~~ 177 (416)
T 4e2x_A 108 DPFIVEIGCNDGIMLRTIQEA--GV-RHLGFEPSSGVAAKAREK----GIR--VRTDFFEKATADDVRR-TEGPANVIYA 177 (416)
T ss_dssp SCEEEEETCTTTTTHHHHHHT--TC-EEEEECCCHHHHHHHHTT----TCC--EECSCCSHHHHHHHHH-HHCCEEEEEE
T ss_pred CCEEEEecCCCCHHHHHHHHc--CC-cEEEECCCHHHHHHHHHc----CCC--cceeeechhhHhhccc-CCCCEEEEEE
Confidence 568999999999999999874 65 899999999999988876 443 1111 22344443322 2358999986
Q ss_pred CC----CCCChHhHHHHHHhccCCCeEEEEecc
Q 047386 201 DP----YGSPSVFLDSAIQSVADGGMLMCTATD 229 (581)
Q Consensus 201 DP----yGs~~~fld~A~~~l~~gGlL~vTaTD 229 (581)
-- ...+..++..+.++|++||+|+++...
T Consensus 178 ~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~ 210 (416)
T 4e2x_A 178 ANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPY 210 (416)
T ss_dssp ESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 53 123567899999999999999998544
No 265
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=97.45 E-value=0.00053 Score=68.86 Aligned_cols=99 Identities=16% Similarity=0.058 Sum_probs=74.1
Q ss_pred CeEEEecCcc---cHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH--H-------hh
Q 047386 123 PRVLEALSAS---GLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY--M-------LT 190 (581)
Q Consensus 123 ~~VLDafsgS---G~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~--l-------~~ 190 (581)
.+|||+-||+ |.+...++...++ .+|+++|+|+..++..++++..+ .+++++++|+... + ..
T Consensus 79 ~~vLDlGcG~pt~G~~~~~~~~~~p~-~~v~~vD~sp~~l~~Ar~~~~~~-----~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 79 SQFLDLGSGLPTVQNTHEVAQSVNPD-ARVVYVDIDPMVLTHGRALLAKD-----PNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CEEEEETCCSCCSSCHHHHHHHHCTT-CEEEEEESSHHHHHHHHHHHTTC-----TTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CEEEEECCCCCCCChHHHHHHHhCCC-CEEEEEECChHHHHHHHHhcCCC-----CCeEEEEeeCCCchhhhccchhhcc
Confidence 5899999999 9887666554455 47999999999999999998421 4689999998642 1 11
Q ss_pred CC-CcccEEeeCC---CC---CChHhHHHHHHhccCCCeEEEEe
Q 047386 191 HP-KEFDVVDLDP---YG---SPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 191 ~~-~~fDvIdLDP---yG---s~~~fld~A~~~l~~gGlL~vTa 227 (581)
.. ..||+|.+-- |- .+..++....++|++||.|+++.
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~ 196 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTS 196 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 11 3789987653 11 13567888889999999999975
No 266
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.40 E-value=3.4e-06 Score=83.00 Aligned_cols=81 Identities=14% Similarity=0.175 Sum_probs=62.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||+|.+++.++.. + .+|+++|+|+.+++.+++|+. +. .+++++++|+..+-......| +|+.+
T Consensus 30 ~~~VLDiG~G~G~~~~~l~~~--~-~~v~~id~~~~~~~~a~~~~~--~~---~~v~~~~~D~~~~~~~~~~~f-~vv~n 100 (245)
T 1yub_A 30 TDTVYEIGTGKGHLTTKLAKI--S-KQVTSIELDSHLFNLSSEKLK--LN---TRVTLIHQDILQFQFPNKQRY-KIVGN 100 (245)
T ss_dssp SEEEEECSCCCSSCSHHHHHH--S-SEEEESSSSCSSSSSSSCTTT--TC---SEEEECCSCCTTTTCCCSSEE-EEEEE
T ss_pred CCEEEEEeCCCCHHHHHHHHh--C-CeEEEEECCHHHHHHHHHHhc--cC---CceEEEECChhhcCcccCCCc-EEEEe
Confidence 458999999999999999985 4 689999999999999999887 22 478999999976542212468 66677
Q ss_pred C-CCCChHhHH
Q 047386 202 P-YGSPSVFLD 211 (581)
Q Consensus 202 P-yGs~~~fld 211 (581)
| |....+.+.
T Consensus 101 ~Py~~~~~~~~ 111 (245)
T 1yub_A 101 IPYHLSTQIIK 111 (245)
T ss_dssp CCSSSCHHHHH
T ss_pred CCccccHHHHH
Confidence 5 654444443
No 267
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.36 E-value=0.00028 Score=71.44 Aligned_cols=85 Identities=15% Similarity=0.183 Sum_probs=68.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+ +|||+-||+|.++...+.. | .+|+++|+|+..++.+++|+. + .+++++++|+..+-......||+|+-.
T Consensus 48 ~-~VLEIG~G~G~lt~~L~~~--~-~~V~avEid~~~~~~l~~~~~--~----~~v~vi~~D~l~~~~~~~~~~~~iv~N 117 (271)
T 3fut_A 48 G-PVFEVGPGLGALTRALLEA--G-AEVTAIEKDLRLRPVLEETLS--G----LPVRLVFQDALLYPWEEVPQGSLLVAN 117 (271)
T ss_dssp S-CEEEECCTTSHHHHHHHHT--T-CCEEEEESCGGGHHHHHHHTT--T----SSEEEEESCGGGSCGGGSCTTEEEEEE
T ss_pred C-eEEEEeCchHHHHHHHHHc--C-CEEEEEECCHHHHHHHHHhcC--C----CCEEEEECChhhCChhhccCccEEEec
Confidence 5 8999999999999999984 5 579999999999999999986 1 368999999977633211358999888
Q ss_pred C-CCCChHhHHHHHHh
Q 047386 202 P-YGSPSVFLDSAIQS 216 (581)
Q Consensus 202 P-yGs~~~fld~A~~~ 216 (581)
+ |.-.++++...+..
T Consensus 118 lPy~iss~il~~ll~~ 133 (271)
T 3fut_A 118 LPYHIATPLVTRLLKT 133 (271)
T ss_dssp ECSSCCHHHHHHHHHH
T ss_pred CcccccHHHHHHHhcC
Confidence 5 76677887666654
No 268
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.30 E-value=0.00017 Score=73.82 Aligned_cols=85 Identities=18% Similarity=0.156 Sum_probs=59.6
Q ss_pred CCeEEEecC------cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEE-EehhHHHHHhhCCCc
Q 047386 122 PPRVLEALS------ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVES-HLADARVYMLTHPKE 194 (581)
Q Consensus 122 ~~~VLDafs------gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v-~~~DA~~~l~~~~~~ 194 (581)
+.+|||+-| |+|. ..++..++...+|+++|+++. +. ++++ +++|+..+-. ...
T Consensus 64 g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~---~v~~~i~gD~~~~~~--~~~ 123 (290)
T 2xyq_A 64 NMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VS---DADSTLIGDCATVHT--ANK 123 (290)
T ss_dssp TCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BC---SSSEEEESCGGGCCC--SSC
T ss_pred CCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CC---CCEEEEECccccCCc--cCc
Confidence 569999999 4477 334444332358999999998 11 3567 8999876432 257
Q ss_pred ccEEeeCCCCCC---------------hHhHHHHHHhccCCCeEEEE
Q 047386 195 FDVVDLDPYGSP---------------SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 195 fDvIdLDPyGs~---------------~~fld~A~~~l~~gGlL~vT 226 (581)
||+|+.|++-.. ...+..+.+.|++||.|++.
T Consensus 124 fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~ 170 (290)
T 2xyq_A 124 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 170 (290)
T ss_dssp EEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 999999964211 13566678899999999985
No 269
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.28 E-value=0.00026 Score=71.82 Aligned_cols=109 Identities=20% Similarity=0.176 Sum_probs=71.8
Q ss_pred CCeEEEecCcccH----HHHHHhhhcCC---ccEEEEEeCCHHHHHHHHHHHH----HhCCC---------------C--
Q 047386 122 PPRVLEALSASGL----RALRYAREVEG---IGQVVALDNDKASVEACRRNIK----FNGSV---------------A-- 173 (581)
Q Consensus 122 ~~~VLDafsgSG~----rgIr~a~E~~G---a~~V~anD~s~~Ave~i~~Ni~----~N~~~---------------~-- 173 (581)
+.+|||+-||||- +++..+...+. --+|++.|+|+.+++.+++|+- ..+++ .
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4689999999998 66666654331 1379999999999999999861 00000 0
Q ss_pred -------CCcEEEEehhHHHHHhhCCCcccEEeeCC---CCCC---hHhHHHHHHhccCCCeEEEEeccc
Q 047386 174 -------CSKVESHLADARVYMLTHPKEFDVVDLDP---YGSP---SVFLDSAIQSVADGGMLMCTATDM 230 (581)
Q Consensus 174 -------~~~v~v~~~DA~~~l~~~~~~fDvIdLDP---yGs~---~~fld~A~~~l~~gGlL~vTaTD~ 230 (581)
..+|.+.++|....-......||+|+.== |-.+ ...+....++|++||+|++..+..
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg~sE~ 255 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAGHSEN 255 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEECTTCC
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEEeccc
Confidence 02578888887552011125799998621 2221 245566678999999999976443
No 270
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.27 E-value=0.00099 Score=66.32 Aligned_cols=84 Identities=18% Similarity=0.225 Sum_probs=64.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHH-hhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYM-LTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l-~~~~~~fDvIdL 200 (581)
+.+|||+.||+|.+++.++.. |+.+|+++|+|+.+++.+++| .. .+++++++|+..+- ......| +|+.
T Consensus 32 ~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~---~~v~~i~~D~~~~~~~~~~~~~-~vv~ 101 (249)
T 3ftd_A 32 GNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GD---ERLEVINEDASKFPFCSLGKEL-KVVG 101 (249)
T ss_dssp TCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CC---TTEEEECSCTTTCCGGGSCSSE-EEEE
T ss_pred cCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cC---CCeEEEEcchhhCChhHccCCc-EEEE
Confidence 558999999999999999984 678999999999999999988 21 46899999997652 2211234 6777
Q ss_pred CC-CCCChHhHHHHHH
Q 047386 201 DP-YGSPSVFLDSAIQ 215 (581)
Q Consensus 201 DP-yGs~~~fld~A~~ 215 (581)
+| |.-..+++...+.
T Consensus 102 NlPy~i~~~il~~ll~ 117 (249)
T 3ftd_A 102 NLPYNVASLIIENTVY 117 (249)
T ss_dssp ECCTTTHHHHHHHHHH
T ss_pred ECchhccHHHHHHHHh
Confidence 75 6656677665554
No 271
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.26 E-value=0.0005 Score=64.98 Aligned_cols=81 Identities=16% Similarity=0.094 Sum_probs=60.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++ ..|+++|+|+. ++ .+.++|+..+- .....||+|++.
T Consensus 68 ~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~------------~~------~~~~~d~~~~~-~~~~~fD~v~~~ 122 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR------NPVHCFDLASL------------DP------RVTVCDMAQVP-LEDESVDVAVFC 122 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC------SCEEEEESSCS------------ST------TEEESCTTSCS-CCTTCEEEEEEE
T ss_pred CCeEEEECCcCCHHHHHhh------ccEEEEeCCCC------------Cc------eEEEeccccCC-CCCCCEeEEEEe
Confidence 4689999999999988763 46999999988 22 35677776532 123579999875
Q ss_pred C-C--CCChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y--GSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y--Gs~~~fld~A~~~l~~gGlL~vTa 227 (581)
. + ..+..++..+.++|++||.|+++.
T Consensus 123 ~~l~~~~~~~~l~~~~~~L~~gG~l~i~~ 151 (215)
T 2zfu_A 123 LSLMGTNIRDFLEEANRVLKPGGLLKVAE 151 (215)
T ss_dssp SCCCSSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred hhccccCHHHHHHHHHHhCCCCeEEEEEE
Confidence 4 2 224578888899999999999863
No 272
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.26 E-value=0.0003 Score=70.47 Aligned_cols=86 Identities=15% Similarity=0.138 Sum_probs=65.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH-HhhC--CCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY-MLTH--PKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~-l~~~--~~~fDvI 198 (581)
+.+|||+.||+|.+++..+.. + .+|+++|+|+.+++.+++|+.. . .+++++++|+..+ +... ...||+|
T Consensus 30 ~~~VLEIG~G~G~lt~~La~~--~-~~V~avEid~~~~~~~~~~~~~--~---~~v~~i~~D~~~~~~~~~~~~~~~~vv 101 (255)
T 3tqs_A 30 TDTLVEIGPGRGALTDYLLTE--C-DNLALVEIDRDLVAFLQKKYNQ--Q---KNITIYQNDALQFDFSSVKTDKPLRVV 101 (255)
T ss_dssp TCEEEEECCTTTTTHHHHTTT--S-SEEEEEECCHHHHHHHHHHHTT--C---TTEEEEESCTTTCCGGGSCCSSCEEEE
T ss_pred cCEEEEEcccccHHHHHHHHh--C-CEEEEEECCHHHHHHHHHHHhh--C---CCcEEEEcchHhCCHHHhccCCCeEEE
Confidence 558999999999999999984 4 6899999999999999999874 2 4789999999876 3222 2468854
Q ss_pred eeCCCCCChHhHHHHHH
Q 047386 199 DLDPYGSPSVFLDSAIQ 215 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~ 215 (581)
--=||.-.++.+...+.
T Consensus 102 ~NlPY~is~~il~~ll~ 118 (255)
T 3tqs_A 102 GNLPYNISTPLLFHLFS 118 (255)
T ss_dssp EECCHHHHHHHHHHHHH
T ss_pred ecCCcccCHHHHHHHHh
Confidence 44456544566654443
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.23 E-value=3.4e-05 Score=78.20 Aligned_cols=96 Identities=11% Similarity=0.001 Sum_probs=64.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHH-HHhCCCCCCcEEEE--ehhHHHHHhhCCCcccE
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNI-KFNGSVACSKVESH--LADARVYMLTHPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni-~~N~~~~~~~v~v~--~~DA~~~l~~~~~~fDv 197 (581)
.+.+|||+-||+|.++..++.. .+|+++|+++.+ ..++++. ..+... .+++++ ++|+..+- ...||+
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~m~-~~a~~~~~~~~~~~--~~v~~~~~~~D~~~l~---~~~fD~ 151 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYTLG-TSGHEKPRLVETFG--WNLITFKSKVDVTKME---PFQADT 151 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS----TTEEEEEEECCC-CTTSCCCCCCCCTT--GGGEEEECSCCGGGCC---CCCCSE
T ss_pred CCCEEEEeccCCCHHHHHHHHc----CCEEEEECchhh-hhhhhchhhhhhcC--CCeEEEeccCcHhhCC---CCCcCE
Confidence 3569999999999999999874 479999999831 1111110 000110 157888 89987642 468999
Q ss_pred EeeCCC-CCCh---------HhHHHHHHhccCCC--eEEEE
Q 047386 198 VDLDPY-GSPS---------VFLDSAIQSVADGG--MLMCT 226 (581)
Q Consensus 198 IdLDPy-Gs~~---------~fld~A~~~l~~gG--lL~vT 226 (581)
|+.|-- .++. ..|..+.+.|++|| .+++.
T Consensus 152 Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~ 192 (276)
T 2wa2_A 152 VLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVK 192 (276)
T ss_dssp EEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEE
T ss_pred EEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEE
Confidence 999952 2221 24566678899999 87774
No 274
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.17 E-value=3.1e-05 Score=77.97 Aligned_cols=95 Identities=13% Similarity=0.025 Sum_probs=63.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHH-HhCCCCCCcEEEE--ehhHHHHHhhCCCcccEE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIK-FNGSVACSKVESH--LADARVYMLTHPKEFDVV 198 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~-~N~~~~~~~v~v~--~~DA~~~l~~~~~~fDvI 198 (581)
+.+|||+-||+|.++..++.. .+|+++|+++.+ ..++++.. .+... .++.++ ++|+..+- ...||+|
T Consensus 75 g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~m~-~~a~~~~~~~~~~~--~~v~~~~~~~D~~~l~---~~~fD~V 144 (265)
T 2oxt_A 75 TGRVVDLGCGRGGWSYYAASR----PHVMDVRAYTLG-VGGHEVPRITESYG--WNIVKFKSRVDIHTLP---VERTDVI 144 (265)
T ss_dssp CEEEEEESCTTSHHHHHHHTS----TTEEEEEEECCC-CSSCCCCCCCCBTT--GGGEEEECSCCTTTSC---CCCCSEE
T ss_pred CCEEEEeCcCCCHHHHHHHHc----CcEEEEECchhh-hhhhhhhhhhhccC--CCeEEEecccCHhHCC---CCCCcEE
Confidence 569999999999999998873 579999999832 11111100 00000 156788 89987642 4689999
Q ss_pred eeCCC-CCCh---------HhHHHHHHhccCCC--eEEEE
Q 047386 199 DLDPY-GSPS---------VFLDSAIQSVADGG--MLMCT 226 (581)
Q Consensus 199 dLDPy-Gs~~---------~fld~A~~~l~~gG--lL~vT 226 (581)
+.|-- .++. ..|..+.+.|++|| .+++.
T Consensus 145 ~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~k 184 (265)
T 2oxt_A 145 MCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVK 184 (265)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred EEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEE
Confidence 99952 2221 14566678899999 87774
No 275
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.14 E-value=0.00047 Score=70.38 Aligned_cols=104 Identities=19% Similarity=0.130 Sum_probs=80.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcC--C--ccEEEEEeCCH--------------------------HHHHHHHHHHHHhCC
Q 047386 122 PPRVLEALSASGLRALRYAREVE--G--IGQVVALDNDK--------------------------ASVEACRRNIKFNGS 171 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~--G--a~~V~anD~s~--------------------------~Ave~i~~Ni~~N~~ 171 (581)
+..|||+-.+.|.-++.++.-++ | -.+|+++|... ..++.+++|++..|+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 55899999999998888765332 1 35699999641 136778999999998
Q ss_pred CCCCcEEEEehhHHHHHhhC-CCcccEEeeCC--CCCChHhHHHHHHhccCCCeEEEE
Q 047386 172 VACSKVESHLADARVYMLTH-PKEFDVVDLDP--YGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 172 ~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLDP--yGs~~~fld~A~~~l~~gGlL~vT 226 (581)
. .++|+++.||+...|... ..+||+|+||- |.+...+++.....|++||+|++-
T Consensus 187 ~-~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiIv~D 243 (282)
T 2wk1_A 187 L-DEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYVIVD 243 (282)
T ss_dssp C-STTEEEEESCHHHHSTTCCCCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred C-cCceEEEEeCHHHHHhhCCCCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEEEEc
Confidence 3 268999999999988765 36899999996 333346788888999999999874
No 276
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.11 E-value=0.00032 Score=75.25 Aligned_cols=94 Identities=21% Similarity=0.163 Sum_probs=69.3
Q ss_pred CCCeEEEecCc------ccHHHHHHhhhc-CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH--Hh--
Q 047386 121 KPPRVLEALSA------SGLRALRYAREV-EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY--ML-- 189 (581)
Q Consensus 121 ~~~~VLDafsg------SG~rgIr~a~E~-~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~--l~-- 189 (581)
.+.+|||+-|| ||..+++++++. ++ .+|+++|+|+... .. ..+++++++|+..+ +.
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~-a~V~GVDiSp~m~---------~~---~~rI~fv~GDa~dlpf~~~l 282 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPR-GQIYGLDIMDKSH---------VD---ELRIRTIQGDQNDAEFLDRI 282 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTT-CEEEEEESSCCGG---------GC---BTTEEEEECCTTCHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCC-CEEEEEECCHHHh---------hc---CCCcEEEEecccccchhhhh
Confidence 46799999999 899999999864 44 4899999999862 11 15799999998653 31
Q ss_pred -hCCCcccEEeeCCCCC---ChHhHHHHHHhccCCCeEEEEe
Q 047386 190 -THPKEFDVVDLDPYGS---PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 190 -~~~~~fDvIdLDPyGs---~~~fld~A~~~l~~gGlL~vTa 227 (581)
.....||+|+.|=.-. ...++....+.|++||+|++.-
T Consensus 283 ~~~d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 283 ARRYGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHHHCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred hcccCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 1125799999883111 1345677788999999999973
No 277
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=97.00 E-value=0.00046 Score=71.12 Aligned_cols=96 Identities=21% Similarity=0.179 Sum_probs=70.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.+++..+++ +++.+|+ +..+. +++++..++. +++++..+|++.- .. .||+|++-
T Consensus 185 ~~~vLDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~--~~~~~~~~~~--~~v~~~~~d~~~~---~p-~~D~v~~~ 254 (348)
T 3lst_A 185 TGTVADVGGGRGGFLLTVLREHPGL-QGVLLDR-AEVVA--RHRLDAPDVA--GRWKVVEGDFLRE---VP-HADVHVLK 254 (348)
T ss_dssp SEEEEEETCTTSHHHHHHHHHCTTE-EEEEEEC-HHHHT--TCCCCCGGGT--TSEEEEECCTTTC---CC-CCSEEEEE
T ss_pred CceEEEECCccCHHHHHHHHHCCCC-EEEEecC-HHHhh--cccccccCCC--CCeEEEecCCCCC---CC-CCcEEEEe
Confidence 4589999999999999999976654 6899999 44443 4444444443 5799999998622 23 89999874
Q ss_pred C-C---CCC--hHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSP--SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~--~~fld~A~~~l~~gGlL~vTa 227 (581)
- . ..+ ..+|..+.++|++||.|+|.-
T Consensus 255 ~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e 286 (348)
T 3lst_A 255 RILHNWGDEDSVRILTNCRRVMPAHGRVLVID 286 (348)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEE
T ss_pred hhccCCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 1 112 367788889999999998864
No 278
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=96.92 E-value=0.0037 Score=62.60 Aligned_cols=120 Identities=18% Similarity=0.095 Sum_probs=80.2
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh-hHHHHHhhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA-DARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~-DA~~~l~~~~~~fDvIdL 200 (581)
+.+|||+-|+.|.++-.++.. .|+.+|+++|+-..-.+.= ..++..|. ..|++.++ |++.+- ...||+|..
T Consensus 79 g~~VvDLGaapGGWSq~~a~~-~g~~~V~avdvG~~ghe~P-~~~~s~gw---n~v~fk~gvDv~~~~---~~~~Dtllc 150 (267)
T 3p8z_A 79 EGRVIDLGCGRGGWSYYCAGL-KKVTEVRGYTKGGPGHEEP-VPMSTYGW---NIVKLMSGKDVFYLP---PEKCDTLLC 150 (267)
T ss_dssp CEEEEEESCTTSHHHHHHHTS-TTEEEEEEECCCSTTSCCC-CCCCCTTT---TSEEEECSCCGGGCC---CCCCSEEEE
T ss_pred CCEEEEcCCCCCcHHHHHHHh-cCCCEEEEEecCCCCccCc-chhhhcCc---CceEEEeccceeecC---CccccEEEE
Confidence 458999999999999988886 6999999999986543100 00011122 35788888 873332 367999988
Q ss_pred CC-CCCChHhHHHH---------HHhccCCCeEEEEeccchhhcCCCcch------hhhhccCccCCCccc
Q 047386 201 DP-YGSPSVFLDSA---------IQSVADGGMLMCTATDMAVLCGGNGEV------CYSKYGSYPLRGKYC 255 (581)
Q Consensus 201 DP-yGs~~~fld~A---------~~~l~~gGlL~vTaTD~a~Lcg~~~~~------c~rkYG~~~~k~~~~ 255 (581)
|= ..++.+.+|.+ -+.|++ |-+|+- +||+..|+. +.++||+.-.+.+++
T Consensus 151 DIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~K-----Vl~py~p~v~e~l~~lq~~fgg~lVR~P~S 215 (267)
T 3p8z_A 151 DIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIK-----VLNPYMPTVIEHLERLQRKHGGMLVRNPLS 215 (267)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEE-----ESCCCSHHHHHHHHHHHHHHCCEEECCTTS
T ss_pred ecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEE-----EccCCChhHHHHHHHHHHHhCCEeEeCCCC
Confidence 83 37787777652 255676 666664 788877543 566777765544443
No 279
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=96.89 E-value=0.00072 Score=69.34 Aligned_cols=93 Identities=12% Similarity=0.058 Sum_probs=62.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeC----CHHHHHHHHHHHHHhCCCCCCcEEEEeh-hHHHHHhhCCCccc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDN----DKASVEACRRNIKFNGSVACSKVESHLA-DARVYMLTHPKEFD 196 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~----s~~Ave~i~~Ni~~N~~~~~~~v~v~~~-DA~~~l~~~~~~fD 196 (581)
+.+|||+.||+|.++..++.. .+|+++|+ ++..++.+. .+... ...+.+.++ |+..+- ...||
T Consensus 83 g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~----~~~~~-~~~v~~~~~~D~~~l~---~~~fD 150 (305)
T 2p41_A 83 EGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP----MSTYG-WNLVRLQSGVDVFFIP---PERCD 150 (305)
T ss_dssp CEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC----CCSTT-GGGEEEECSCCTTTSC---CCCCS
T ss_pred CCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH----hhhcC-CCCeEEEeccccccCC---cCCCC
Confidence 569999999999999998874 36999999 443222111 11110 136888888 886542 35899
Q ss_pred EEeeCC-C--CCCh-------HhHHHHHHhccCCCeEEEE
Q 047386 197 VVDLDP-Y--GSPS-------VFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 197 vIdLDP-y--Gs~~-------~fld~A~~~l~~gGlL~vT 226 (581)
+|+.|- + |... ..|..+.+.|++||.+++.
T Consensus 151 ~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 151 TLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp EEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 999994 2 2211 2455566899999988874
No 280
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.87 E-value=0.0011 Score=65.94 Aligned_cols=48 Identities=17% Similarity=0.147 Sum_probs=41.1
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCC
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGS 171 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~ 171 (581)
.+..|||.|||||..++.+++. | .+++++|+++.+++.+++|++.|++
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~~--g-r~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKKL--G-RNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCEEEECCCCCCHHHHHHHHc--C-CeEEEEeCCHHHHHHHHHHHHhccC
Confidence 4668999999999999999884 5 5799999999999999999998775
No 281
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=96.87 E-value=0.00088 Score=68.68 Aligned_cols=72 Identities=22% Similarity=0.152 Sum_probs=56.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccE--EEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC---CCccc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQ--VVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH---PKEFD 196 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~--V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~---~~~fD 196 (581)
..+|||+|||.|++++-+.+ .|... |+++|+|+.|++..+.|.. + ..++++|+..+.... ...+|
T Consensus 16 ~~~vidLFaG~GG~~~g~~~--aG~~~~~v~a~E~d~~a~~ty~~N~~--~------~~~~~~DI~~i~~~~i~~~~~~D 85 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKD--LGIQVDRYIASEVCEDSITVGMVRHQ--G------KIMYVGDVRSVTQKHIQEWGPFD 85 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHH--TTBCEEEEEEECCCHHHHHHHHHHTT--T------CEEEECCGGGCCHHHHHHTCCCS
T ss_pred CCEEEEeCcCccHHHHHHHH--CCCccceEEEEECCHHHHHHHHHhCC--C------CceeCCChHHccHHHhcccCCcC
Confidence 56899999999999988877 48777 7999999999999988852 1 246788887654321 13689
Q ss_pred EEeeCCC
Q 047386 197 VVDLDPY 203 (581)
Q Consensus 197 vIdLDPy 203 (581)
+|...|+
T Consensus 86 ll~ggpP 92 (295)
T 2qrv_A 86 LVIGGSP 92 (295)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9999985
No 282
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=96.63 E-value=0.0016 Score=66.29 Aligned_cols=69 Identities=16% Similarity=0.136 Sum_probs=55.0
Q ss_pred eEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCCC
Q 047386 124 RVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDPY 203 (581)
Q Consensus 124 ~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDPy 203 (581)
+|||+|||.|++++-+-. .|.+-|+++|+|+.|+++.+.|.. . .++++|...+-...-...|+|..-|+
T Consensus 2 kvidLFsG~GG~~~G~~~--aG~~~v~a~e~d~~a~~ty~~N~~-------~--~~~~~DI~~i~~~~~~~~D~l~ggpP 70 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQK--AGFRIICANEYDKSIWKTYESNHS-------A--KLIKGDISKISSDEFPKCDGIIGGPP 70 (331)
T ss_dssp EEEEESCTTCHHHHHHHH--TTCEEEEEEECCTTTHHHHHHHCC-------S--EEEESCGGGCCGGGSCCCSEEECCCC
T ss_pred eEEEeCcCccHHHHHHHH--CCCEEEEEEeCCHHHHHHHHHHCC-------C--CcccCChhhCCHhhCCcccEEEecCC
Confidence 699999999998886655 488999999999999999998842 1 56789987764433346899998885
No 283
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=96.52 E-value=0.0052 Score=62.24 Aligned_cols=47 Identities=13% Similarity=0.149 Sum_probs=41.8
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhC
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNG 170 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~ 170 (581)
.+..|||+|||||..++.+++. | .+++++|+|+.+++.+++|++...
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g-~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--G-RRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCEEEECCCCCCHHHHHHHHc--C-CeEEEEeCCHHHHHHHHHHHHHhc
Confidence 4679999999999999999884 5 479999999999999999998653
No 284
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.47 E-value=0.0027 Score=69.39 Aligned_cols=75 Identities=19% Similarity=0.123 Sum_probs=56.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-----------
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT----------- 190 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~----------- 190 (581)
..++||+|||.|++++-+.. .|...|+++|+|+.|++..+.|..... ...++++|+..+...
T Consensus 88 ~~~viDLFaG~GGlslG~~~--aG~~~v~avE~d~~A~~ty~~N~~~~p-----~~~~~~~DI~~i~~~~~~~~~~~~~~ 160 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFES--IGGQCVFTSEWNKHAVRTYKANHYCDP-----ATHHFNEDIRDITLSHQEGVSDEAAA 160 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHT--TTEEEEEEECCCHHHHHHHHHHSCCCT-----TTCEEESCTHHHHCTTCTTSCHHHHH
T ss_pred cceEEEecCCccHHHHHHHH--CCCEEEEEEeCCHHHHHHHHHhcccCC-----CcceeccchhhhhhccccccchhhHH
Confidence 45899999999999988876 488889999999999999998863111 124677898877521
Q ss_pred -----CCCcccEEeeCCC
Q 047386 191 -----HPKEFDVVDLDPY 203 (581)
Q Consensus 191 -----~~~~fDvIdLDPy 203 (581)
....+|+|..-|+
T Consensus 161 ~~i~~~~~~~Dvl~gGpP 178 (482)
T 3me5_A 161 EHIRQHIPEHDVLLAGFP 178 (482)
T ss_dssp HHHHHHSCCCSEEEEECC
T ss_pred hhhhhcCCCCCEEEecCC
Confidence 1135677777775
No 285
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=96.44 E-value=0.0015 Score=67.95 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=53.9
Q ss_pred CeEEEecCcccHHHHHHhhhcCCc--cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC--CCcccEE
Q 047386 123 PRVLEALSASGLRALRYAREVEGI--GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH--PKEFDVV 198 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga--~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~--~~~fDvI 198 (581)
.++||+|||.|++++-+... |. +.|+++|+|+.|++..+.|... ..++++|+..+.... ...+|+|
T Consensus 4 ~~~idLFaG~GG~~~G~~~a--G~~~~~v~a~e~d~~a~~ty~~N~~~--------~~~~~~DI~~~~~~~~~~~~~D~l 73 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKES--GLDGEIVAAVDINTVANSVYKHNFPE--------TNLLNRNIQQLTPQVIKKWNVDTI 73 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHH--TCSEEEEEEECCCHHHHHHHHHHCTT--------SCEECCCGGGCCHHHHHHTTCCEE
T ss_pred CEEEEECcCccHHHHHHHHc--CCCceEEEEEeCCHHHHHHHHHhCCC--------CceeccccccCCHHHhccCCCCEE
Confidence 47999999999999887763 65 7799999999999999988741 135567776543221 1258999
Q ss_pred eeCCC
Q 047386 199 DLDPY 203 (581)
Q Consensus 199 dLDPy 203 (581)
...|+
T Consensus 74 ~ggpP 78 (333)
T 4h0n_A 74 LMSPP 78 (333)
T ss_dssp EECCC
T ss_pred EecCC
Confidence 99986
No 286
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=96.36 E-value=0.0064 Score=62.19 Aligned_cols=81 Identities=20% Similarity=0.244 Sum_probs=62.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH---HhhCC-CcccE
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY---MLTHP-KEFDV 197 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~---l~~~~-~~fDv 197 (581)
+..+||+-+|.|+-+...+.. + .+|+++|.|+.|++..++ ++. ++++++++|...+ |...+ .+||.
T Consensus 23 gg~~VD~T~G~GGHS~~il~~--~-g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~L~~~g~~~vDg 92 (285)
T 1wg8_A 23 GGVYVDATLGGAGHARGILER--G-GRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRHLAALGVERVDG 92 (285)
T ss_dssp TCEEEETTCTTSHHHHHHHHT--T-CEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHHHHHTTCSCEEE
T ss_pred CCEEEEeCCCCcHHHHHHHHC--C-CEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHHHHHcCCCCcCE
Confidence 458999999999999999884 3 489999999999999887 532 3789999988655 54433 47999
Q ss_pred EeeCCCCCChHhHHHH
Q 047386 198 VDLDPYGSPSVFLDSA 213 (581)
Q Consensus 198 IdLDPyGs~~~fld~A 213 (581)
|.+|+ |-.++.+|.+
T Consensus 93 IL~DL-GvSS~Qld~~ 107 (285)
T 1wg8_A 93 ILADL-GVSSFHLDDP 107 (285)
T ss_dssp EEEEC-SCCHHHHHCG
T ss_pred EEeCC-cccccccccc
Confidence 99998 3234556643
No 287
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=96.30 E-value=0.0048 Score=63.48 Aligned_cols=91 Identities=15% Similarity=0.169 Sum_probs=68.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...++. +|+++|+ +..++.+++ . .++++..+|++.-+ . .||+|++-
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~------~---~~v~~~~~d~~~~~---p-~~D~v~~~ 253 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETFPKL-KCIVFDR-PQVVENLSG------S---NNLTYVGGDMFTSI---P-NADAVLLK 253 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCC------B---TTEEEEECCTTTCC---C-CCSEEEEE
T ss_pred CceEEEeCCCccHHHHHHHHHCCCC-eEEEeeC-HHHHhhccc------C---CCcEEEeccccCCC---C-CccEEEee
Confidence 4699999999999999999876665 6999999 988876654 1 24889999986522 2 49999864
Q ss_pred C-C---CCCh--HhHHHHHHhccC---CCeEEEEe
Q 047386 202 P-Y---GSPS--VFLDSAIQSVAD---GGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~--~fld~A~~~l~~---gGlL~vTa 227 (581)
- . ..+. .++..+.++|++ ||.|++.-
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 288 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIID 288 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEE
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 2 1 1122 677778899999 99988863
No 288
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=96.29 E-value=0.0022 Score=66.56 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=52.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCc--cEE-EEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC--CCccc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGI--GQV-VALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH--PKEFD 196 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga--~~V-~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~--~~~fD 196 (581)
..++||+|||.|++++-+.. .|. +.| +++|+|+.|++..+.|.... ++++|+..+.... ...+|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~--aG~~~~~v~~a~e~d~~a~~ty~~N~~~~---------~~~~DI~~~~~~~i~~~~~D 78 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYER--SSININATFIPFDINEIANKIYSKNFKEE---------VQVKNLDSISIKQIESLNCN 78 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHH--SSCCCCEEEEEECCCHHHHHHHHHHHCCC---------CBCCCTTTCCHHHHHHTCCC
T ss_pred CCEEEEECCChhHHHHHHHH--cCCCceEEEEEEECCHHHHHHHHHHCCCC---------cccCChhhcCHHHhccCCCC
Confidence 35899999999999988776 364 778 89999999999999997421 3455654432210 12689
Q ss_pred EEeeCCC
Q 047386 197 VVDLDPY 203 (581)
Q Consensus 197 vIdLDPy 203 (581)
+|...|+
T Consensus 79 il~ggpP 85 (327)
T 3qv2_A 79 TWFMSPP 85 (327)
T ss_dssp EEEECCC
T ss_pred EEEecCC
Confidence 9999986
No 289
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=96.27 E-value=0.0064 Score=63.01 Aligned_cols=97 Identities=15% Similarity=0.140 Sum_probs=73.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
..+|||+-||+|..++..++..|++ +++..|. |..++.+++++...+. ++|++..+|.+.. ....+|+|++=
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~p~~-~~~~~dl-p~v~~~a~~~~~~~~~---~rv~~~~gD~~~~---~~~~~D~~~~~ 251 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLYPGC-KITVFDI-PEVVWTAKQHFSFQEE---EQIDFQEGDFFKD---PLPEADLYILA 251 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCSSC-EEEEEEC-HHHHHHHHHHSCC--C---CSEEEEESCTTTS---CCCCCSEEEEE
T ss_pred CCeEEeeCCCCCHHHHHHHHhCCCc-eeEeccC-HHHHHHHHHhhhhccc---CceeeecCccccC---CCCCceEEEee
Confidence 3489999999999999999988876 5778887 8899999998875543 5899999997542 23468998762
Q ss_pred C--CCC----ChHhHHHHHHhccCCCeEEEE
Q 047386 202 P--YGS----PSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 202 P--yGs----~~~fld~A~~~l~~gGlL~vT 226 (581)
= ... ...+|..+.++|++||.|+|.
T Consensus 252 ~vlh~~~d~~~~~iL~~~~~al~pgg~lli~ 282 (353)
T 4a6d_A 252 RVLHDWADGKCSHLLERIYHTCKPGGGILVI 282 (353)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred eecccCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 2 111 235677888999999987775
No 290
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=96.13 E-value=0.0046 Score=64.21 Aligned_cols=91 Identities=15% Similarity=0.138 Sum_probs=68.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...+++ .++.+|+ +..++.+++ . .++++..+|++.- ... ||+|++-
T Consensus 210 ~~~vLDvG~G~G~~~~~l~~~~~~~-~~~~~D~-~~~~~~a~~------~---~~v~~~~~d~~~~---~~~-~D~v~~~ 274 (372)
T 1fp1_D 210 ISTLVDVGGGSGRNLELIISKYPLI-KGINFDL-PQVIENAPP------L---SGIEHVGGDMFAS---VPQ-GDAMILK 274 (372)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCC------C---TTEEEEECCTTTC---CCC-EEEEEEE
T ss_pred CCEEEEeCCCCcHHHHHHHHHCCCC-eEEEeCh-HHHHHhhhh------c---CCCEEEeCCcccC---CCC-CCEEEEe
Confidence 4699999999999999999876654 6899999 888876553 1 2588999998752 233 9999864
Q ss_pred C-C---CCCh--HhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y---GSPS--VFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~--~fld~A~~~l~~gGlL~vTa 227 (581)
- . ..+. .+|..+.++|++||.|+|.-
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e 306 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNGKVIIVE 306 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 3 1 1122 67788889999999998863
No 291
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.05 E-value=0.0062 Score=62.66 Aligned_cols=104 Identities=15% Similarity=0.077 Sum_probs=68.7
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh-hHHHHHhhCCCcccEEee
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA-DARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~-DA~~~l~~~~~~fDvIdL 200 (581)
+.+|||+-|++|.++-.++.. .||.+|+++|+-..-.+.= ..++..+- ..|.+..+ |++.+- ...+|+|..
T Consensus 95 ~~~VlDLGaapGGwsq~~~~~-~gv~~V~avdvG~~~he~P-~~~~ql~w---~lV~~~~~~Dv~~l~---~~~~D~ivc 166 (321)
T 3lkz_A 95 VGKVIDLGCGRGGWCYYMATQ-KRVQEVRGYTKGGPGHEEP-QLVQSYGW---NIVTMKSGVDVFYRP---SECCDTLLC 166 (321)
T ss_dssp CEEEEEETCTTCHHHHHHTTC-TTEEEEEEECCCSTTSCCC-CCCCBTTG---GGEEEECSCCTTSSC---CCCCSEEEE
T ss_pred CCEEEEeCCCCCcHHHHHHhh-cCCCEEEEEEcCCCCccCc-chhhhcCC---cceEEEeccCHhhCC---CCCCCEEEE
Confidence 448999999999999998886 7999999999986522100 00000111 23566666 763332 357999999
Q ss_pred CC-CCCChHhHHH---------HHHhccCC-CeEEEEeccchhhcCCCc
Q 047386 201 DP-YGSPSVFLDS---------AIQSVADG-GMLMCTATDMAVLCGGNG 238 (581)
Q Consensus 201 DP-yGs~~~fld~---------A~~~l~~g-GlL~vTaTD~a~Lcg~~~ 238 (581)
|= =.++.+.+|. |-+.|++| |-+|+- +||+..+
T Consensus 167 DigeSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~K-----Vl~pY~~ 210 (321)
T 3lkz_A 167 DIGESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVK-----VLCPYMP 210 (321)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEE-----ESCTTSH
T ss_pred ECccCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEE-----EcCCCCh
Confidence 96 4456666654 33667888 877774 7888544
No 292
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=95.97 E-value=0.0038 Score=62.29 Aligned_cols=83 Identities=10% Similarity=-0.012 Sum_probs=60.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccE--EEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH-HhhC---CCcc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQ--VVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY-MLTH---PKEF 195 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~--V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~-l~~~---~~~f 195 (581)
+.+|||+-||+|.++. +++ + .+ |+++|+|+.+++.+++|+..+ .+++++++|+..+ +... ....
T Consensus 22 ~~~VLEIG~G~G~lt~-l~~---~-~~~~v~avEid~~~~~~a~~~~~~~-----~~v~~i~~D~~~~~~~~~~~~~~~~ 91 (252)
T 1qyr_A 22 GQAMVEIGPGLAALTE-PVG---E-RLDQLTVIELDRDLAARLQTHPFLG-----PKLTIYQQDAMTFNFGELAEKMGQP 91 (252)
T ss_dssp TCCEEEECCTTTTTHH-HHH---T-TCSCEEEECCCHHHHHHHHTCTTTG-----GGEEEECSCGGGCCHHHHHHHHTSC
T ss_pred cCEEEEECCCCcHHHH-hhh---C-CCCeEEEEECCHHHHHHHHHHhccC-----CceEEEECchhhCCHHHhhcccCCc
Confidence 4589999999999999 543 3 45 999999999999999987632 3689999999764 2111 0123
Q ss_pred cEEeeC-CCCCChHhHHHHH
Q 047386 196 DVVDLD-PYGSPSVFLDSAI 214 (581)
Q Consensus 196 DvIdLD-PyGs~~~fld~A~ 214 (581)
|+|+-. ||.-+.+++..-+
T Consensus 92 ~~vvsNlPY~i~~~il~~ll 111 (252)
T 1qyr_A 92 LRVFGNLPYNISTPLMFHLF 111 (252)
T ss_dssp EEEEEECCTTTHHHHHHHHH
T ss_pred eEEEECCCCCccHHHHHHHH
Confidence 566666 5776667765444
No 293
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=95.87 E-value=0.0082 Score=61.15 Aligned_cols=101 Identities=13% Similarity=0.105 Sum_probs=67.2
Q ss_pred CeEEEecCcc--cHHHHHHhhhc-CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh--hC---CCc
Q 047386 123 PRVLEALSAS--GLRALRYAREV-EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML--TH---PKE 194 (581)
Q Consensus 123 ~~VLDafsgS--G~rgIr~a~E~-~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~--~~---~~~ 194 (581)
..|||+-||+ |..-.+.+.++ ++ .+|+.+|+|+..++..+.++..+.. .++.++++|+..+-. .+ ...
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~-arVv~VD~sp~mLa~Ar~~l~~~~~---~~~~~v~aD~~~~~~~l~~~~~~~~ 155 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPE-SRVVYVDNDPIVLTLSQGLLASTPE---GRTAYVEADMLDPASILDAPELRDT 155 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTT-CEEEEEECCHHHHHTTHHHHCCCSS---SEEEEEECCTTCHHHHHTCHHHHTT
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCC-CEEEEEeCChHHHHHHHHHhccCCC---CcEEEEEecccChhhhhcccccccc
Confidence 4799999997 33334444432 45 4799999999999999988864431 478999999876521 10 123
Q ss_pred cc-----EEeeCC---CCC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 195 FD-----VVDLDP---YGS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fD-----vIdLDP---yGs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
|| .|++-- |-. +...+....+.|++||+|.++.
T Consensus 156 ~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~ 200 (277)
T 3giw_A 156 LDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSI 200 (277)
T ss_dssp CCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEE
T ss_pred cCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEe
Confidence 55 233322 111 2356777788899999999974
No 294
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=95.70 E-value=0.0076 Score=62.74 Aligned_cols=91 Identities=15% Similarity=0.127 Sum_probs=67.8
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
..+|||+-||+|..++.+++..+++ +++.+|+ +..++.++++ .++++..+|++.-+ ... |+|++-
T Consensus 204 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~~~---p~~-D~v~~~ 268 (368)
T 3reo_A 204 LTTIVDVGGGTGAVASMIVAKYPSI-NAINFDL-PHVIQDAPAF---------SGVEHLGGDMFDGV---PKG-DAIFIK 268 (368)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC---------TTEEEEECCTTTCC---CCC-SEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCC-EEEEEeh-HHHHHhhhhc---------CCCEEEecCCCCCC---CCC-CEEEEe
Confidence 4589999999999999999987765 6899999 8877655431 36899999987522 223 998764
Q ss_pred C-CC-C----ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-YG-S----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-yG-s----~~~fld~A~~~l~~gGlL~vTa 227 (581)
= .. . ...+|..+.++|++||.|+|.-
T Consensus 269 ~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e 300 (368)
T 3reo_A 269 WICHDWSDEHCLKLLKNCYAALPDHGKVIVAE 300 (368)
T ss_dssp SCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 2 11 1 1256778889999999988864
No 295
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.68 E-value=0.0077 Score=59.81 Aligned_cols=52 Identities=17% Similarity=0.291 Sum_probs=39.4
Q ss_pred EEEEehhHHHHHhhCC-CcccEEeeCC-CCCC-----------------hHhHHHHHHhccCCCeEEEEec
Q 047386 177 VESHLADARVYMLTHP-KEFDVVDLDP-YGSP-----------------SVFLDSAIQSVADGGMLMCTAT 228 (581)
Q Consensus 177 v~v~~~DA~~~l~~~~-~~fDvIdLDP-yGs~-----------------~~fld~A~~~l~~gGlL~vTaT 228 (581)
.+++++|+..+|.... ..||+|++|| |+.. ...+..+.+.|++||.|+|...
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~~ 75 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFNT 75 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEcC
Confidence 4688999999987643 5799999998 6543 1234445678999999999863
No 296
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=95.64 E-value=0.0088 Score=60.59 Aligned_cols=82 Identities=16% Similarity=0.099 Sum_probs=58.4
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCcc---EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh-hCCC----
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIG---QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML-THPK---- 193 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~---~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~-~~~~---- 193 (581)
+.+|||+-||+|.+++.++.. +.. +|+++|+|+.+++.+++|. . .+++++++|+..+-. ....
T Consensus 43 ~~~VLEIG~G~G~lt~~La~~--~~~~~~~V~avDid~~~l~~a~~~~-----~--~~v~~i~~D~~~~~~~~~~~~~~~ 113 (279)
T 3uzu_A 43 GERMVEIGPGLGALTGPVIAR--LATPGSPLHAVELDRDLIGRLEQRF-----G--ELLELHAGDALTFDFGSIARPGDE 113 (279)
T ss_dssp TCEEEEECCTTSTTHHHHHHH--HCBTTBCEEEEECCHHHHHHHHHHH-----G--GGEEEEESCGGGCCGGGGSCSSSS
T ss_pred cCEEEEEccccHHHHHHHHHh--CCCcCCeEEEEECCHHHHHHHHHhc-----C--CCcEEEECChhcCChhHhcccccC
Confidence 568999999999999999985 322 2999999999999999993 1 468999999977522 1100
Q ss_pred cccEEeeC-CCCCChHhHHH
Q 047386 194 EFDVVDLD-PYGSPSVFLDS 212 (581)
Q Consensus 194 ~fDvIdLD-PyGs~~~fld~ 212 (581)
..+.|+-. ||.-.++++..
T Consensus 114 ~~~~vv~NlPY~iss~il~~ 133 (279)
T 3uzu_A 114 PSLRIIGNLPYNISSPLLFH 133 (279)
T ss_dssp CCEEEEEECCHHHHHHHHHH
T ss_pred CceEEEEccCccccHHHHHH
Confidence 12345555 56544566543
No 297
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=95.50 E-value=0.011 Score=61.61 Aligned_cols=91 Identities=12% Similarity=0.086 Sum_probs=67.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
..+|||+-||+|..++.+++..+++ +++..|+ +..++.++++ .++++..+|++.-+ ... |+|++-
T Consensus 202 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~~---------~~v~~~~~D~~~~~---p~~-D~v~~~ 266 (364)
T 3p9c_A 202 LGTLVDVGGGVGATVAAIAAHYPTI-KGVNFDL-PHVISEAPQF---------PGVTHVGGDMFKEV---PSG-DTILMK 266 (364)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTC-EEEEEEC-HHHHTTCCCC---------TTEEEEECCTTTCC---CCC-SEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHHHCCCC-eEEEecC-HHHHHhhhhc---------CCeEEEeCCcCCCC---CCC-CEEEeh
Confidence 4689999999999999999987765 5899999 7776654421 46899999987522 223 999763
Q ss_pred C-C-CC----ChHhHHHHHHhccCCCeEEEEe
Q 047386 202 P-Y-GS----PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 202 P-y-Gs----~~~fld~A~~~l~~gGlL~vTa 227 (581)
= . .. ...+|..+.++|++||.|+|.-
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e 298 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALPAHGKVVLVQ 298 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred HHhccCCHHHHHHHHHHHHHHcCCCCEEEEEE
Confidence 3 1 11 2356777889999999988853
No 298
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=95.49 E-value=0.0073 Score=55.28 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=60.9
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccEEe
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDVVD 199 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDvId 199 (581)
+.+|||+-+|+ +.+|+|+..++.+++++.. ++++.++|+..+-.. ....||+|+
T Consensus 13 g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~-------~~~~~~~d~~~~~~~~~~~~~fD~V~ 68 (176)
T 2ld4_A 13 GQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN-------EGRVSVENIKQLLQSAHKESSFDIIL 68 (176)
T ss_dssp TSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT-------TSEEEEEEGGGGGGGCCCSSCEEEEE
T ss_pred CCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc-------CcEEEEechhcCccccCCCCCEeEEE
Confidence 56899998775 1289999999999887642 357889998876431 246799998
Q ss_pred e-CCC----CCChHhHHHHHHhccCCCeEEEE
Q 047386 200 L-DPY----GSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 L-DPy----Gs~~~fld~A~~~l~~gGlL~vT 226 (581)
. .-. .....++..+.+.|++||.|++.
T Consensus 69 ~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~ 100 (176)
T 2ld4_A 69 SGLVPGSTTLHSAEILAEIARILRPGGCLFLK 100 (176)
T ss_dssp ECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred ECChhhhcccCHHHHHHHHHHHCCCCEEEEEE
Confidence 6 321 12467888889999999999995
No 299
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=95.42 E-value=0.017 Score=59.45 Aligned_cols=91 Identities=11% Similarity=0.080 Sum_probs=67.6
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+-||+|..++.++...++. ++++.|+ +..++.+++ . .++++..+|++.- .. .||+|++-
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~p~~-~~~~~D~-~~~~~~a~~------~---~~v~~~~~d~~~~---~~-~~D~v~~~ 258 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIFPHL-KCTVFDQ-PQVVGNLTG------N---ENLNFVGGDMFKS---IP-SADAVLLK 258 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHCTTS-EEEEEEC-HHHHSSCCC------C---SSEEEEECCTTTC---CC-CCSEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHCCCC-eEEEecc-HHHHhhccc------C---CCcEEEeCccCCC---CC-CceEEEEc
Confidence 4689999999999999999876654 6899999 777765543 2 2488999998752 22 49999864
Q ss_pred C-C---CCCh--HhHHHHHHhccC---CCeEEEEe
Q 047386 202 P-Y---GSPS--VFLDSAIQSVAD---GGMLMCTA 227 (581)
Q Consensus 202 P-y---Gs~~--~fld~A~~~l~~---gGlL~vTa 227 (581)
- + ..+. .+|..+.++|++ ||.|+|.-
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e 293 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIID 293 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 3 1 1122 677788899999 99888853
No 300
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.19 E-value=0.023 Score=58.34 Aligned_cols=56 Identities=11% Similarity=0.146 Sum_probs=42.7
Q ss_pred CcEEEEehhHHHHHhhC-CCcccEEeeCC-CCCC-----------------hHhHHHHHHhccCCCeEEEEeccc
Q 047386 175 SKVESHLADARVYMLTH-PKEFDVVDLDP-YGSP-----------------SVFLDSAIQSVADGGMLMCTATDM 230 (581)
Q Consensus 175 ~~v~v~~~DA~~~l~~~-~~~fDvIdLDP-yGs~-----------------~~fld~A~~~l~~gGlL~vTaTD~ 230 (581)
..+.++++|+..+|... ...||+|++|| |+.. .+.+..+.++|++||.|++...|.
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d~ 87 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFGGA 87 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEECCE
Confidence 46789999999988754 46799999998 6543 133455678899999999987443
No 301
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.16 E-value=0.022 Score=58.75 Aligned_cols=53 Identities=15% Similarity=0.197 Sum_probs=40.4
Q ss_pred cEEEE-ehhHHHHHhhCC-CcccEEeeCC-CCCC--------------hHhHHHHHHhccCCCeEEEEec
Q 047386 176 KVESH-LADARVYMLTHP-KEFDVVDLDP-YGSP--------------SVFLDSAIQSVADGGMLMCTAT 228 (581)
Q Consensus 176 ~v~v~-~~DA~~~l~~~~-~~fDvIdLDP-yGs~--------------~~fld~A~~~l~~gGlL~vTaT 228 (581)
...++ ++|+..+|.... ..||+|++|| |+.. .+.+..+.++|++||+|+|.+.
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 46788 999999987643 5799999998 6543 1334455688999999999863
No 302
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.16 E-value=0.023 Score=57.40 Aligned_cols=70 Identities=19% Similarity=0.287 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEeeCC-CCCCh----------------Hh-------HHHHHH
Q 047386 161 ACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDLDP-YGSPS----------------VF-------LDSAIQ 215 (581)
Q Consensus 161 ~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLDP-yGs~~----------------~f-------ld~A~~ 215 (581)
.+++|.+....-...+++++++|+..+|... ...||+|+.|| |.... .| +..+.+
T Consensus 6 ~~~~~~~~gd~~~~~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~r 85 (297)
T 2zig_A 6 KAKEAFSEGEKVSFGVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFR 85 (297)
T ss_dssp ---------------CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHhhhCccccccccCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHH
Confidence 3455555443322246789999999988654 36899999998 54211 12 345678
Q ss_pred hccCCCeEEEEeccc
Q 047386 216 SVADGGMLMCTATDM 230 (581)
Q Consensus 216 ~l~~gGlL~vTaTD~ 230 (581)
.|++||.|++...|.
T Consensus 86 vLk~~G~l~i~~~d~ 100 (297)
T 2zig_A 86 LLVPGGRLVIVVGDV 100 (297)
T ss_dssp HEEEEEEEEEEECCE
T ss_pred HcCCCcEEEEEECCC
Confidence 899999999987554
No 303
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.53 E-value=0.013 Score=60.24 Aligned_cols=62 Identities=15% Similarity=0.035 Sum_probs=51.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML 189 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~ 189 (581)
.+..|||.|||||.-++.+... | .+.+.+|+++.++++++++++..+.. ...++.|++.++.
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~~--g-r~~ig~e~~~~~~~~~~~r~~~~~~~----~~~~~~~~~~i~~ 313 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAERE--S-RKWISFEMKPEYVAASAFRFLDNNIS----EEKITDIYNRILN 313 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--T-CEEEEEESCHHHHHHHHGGGSCSCSC----HHHHHHHHHHHHT
T ss_pred CCCEEEECCCCCCHHHHHHHHc--C-CCEEEEeCCHHHHHHHHHHHHhcccc----hHHHHHHHHHHHc
Confidence 4668999999999999999874 4 57899999999999999998866543 4567888888875
No 304
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=94.51 E-value=0.065 Score=63.35 Aligned_cols=73 Identities=16% Similarity=0.200 Sum_probs=55.6
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCc-cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---------
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGI-GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--------- 190 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga-~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--------- 190 (581)
...++||+|||.|++++-+.. .|. .-|+++|+++.|++..+.|.- ...++++|+..++..
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~--AG~~~vv~avEid~~A~~ty~~N~p--------~~~~~~~DI~~l~~~~~~~di~~~ 608 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQ--AGISDTLWAIEMWDPAAQAFRLNNP--------GSTVFTEDCNILLKLVMAGETTNS 608 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHH--HTSEEEEEEECSSHHHHHHHHHHCT--------TSEEECSCHHHHHHHHHHTCSBCT
T ss_pred CCCeEEEeccCccHHHHHHHH--CCCCceEEEEECCHHHHHHHHHhCC--------CCccccccHHHHhhhccchhhhhh
Confidence 355899999999999887765 376 678999999999999988742 235788998776421
Q ss_pred ------CCCcccEEeeCCC
Q 047386 191 ------HPKEFDVVDLDPY 203 (581)
Q Consensus 191 ------~~~~fDvIdLDPy 203 (581)
....+|+|..-|+
T Consensus 609 ~~~~lp~~~~vDll~GGpP 627 (1002)
T 3swr_A 609 RGQRLPQKGDVEMLCGGPP 627 (1002)
T ss_dssp TCCBCCCTTTCSEEEECCC
T ss_pred hhhhcccCCCeeEEEEcCC
Confidence 0135799998885
No 305
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=94.17 E-value=0.085 Score=54.47 Aligned_cols=105 Identities=14% Similarity=0.101 Sum_probs=64.5
Q ss_pred CCeEEEecCcccHHHHHH---hhhcCCcc--EEEEEeCCH--------HHHHHHHHHHHHh--CCCCCC--cEEEEehhH
Q 047386 122 PPRVLEALSASGLRALRY---AREVEGIG--QVVALDNDK--------ASVEACRRNIKFN--GSVACS--KVESHLADA 184 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~---a~E~~Ga~--~V~anD~s~--------~Ave~i~~Ni~~N--~~~~~~--~v~v~~~DA 184 (581)
..+|||..-|||+-.+-. +.+...-. +.+.+|..+ .....+.+-+..+ ... .+ ...+..+||
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~-~~~v~L~l~~GDa 175 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYE-GERLSLKVLLGDA 175 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEE-CSSEEEEEEESCH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCcccc-CCcEEEEEEechH
Confidence 358999999999865443 33322122 345566532 1112222222211 011 12 346788999
Q ss_pred HHHHhhCC-CcccEEeeCCCCCC-------hHhHHHHHHhccCCCeEEEEe
Q 047386 185 RVYMLTHP-KEFDVVDLDPYGSP-------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 185 ~~~l~~~~-~~fDvIdLDPyGs~-------~~fld~A~~~l~~gGlL~vTa 227 (581)
...+.+.. .+||+|++|+|+.. ..++....+++++||.|...|
T Consensus 176 ~~~l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTYt 226 (308)
T 3vyw_A 176 RKRIKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSYS 226 (308)
T ss_dssp HHHGGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEESC
T ss_pred HHHHhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEEe
Confidence 99997753 47999999999652 267787788999999987643
No 306
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.12 E-value=0.061 Score=56.31 Aligned_cols=85 Identities=16% Similarity=0.169 Sum_probs=63.4
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH---HhhCC--Ccc
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY---MLTHP--KEF 195 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~---l~~~~--~~f 195 (581)
.+..++|+-.|.|+-+...+..+..-.+|+++|.|+.|++..+ ++ . .+++++++++...+ +...+ ..+
T Consensus 57 pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL-----~-~~Rv~lv~~nF~~l~~~L~~~g~~~~v 129 (347)
T 3tka_A 57 PDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI-----D-DPRFSIIHGPFSALGEYVAERDLIGKI 129 (347)
T ss_dssp TTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC-----C-CTTEEEEESCGGGHHHHHHHTTCTTCE
T ss_pred CCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh-----c-CCcEEEEeCCHHHHHHHHHhcCCCCcc
Confidence 3568999999999999999886544568999999999999884 33 1 25789998876544 44332 269
Q ss_pred cEEeeCCCCCChHhHHHH
Q 047386 196 DVVDLDPYGSPSVFLDSA 213 (581)
Q Consensus 196 DvIdLDPyGs~~~fld~A 213 (581)
|.|.+|- |-.++.||.+
T Consensus 130 DgILfDL-GVSS~QlD~~ 146 (347)
T 3tka_A 130 DGILLDL-GVSSPQLDDA 146 (347)
T ss_dssp EEEEEEC-SCCHHHHHCG
T ss_pred cEEEECC-ccCHHHhcCC
Confidence 9999997 3345777754
No 307
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=93.79 E-value=0.053 Score=62.01 Aligned_cols=58 Identities=14% Similarity=0.141 Sum_probs=45.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCC------ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHh
Q 047386 122 PPRVLEALSASGLRALRYAREVEG------IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYML 189 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~G------a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~ 189 (581)
..+|||+|||.|++++=+-.. | .+-|+++|+|+.|+++.+.|.- ...++++|+..++.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~A--G~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp--------~~~~~~~di~~i~~ 275 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLG--AALSGLKLETRWAVDFNSFACQSLKYNHP--------QTEVRNEKADEFLA 275 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHH--HHHHTEEEEEEEEEESCHHHHHHHHHHCT--------TSEEEESCHHHHHH
T ss_pred CCeEEEeCcCccHHHHHHHHh--CcccCCceeEEEEEeCCHHHHHHHHHHCC--------CCceecCcHHHhhh
Confidence 458999999999998766442 3 4678999999999999987743 23678888887653
No 308
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=93.59 E-value=0.14 Score=52.10 Aligned_cols=98 Identities=15% Similarity=0.088 Sum_probs=60.3
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||.|.++-.++.. .++..|++.|+..+........ ...+ .++..+++|+.. .......||+|..|
T Consensus 75 ~~~VLDLGaAPGGWSQvAa~~-~~~~~v~g~dVGvDl~~~pi~~-~~~g----~~ii~~~~~~dv-~~l~~~~~DlVlsD 147 (277)
T 3evf_A 75 EGRVIDLGCGRGGWCYYAAAQ-KEVSGVKGFTLGRDGHEKPMNV-QSLG----WNIITFKDKTDI-HRLEPVKCDTLLCD 147 (277)
T ss_dssp CEEEEEETCTTCHHHHHHHTS-TTEEEEEEECCCCTTCCCCCCC-CBTT----GGGEEEECSCCT-TTSCCCCCSEEEEC
T ss_pred CCEEEEecCCCCHHHHHHHHh-cCCCcceeEEEeccCccccccc-CcCC----CCeEEEecccee-hhcCCCCccEEEec
Confidence 448999999999999998875 4788899999874320000000 0001 133445555422 11224689999988
Q ss_pred C-CCCChHhH---------HHHHHhccCC-CeEEEE
Q 047386 202 P-YGSPSVFL---------DSAIQSVADG-GMLMCT 226 (581)
Q Consensus 202 P-yGs~~~fl---------d~A~~~l~~g-GlL~vT 226 (581)
= +-+....+ +-|.+.|++| |.+++-
T Consensus 148 ~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K 183 (277)
T 3evf_A 148 IGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK 183 (277)
T ss_dssp CCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE
Confidence 3 22443333 4466889999 998875
No 309
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=93.05 E-value=0.17 Score=61.41 Aligned_cols=73 Identities=18% Similarity=0.187 Sum_probs=55.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCc-cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh---------
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGI-GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--------- 190 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga-~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--------- 190 (581)
...++||+|||.|++++-+-. .|. ..|+++|+++.|++..+.|.- ...++++|+..++..
T Consensus 850 ~~l~viDLFsG~GGlslGfe~--AG~~~vv~avEid~~A~~ty~~N~p--------~~~~~~~DI~~l~~~~~~gdi~~~ 919 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQ--AGISETLWAIEMWDPAAQAFRLNNP--------GTTVFTEDCNVLLKLVMAGEVTNS 919 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHH--TTSEEEEEEECCSHHHHHHHHHHCT--------TSEEECSCHHHHHHHHTTTCSBCS
T ss_pred CCceEEecccCccHHHHHHHH--CCCCceEEEEECCHHHHHHHHHhCC--------CCcEeeccHHHHhHhhhccchhhh
Confidence 345899999999999987765 476 678999999999999988841 135778998876521
Q ss_pred ----C--CCcccEEeeCCC
Q 047386 191 ----H--PKEFDVVDLDPY 203 (581)
Q Consensus 191 ----~--~~~fDvIdLDPy 203 (581)
. ...+|+|.--|+
T Consensus 920 ~~~~lp~~~~vDvl~GGpP 938 (1330)
T 3av4_A 920 LGQRLPQKGDVEMLCGGPP 938 (1330)
T ss_dssp SCCBCCCTTTCSEEEECCC
T ss_pred hhhhccccCccceEEecCC
Confidence 0 124788888875
No 310
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=91.94 E-value=0.2 Score=52.96 Aligned_cols=68 Identities=12% Similarity=0.093 Sum_probs=51.9
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEee
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDL 200 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdL 200 (581)
.|.+|||+-|+.|+++-.++. +|+ +|+++|+.+-+- .+. .. .+|+++++|++.+... ...||+|+.
T Consensus 211 ~G~~vlDLGAaPGGWT~~l~~--rg~-~V~aVD~~~l~~-----~l~--~~---~~V~~~~~d~~~~~~~-~~~~D~vvs 276 (375)
T 4auk_A 211 NGMWAVDLGACPGGWTYQLVK--RNM-WVYSVDNGPMAQ-----SLM--DT---GQVTWLREDGFKFRPT-RSNISWMVC 276 (375)
T ss_dssp TTCEEEEETCTTCHHHHHHHH--TTC-EEEEECSSCCCH-----HHH--TT---TCEEEECSCTTTCCCC-SSCEEEEEE
T ss_pred CCCEEEEeCcCCCHHHHHHHH--CCC-EEEEEEhhhcCh-----hhc--cC---CCeEEEeCccccccCC-CCCcCEEEE
Confidence 578999999999999999887 464 799999875332 121 21 4689999999887643 357999998
Q ss_pred CC
Q 047386 201 DP 202 (581)
Q Consensus 201 DP 202 (581)
|=
T Consensus 277 Dm 278 (375)
T 4auk_A 277 DM 278 (375)
T ss_dssp CC
T ss_pred cC
Confidence 85
No 311
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=91.92 E-value=0.072 Score=49.67 Aligned_cols=83 Identities=13% Similarity=0.052 Sum_probs=54.4
Q ss_pred CCeEEEecCcccH-HHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEE-e
Q 047386 122 PPRVLEALSASGL-RALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVV-D 199 (581)
Q Consensus 122 ~~~VLDafsgSG~-rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvI-d 199 (581)
+.+|||+-+|+|. .|+..+.. .|. .|+++|+|+.|++ ++++|++.-....-+.||+| +
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~-~g~-~V~atDInp~Av~------------------~v~dDiF~P~~~~Y~~~DLIYs 95 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH-SKV-DLVLTDIKPSHGG------------------IVRDDITSPRMEIYRGAALIYS 95 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH-SCC-EEEEECSSCSSTT------------------EECCCSSSCCHHHHTTEEEEEE
T ss_pred CCcEEEEccCCChHHHHHHHHh-CCC-eEEEEECCccccc------------------eEEccCCCCcccccCCcCEEEE
Confidence 4599999999995 77777753 365 4999999999976 55667654322211379999 9
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+-|+---.+++-...+. -|.=|+|+
T Consensus 96 irPP~El~~~i~~lA~~--v~adliI~ 120 (153)
T 2k4m_A 96 IRPPAEIHSSLMRVADA--VGARLIIK 120 (153)
T ss_dssp ESCCTTTHHHHHHHHHH--HTCEEEEE
T ss_pred cCCCHHHHHHHHHHHHH--cCCCEEEE
Confidence 99975433333222222 24556665
No 312
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.71 E-value=0.16 Score=52.30 Aligned_cols=47 Identities=19% Similarity=0.216 Sum_probs=38.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCH---HHHHHHHHHHHHhC
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDK---ASVEACRRNIKFNG 170 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~---~Ave~i~~Ni~~N~ 170 (581)
.+..|||.|||||.-++.+... | .+.+.+|+++ ..+++++++++..+
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~~--~-r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQE--G-RNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHHH--T-CEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCEEEecCCCCCHHHHHHHHc--C-CcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 4668999999999999999885 4 5789999999 99999999987654
No 313
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=91.68 E-value=0.23 Score=55.85 Aligned_cols=106 Identities=13% Similarity=0.132 Sum_probs=72.4
Q ss_pred CCeEEEecCcccHHHHHHhhhc----------C-CccEEEEEeCCHHHHHHHHHHHHH------------h-------C-
Q 047386 122 PPRVLEALSASGLRALRYAREV----------E-GIGQVVALDNDKASVEACRRNIKF------------N-------G- 170 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~----------~-Ga~~V~anD~s~~Ave~i~~Ni~~------------N-------~- 170 (581)
..+|||..-|+|+-.|..+... + .--+++++|..|-..+.+++-+.. . |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4589999999999888775531 1 114689999977555555542211 1 1
Q ss_pred ----CCC-CCcEEEEehhHHHHHhhC----CCcccEEeeCCCCCC-------hHhHHHHHHhccCCCeEEEEe
Q 047386 171 ----SVA-CSKVESHLADARVYMLTH----PKEFDVVDLDPYGSP-------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 171 ----~~~-~~~v~v~~~DA~~~l~~~----~~~fDvIdLDPyGs~-------~~fld~A~~~l~~gGlL~vTa 227 (581)
++. .-.++++.|||...|.+. ...||.|+||+|... ..|+....+++++||.++..+
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTFT 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 110 015678899999999764 357999999998542 367777778889998877643
No 314
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=91.40 E-value=0.085 Score=53.81 Aligned_cols=97 Identities=15% Similarity=0.045 Sum_probs=59.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeC
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLD 201 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLD 201 (581)
+.+|||+.||.|.++-.++.+ .++..|+++|+........... +..+ .++.....++. +......+||+|.-|
T Consensus 91 ~~~VLDLGaAPGGWsQvAa~~-~gv~sV~GvdvG~d~~~~pi~~-~~~g----~~ii~~~~~~d-v~~l~~~~~DvVLSD 163 (282)
T 3gcz_A 91 TGIVVDLGCGRGGWSYYAASL-KNVKKVMAFTLGVQGHEKPIMR-TTLG----WNLIRFKDKTD-VFNMEVIPGDTLLCD 163 (282)
T ss_dssp CEEEEEETCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCCCCCC-CBTT----GGGEEEECSCC-GGGSCCCCCSEEEEC
T ss_pred CCEEEEeCCCCCHHHHHHHHh-cCCCeeeeEEeccCcccccccc-ccCC----CceEEeeCCcc-hhhcCCCCcCEEEec
Confidence 448999999999999999976 4789999999975421100000 0001 12223332211 111234689999888
Q ss_pred --CCCCChHhHH---------HHHHhccCC--CeEEEE
Q 047386 202 --PYGSPSVFLD---------SAIQSVADG--GMLMCT 226 (581)
Q Consensus 202 --PyGs~~~fld---------~A~~~l~~g--GlL~vT 226 (581)
|- +....+| -|.+.|++| |.+++-
T Consensus 164 mApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 164 IGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIK 200 (282)
T ss_dssp CCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred CccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEE
Confidence 54 5444444 456788888 887775
No 315
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=91.24 E-value=0.48 Score=50.22 Aligned_cols=60 Identities=8% Similarity=0.142 Sum_probs=48.1
Q ss_pred CCCeEEEecCcccHHHHHHh-hhcCCccEEEEEeCCHHHHHHHHHHHHH--hC-CCCCCcEEEEeh
Q 047386 121 KPPRVLEALSASGLRALRYA-REVEGIGQVVALDNDKASVEACRRNIKF--NG-SVACSKVESHLA 182 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a-~E~~Ga~~V~anD~s~~Ave~i~~Ni~~--N~-~~~~~~v~v~~~ 182 (581)
++..|+|+-|+.|..++.++ +..+...+|++.|-+|.+++.+++|++. |+ .+ .++++++.
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~--~~v~~~~~ 289 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFA--SRITVHGC 289 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTG--GGEEEECS
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCC--CCEEEEEe
Confidence 35689999999999999988 3322247999999999999999999999 53 41 36777654
No 316
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=91.10 E-value=1 Score=46.07 Aligned_cols=97 Identities=19% Similarity=0.151 Sum_probs=62.0
Q ss_pred CCCeEEEecCc-ccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHH-HHhhCCCc
Q 047386 121 KPPRVLEALSA-SGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARV-YMLTHPKE 194 (581)
Q Consensus 121 ~~~~VLDafsg-SG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~-~l~~~~~~ 194 (581)
.+.+||-.-+| .|..++.+|+. .|+..|++.|.++.-.+++++ .|.+ .+--.. .|... ++......
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~~~~~g 242 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKA-MGAAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEGQLGCK 242 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHHHhCCC
Confidence 45677764333 47777788886 588889999999998887753 4653 221111 22222 22211246
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+|+ |.-|. ...+..++++|++||.+.+..
T Consensus 243 ~D~vi-d~~g~-~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 243 PEVTI-ECTGA-EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp CSEEE-ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred CCEEE-ECCCC-hHHHHHHHHHhcCCCEEEEEe
Confidence 99884 66554 246778899999999987753
No 317
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=90.93 E-value=0.15 Score=54.49 Aligned_cols=45 Identities=9% Similarity=-0.091 Sum_probs=37.5
Q ss_pred CCeEEEecCcccHHHHHHhhhcCC--ccE----EEEEeCCHHHHHHHHHHHHH
Q 047386 122 PPRVLEALSASGLRALRYAREVEG--IGQ----VVALDNDKASVEACRRNIKF 168 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~G--a~~----V~anD~s~~Ave~i~~Ni~~ 168 (581)
..+|||+|||.|+.++-+-.- | .+- |.++|+|+.|++..+.|...
T Consensus 10 ~lrvldLFsGiGG~~~Gl~~a--G~~~~~~~~~v~avEid~~A~~ty~~n~~~ 60 (403)
T 4dkj_A 10 VIKVFEAFAGIGSQFKALKNI--ARSKNWEIQHSGMVEWFVDAIVSYVAIHSK 60 (403)
T ss_dssp EEEEEEETCTTCHHHHHHHHH--HHHHTEEEEEEEEECCBHHHHHHHHHHHCS
T ss_pred cceEEEEecCcCHHHHHHHHh--CCccccceeeEEEEecCHHHHHHHHHHcCC
Confidence 468999999999988877552 4 345 99999999999999999863
No 318
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=90.92 E-value=0.14 Score=52.54 Aligned_cols=97 Identities=13% Similarity=-0.014 Sum_probs=59.5
Q ss_pred CCCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh-hHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA-DARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~-DA~~~l~~~~~~fDvId 199 (581)
.+.+|||+.||.|.++-.++.. .|+..|+++|+.......... +...+. +.+.+..+ |++ ......||+|.
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~-~gv~sV~Gvdlg~~~~~~P~~-~~~~~~---~iv~~~~~~di~---~l~~~~~DlVl 152 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQ-KEVMSVKGYTLGIEGHEKPIH-MQTLGW---NIVKFKDKSNVF---TMPTEPSDTLL 152 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTS-TTEEEEEEECCCCTTSCCCCC-CCBTTG---GGEEEECSCCTT---TSCCCCCSEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHh-cCCceeeeEEecccccccccc-ccccCC---ceEEeecCceee---ecCCCCcCEEe
Confidence 3569999999999999999875 478899999997431000000 000010 12222222 322 11246899998
Q ss_pred eC--CCCCChHh---------HHHHHHhccCC-CeEEEE
Q 047386 200 LD--PYGSPSVF---------LDSAIQSVADG-GMLMCT 226 (581)
Q Consensus 200 LD--PyGs~~~f---------ld~A~~~l~~g-GlL~vT 226 (581)
.| |. +.... |+-|.+.|++| |.+++-
T Consensus 153 sD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 153 CDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVK 190 (300)
T ss_dssp ECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEE
T ss_pred ecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEE
Confidence 88 55 54444 44456789999 988775
No 319
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=90.56 E-value=0.49 Score=48.36 Aligned_cols=97 Identities=18% Similarity=0.168 Sum_probs=62.6
Q ss_pred CCCeEEEe-cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-C-CCcccE
Q 047386 121 KPPRVLEA-LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-H-PKEFDV 197 (581)
Q Consensus 121 ~~~~VLDa-fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~-~~~fDv 197 (581)
.+.+||-. -++.|..++.+|+. .|+.+|+++|.++...+++++ .|.+ .-+.....|....+.. . ...||+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~~~~~~~~~~----lGa~--~vi~~~~~~~~~~v~~~t~g~g~D~ 238 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGANH-LGAGRIFAVGSRKHCCDIALE----YGAT--DIINYKNGDIVEQILKATDGKGVDK 238 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHT-TTCSSEEEECCCHHHHHHHHH----HTCC--EEECGGGSCHHHHHHHHTTTCCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCcEEEEECCCHHHHHHHHH----hCCc--eEEcCCCcCHHHHHHHHcCCCCCCE
Confidence 35556544 23447777888886 588889999999998887754 4653 1111112333333322 2 346998
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
|+ |.-|.+ ..+..++++|++||.+.+.
T Consensus 239 v~-d~~g~~-~~~~~~~~~l~~~G~~v~~ 265 (352)
T 3fpc_A 239 VV-IAGGDV-HTFAQAVKMIKPGSDIGNV 265 (352)
T ss_dssp EE-ECSSCT-THHHHHHHHEEEEEEEEEC
T ss_pred EE-ECCCCh-HHHHHHHHHHhcCCEEEEe
Confidence 85 776653 5678889999999998765
No 320
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=90.00 E-value=0.13 Score=51.88 Aligned_cols=90 Identities=13% Similarity=0.025 Sum_probs=57.1
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCcc----EEEEEe--CCHHHHHHHHHHHHHhCCCCCCcEEEEeh-hHHHHHhhCCCc
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIG----QVVALD--NDKASVEACRRNIKFNGSVACSKVESHLA-DARVYMLTHPKE 194 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~----~V~anD--~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~-DA~~~l~~~~~~ 194 (581)
+.+|||+-||-|.++-.++.. .++. .|+++| +.|-.. +- .|+ +-+.+.++ |.+.+ ...+
T Consensus 74 g~~VVDLGaAPGGWSQvAa~~-~~vg~V~G~vig~D~~~~P~~~--~~-----~Gv---~~i~~~~G~Df~~~---~~~~ 139 (269)
T 2px2_A 74 IGKVVDLGCGRGGWSYYAATM-KNVQEVRGYTKGGPGHEEPMLM--QS-----YGW---NIVTMKSGVDVFYK---PSEI 139 (269)
T ss_dssp CEEEEEETCTTSHHHHHHTTS-TTEEEEEEECCCSTTSCCCCCC--CS-----TTG---GGEEEECSCCGGGS---CCCC
T ss_pred CCEEEEcCCCCCHHHHHHhhh-cCCCCceeEEEccccccCCCcc--cC-----CCc---eEEEeeccCCccCC---CCCC
Confidence 569999999999999999986 2343 456666 222110 00 121 23455657 88762 2458
Q ss_pred ccEEeeC--CCCCChHhHH---------HHHHhccCCC-eEEEE
Q 047386 195 FDVVDLD--PYGSPSVFLD---------SAIQSVADGG-MLMCT 226 (581)
Q Consensus 195 fDvIdLD--PyGs~~~fld---------~A~~~l~~gG-lL~vT 226 (581)
||+|.-| |- +....+| -|.+.|++|| -+++-
T Consensus 140 ~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 140 SDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp CSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 9999888 54 6544444 3557899999 77665
No 321
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.76 E-value=0.67 Score=46.98 Aligned_cols=97 Identities=25% Similarity=0.267 Sum_probs=62.9
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+||-.- ++.|..++.+|+. .|+ +|++.|.+++-.+.+++ .|.+ .-+.....|....+......+|+|+
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~--~~i~~~~~~~~~~~~~~~g~~d~vi 237 (340)
T 3s2e_A 166 PGQWVVISGIGGLGHVAVQYARA-MGL-RVAAVDIDDAKLNLARR----LGAE--VAVNARDTDPAAWLQKEIGGAHGVL 237 (340)
T ss_dssp TTSEEEEECCSTTHHHHHHHHHH-TTC-EEEEEESCHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHHSSEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHH----cCCC--EEEeCCCcCHHHHHHHhCCCCCEEE
Confidence 455666643 4458888899987 588 89999999998887754 5653 1111112243333332223689885
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.. -|. ...++.++++|+++|.+.+..
T Consensus 238 d~-~g~-~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 238 VT-AVS-PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp ES-SCC-HHHHHHHHHHEEEEEEEEECS
T ss_pred Ee-CCC-HHHHHHHHHHhccCCEEEEeC
Confidence 44 343 367788999999999987753
No 322
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.62 E-value=0.83 Score=46.97 Aligned_cols=97 Identities=18% Similarity=0.235 Sum_probs=63.0
Q ss_pred CCCeEEEecCcc-cHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEE
Q 047386 121 KPPRVLEALSAS-GLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafsgS-G~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvI 198 (581)
.+.+||-.-+|. |..++.+|+. .|+..|+++|.++...+++++ .|.+ .-+.....|....+.. ....||+|
T Consensus 190 ~g~~VlV~GaG~vG~~a~qlak~-~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~~~~~~~gg~D~v 262 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAAKV-CGASIIIAVDIVESRLELAKQ----LGAT--HVINSKTQDPVAAIKEITDGGVNFA 262 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHTTSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCCHHHHHHHHH----cCCC--EEecCCccCHHHHHHHhcCCCCcEE
Confidence 456777764443 6777888886 488889999999998888754 4543 1111112233333322 22379987
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|. ...+..++++|++||.+.+.
T Consensus 263 -id~~g~-~~~~~~~~~~l~~~G~iv~~ 288 (371)
T 1f8f_A 263 -LESTGS-PEILKQGVDALGILGKIAVV 288 (371)
T ss_dssp -EECSCC-HHHHHHHHHTEEEEEEEEEC
T ss_pred -EECCCC-HHHHHHHHHHHhcCCEEEEe
Confidence 466554 35678899999999998775
No 323
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=89.43 E-value=0.63 Score=52.02 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=69.5
Q ss_pred CCeEEEecCcccHHHHHHhhhc----------CC-ccEEEEEeC---CHHHHHHHH-----------HHHHHh-----CC
Q 047386 122 PPRVLEALSASGLRALRYAREV----------EG-IGQVVALDN---DKASVEACR-----------RNIKFN-----GS 171 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~----------~G-a~~V~anD~---s~~Ave~i~-----------~Ni~~N-----~~ 171 (581)
..+|||.--|||+-.+..+... +. --+++++|. +++-+..+- +-+..- ++
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 3589999999999888776542 11 135788999 555444111 111111 00
Q ss_pred -----CC-CCcEEEEehhHHHHHhhC----CCcccEEeeCCCCCC-------hHhHHHHHHhccCCCeEEEEe
Q 047386 172 -----VA-CSKVESHLADARVYMLTH----PKEFDVVDLDPYGSP-------SVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 172 -----~~-~~~v~v~~~DA~~~l~~~----~~~fDvIdLDPyGs~-------~~fld~A~~~l~~gGlL~vTa 227 (581)
+. .-.+++..+|+...|.+. ...||.|++|+|... ..++....+++++||.|+..+
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 00 023567889999999864 357999999999642 367777778899999887654
No 324
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=89.42 E-value=0.85 Score=47.35 Aligned_cols=97 Identities=22% Similarity=0.187 Sum_probs=62.1
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh-HHHHHhh--CCCccc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD-ARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D-A~~~l~~--~~~~fD 196 (581)
.+.+||-.- ++.|..++.+|+. .|+..|++.|.++.-.+++++ .|.+ .+.....| ....+.. ....+|
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~-~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~i~~~~~~~~~~~v~~~t~g~g~D 256 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARL-LGAAVVIVGDLNPARLAHAKA----QGFE---IADLSLDTPLHEQIAALLGEPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH----TTCE---EEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-CCCCeEEEEcCCHHHHHHHHH----cCCc---EEccCCcchHHHHHHHHhCCCCCC
Confidence 456777543 3447777888886 588899999999998888754 4541 11111122 2222221 234699
Q ss_pred EEeeCCCCCC--------------hHhHHHHHHhccCCCeEEEE
Q 047386 197 VVDLDPYGSP--------------SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 197 vIdLDPyGs~--------------~~fld~A~~~l~~gGlL~vT 226 (581)
+| +|.-|.+ ...+..++++|++||.+.+.
T Consensus 257 vv-id~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 257 CA-VDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp EE-EECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred EE-EECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 87 4665543 24688899999999988764
No 325
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.30 E-value=0.94 Score=46.79 Aligned_cols=98 Identities=17% Similarity=0.208 Sum_probs=64.7
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh----CCCcc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT----HPKEF 195 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~----~~~~f 195 (581)
.+.+||-.- ++.|..++.+|+. .|+..|++.|.++...+++++ .|.+ .-+.....|....+.. ....|
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~----lGa~--~vi~~~~~~~~~~i~~~~~~~~gg~ 254 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARL-AGATTVILSTRQATKRRLAEE----VGAT--ATVDPSAGDVVEAIAGPVGLVPGGV 254 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCHHHHHHHHH----HTCS--EEECTTSSCHHHHHHSTTSSSTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHH----cCCC--EEECCCCcCHHHHHHhhhhccCCCC
Confidence 355665432 4457778888886 589899999999998887765 5654 1111123454444432 12379
Q ss_pred cEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+| +|.-|. ...++.++++|++||.+.+..
T Consensus 255 Dvv-id~~G~-~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 255 DVV-IECAGV-AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp EEE-EECSCC-HHHHHHHHHHEEEEEEEEECS
T ss_pred CEE-EECCCC-HHHHHHHHHHhccCCEEEEEe
Confidence 987 466554 356788999999999987753
No 326
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=89.11 E-value=0.53 Score=49.09 Aligned_cols=97 Identities=21% Similarity=0.158 Sum_probs=62.0
Q ss_pred CCCeEEEecCcc-cHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH-HHHHhh--CCCccc
Q 047386 121 KPPRVLEALSAS-GLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA-RVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDafsgS-G~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA-~~~l~~--~~~~fD 196 (581)
.+.+||-.-+|. |..++.+|+. .|+.+|+++|.+++..+.+++ .|. +.+.....|. ...+.. ....||
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~----lGa---~~i~~~~~~~~~~~~~~~~~g~g~D 256 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQNPERLKLLSD----AGF---ETIDLRNSAPLRDQIDQILGKPEVD 256 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEESCHHHHHHHHT----TTC---EEEETTSSSCHHHHHHHHHSSSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHH----cCC---cEEcCCCcchHHHHHHHHhCCCCCC
Confidence 456787765443 7788888886 488889999999998887653 343 1111112232 222221 233699
Q ss_pred EEeeCCCCCC-------------hHhHHHHHHhccCCCeEEEE
Q 047386 197 VVDLDPYGSP-------------SVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 197 vIdLDPyGs~-------------~~fld~A~~~l~~gGlL~vT 226 (581)
+| +|.-|.+ ...+..++++|++||.+.+.
T Consensus 257 vv-id~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 257 CG-VDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp EE-EECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred EE-EECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 87 4665543 24688899999999988654
No 327
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=88.16 E-value=1 Score=47.07 Aligned_cols=94 Identities=12% Similarity=0.115 Sum_probs=62.0
Q ss_pred CCeEEEe-cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe---hhHHHHHhh--CCCcc
Q 047386 122 PPRVLEA-LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL---ADARVYMLT--HPKEF 195 (581)
Q Consensus 122 ~~~VLDa-fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~---~DA~~~l~~--~~~~f 195 (581)
+.+||=. -++.|..++.+|+. .|+..|++.|.++.-.+++++ .|.+ .++. .|....+.. ....+
T Consensus 214 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~~~~----lGa~-----~vi~~~~~~~~~~i~~~t~g~g~ 283 (404)
T 3ip1_A 214 GDNVVILGGGPIGLAAVAILKH-AGASKVILSEPSEVRRNLAKE----LGAD-----HVIDPTKENFVEAVLDYTNGLGA 283 (404)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCHHHHHHHHH----HTCS-----EEECTTTSCHHHHHHHHTTTCCC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHH----cCCC-----EEEcCCCCCHHHHHHHHhCCCCC
Confidence 4444432 25567777888886 589899999999999888753 4653 2222 343333322 23469
Q ss_pred cEEeeCCCCCChHhHHHHHHhc----cCCCeEEEE
Q 047386 196 DVVDLDPYGSPSVFLDSAIQSV----ADGGMLMCT 226 (581)
Q Consensus 196 DvIdLDPyGs~~~fld~A~~~l----~~gGlL~vT 226 (581)
|+| +|.-|.+...++.++++| ++||.+.+.
T Consensus 284 D~v-id~~g~~~~~~~~~~~~l~~~~~~~G~iv~~ 317 (404)
T 3ip1_A 284 KLF-LEATGVPQLVWPQIEEVIWRARGINATVAIV 317 (404)
T ss_dssp SEE-EECSSCHHHHHHHHHHHHHHCSCCCCEEEEC
T ss_pred CEE-EECCCCcHHHHHHHHHHHHhccCCCcEEEEe
Confidence 987 477777545667777777 999998775
No 328
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=88.12 E-value=0.95 Score=46.14 Aligned_cols=95 Identities=19% Similarity=0.238 Sum_probs=62.4
Q ss_pred CCCeEEE--ecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccE
Q 047386 121 KPPRVLE--ALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLD--afsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDv 197 (581)
.+.+||= +-++.|..++.+|+. .|+ +|++.|.+++..+.+++ .|.+ .+--...|....+.. ....||+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~~~g~Dv 220 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA-YGL-RVITTASRNETIEWTKK----MGAD---IVLNHKESLLNQFKTQGIELVDY 220 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH-TTC-EEEEECCSHHHHHHHHH----HTCS---EEECTTSCHHHHHHHHTCCCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHh----cCCc---EEEECCccHHHHHHHhCCCCccE
Confidence 3556664 356667777888885 688 79999999999888875 4543 221122233332322 3457997
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
| +|.-|. ...++.++++|+++|.++..
T Consensus 221 v-~d~~g~-~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 221 V-FCTFNT-DMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp E-EESSCH-HHHHHHHHHHEEEEEEEEES
T ss_pred E-EECCCc-hHHHHHHHHHhccCCEEEEE
Confidence 7 466553 35678899999999998654
No 329
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=87.57 E-value=1.9 Score=43.95 Aligned_cols=96 Identities=20% Similarity=0.191 Sum_probs=62.9
Q ss_pred CCeEEEe-cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEE-----ehhHHHHHhh--CCC
Q 047386 122 PPRVLEA-LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESH-----LADARVYMLT--HPK 193 (581)
Q Consensus 122 ~~~VLDa-fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~-----~~DA~~~l~~--~~~ 193 (581)
+.+||=. -++.|..++.+|+. .|++.|++.|.+++-.+++++. . + .-+... ..|....+.. .+.
T Consensus 180 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~l----~-~--~~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 180 GDPVLICGAGPIGLITMLCAKA-AGACPLVITDIDEGRLKFAKEI----C-P--EVVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp TCCEEEECCSHHHHHHHHHHHH-TTCCSEEEEESCHHHHHHHHHH----C-T--TCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHHh----c-h--hcccccccccchHHHHHHHHHHhCCC
Confidence 4444442 25567888888886 5888899999999999988763 2 1 112221 1333333322 245
Q ss_pred cccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 194 EFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 194 ~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
.||+| +|.-|. ...+..++++|++||.+.+..
T Consensus 252 g~Dvv-id~~g~-~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 252 EPAVA-LECTGV-ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp CCSEE-EECSCC-HHHHHHHHHHSCTTCEEEECC
T ss_pred CCCEE-EECCCC-hHHHHHHHHHhcCCCEEEEEc
Confidence 79987 466564 246788999999999988753
No 330
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=86.40 E-value=1.6 Score=45.15 Aligned_cols=93 Identities=24% Similarity=0.246 Sum_probs=59.5
Q ss_pred CCCeEEEecC-cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEALS-ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDafs-gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+||-.-+ +.|..++.+|+. .|+. |++.|.++.-.+.+++ .|.+ .+ +...+. .++......||+|+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~-~Ga~-Vi~~~~~~~~~~~a~~----lGa~---~v-i~~~~~-~~~~~~~~g~Dvvi 262 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHA-MGAH-VVAFTTSEAKREAAKA----LGAD---EV-VNSRNA-DEMAAHLKSFDFIL 262 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCE-EEEEESSGGGHHHHHH----HTCS---EE-EETTCH-HHHHTTTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCE-EEEEeCCHHHHHHHHH----cCCc---EE-eccccH-HHHHHhhcCCCEEE
Confidence 3556666433 347777888886 5875 9999999998887764 4653 22 222221 22222224789874
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
|.-|.+ ..+..++++|+++|.+.+.
T Consensus 263 -d~~g~~-~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 263 -NTVAAP-HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp -ECCSSC-CCHHHHHTTEEEEEEEEEC
T ss_pred -ECCCCH-HHHHHHHHHhccCCEEEEe
Confidence 665542 3567789999999988764
No 331
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=85.62 E-value=5.8 Score=40.62 Aligned_cols=95 Identities=11% Similarity=0.174 Sum_probs=61.4
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhh-CCCc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLT-HPKE 194 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~-~~~~ 194 (581)
.+.+||-.- ++.|...+.+|+. .|+..|++.|.++...+.+++ .|.+ .+ +.. .|....+.. ....
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~v-i~~~~~~~~~~~~~~~~~~~g 261 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGCKA-AGAARIIGVDINKDKFAKAKE----VGAT---EC-VNPQDYKKPIQEVLTEMSNGG 261 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCGGGHHHHHH----TTCS---EE-ECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHH----hCCc---eE-ecccccchhHHHHHHHHhCCC
Confidence 355666543 3446777788886 588889999999998887753 4653 21 211 223333322 2237
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCC-CeEEEE
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADG-GMLMCT 226 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~g-GlL~vT 226 (581)
||+| +|.-|. ...+..++++|+++ |.+.+.
T Consensus 262 ~D~v-id~~g~-~~~~~~~~~~l~~~~G~iv~~ 292 (374)
T 2jhf_A 262 VDFS-FEVIGR-LDTMVTALSCCQEAYGVSVIV 292 (374)
T ss_dssp BSEE-EECSCC-HHHHHHHHHHBCTTTCEEEEC
T ss_pred CcEE-EECCCC-HHHHHHHHHHhhcCCcEEEEe
Confidence 9987 466554 35678899999999 988764
No 332
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=85.53 E-value=3 Score=42.44 Aligned_cols=96 Identities=19% Similarity=0.114 Sum_probs=60.7
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe--hhHH-HHHhhC----C
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL--ADAR-VYMLTH----P 192 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~--~DA~-~~l~~~----~ 192 (581)
.+.+||-.- ++.|..++.+|+. .|++ |++.|.+++..+++++ .|.+ .+--.. .|.. .+.... .
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~-~Ga~-Vi~~~~~~~~~~~~~~----lGa~---~~~~~~~~~~~~~~i~~~~~~~~g 238 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKA-YGAF-VVCTARSPRRLEVAKN----CGAD---VTLVVDPAKEEESSIIERIRSAIG 238 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCE-EEEEESCHHHHHHHHH----TTCS---EEEECCTTTSCHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCE-EEEEcCCHHHHHHHHH----hCCC---EEEcCcccccHHHHHHHHhccccC
Confidence 455666543 3447777888886 5886 9999999998887753 4653 221111 2322 222211 2
Q ss_pred CcccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 193 KEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 193 ~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
..||+|+ |.-|. ...+..++++|+++|.+.+..
T Consensus 239 ~g~D~vi-d~~g~-~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 239 DLPNVTI-DCSGN-EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SCCSEEE-ECSCC-HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEE-ECCCC-HHHHHHHHHHHhcCCEEEEEe
Confidence 4699884 66554 246788899999999887653
No 333
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=85.49 E-value=2.1 Score=44.08 Aligned_cols=95 Identities=15% Similarity=0.203 Sum_probs=61.8
Q ss_pred CCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhh-CCCcc
Q 047386 122 PPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLT-HPKEF 195 (581)
Q Consensus 122 ~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~-~~~~f 195 (581)
+.+||=.- ++.|..++.+|+. .|+.+|++.|.++.-.++++ ..|.+ .+ +.. .|....+.. ....|
T Consensus 194 g~~VlV~GaG~vG~~a~q~a~~-~Ga~~Vi~~~~~~~~~~~a~----~lGa~---~v-i~~~~~~~~~~~~i~~~~~gg~ 264 (378)
T 3uko_A 194 GSNVAIFGLGTVGLAVAEGAKT-AGASRIIGIDIDSKKYETAK----KFGVN---EF-VNPKDHDKPIQEVIVDLTDGGV 264 (378)
T ss_dssp TCCEEEECCSHHHHHHHHHHHH-HTCSCEEEECSCTTHHHHHH----TTTCC---EE-ECGGGCSSCHHHHHHHHTTSCB
T ss_pred CCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHH----HcCCc---EE-EccccCchhHHHHHHHhcCCCC
Confidence 44555432 4467788888886 48888999999999888765 34543 21 211 233333322 23379
Q ss_pred cEEeeCCCCCChHhHHHHHHhccCC-CeEEEEe
Q 047386 196 DVVDLDPYGSPSVFLDSAIQSVADG-GMLMCTA 227 (581)
Q Consensus 196 DvIdLDPyGs~~~fld~A~~~l~~g-GlL~vTa 227 (581)
|+| +|.-|. ...++.++++|++| |.+.+..
T Consensus 265 D~v-id~~g~-~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 265 DYS-FECIGN-VSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SEE-EECSCC-HHHHHHHHHTBCTTTCEEEECS
T ss_pred CEE-EECCCC-HHHHHHHHHHhhccCCEEEEEc
Confidence 988 466665 35678899999996 9887753
No 334
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=85.43 E-value=4.7 Score=41.29 Aligned_cols=96 Identities=13% Similarity=0.103 Sum_probs=62.0
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhh-CCCc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLT-HPKE 194 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~-~~~~ 194 (581)
.+.+||-.- ++.|..++.+|+. .|+..|++.|.++...+++++ .|.+ .+ +.. .|....+.. ....
T Consensus 191 ~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~v-i~~~~~~~~~~~~i~~~t~gg 261 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGCKA-AGASRIIGVGTHKDKFPKAIE----LGAT---EC-LNPKDYDKPIYEVICEKTNGG 261 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSCGGGHHHHHH----TTCS---EE-ECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCCHHHHHHHHH----cCCc---EE-EecccccchHHHHHHHHhCCC
Confidence 355666643 3446677777876 488889999999998887753 5653 22 211 233333322 2237
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCC-CeEEEEe
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADG-GMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~g-GlL~vTa 227 (581)
||+|+ |.-|. ...+..++++|+++ |.+.+..
T Consensus 262 ~Dvvi-d~~g~-~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 262 VDYAV-ECAGR-IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp BSEEE-ECSCC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred CCEEE-ECCCC-HHHHHHHHHHHhcCCCEEEEEc
Confidence 99874 66664 35678899999999 9887653
No 335
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=85.26 E-value=2.3 Score=43.62 Aligned_cols=94 Identities=17% Similarity=0.261 Sum_probs=62.1
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcE-EEEehhHHHHHhh-CCCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV-ESHLADARVYMLT-HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v-~v~~~DA~~~l~~-~~~~fD 196 (581)
.+.+||-.- ++.|...+.+|+. .|+ +|++.|.+++..+.+++ .|.+ .+ .....|....+.. ....+|
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~-~Ga-~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~~~~~~~~g~D 233 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKK-AKC-HVIGTCSSDEKSAFLKS----LGCD---RPINYKTEPVGTVLKQEYPEGVD 233 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh-CCC-EEEEEECCHHHHHHHHH----cCCc---EEEecCChhHHHHHHHhcCCCCC
Confidence 455676654 6677888888886 588 69999999988877764 4543 21 1112233333322 234689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|+ |.-|. ..+..++++++++|.+++.
T Consensus 234 ~vi-d~~g~--~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 234 VVY-ESVGG--AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEE-ECSCT--HHHHHHHHHEEEEEEEEEC
T ss_pred EEE-ECCCH--HHHHHHHHHHhcCCEEEEE
Confidence 874 66554 6788899999999987664
No 336
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=84.88 E-value=5.2 Score=41.04 Aligned_cols=96 Identities=16% Similarity=0.174 Sum_probs=61.9
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhh-CCCc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLT-HPKE 194 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~-~~~~ 194 (581)
.+.+||-.- ++.|..++.+|+. .|+..|++.|.+++-.+.+++ .|.+ .+ +.. .|....+.. ....
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~a~~----lGa~---~v-i~~~~~~~~~~~~v~~~~~~g 265 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGCKI-AGASRIIAIDINGEKFPKAKA----LGAT---DC-LNPRELDKPVQDVITELTAGG 265 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCGGGHHHHHH----TTCS---EE-ECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHH----hCCc---EE-EccccccchHHHHHHHHhCCC
Confidence 355666542 3456777788886 588889999999988877653 4653 11 211 233333322 1237
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCC-CeEEEEe
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADG-GMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~g-GlL~vTa 227 (581)
||+| +|.-|. ...+..++++|++| |.+.+..
T Consensus 266 ~Dvv-id~~G~-~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 266 VDYS-LDCAGT-AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp BSEE-EESSCC-HHHHHHHHHTBCTTTCEEEECC
T ss_pred ccEE-EECCCC-HHHHHHHHHHhhcCCCEEEEEC
Confidence 9987 476664 35678899999999 9887654
No 337
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=84.83 E-value=5.1 Score=40.96 Aligned_cols=95 Identities=12% Similarity=0.203 Sum_probs=61.7
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhh-CCCc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLT-HPKE 194 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~-~~~~ 194 (581)
.+.+||-.- ++.|..++.+|+. .|+..|++.|.++...+++++ .|.+ .+ +.. .|....+.. ....
T Consensus 190 ~g~~VlV~GaG~vG~~avqla~~-~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~v-i~~~~~~~~~~~~v~~~~~~g 260 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGCKV-AGASRIIGVDINKDKFARAKE----FGAT---EC-INPQDFSKPIQEVLIEMTDGG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSCGGGHHHHHH----HTCS---EE-ECGGGCSSCHHHHHHHHTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEEcCCHHHHHHHHH----cCCc---eE-eccccccccHHHHHHHHhCCC
Confidence 355666542 4446777788876 488889999999998888753 4653 22 211 123333322 2237
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCC-CeEEEE
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADG-GMLMCT 226 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~g-GlL~vT 226 (581)
||+| +|.-|. ...+..++++|+++ |.+.+.
T Consensus 261 ~D~v-id~~g~-~~~~~~~~~~l~~~~G~iv~~ 291 (373)
T 2fzw_A 261 VDYS-FECIGN-VKVMRAALEACHKGWGVSVVV 291 (373)
T ss_dssp BSEE-EECSCC-HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEE-EECCCc-HHHHHHHHHhhccCCcEEEEE
Confidence 9987 466654 35678899999999 988764
No 338
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=84.47 E-value=2 Score=43.37 Aligned_cols=96 Identities=16% Similarity=0.231 Sum_probs=61.5
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fD 196 (581)
.+.+||-.- +|.|...+.+|+. .|+ +|++.|.++.-.+.+++ .|.+ .-+.....|....+.. ....||
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----~ga~--~~~~~~~~~~~~~~~~~~~~~g~D 219 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKM-KGA-HTIAVASTDEKLKIAKE----YGAE--YLINASKEDILRQVLKFTNGKGVD 219 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHH----cCCc--EEEeCCCchHHHHHHHHhCCCCce
Confidence 355666543 4566667777776 587 79999999998887754 4543 1111112333333322 135699
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|. ..+..++++|++||.+.+..
T Consensus 220 ~v-id~~g~--~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 220 AS-FDSVGK--DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EE-EECCGG--GGHHHHHHHEEEEEEEEECC
T ss_pred EE-EECCCh--HHHHHHHHHhccCCEEEEEc
Confidence 87 466554 67888999999999988754
No 339
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=84.35 E-value=5.8 Score=40.63 Aligned_cols=95 Identities=17% Similarity=0.194 Sum_probs=61.4
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhh-CCCc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLT-HPKE 194 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~-~~~~ 194 (581)
.+.+||-.- ++.|..++.+|+. .|+..|++.|.++...+.+++ .|.+ .+ +.. .|....+.. ....
T Consensus 192 ~g~~VlV~GaG~vG~~a~qla~~-~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~v-i~~~~~~~~~~~~~~~~~~~g 262 (374)
T 1cdo_A 192 PGSTCAVFGLGAVGLAAVMGCHS-AGAKRIIAVDLNPDKFEKAKV----FGAT---DF-VNPNDHSEPISQVLSKMTNGG 262 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSCGGGHHHHHH----TTCC---EE-ECGGGCSSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCHHHHHHHHH----hCCc---eE-EeccccchhHHHHHHHHhCCC
Confidence 355666543 3447777888886 588889999999998887753 4553 22 211 123333322 1237
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCC-CeEEEE
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADG-GMLMCT 226 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~g-GlL~vT 226 (581)
+|+| +|.-|. ...+..++++|+++ |.+.+.
T Consensus 263 ~D~v-id~~g~-~~~~~~~~~~l~~~~G~iv~~ 293 (374)
T 1cdo_A 263 VDFS-LECVGN-VGVMRNALESCLKGWGVSVLV 293 (374)
T ss_dssp BSEE-EECSCC-HHHHHHHHHTBCTTTCEEEEC
T ss_pred CCEE-EECCCC-HHHHHHHHHHhhcCCcEEEEE
Confidence 9987 466554 35678899999999 988764
No 340
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=84.30 E-value=3.8 Score=41.96 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=60.6
Q ss_pred CCCeEEEecC-cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe--hhHHHHHhh--CCCcc
Q 047386 121 KPPRVLEALS-ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL--ADARVYMLT--HPKEF 195 (581)
Q Consensus 121 ~~~~VLDafs-gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~--~DA~~~l~~--~~~~f 195 (581)
.+.+||-.-+ +.|..++.+|+. .|+ +|++.|.++.-.+.+++ .|.+ .+ +.. .|....+.. ....|
T Consensus 189 ~g~~VlV~G~G~vG~~a~qla~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~v-i~~~~~~~~~~v~~~~~g~g~ 258 (363)
T 3uog_A 189 AGDRVVVQGTGGVALFGLQIAKA-TGA-EVIVTSSSREKLDRAFA----LGAD---HG-INRLEEDWVERVYALTGDRGA 258 (363)
T ss_dssp TTCEEEEESSBHHHHHHHHHHHH-TTC-EEEEEESCHHHHHHHHH----HTCS---EE-EETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCC-EEEEEecCchhHHHHHH----cCCC---EE-EcCCcccHHHHHHHHhCCCCc
Confidence 3556665433 336677777876 588 79999999998887654 4653 22 221 233333322 23479
Q ss_pred cEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 196 DVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 196 DvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+| +|.-|. ..+..++++|++||.+++..
T Consensus 259 D~v-id~~g~--~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 259 DHI-LEIAGG--AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp EEE-EEETTS--SCHHHHHHHEEEEEEEEEEC
T ss_pred eEE-EECCCh--HHHHHHHHHhhcCCEEEEEe
Confidence 987 466552 56788999999999988764
No 341
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=83.91 E-value=2.3 Score=39.23 Aligned_cols=95 Identities=22% Similarity=0.207 Sum_probs=56.8
Q ss_pred CCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-C-CCcccE
Q 047386 122 PPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-H-PKEFDV 197 (581)
Q Consensus 122 ~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~-~~~fDv 197 (581)
+.+||..- +|.|...++.++. .|+ +|++.|.+++..+.+++ .+.. ..+.....|....+.. . ...+|+
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~-~G~-~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~~~~~D~ 110 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKM-IGA-RIYTTAGSDAKREMLSR----LGVE--YVGDSRSVDFADEILELTDGYGVDV 110 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHH-HTC-EEEEEESSHHHHHHHHT----TCCS--EEEETTCSTHHHHHHHHTTTCCEEE
T ss_pred CCEEEEeeCCChHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHH----cCCC--EEeeCCcHHHHHHHHHHhCCCCCeE
Confidence 45777654 3445555555654 476 69999999987766543 3442 1111112233333322 1 246999
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|+ |--| ...+..+++++++||.+.+..
T Consensus 111 vi-~~~g--~~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 111 VL-NSLA--GEAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp EE-ECCC--THHHHHHHHTEEEEEEEEECS
T ss_pred EE-ECCc--hHHHHHHHHHhccCCEEEEEc
Confidence 87 4434 267888999999999887754
No 342
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=83.78 E-value=2.1 Score=37.62 Aligned_cols=22 Identities=32% Similarity=0.474 Sum_probs=18.1
Q ss_pred chhhhH-HHHHHHHHHHHHHcCC
Q 047386 255 CHEMAL-RILLACIESHANRYKR 276 (581)
Q Consensus 255 ~hE~~l-Rill~~i~~~Aa~~~r 276 (581)
.||++| .-++..+.+.|.+.|.
T Consensus 3 MHE~si~~~i~~~~~~~A~~~g~ 25 (119)
T 2kdx_A 3 MHEYSVVSSLIALCEEHAKKNQA 25 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHHHHHHHHHcCC
Confidence 699998 6788888888888764
No 343
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=83.60 E-value=1.2 Score=46.55 Aligned_cols=59 Identities=12% Similarity=0.110 Sum_probs=49.0
Q ss_pred CCeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHH
Q 047386 122 PPRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVY 187 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~ 187 (581)
+..|||+..|.|++....+... .+++|+++|+|+..+..+++.. . . ++++++++|+..+
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~-~~~~vvavE~D~~l~~~L~~~~--~--~--~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKY-CPRQYSLLEKRSSLYKFLNAKF--E--G--SPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHH-CCSEEEEECCCHHHHHHHHHHT--T--T--SSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhC-CCCEEEEEecCHHHHHHHHHhc--c--C--CCEEEEECCccch
Confidence 4589999999999999998742 3578999999999999998876 1 1 4789999999544
No 344
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=83.57 E-value=1.2 Score=45.47 Aligned_cols=93 Identities=10% Similarity=0.113 Sum_probs=59.1
Q ss_pred CeEEE--ecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC--CCcccEE
Q 047386 123 PRVLE--ALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH--PKEFDVV 198 (581)
Q Consensus 123 ~~VLD--afsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~--~~~fDvI 198 (581)
.+||= +-++.|...+.+|+. .|+ +|++.|.+++-.+.+++ .|.+ .-+.....|....+... ...+|+|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~-~Ga-~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~v~~~~~~~g~D~v 237 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKE-EGF-RPIVTVRRDEQIALLKD----IGAA--HVLNEKAPDFEATLREVMKAEQPRIF 237 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHH-HTC-EEEEEESCGGGHHHHHH----HTCS--EEEETTSTTHHHHHHHHHHHHCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHH----cCCC--EEEECCcHHHHHHHHHHhcCCCCcEE
Confidence 45553 455566666777776 488 79999999988887763 4543 11111123333333221 2368987
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|. +.+..++++|+++|.+.+.
T Consensus 238 -id~~g~--~~~~~~~~~l~~~G~iv~~ 262 (349)
T 3pi7_A 238 -LDAVTG--PLASAIFNAMPKRARWIIY 262 (349)
T ss_dssp -EESSCH--HHHHHHHHHSCTTCEEEEC
T ss_pred -EECCCC--hhHHHHHhhhcCCCEEEEE
Confidence 577664 4567899999999998875
No 345
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=83.35 E-value=1.8 Score=44.74 Aligned_cols=95 Identities=16% Similarity=0.221 Sum_probs=61.7
Q ss_pred CCeEEEe-cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEE----ehhHHHHHhh-C-CCc
Q 047386 122 PPRVLEA-LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESH----LADARVYMLT-H-PKE 194 (581)
Q Consensus 122 ~~~VLDa-fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~----~~DA~~~l~~-~-~~~ 194 (581)
+.+||-. -++.|..++.+|+. .|+.+|++.|.+++..+.+++ .|.+ .+--. ..|....+.. . ...
T Consensus 196 g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~~~g~g 267 (380)
T 1vj0_A 196 GKTVVIQGAGPLGLFGVVIARS-LGAENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDITHGRG 267 (380)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTBSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHHTTTSC
T ss_pred CCEEEEECcCHHHHHHHHHHHH-cCCceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHHhCCCC
Confidence 4555544 35567888888886 587789999999998888753 5653 22111 1232233322 2 236
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
||+| +|.-|.+ ..+..++++|+++|.+.+.
T Consensus 268 ~Dvv-id~~g~~-~~~~~~~~~l~~~G~iv~~ 297 (380)
T 1vj0_A 268 ADFI-LEATGDS-RALLEGSELLRRGGFYSVA 297 (380)
T ss_dssp EEEE-EECSSCT-THHHHHHHHEEEEEEEEEC
T ss_pred CcEE-EECCCCH-HHHHHHHHHHhcCCEEEEE
Confidence 9987 4665543 4677889999999988764
No 346
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=83.13 E-value=1.2 Score=45.28 Aligned_cols=89 Identities=18% Similarity=0.192 Sum_probs=60.1
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+||-.- ++.|..++.+|+. .|+ +|++.|.+++-.+.+++ .|.+ . ++ .|... + ...||+|
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~--v~-~~~~~-~---~~~~D~v- 238 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVA-MGA-EVSVFARNEHKKQDALS----MGVK---H--FY-TDPKQ-C---KEELDFI- 238 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHH-TTC-EEEEECSSSTTHHHHHH----TTCS---E--EE-SSGGG-C---CSCEEEE-
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-CCC-eEEEEeCCHHHHHHHHh----cCCC---e--ec-CCHHH-H---hcCCCEE-
Confidence 456777643 3346677777876 588 79999999998887754 5653 2 22 33321 2 2278988
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|.-|.+ ..+..++++|+++|.+.+..
T Consensus 239 id~~g~~-~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPTH-YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCSC-CCHHHHHTTEEEEEEEEECC
T ss_pred EECCCcH-HHHHHHHHHHhcCCEEEEEC
Confidence 4776653 36788999999999988753
No 347
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=83.11 E-value=3.2 Score=42.01 Aligned_cols=97 Identities=21% Similarity=0.182 Sum_probs=62.6
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccE
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDv 197 (581)
.+.+||-.- ++.|..++.+|+.. |..+|++.|.+++-.+++++ .|.+ .+.....|....+.. ....+|+
T Consensus 171 ~g~~vlv~GaG~vG~~a~qla~~~-g~~~Vi~~~~~~~~~~~~~~----lGa~---~~i~~~~~~~~~v~~~t~g~g~d~ 242 (345)
T 3jv7_A 171 PGSTAVVIGVGGLGHVGIQILRAV-SAARVIAVDLDDDRLALARE----VGAD---AAVKSGAGAADAIRELTGGQGATA 242 (345)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHH-CCCEEEEEESCHHHHHHHHH----TTCS---EEEECSTTHHHHHHHHHGGGCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHHH----cCCC---EEEcCCCcHHHHHHHHhCCCCCeE
Confidence 345555432 44577788888864 56789999999998887754 5653 222222333333322 1346887
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
| +|.-|. ...++.++++|+++|.+.+..
T Consensus 243 v-~d~~G~-~~~~~~~~~~l~~~G~iv~~G 270 (345)
T 3jv7_A 243 V-FDFVGA-QSTIDTAQQVVAVDGHISVVG 270 (345)
T ss_dssp E-EESSCC-HHHHHHHHHHEEEEEEEEECS
T ss_pred E-EECCCC-HHHHHHHHHHHhcCCEEEEEC
Confidence 6 566665 247888999999999988753
No 348
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=83.07 E-value=1.9 Score=44.28 Aligned_cols=95 Identities=16% Similarity=0.114 Sum_probs=61.7
Q ss_pred CCeEEE--ecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEE
Q 047386 122 PPRVLE--ALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVV 198 (581)
Q Consensus 122 ~~~VLD--afsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvI 198 (581)
+.+||= +-++.|..++.+|+...| .+|++.|.+++-.+.+++ .|.+ .+--...|....+.. ....+|+|
T Consensus 172 g~~VlV~Ga~G~vG~~a~qlak~~~g-~~Vi~~~~~~~~~~~~~~----lGad---~vi~~~~~~~~~v~~~~~~g~Dvv 243 (363)
T 4dvj_A 172 APAILIVGGAGGVGSIAVQIARQRTD-LTVIATASRPETQEWVKS----LGAH---HVIDHSKPLAAEVAALGLGAPAFV 243 (363)
T ss_dssp EEEEEEESTTSHHHHHHHHHHHHHCC-SEEEEECSSHHHHHHHHH----TTCS---EEECTTSCHHHHHHTTCSCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhcC-CEEEEEeCCHHHHHHHHH----cCCC---EEEeCCCCHHHHHHHhcCCCceEE
Confidence 445553 356777888888885444 479999999998888754 5653 221122333333332 23578976
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|. ...+..++++|+++|.+++.
T Consensus 244 -id~~g~-~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 244 -FSTTHT-DKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp -EECSCH-HHHHHHHHHHSCTTCEEEEC
T ss_pred -EECCCc-hhhHHHHHHHhcCCCEEEEE
Confidence 566554 24678899999999998875
No 349
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=82.88 E-value=1.9 Score=43.31 Aligned_cols=96 Identities=18% Similarity=0.211 Sum_probs=61.1
Q ss_pred CCCeEEEe--cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCccc
Q 047386 121 KPPRVLEA--LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDa--fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fD 196 (581)
.+.+||-. -++.|...+.+|+. .|+ +|++.|.+++-.+.+++ .|.+ .-+.....|....+.. ....+|
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----~Ga~--~~~~~~~~~~~~~~~~~~~~~g~D 211 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKA-LGA-KLIGTVSSPEKAAHAKA----LGAW--ETIDYSHEDVAKRVLELTDGKKCP 211 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-HTC-EEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHH----cCCC--EEEeCCCccHHHHHHHHhCCCCce
Confidence 35567643 34556666677776 477 79999999998888764 4543 1111112333333322 234789
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|. +.+..++++|++||.+.+..
T Consensus 212 vv-id~~g~--~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 212 VV-YDGVGQ--DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp EE-EESSCG--GGHHHHHTTEEEEEEEEECC
T ss_pred EE-EECCCh--HHHHHHHHHhcCCCEEEEEe
Confidence 76 466564 67788999999999988764
No 350
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=82.81 E-value=2.4 Score=38.52 Aligned_cols=22 Identities=27% Similarity=0.282 Sum_probs=17.6
Q ss_pred chhhhH-HHHHHHHHHHHHHcCC
Q 047386 255 CHEMAL-RILLACIESHANRYKR 276 (581)
Q Consensus 255 ~hE~~l-Rill~~i~~~Aa~~~r 276 (581)
.||++| .-++..+.+.|.+.|.
T Consensus 1 MHE~sia~~iv~~v~~~A~~~g~ 23 (139)
T 3a43_A 1 MHEWALADAIVRTVLDYAQREGA 23 (139)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CcHHHHHHHHHHHHHHHHHHcCC
Confidence 488887 5678888888888775
No 351
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=82.78 E-value=2.6 Score=42.50 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=62.3
Q ss_pred CCCeEEEe-cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccE
Q 047386 121 KPPRVLEA-LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDa-fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDv 197 (581)
.+.+||=. -+|.|..++.+|+. .|+..|+++|.+++-.+++++ .|.+ .-+.....|....... ....+|+
T Consensus 160 ~g~~VlV~GaG~vG~~aiq~ak~-~G~~~vi~~~~~~~k~~~a~~----lGa~--~~i~~~~~~~~~~~~~~~~~~g~d~ 232 (346)
T 4a2c_A 160 ENKNVIIIGAGTIGLLAIQCAVA-LGAKSVTAIDISSEKLALAKS----FGAM--QTFNSSEMSAPQMQSVLRELRFNQL 232 (346)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHH----TTCS--EEEETTTSCHHHHHHHHGGGCSSEE
T ss_pred CCCEEEEECCCCcchHHHHHHHH-cCCcEEEEEechHHHHHHHHH----cCCe--EEEeCCCCCHHHHHHhhcccCCccc
Confidence 34555543 34567777888886 589999999999998877653 5654 1122222333333322 1244665
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
| +|.-|++ ..++.+++++++||.+.+..
T Consensus 233 v-~d~~G~~-~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 233 I-LETAGVP-QTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp E-EECSCSH-HHHHHHHHHCCTTCEEEECC
T ss_pred c-ccccccc-chhhhhhheecCCeEEEEEe
Confidence 5 5665653 56788999999999988753
No 352
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=82.46 E-value=1.6 Score=44.25 Aligned_cols=96 Identities=23% Similarity=0.222 Sum_probs=60.7
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcE-EEEehhHHHHHhhCCCcccEE
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV-ESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v-~v~~~DA~~~l~~~~~~fDvI 198 (581)
.+.+||-.- +|.|...+.+|+. .|+ +|++.|.++.-.+.+++ .|.+ .+ .....|....+......+|+|
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~~~d~~~~~~~~~~~~~~~~~d~v 234 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKA-MGL-NVVAVDIGDEKLELAKE----LGAD---LVVNPLKEDAAKFMKEKVGGVHAA 234 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHH-TTC-EEEEECSCHHHHHHHHH----TTCS---EEECTTTSCHHHHHHHHHSSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHH----CCCC---EEecCCCccHHHHHHHHhCCCCEE
Confidence 345555443 5578888899886 587 89999999998887753 4543 11 111123222222111368987
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|.-|. ...+..++++++++|.+.+..
T Consensus 235 -id~~g~-~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 235 -VVTAVS-KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp -EESSCC-HHHHHHHHHHEEEEEEEEECC
T ss_pred -EECCCC-HHHHHHHHHHhhcCCEEEEec
Confidence 455554 356788899999999887653
No 353
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=82.32 E-value=2.4 Score=43.35 Aligned_cols=96 Identities=27% Similarity=0.378 Sum_probs=60.7
Q ss_pred CCCeEEEe--cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccE
Q 047386 121 KPPRVLEA--LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDa--fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDv 197 (581)
.+.+||-. -+|.|...+.+|+. .|+ +|++.|.++...+.+++ .|.+ .-+.....|....+.. ....+|+
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~--~~~~~~~~~~~~~~~~~~~~g~Dv 238 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARA-FGA-EVYATAGSTGKCEACER----LGAK--RGINYRSEDFAAVIKAETGQGVDI 238 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHHSSCEEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHh----cCCC--EEEeCCchHHHHHHHHHhCCCceE
Confidence 45567643 34556666777776 588 69999999999888765 4543 1111112233222221 1457897
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
| +|.-|. +.+..++++|+++|.+.+..
T Consensus 239 v-id~~g~--~~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 239 I-LDMIGA--AYFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp E-EESCCG--GGHHHHHHTEEEEEEEEECC
T ss_pred E-EECCCH--HHHHHHHHHhccCCEEEEEE
Confidence 6 466564 57888999999999887753
No 354
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=82.32 E-value=3.2 Score=42.02 Aligned_cols=94 Identities=11% Similarity=0.099 Sum_probs=60.8
Q ss_pred CCCeEEEec-CcccHHHHHHhhhc-CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhhCCCc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREV-EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLTHPKE 194 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~-~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~~~~~ 194 (581)
.+.+||-.- ++.|..++.+|+.. +|+ +|++.|.+++-.+.+++ .|.+ .++. .|...-+. ....
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~----lGa~-----~vi~~~~~~~~~~~~~-~g~g 238 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE----LGAD-----YVSEMKDAESLINKLT-DGLG 238 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH----HTCS-----EEECHHHHHHHHHHHH-TTCC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH----hCCC-----EEeccccchHHHHHhh-cCCC
Confidence 456666543 44577888888863 177 59999999998888764 4643 2232 12211222 1346
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
||+| +|.-|. ...+..++++|+++|.+.+..
T Consensus 239 ~D~v-id~~g~-~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 239 ASIA-IDLVGT-EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp EEEE-EESSCC-HHHHHHHHHHEEEEEEEEECC
T ss_pred ccEE-EECCCC-hHHHHHHHHHhhcCCEEEEeC
Confidence 9987 466564 236788899999999887653
No 355
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=81.97 E-value=12 Score=30.99 Aligned_cols=76 Identities=12% Similarity=-0.009 Sum_probs=46.9
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCC---CCChHhHHHHHHhccCCCe
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPY---GSPSVFLDSAIQSVADGGM 222 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPy---Gs~~~fld~A~~~l~~gGl 222 (581)
.+|..+|-++...+.++.-++..|.. +. ...|....+.. ....||+|++|-. .....++...-+.-..--+
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 82 (130)
T 3eod_A 8 KQILIVEDEQVFRSLLDSWFSSLGAT----TV-LAADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPV 82 (130)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCE
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCce----EE-EeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCE
Confidence 57999999999999999999988763 32 23444443322 2356999999952 2233455432222223346
Q ss_pred EEEEe
Q 047386 223 LMCTA 227 (581)
Q Consensus 223 L~vTa 227 (581)
+.+|+
T Consensus 83 i~~t~ 87 (130)
T 3eod_A 83 LVISA 87 (130)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 66665
No 356
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=81.96 E-value=1.5 Score=44.53 Aligned_cols=96 Identities=14% Similarity=0.136 Sum_probs=61.4
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCccc
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fD 196 (581)
.+.+||-.-+ |.|...+.+|+. .|+ +|++.|.+++..+.+++ .|.+ .-+.....|....+.. ....||
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----lga~--~~~~~~~~~~~~~~~~~~~~~g~D 215 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQI-LNF-RLIAVTRNNKHTEELLR----LGAA--YVIDTSTAPLYETVMELTNGIGAD 215 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-HTC-EEEEEESSSTTHHHHHH----HTCS--EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHh----CCCc--EEEeCCcccHHHHHHHHhCCCCCc
Confidence 4567876544 467888888886 487 79999999998888765 4543 1111112233333322 234799
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|. +....++++|++||.+++..
T Consensus 216 vv-id~~g~--~~~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 216 AA-IDSIGG--PDGNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp EE-EESSCH--HHHHHHHHTEEEEEEEEECC
T ss_pred EE-EECCCC--hhHHHHHHHhcCCCEEEEEe
Confidence 87 465554 44455678999999988754
No 357
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=81.87 E-value=3.6 Score=41.44 Aligned_cols=96 Identities=21% Similarity=0.222 Sum_probs=60.2
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fD 196 (581)
.+.+||-.- +|.|...+++++. .|+ +|++.|.+++..+.+++ .+.+ ..+.....|....+.. ....+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~-~G~-~Vi~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~i~~~~~~~~~d 216 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARH-LGA-TVIGTVSTEEKAETARK----LGCH--HTINYSTQDFAEVVREITGGKGVD 216 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHHTTCCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHH----cCCC--EEEECCCHHHHHHHHHHhCCCCCe
Confidence 355677543 4566667777776 577 79999999988887754 3542 1111112232222221 134689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|+ |.-|. ..+..+++++++||.+.+..
T Consensus 217 ~vi-~~~g~--~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 217 VVY-DSIGK--DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEE-ECSCT--TTHHHHHHTEEEEEEEEECC
T ss_pred EEE-ECCcH--HHHHHHHHhhccCCEEEEEe
Confidence 875 55554 67888999999999887653
No 358
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=81.56 E-value=1.6 Score=44.42 Aligned_cols=97 Identities=20% Similarity=0.219 Sum_probs=61.8
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcE-EEEehhHHHHHhh--CCCccc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV-ESHLADARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v-~v~~~DA~~~l~~--~~~~fD 196 (581)
.+.+||-.- ++.|...+.+|+. .|+.+|++.|.+++..+.+++ .|.+ .+ .....|....+.. ....+|
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~-~Ga~~Vi~~~~~~~~~~~~~~----~Ga~---~~~~~~~~~~~~~v~~~~~g~g~D 238 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKA-SGAYPVIVSEPSDFRRELAKK----VGAD---YVINPFEEDVVKEVMDITDGNGVD 238 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-TTCCSEEEECSCHHHHHHHHH----HTCS---EEECTTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHH----hCCC---EEECCCCcCHHHHHHHHcCCCCCC
Confidence 455555433 5567888888886 588679999999988887753 3543 11 1111233333322 134689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|. ...+..++++++++|.+.+..
T Consensus 239 ~v-id~~g~-~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 239 VF-LEFSGA-PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EE-EECSCC-HHHHHHHHHHEEEEEEEEECC
T ss_pred EE-EECCCC-HHHHHHHHHHHhcCCEEEEEc
Confidence 87 465553 356788899999999887653
No 359
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=81.05 E-value=1 Score=46.02 Aligned_cols=94 Identities=13% Similarity=0.133 Sum_probs=59.8
Q ss_pred CeEEEec-CcccHHH-HHHh-hhcCCccEEEEEeCCHH---HHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCccc
Q 047386 123 PRVLEAL-SASGLRA-LRYA-REVEGIGQVVALDNDKA---SVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFD 196 (581)
Q Consensus 123 ~~VLDaf-sgSG~rg-Ir~a-~E~~Ga~~V~anD~s~~---Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fD 196 (581)
.+||-.- ++.|..+ +.+| +. .|+++|++.|.+++ -.++++ ..|.+ .+.....|...+....+ .||
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~-~Ga~~Vi~~~~~~~~~~~~~~~~----~lGa~---~v~~~~~~~~~i~~~~g-g~D 244 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD-KGYENLYCLGRRDRPDPTIDIIE----ELDAT---YVDSRQTPVEDVPDVYE-QMD 244 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT-TCCCEEEEEECCCSSCHHHHHHH----HTTCE---EEETTTSCGGGHHHHSC-CEE
T ss_pred CEEEEECCCHHHHHHHHHHHHHH-cCCcEEEEEeCCcccHHHHHHHH----HcCCc---ccCCCccCHHHHHHhCC-CCC
Confidence 4444322 6678888 8888 75 58888999999987 667664 34542 22111123222221123 789
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|.+ ..+..++++|+++|.+.+..
T Consensus 245 vv-id~~g~~-~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 245 FI-YEATGFP-KHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp EE-EECSCCH-HHHHHHHHHEEEEEEEEECC
T ss_pred EE-EECCCCh-HHHHHHHHHHhcCCEEEEEe
Confidence 87 5776652 46788999999999887753
No 360
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=81.05 E-value=3.2 Score=42.05 Aligned_cols=96 Identities=20% Similarity=0.256 Sum_probs=61.5
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-C-CCccc
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-H-PKEFD 196 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~-~~~fD 196 (581)
.+.+||-.-+ |.|...+.+++. .|+ +|++.|.++...+.+++ .|.+ .-+.....|....+.. . ...+|
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~-~G~-~Vi~~~~~~~~~~~~~~----~ga~--~~~d~~~~~~~~~~~~~~~~~~~d 237 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKL-FGA-RVIATAGSEDKLRRAKA----LGAD--ETVNYTHPDWPKEVRRLTGGKGAD 237 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----HTCS--EEEETTSTTHHHHHHHHTTTTCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHh----cCCC--EEEcCCcccHHHHHHHHhCCCCce
Confidence 4567776654 667778888876 577 79999999998888753 3543 1111112233232322 1 24689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|+ |.-| ...+..++++++++|.+.+..
T Consensus 238 ~vi-~~~g--~~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 238 KVV-DHTG--ALYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp EEE-ESSC--SSSHHHHHHHEEEEEEEEESS
T ss_pred EEE-ECCC--HHHHHHHHHhhccCCEEEEEe
Confidence 874 5555 256788899999999877643
No 361
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=80.92 E-value=0.84 Score=45.80 Aligned_cols=84 Identities=14% Similarity=0.200 Sum_probs=57.0
Q ss_pred CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCCCCChH
Q 047386 130 SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPYGSPSV 208 (581)
Q Consensus 130 sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPyGs~~~ 208 (581)
++.|..++.+|+. .|+ +|++.|.+++-.+.+++ .|.+ .+ +...|... +.. ....+|+| +|.-|. +
T Consensus 157 G~vG~~aiqla~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~v-i~~~~~~~-~~~~~~~~~d~v-~d~~g~--~ 222 (324)
T 3nx4_A 157 GGVGSTAVALLHK-LGY-QVAAVSGRESTHGYLKS----LGAN---RI-LSRDEFAE-SRPLEKQLWAGA-IDTVGD--K 222 (324)
T ss_dssp SHHHHHHHHHHHH-TTC-CEEEEESCGGGHHHHHH----HTCS---EE-EEGGGSSC-CCSSCCCCEEEE-EESSCH--H
T ss_pred cHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHh----cCCC---EE-EecCCHHH-HHhhcCCCccEE-EECCCc--H
Confidence 5667777788886 588 79999999998888865 4653 22 22222111 211 13468875 677664 5
Q ss_pred hHHHHHHhccCCCeEEEEe
Q 047386 209 FLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 209 fld~A~~~l~~gGlL~vTa 227 (581)
.+..++++|+++|.+.+..
T Consensus 223 ~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 223 VLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp HHHHHHHTEEEEEEEEECC
T ss_pred HHHHHHHHHhcCCEEEEEe
Confidence 8889999999999987753
No 362
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=80.33 E-value=2.4 Score=42.67 Aligned_cols=97 Identities=21% Similarity=0.198 Sum_probs=60.5
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccE
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDv 197 (581)
.+.+||-.-+ |.|...+.+++. .|+ +|++.|.+++..+.+.+ ..|.+ .-+.....|....+.. ....+|+
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~---~~g~~--~~~~~~~~~~~~~~~~~~~~~~d~ 221 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARL-KGC-RVVGIAGGAEKCRFLVE---ELGFD--GAIDYKNEDLAAGLKRECPKGIDV 221 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH---TTCCS--EEEETTTSCHHHHHHHHCTTCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHH---HcCCC--EEEECCCHHHHHHHHHhcCCCceE
Confidence 4567775433 456666677775 588 89999999988777632 23442 1111112333333322 2346998
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
| +|.-|. +.+..++++++++|.+.+..
T Consensus 222 v-i~~~g~--~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 222 F-FDNVGG--EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp E-EESSCH--HHHHHHHTTEEEEEEEEECC
T ss_pred E-EECCCc--chHHHHHHHHhhCCEEEEEe
Confidence 7 455553 67888999999999987753
No 363
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=79.60 E-value=4.9 Score=39.81 Aligned_cols=91 Identities=20% Similarity=0.228 Sum_probs=58.1
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
.+.+||-.-+ |.|...+.+|+. .|+ +|++.|.++...+.+++ .|.+ .+ +...+...+.... ..+|+|
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~~-~~~~~~~~~~~~~-~~~d~v 193 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARA-MGL-RVLAAASRPEKLALPLA----LGAE---EA-ATYAEVPERAKAW-GGLDLV 193 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH-TTC-EEEEEESSGGGSHHHHH----TTCS---EE-EEGGGHHHHHHHT-TSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHh----cCCC---EE-EECCcchhHHHHh-cCceEE
Confidence 3556776543 456666777776 587 79999999988777643 4543 22 2222101222211 469988
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+ | -|. +.+..++++++++|.+.+.
T Consensus 194 i-d-~g~--~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 194 L-E-VRG--KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp E-E-CSC--TTHHHHHTTEEEEEEEEEC
T ss_pred E-E-CCH--HHHHHHHHhhccCCEEEEE
Confidence 6 4 665 5788899999999987764
No 364
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=79.12 E-value=2.9 Score=42.43 Aligned_cols=95 Identities=24% Similarity=0.276 Sum_probs=60.2
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-C-CCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-H-PKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~-~~~fD 196 (581)
.+.+||-.- +|.|...+.+|+. .|+ +|++.|.+++..+.+++ .|.+ .+.-...|....+.. . ...+|
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----~ga~---~v~~~~~~~~~~v~~~~~~~g~D 229 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKG-MGA-KVIAVVNRTAATEFVKS----VGAD---IVLPLEEGWAKAVREATGGAGVD 229 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTC-EEEEEESSGGGHHHHHH----HTCS---EEEESSTTHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHh----cCCc---EEecCchhHHHHHHHHhCCCCce
Confidence 355676443 3556666777776 587 79999999988887765 3543 222222343333322 2 34699
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|. +.+..+++++++||.+++..
T Consensus 230 vv-id~~g~--~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 230 MV-VDPIGG--PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EE-EESCC----CHHHHHHTEEEEEEEEEC-
T ss_pred EE-EECCch--hHHHHHHHhhcCCCEEEEEE
Confidence 87 466565 46888999999999988753
No 365
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=78.90 E-value=3.9 Score=40.96 Aligned_cols=96 Identities=15% Similarity=0.208 Sum_probs=58.5
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-C-CCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-H-PKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~-~~~fD 196 (581)
.+.+||-.- +|.|...+++++. .|+ +|++.|.+++..+.+++ .+.+ ..+.....|....+.. . ...+|
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~-~G~-~V~~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~D 211 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKA-LGA-KLIGTVGTAQKAQSALK----AGAW--QVINYREEDLVERLKEITGGKKVR 211 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH-HTC-EEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHTTTCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHH----cCCC--EEEECCCccHHHHHHHHhCCCCce
Confidence 355676543 4555556666665 477 79999999988887765 3542 1111112233222222 1 24689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|+ |--| ...+..+++++++||.+.+..
T Consensus 212 ~vi-~~~g--~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 212 VVY-DSVG--RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEE-ECSC--GGGHHHHHHTEEEEEEEEECC
T ss_pred EEE-ECCc--hHHHHHHHHHhcCCCEEEEEe
Confidence 874 5545 467888999999999887643
No 366
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=77.98 E-value=0.82 Score=42.32 Aligned_cols=34 Identities=18% Similarity=0.400 Sum_probs=22.4
Q ss_pred HHHHHHHcCCceEEEeecccCceEEEEEEEEcChhhhccccccceEEEEcCCCCc
Q 047386 267 IESHANRYKRYIEPVLSVQMDFYVRVFVRIYTSASAMKSTPLKLSYVYQCIGCDS 321 (581)
Q Consensus 267 i~~~Aa~~~r~i~Plls~s~dhY~RvfVrV~~~~~~~k~~~~k~g~v~~C~~C~~ 321 (581)
+.+.|..+|..+..++. ..-+..-|.|.|.+||.
T Consensus 107 l~~vA~~~Gv~v~~~~~---------------------~i~~~~~~~y~C~~Cg~ 140 (165)
T 2lcq_A 107 VQNIASLLGLRFRTLKR---------------------GIKKVIKWRYVCIGCGR 140 (165)
T ss_dssp HHHHHHHTTCCEECCSC---------------------CCSSCCCCCEEESSSCC
T ss_pred HHHHHHHCCCeEEchhh---------------------hccccccEEEECCCCCC
Confidence 56778888887665431 01123578899999985
No 367
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=77.80 E-value=13 Score=31.77 Aligned_cols=78 Identities=17% Similarity=0.223 Sum_probs=47.8
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh---hHHHHHhh-------CCCcccEEeeCCC--CC-ChHhHHHH
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA---DARVYMLT-------HPKEFDVVDLDPY--GS-PSVFLDSA 213 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~---DA~~~l~~-------~~~~fDvIdLDPy--Gs-~~~fld~A 213 (581)
-+|..+|-++...+.+++-++..+.. ..+. ... +|...+.. ....||+|++|-. +. ...++..
T Consensus 5 ~~ILivddd~~~~~~l~~~L~~~g~~--~~v~-~~~~~~~al~~l~~~~~~~~~~~~~~dliilD~~l~~~~g~~~~~~- 80 (152)
T 3heb_A 5 VTIVMIEDDLGHARLIEKNIRRAGVN--NEII-AFTDGTSALNYLFGDDKSGRVSAGRAQLVLLDLNLPDMTGIDILKL- 80 (152)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCC--CCEE-EESSHHHHHHHHHCTTSSSGGGTTCBEEEEECSBCSSSBHHHHHHH-
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCCc--ceEE-EeCCHHHHHHHHhccccccccccCCCCEEEEeCCCCCCcHHHHHHH-
Confidence 36999999999999999999998863 1233 233 34444431 1357999999962 22 2344443
Q ss_pred HHh---ccCCCeEEEEec
Q 047386 214 IQS---VADGGMLMCTAT 228 (581)
Q Consensus 214 ~~~---l~~gGlL~vTaT 228 (581)
++. ...--++.+|+.
T Consensus 81 lr~~~~~~~~pii~~t~~ 98 (152)
T 3heb_A 81 VKENPHTRRSPVVILTTT 98 (152)
T ss_dssp HHHSTTTTTSCEEEEESC
T ss_pred HHhcccccCCCEEEEecC
Confidence 332 122246777653
No 368
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=77.51 E-value=7.4 Score=32.95 Aligned_cols=76 Identities=13% Similarity=0.169 Sum_probs=47.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh---hHHHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA---DARVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVADG 220 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~---DA~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~g 220 (581)
.+|..+|-++...+.++.-++..+.. +. ... +|...+......||+|++|-. + ....++...-+.-..-
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~----v~-~~~~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ 78 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNE----VL-TASSSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHM 78 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTC
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCce----EE-EeCCHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCC
Confidence 46999999999999999999987753 22 233 344445433457999999963 2 2234554433322223
Q ss_pred CeEEEEe
Q 047386 221 GMLMCTA 227 (581)
Q Consensus 221 GlL~vTa 227 (581)
-++.+|+
T Consensus 79 ~ii~ls~ 85 (143)
T 3jte_A 79 AVIILTG 85 (143)
T ss_dssp EEEEEEC
T ss_pred eEEEEEC
Confidence 4566664
No 369
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=77.38 E-value=12 Score=31.85 Aligned_cols=77 Identities=12% Similarity=0.122 Sum_probs=43.1
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCC--CC-ChHhHHHHHHhccCC-Ce
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPY--GS-PSVFLDSAIQSVADG-GM 222 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPy--Gs-~~~fld~A~~~l~~g-Gl 222 (581)
+|..+|-++...+.++..+...+.. -.+.....++...+.. ....+|+|++|-. +. ...++.. ++...++ -+
T Consensus 4 ~ILivdd~~~~~~~l~~~L~~~~~~--~~~~~~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~l~~~-l~~~~~~~~i 80 (141)
T 3cu5_A 4 RILIVDDEKLTRDGLIANINWKALS--FDQIDQADDGINAIQIALKHPPNVLLTDVRMPRMDGIELVDN-ILKLYPDCSV 80 (141)
T ss_dssp EEEEECSCHHHHHHHHHHCCGGGSC--CSEEEEESSHHHHHHHHTTSCCSEEEEESCCSSSCHHHHHHH-HHHHCTTCEE
T ss_pred eEEEEeCCHHHHHHHHHHHHHccCC--cEEeeecccHHHHHHHHhcCCCCEEEEeCCCCCCCHHHHHHH-HHhhCCCCcE
Confidence 6899999999999888887643221 1222244444444332 2346999999962 22 2244443 3322233 35
Q ss_pred EEEEe
Q 047386 223 LMCTA 227 (581)
Q Consensus 223 L~vTa 227 (581)
+.+|+
T Consensus 81 i~ls~ 85 (141)
T 3cu5_A 81 IFMSG 85 (141)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 55655
No 370
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=77.30 E-value=6.3 Score=41.47 Aligned_cols=96 Identities=19% Similarity=0.195 Sum_probs=58.1
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---------------
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD--------------- 183 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D--------------- 183 (581)
.+.+||=.- +|.|...+.+|+. .|+ +|++.+.+++..+.+++ .|.+ .-+.....|
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~-~Ga-~vi~~~~~~~~~~~~~~----lGa~--~~i~~~~~~~~~~~~~~~~~~~~~ 291 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKN-GGG-IPVAVVSSAQKEAAVRA----LGCD--LVINRAELGITDDIADDPRRVVET 291 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----TTCC--CEEEHHHHTCCTTGGGCHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHh----cCCC--EEEecccccccccccccccccchh
Confidence 456676332 3445556666775 577 68888999998887743 4553 111111111
Q ss_pred ----HHHHHhhCCCcccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 184 ----ARVYMLTHPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 184 ----A~~~l~~~~~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+..+.......+|+| +|.-|. +.+..+++++++||.+.+..
T Consensus 292 ~~~~~~~v~~~~g~g~Dvv-id~~G~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 292 GRKLAKLVVEKAGREPDIV-FEHTGR--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHSSCCSEE-EECSCH--HHHHHHHHHSCTTCEEEESC
T ss_pred hhHHHHHHHHHhCCCceEE-EECCCc--hHHHHHHHHHhcCCEEEEEe
Confidence 112222124569987 466554 57888999999999988754
No 371
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=77.02 E-value=2.1 Score=43.04 Aligned_cols=90 Identities=20% Similarity=0.235 Sum_probs=55.8
Q ss_pred eEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH-HHHHhh-CCCcccEEe
Q 047386 124 RVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA-RVYMLT-HPKEFDVVD 199 (581)
Q Consensus 124 ~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA-~~~l~~-~~~~fDvId 199 (581)
+||-.- +|.|...+.+|+. .|+ +|++.|.+++-.+.+++ .|.+ .+ +...|. ...+.. ....+|+|
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~-~Ga-~vi~~~~~~~~~~~~~~----lGa~---~~-i~~~~~~~~~~~~~~~~~~d~v- 220 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAK-RGY-TVEASTGKAAEHDYLRV----LGAK---EV-LAREDVMAERIRPLDKQRWAAA- 220 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHH-TTC-CEEEEESCTTCHHHHHH----TTCS---EE-EECC---------CCSCCEEEE-
T ss_pred eEEEecCCCHHHHHHHHHHHH-CCC-EEEEEECCHHHHHHHHH----cCCc---EE-EecCCcHHHHHHHhcCCcccEE-
Confidence 455443 4667777788886 587 49999999887777753 4543 22 211121 111211 23468976
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|. +.+..+++++++||.+++.
T Consensus 221 id~~g~--~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 221 VDPVGG--RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp EECSTT--TTHHHHHHTEEEEEEEEEC
T ss_pred EECCcH--HHHHHHHHhhccCCEEEEE
Confidence 577665 4678899999999998764
No 372
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=76.97 E-value=0.79 Score=45.96 Aligned_cols=84 Identities=14% Similarity=0.172 Sum_probs=54.2
Q ss_pred CCeEE--EecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 122 PPRVL--EALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 122 ~~~VL--DafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
+.+|| -+ ++.|..++.+|+. .|+ +|++.| ++.-.+.+++ .|.+ .+++ | ..-+ ...||+|
T Consensus 143 g~~VlV~Ga-G~vG~~a~qlak~-~Ga-~Vi~~~-~~~~~~~~~~----lGa~-----~v~~-d-~~~v---~~g~Dvv- 203 (315)
T 3goh_A 143 QREVLIVGF-GAVNNLLTQMLNN-AGY-VVDLVS-ASLSQALAAK----RGVR-----HLYR-E-PSQV---TQKYFAI- 203 (315)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHH-HTC-EEEEEC-SSCCHHHHHH----HTEE-----EEES-S-GGGC---CSCEEEE-
T ss_pred CCEEEEECC-CHHHHHHHHHHHH-cCC-EEEEEE-ChhhHHHHHH----cCCC-----EEEc-C-HHHh---CCCccEE-
Confidence 44444 44 6678889999987 488 899999 8888887754 4643 2333 4 1112 5679987
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|.+ .+..++++|+++|.+.+.
T Consensus 204 ~d~~g~~--~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNSQ--NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC---------TTGGGEEEEEEEEEE
T ss_pred EECCCch--hHHHHHHHhcCCCEEEEE
Confidence 5776653 336788999999988775
No 373
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=76.76 E-value=2.6 Score=43.61 Aligned_cols=88 Identities=18% Similarity=0.119 Sum_probs=58.3
Q ss_pred CCCeEEEecC------cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCc
Q 047386 121 KPPRVLEALS------ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKE 194 (581)
Q Consensus 121 ~~~~VLDafs------gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~ 194 (581)
.+.+|||+-| +-|..-+|-.. +.-..|++||+++-.. . .. .++++|++.+.. ..+
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~VLr~~~--p~g~~VVavDL~~~~s-----------d---a~-~~IqGD~~~~~~--~~k 169 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTAVLRQWL--PTGTLLVDSDLNDFVS-----------D---AD-STLIGDCATVHT--ANK 169 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHHHHHHHS--CTTCEEEEEESSCCBC-----------S---SS-EEEESCGGGEEE--SSC
T ss_pred CCCEEEeCCCCCCCCCCCcHHHHHHhC--CCCcEEEEeeCccccc-----------C---CC-eEEEcccccccc--CCC
Confidence 3679999997 77886555332 2213899999997541 1 12 359999766443 468
Q ss_pred ccEEeeC--CC--CC-------ChHh----HHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLD--PY--GS-------PSVF----LDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLD--Py--Gs-------~~~f----ld~A~~~l~~gGlL~vTa 227 (581)
||+|+-| |- |. ...+ ++-|.+.|++||-+.+-.
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKV 217 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 217 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEE
Confidence 9999888 43 22 0123 345667899999999874
No 374
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=76.73 E-value=4.4 Score=40.69 Aligned_cols=95 Identities=18% Similarity=0.218 Sum_probs=58.8
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe-hhHHHHHhh-CCCccc
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL-ADARVYMLT-HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~-~DA~~~l~~-~~~~fD 196 (581)
.+.+||-.-+ |.|...+++++. .|+ +|++.|.+++..+.+++ .+.. ..+.... .|....+.. ....+|
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~-~G~-~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~~~~~d 216 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKL-KGC-KVVGAAGSDEKIAYLKQ----IGFD--AAFNYKTVNSLEEALKKASPDGYD 216 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----TTCS--EEEETTSCSCHHHHHHHHCTTCEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHh----cCCc--EEEecCCHHHHHHHHHHHhCCCCe
Confidence 4567776543 556666666665 577 79999999988776632 3442 1111111 333333332 224689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|+ |--|. +.+..++++|++||.+.+.
T Consensus 217 ~vi-~~~g~--~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 217 CYF-DNVGG--EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp EEE-ESSCH--HHHHHHHTTEEEEEEEEEC
T ss_pred EEE-ECCCh--HHHHHHHHHHhcCCEEEEE
Confidence 874 55554 5688899999999988764
No 375
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=76.49 E-value=26 Score=29.46 Aligned_cols=75 Identities=15% Similarity=0.085 Sum_probs=47.8
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH---HHHhhCCCcccEEeeCCC---CC-ChHhHHHHHHhccC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR---VYMLTHPKEFDVVDLDPY---GS-PSVFLDSAIQSVAD 219 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~---~~l~~~~~~fDvIdLDPy---Gs-~~~fld~A~~~l~~ 219 (581)
.+|..+|-++...+.++.-++..|.. +. ...|.. ..+.. ...||+|++|-. |. ...++.. ++....
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~-~~~~dlvi~D~~l~~~~~g~~~~~~-l~~~~~ 78 (140)
T 3h5i_A 6 KKILIVEDSKFQAKTIANILNKYGYT----VE-IALTGEAAVEKVSG-GWYPDLILMDIELGEGMDGVQTALA-IQQISE 78 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHT-TCCCSEEEEESSCSSSCCHHHHHHH-HHHHCC
T ss_pred cEEEEEeCCHHHHHHHHHHHHHcCCE----EE-EecChHHHHHHHhc-CCCCCEEEEeccCCCCCCHHHHHHH-HHhCCC
Confidence 47999999999999999999988763 32 333333 34432 257999999952 22 2344443 333334
Q ss_pred CCeEEEEec
Q 047386 220 GGMLMCTAT 228 (581)
Q Consensus 220 gGlL~vTaT 228 (581)
--++.+|+.
T Consensus 79 ~~ii~ls~~ 87 (140)
T 3h5i_A 79 LPVVFLTAH 87 (140)
T ss_dssp CCEEEEESS
T ss_pred CCEEEEECC
Confidence 456777753
No 376
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=76.31 E-value=19 Score=30.16 Aligned_cols=49 Identities=20% Similarity=0.118 Sum_probs=36.3
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh---hHHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA---DARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~---DA~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|+. +. ... +|...+.. ..+|+|++|-
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlii~d~ 59 (142)
T 3cg4_A 8 GDVMIVDDDAHVRIAVKTILSDAGFH----II-SADSGGQCIDLLKK--GFSGVVLLDI 59 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHT--CCCEEEEEES
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCeE----EE-EeCCHHHHHHHHHh--cCCCEEEEeC
Confidence 57999999999999999999988763 32 233 34444443 4699999995
No 377
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=76.06 E-value=14 Score=30.99 Aligned_cols=49 Identities=8% Similarity=0.116 Sum_probs=36.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|+. +. ...| |...+.. ..||+|++|-
T Consensus 7 ~~iLivdd~~~~~~~l~~~l~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlvi~d~ 58 (140)
T 3grc_A 7 PRILICEDDPDIARLLNLMLEKGGFD----SD-MVHSAAQALEQVAR--RPYAAMTVDL 58 (140)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCE----EE-EECSHHHHHHHHHH--SCCSEEEECS
T ss_pred CCEEEEcCCHHHHHHHHHHHHHCCCe----EE-EECCHHHHHHHHHh--CCCCEEEEeC
Confidence 57999999999999999999988763 32 2333 4444443 4699999996
No 378
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=74.39 E-value=3.8 Score=41.32 Aligned_cols=95 Identities=18% Similarity=0.203 Sum_probs=59.7
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe---hhHHHHHhh-CCCc
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL---ADARVYMLT-HPKE 194 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~---~DA~~~l~~-~~~~ 194 (581)
.+.+||-.-+ |.|...+++++. .|+ +|++.|.++...+.+++. .|.+ . .+.. .|....+.. ....
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~-~G~-~V~~~~~~~~~~~~~~~~---~g~~---~-~~d~~~~~~~~~~~~~~~~~~ 225 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKM-MGC-YVVGSAGSKEKVDLLKTK---FGFD---D-AFNYKEESDLTAALKRCFPNG 225 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHHT---SCCS---E-EEETTSCSCSHHHHHHHCTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHHH---cCCc---e-EEecCCHHHHHHHHHHHhCCC
Confidence 4567776543 566666777775 577 799999999887776532 2432 1 1211 133333322 2346
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|+|+ |--|. +.+..++++|++||.+.+..
T Consensus 226 ~d~vi-~~~g~--~~~~~~~~~l~~~G~~v~~G 255 (345)
T 2j3h_A 226 IDIYF-ENVGG--KMLDAVLVNMNMHGRIAVCG 255 (345)
T ss_dssp EEEEE-ESSCH--HHHHHHHTTEEEEEEEEECC
T ss_pred CcEEE-ECCCH--HHHHHHHHHHhcCCEEEEEc
Confidence 89874 55454 57888999999999887753
No 379
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=73.92 E-value=6.1 Score=34.42 Aligned_cols=74 Identities=16% Similarity=0.055 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhhCCCCCceeeHHHHhhhcCCCCCCHHHHHHHHHHCCceEEecccCCCccccCCCHHH--HHHHHHHHH
Q 047386 395 RISAVLTTISEELPDVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGV--IWDIMRCWV 471 (581)
Q Consensus 395 ri~~lL~~~~eEl~~~P~yy~l~~l~~~lk~~~P~~~~~~~aL~~~GY~aSrTH~~p~~iKTdAP~~~--i~di~r~w~ 471 (581)
....+|..+...-+.. ..+..+||..++++.+...+++..|.++||=.| ..-..+|+.-.-|.+. ++||++...
T Consensus 10 ~al~iL~~la~~~~~~--~~s~~ela~~~~i~~~~v~~il~~L~~~Glv~~-~~g~~ggy~L~~~~~~itl~di~~~~e 85 (129)
T 2y75_A 10 YGLTIMIELAKKHGEG--PTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKS-IRGAYGGYVLGSEPDAITAGDIIRVLE 85 (129)
T ss_dssp HHHHHHHHHHHTTTSC--CBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEE-C----CCEEESSCGGGCBHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCC--cCCHHHHHHHHCcCHHHHHHHHHHHHHCCceEe-cCCCCCceEeCCCHHHCcHHHHHHHHc
Confidence 3445555554422122 368999999999999999999999999999444 3222367777777666 888888763
No 380
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=73.70 E-value=6.1 Score=40.24 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=58.5
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-C-CCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-H-PKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~-~~~fD 196 (581)
.+.+||-.- +|.|...+++++. .|+ +|++.|.+++..+.+++ .|.+ ..+.....|....+.. . ...+|
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~~~~~~d 233 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRM-AGA-IPLVTAGSQKKLQMAEK----LGAA--AGFNYKKEDFSEATLKFTKGAGVN 233 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTC-EEEEEESCHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHTTTSCEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHH-cCC-EEEEEeCCHHHHHHHHH----cCCc--EEEecCChHHHHHHHHHhcCCCce
Confidence 455677542 4555566666765 577 79999999988877732 3542 1111112233332222 1 24689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|. +.+..++++|++||.+++..
T Consensus 234 ~v-i~~~G~--~~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 234 LI-LDCIGG--SYWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp EE-EESSCG--GGHHHHHHHEEEEEEEEECC
T ss_pred EE-EECCCc--hHHHHHHHhccCCCEEEEEe
Confidence 87 465565 46778899999999887753
No 381
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=73.19 E-value=6.8 Score=39.98 Aligned_cols=96 Identities=17% Similarity=0.246 Sum_probs=58.6
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fD 196 (581)
.+.+||-.- +|.|...+.+++. .|+ +|++.|.+++..+.+++ .+.+ ..+.....|....+.. ....+|
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~-~Ga-~Vi~~~~~~~~~~~~~~----~ga~--~~~d~~~~~~~~~~~~~~~~~~~D 241 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARA-YGL-KILGTAGTEEGQKIVLQ----NGAH--EVFNHREVNYIDKIKKYVGEKGID 241 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----TTCS--EEEETTSTTHHHHHHHHHCTTCEE
T ss_pred CcCEEEEECCCChHHHHHHHHHHH-CCC-EEEEEeCChhHHHHHHH----cCCC--EEEeCCCchHHHHHHHHcCCCCcE
Confidence 355666544 4566666777776 577 69999999988776543 3542 1111112233332222 134689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+| +|.-|. +.+..++++|+++|.+++..
T Consensus 242 ~v-i~~~G~--~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 242 II-IEMLAN--VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp EE-EESCHH--HHHHHHHHHEEEEEEEEECC
T ss_pred EE-EECCCh--HHHHHHHHhccCCCEEEEEe
Confidence 87 455553 46778899999999887653
No 382
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=73.12 E-value=5.7 Score=40.77 Aligned_cols=95 Identities=17% Similarity=0.171 Sum_probs=58.1
Q ss_pred CCCeEEEe--cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 121 KPPRVLEA--LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDa--fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
.+.+||=. -++.|...+.+|+. .|+ +|++.+ ++...+.+ +..|.+ .-+.....|....+... ..+|+|
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~-~Ga-~Vi~~~-~~~~~~~~----~~lGa~--~v~~~~~~~~~~~~~~~-~g~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKA-WDA-HVTAVC-SQDASELV----RKLGAD--DVIDYKSGSVEEQLKSL-KPFDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTC-EEEEEE-CGGGHHHH----HHTTCS--EEEETTSSCHHHHHHTS-CCBSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHh-CCC-EEEEEe-ChHHHHHH----HHcCCC--EEEECCchHHHHHHhhc-CCCCEE
Confidence 35566654 45677777888886 587 688888 66655555 334643 11111122333333332 469987
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|.+..-+..+++++++||.+.+.
T Consensus 253 -id~~g~~~~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 253 -LDNVGGSTETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp -EESSCTTHHHHGGGGBCSSSCCEEEES
T ss_pred -EECCCChhhhhHHHHHhhcCCcEEEEe
Confidence 577776534457788899999988764
No 383
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=72.11 E-value=9.1 Score=38.44 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=61.1
Q ss_pred CCCeEEEecC-cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCcccE
Q 047386 121 KPPRVLEALS-ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafs-gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fDv 197 (581)
.+.+||=.-+ +.|+.++.+|+.. +..+|++.|.+++-.++++ ..|.+ .-+.....|....+.. ....+|+
T Consensus 163 ~g~~VlV~GaG~~g~~a~~~a~~~-~g~~Vi~~~~~~~r~~~~~----~~Ga~--~~i~~~~~~~~~~v~~~t~g~g~d~ 235 (348)
T 4eez_A 163 PGDWQVIFGAGGLGNLAIQYAKNV-FGAKVIAVDINQDKLNLAK----KIGAD--VTINSGDVNPVDEIKKITGGLGVQS 235 (348)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT-SCCEEEEEESCHHHHHHHH----HTTCS--EEEEC-CCCHHHHHHHHTTSSCEEE
T ss_pred CCCEEEEEcCCCccHHHHHHHHHh-CCCEEEEEECcHHHhhhhh----hcCCe--EEEeCCCCCHHHHhhhhcCCCCceE
Confidence 4556665433 3456666777653 5678999999998766554 45553 2222333454444333 2345787
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
++.+.-+ ...+..++++++++|.+.+..
T Consensus 236 ~~~~~~~--~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 236 AIVCAVA--RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp EEECCSC--HHHHHHHHHTEEEEEEEEECC
T ss_pred EEEeccC--cchhheeheeecCCceEEEEe
Confidence 7777643 356778899999999987754
No 384
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=72.02 E-value=1.8 Score=43.94 Aligned_cols=96 Identities=17% Similarity=0.184 Sum_probs=60.4
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcE-EEEehhHHHHHhh-CCCcccE
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKV-ESHLADARVYMLT-HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v-~v~~~DA~~~l~~-~~~~fDv 197 (581)
.+.+||-.- ++.|...+.+|+. .|+.+|++.|.++.-.+.+++- .+ .+ .....|....+.. ....||+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~-~Ga~~Vi~~~~~~~~~~~~~~l-----a~---~v~~~~~~~~~~~~~~~~~~g~D~ 234 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRA-SGAGPILVSDPNPYRLAFARPY-----AD---RLVNPLEEDLLEVVRRVTGSGVEV 234 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH-TTCCSEEEECSCHHHHGGGTTT-----CS---EEECTTTSCHHHHHHHHHSSCEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEECCCHHHHHHHHHh-----HH---hccCcCccCHHHHHHHhcCCCCCE
Confidence 455555433 5668888888886 5886799999999887776541 21 11 1111233222221 1346898
Q ss_pred EeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 198 VDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
| +|.-|. ...+..++++++++|.+.+..
T Consensus 235 v-id~~g~-~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 235 L-LEFSGN-EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp E-EECSCC-HHHHHHHHHHEEEEEEEEECC
T ss_pred E-EECCCC-HHHHHHHHHHHhcCCEEEEEe
Confidence 7 466554 356788899999999887653
No 385
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=71.67 E-value=14 Score=39.14 Aligned_cols=93 Identities=16% Similarity=0.215 Sum_probs=58.3
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe--hhH------------
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL--ADA------------ 184 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~--~DA------------ 184 (581)
.+.+||=.- ++.|..++.+|+. .|+ +|++.+.++.-.+.+++ .|.+ .+ +.. .|.
T Consensus 228 ~g~~VlV~GasG~vG~~avqlak~-~Ga-~vi~~~~~~~~~~~~~~----lGa~---~v-i~~~~~d~~~~~~~~~~~~~ 297 (456)
T 3krt_A 228 QGDNVLIWGASGGLGSYATQFALA-GGA-NPICVVSSPQKAEICRA----MGAE---AI-IDRNAEGYRFWKDENTQDPK 297 (456)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH-TTC-EEEEEESSHHHHHHHHH----HTCC---EE-EETTTTTCCSEEETTEECHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH-cCC-eEEEEECCHHHHHHHHh----hCCc---EE-EecCcCcccccccccccchH
Confidence 455666432 3456666777776 577 68888889988888754 4553 11 111 110
Q ss_pred ------HHHHhh-CCCcccEEeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 185 ------RVYMLT-HPKEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 185 ------~~~l~~-~~~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
..+... ....+|+| +|.-|. ..+..++++|++||.+.+.
T Consensus 298 ~~~~~~~~i~~~t~g~g~Dvv-id~~G~--~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 298 EWKRFGKRIRELTGGEDIDIV-FEHPGR--ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHTSCCEEEE-EECSCH--HHHHHHHHHEEEEEEEEES
T ss_pred HHHHHHHHHHHHhCCCCCcEE-EEcCCc--hhHHHHHHHhhCCcEEEEE
Confidence 122211 23579977 566664 6788899999999998774
No 386
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=71.52 E-value=67 Score=32.01 Aligned_cols=79 Identities=11% Similarity=0.108 Sum_probs=52.0
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.+.+|| +..|||.+|...++++ .|+ .|++.|.++...+.+.+.+...+.. .++.++..|... ++..
T Consensus 6 l~~k~vl-VTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~ 81 (319)
T 3ioy_A 6 FAGRTAF-VTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSG--PEVMGVQLDVASREGFKMAADEV 81 (319)
T ss_dssp CTTCEEE-EETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCG--GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEE-EcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCC--CeEEEEECCCCCHHHHHHHHHHH
Confidence 3455555 5667777777776554 576 5999999999988888888766642 357777777532 2211
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-...|+|+.-.
T Consensus 82 ~~~~g~id~lv~nA 95 (319)
T 3ioy_A 82 EARFGPVSILCNNA 95 (319)
T ss_dssp HHHTCCEEEEEECC
T ss_pred HHhCCCCCEEEECC
Confidence 123579887654
No 387
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=71.20 E-value=24 Score=29.73 Aligned_cols=54 Identities=11% Similarity=0.250 Sum_probs=37.4
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPY 203 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPy 203 (581)
.+|..+|-++...+.++.-++..+.. ..+ ....+....+.. ....||+|++|.-
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~~~~--~~v-~~~~~~~~a~~~l~~~~~dlii~D~~ 60 (144)
T 3kht_A 6 KRVLVVEDNPDDIALIRRVLDRKDIH--CQL-EFVDNGAKALYQVQQAKYDLIILDIG 60 (144)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTCC--EEE-EEESSHHHHHHHHTTCCCSEEEECTT
T ss_pred CEEEEEeCCHHHHHHHHHHHHhcCCC--eeE-EEECCHHHHHHHhhcCCCCEEEEeCC
Confidence 46999999999999999999988763 112 233344333322 2357999999973
No 388
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=70.87 E-value=5.6 Score=40.36 Aligned_cols=96 Identities=15% Similarity=0.127 Sum_probs=57.7
Q ss_pred CeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEe
Q 047386 123 PRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVD 199 (581)
Q Consensus 123 ~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvId 199 (581)
.+||-.- +|.|...+++++. .|+.+|++.|.+++..+.+++. .|.+ ..+.....|....+.. ....+|+|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~-~Ga~~Vi~~~~~~~~~~~~~~~---~g~~--~~~d~~~~~~~~~~~~~~~~~~d~vi 235 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHF-LGCSRVVGICGTHEKCILLTSE---LGFD--AAINYKKDNVAEQLRESCPAGVDVYF 235 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHH-TTCSEEEEEESCHHHHHHHHHT---SCCS--EEEETTTSCHHHHHHHHCTTCEEEEE
T ss_pred cEEEEECCCcHHHHHHHHHHHH-CCCCeEEEEeCCHHHHHHHHHH---cCCc--eEEecCchHHHHHHHHhcCCCCCEEE
Confidence 5666543 2445555566665 5887899999998887776542 3432 1111111233333322 223688874
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|.-|. ..+..++++|++||.+.+..
T Consensus 236 -~~~G~--~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 236 -DNVGG--NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp -ESCCH--HHHHHHHHTEEEEEEEEECC
T ss_pred -ECCCH--HHHHHHHHHhccCcEEEEEC
Confidence 55553 67888999999999887653
No 389
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=70.62 E-value=11 Score=38.16 Aligned_cols=92 Identities=23% Similarity=0.307 Sum_probs=60.3
Q ss_pred CCCeEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh--CCCccc
Q 047386 121 KPPRVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT--HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~--~~~~fD 196 (581)
.+.+||-.- ++.|...+.+|+. .|+ +|++. .++...+.+++ .|.+ .+. ...|....+.. ....||
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~-~Ga-~Vi~~-~~~~~~~~~~~----lGa~---~i~-~~~~~~~~~~~~~~~~g~D 218 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALA-RGA-RVFAT-ARGSDLEYVRD----LGAT---PID-ASREPEDYAAEHTAGQGFD 218 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTC-EEEEE-ECHHHHHHHHH----HTSE---EEE-TTSCHHHHHHHHHTTSCEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHH-CCC-EEEEE-eCHHHHHHHHH----cCCC---Eec-cCCCHHHHHHHHhcCCCce
Confidence 355676543 5667777888886 588 68888 88887776643 4653 232 22333333322 235799
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+| +|.-|. +.+..++++|+++|-+.+.
T Consensus 219 ~v-id~~g~--~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 219 LV-YDTLGG--PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp EE-EESSCT--HHHHHHHHHEEEEEEEEES
T ss_pred EE-EECCCc--HHHHHHHHHHhcCCeEEEE
Confidence 76 566664 6788899999999998764
No 390
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=70.54 E-value=22 Score=31.88 Aligned_cols=76 Identities=12% Similarity=0.185 Sum_probs=47.3
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCC--C-CCChHhHHHHHHhccCCCe
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDP--Y-GSPSVFLDSAIQSVADGGM 222 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDP--y-Gs~~~fld~A~~~l~~gGl 222 (581)
.+|..+|-++...+.++.-++..|.. + ....|....+.. ....||+|++|- + .....++...-+.-..--+
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~~----v-~~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~l~~~~~~~~i 82 (184)
T 3rqi_A 8 KNFLVIDDNEVFAGTLARGLERRGYA----V-RQAHNKDEALKLAGAEKFEFITVXLHLGNDSGLSLIAPLCDLQPDARI 82 (184)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----E-EEECSHHHHHHHHTTSCCSEEEECSEETTEESHHHHHHHHHHCTTCEE
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCCE----E-EEeCCHHHHHHHHhhCCCCEEEEeccCCCccHHHHHHHHHhcCCCCCE
Confidence 47999999999999999999987753 3 333444443322 235699999995 2 2234555543222222346
Q ss_pred EEEEe
Q 047386 223 LMCTA 227 (581)
Q Consensus 223 L~vTa 227 (581)
+.+|+
T Consensus 83 i~lt~ 87 (184)
T 3rqi_A 83 LVLTG 87 (184)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 66665
No 391
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=70.41 E-value=27 Score=28.59 Aligned_cols=76 Identities=17% Similarity=0.183 Sum_probs=46.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCC--CC-ChHhHHHHHHhccCCCe
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPY--GS-PSVFLDSAIQSVADGGM 222 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPy--Gs-~~~fld~A~~~l~~gGl 222 (581)
.+|..+|-++...+.++.-++..|.. +. ...|+...+.. ....||+|++|-. +. ...++.. ++...+--+
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~~~~~~~dlii~D~~~p~~~g~~~~~~-lr~~~~~~i 76 (120)
T 3f6p_A 3 KKILVVDDEKPIADILEFNLRKEGYE----VH-CAHDGNEAVEMVEELQPDLILLDIMLPNKDGVEVCRE-VRKKYDMPI 76 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHTTCCSEEEEETTSTTTHHHHHHHH-HHTTCCSCE
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCEE----EE-EeCCHHHHHHHHhhCCCCEEEEeCCCCCCCHHHHHHH-HHhcCCCCE
Confidence 46999999999999999999987763 32 33444443322 1347999999962 32 1233332 332233456
Q ss_pred EEEEec
Q 047386 223 LMCTAT 228 (581)
Q Consensus 223 L~vTaT 228 (581)
+.+|+.
T Consensus 77 i~~t~~ 82 (120)
T 3f6p_A 77 IMLTAK 82 (120)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 777763
No 392
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=70.04 E-value=28 Score=29.79 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=48.0
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEeeCCC--C-CChHhHHHHHHhccCCCe
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDLDPY--G-SPSVFLDSAIQSVADGGM 222 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLDPy--G-s~~~fld~A~~~l~~gGl 222 (581)
.+|..+|-++...+.++.-+...|.. +. ...+....+... ...||+|++|-. + ....++...-+.-..--+
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pi 78 (155)
T 1qkk_A 4 PSVFLIDDDRDLRKAMQQTLELAGFT----VS-SFASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPM 78 (155)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCE
T ss_pred CEEEEEeCCHHHHHHHHHHHHHcCcE----EE-EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCE
Confidence 46999999999999999999987763 33 344555544332 356999999962 2 223444433222223346
Q ss_pred EEEEec
Q 047386 223 LMCTAT 228 (581)
Q Consensus 223 L~vTaT 228 (581)
+.+|..
T Consensus 79 i~ls~~ 84 (155)
T 1qkk_A 79 ILVTGH 84 (155)
T ss_dssp EEEECG
T ss_pred EEEECC
Confidence 666653
No 393
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=69.55 E-value=4.2 Score=41.05 Aligned_cols=36 Identities=17% Similarity=0.199 Sum_probs=30.1
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHH
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEACR 163 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~ 163 (581)
.+.+|+|+|+|+.++... + ..+++||+|+..+.+-+
T Consensus 37 ~~yvEpF~GggaV~~~~~---~--~~~i~ND~n~~Lin~y~ 72 (284)
T 2dpm_A 37 NRYFEPFVGGGALFFDLA---P--KDAVINDFNAELINCYQ 72 (284)
T ss_dssp SCEEETTCTTCHHHHHHC---C--SEEEEEESCHHHHHHHH
T ss_pred CEEEeecCCccHHHHhhh---c--cceeeeecchHHHHHHH
Confidence 479999999999999763 2 57999999999887653
No 394
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=69.18 E-value=27 Score=28.07 Aligned_cols=73 Identities=16% Similarity=0.267 Sum_probs=45.0
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccC-C
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVAD-G 220 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~-g 220 (581)
+|..+|-++...+.++.-++..|.. +. ...+. ...+.. ..+|+|++|-. + ....++.. ++...+ -
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~~----v~-~~~~~~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~-l~~~~~~~ 74 (116)
T 3a10_A 3 RILVVDDEPNIRELLKEELQEEGYE----ID-TAENGEEALKKFFS--GNYDLVILDIEMPGISGLEVAGE-IRKKKKDA 74 (116)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHH-HHHHCTTC
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCE----EE-EeCCHHHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHH-HHccCCCC
Confidence 6899999999999999999987763 33 33333 334433 46999999962 2 22233332 332222 3
Q ss_pred CeEEEEec
Q 047386 221 GMLMCTAT 228 (581)
Q Consensus 221 GlL~vTaT 228 (581)
.++.+|+.
T Consensus 75 ~ii~~s~~ 82 (116)
T 3a10_A 75 KIILLTAY 82 (116)
T ss_dssp CEEEEESC
T ss_pred eEEEEECC
Confidence 46666653
No 395
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=69.09 E-value=13 Score=32.39 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=47.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH---HHHhhCCCcccEEeeCCC--CC-ChHhHHHHHHhccCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR---VYMLTHPKEFDVVDLDPY--GS-PSVFLDSAIQSVADG 220 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~---~~l~~~~~~fDvIdLDPy--Gs-~~~fld~A~~~l~~g 220 (581)
.+|..+|-++...+.++.-++..|+. +.....+.. ..+......||+|++|-. +. ...++...-+.-..-
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~----v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~ 112 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFN----IIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNA 112 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTC
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCe----EEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCC
Confidence 47999999999999999999988763 321344444 344332226999999963 22 234444322222233
Q ss_pred CeEEEEe
Q 047386 221 GMLMCTA 227 (581)
Q Consensus 221 GlL~vTa 227 (581)
-++.+|+
T Consensus 113 ~ii~ls~ 119 (157)
T 3hzh_A 113 RVIMISA 119 (157)
T ss_dssp CEEEEES
T ss_pred cEEEEec
Confidence 4666665
No 396
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=68.74 E-value=27 Score=30.11 Aligned_cols=116 Identities=11% Similarity=0.098 Sum_probs=62.3
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCC--C-CChHhHHHHHHhc---cC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPY--G-SPSVFLDSAIQSV---AD 219 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPy--G-s~~~fld~A~~~l---~~ 219 (581)
.+|..+|-++...+.++.-++..|.. +. ...|....+.. ....||+|++|-. + ....++.. ++.. ..
T Consensus 8 ~~ILivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~-lr~~~~~~~ 81 (154)
T 3gt7_A 8 GEILIVEDSPTQAEHLKHILEETGYQ----TE-HVRNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRW-LKGQPDLRT 81 (154)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCE----EE-EESSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHH-HHHSTTTTT
T ss_pred CcEEEEeCCHHHHHHHHHHHHHCCCE----EE-EeCCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHH-HHhCCCcCC
Confidence 57999999999999999999977753 32 23344333322 2357999999962 2 22234432 3322 22
Q ss_pred CCeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCC
Q 047386 220 GGMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKR 276 (581)
Q Consensus 220 gGlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r 276 (581)
--++.+|..+..... ..|+ +.|..-. ...-+....|+..|.+......+
T Consensus 82 ~pii~~s~~~~~~~~----~~~~-~~g~~~~---l~KP~~~~~l~~~i~~~l~~~~~ 130 (154)
T 3gt7_A 82 IPVILLTILSDPRDV----VRSL-ECGADDF---ITKPCKDVVLASHVKRLLSGVKR 130 (154)
T ss_dssp SCEEEEECCCSHHHH----HHHH-HHCCSEE---EESSCCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCChHHH----HHHH-HCCCCEE---EeCCCCHHHHHHHHHHHHHHHHh
Confidence 246777653222211 1121 2343221 11224455666666666665443
No 397
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=68.63 E-value=28 Score=28.57 Aligned_cols=75 Identities=13% Similarity=0.096 Sum_probs=45.7
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCC--CCC-ChHhHHHHHHhccCC-C
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDP--YGS-PSVFLDSAIQSVADG-G 221 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDP--yGs-~~~fld~A~~~l~~g-G 221 (581)
.+|..+|-++...+.++.-++..+.. +. ...+....+.. ....+|+|++|- ++. ...++.. ++...+. -
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~~----v~-~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~-l~~~~~~~~ 77 (126)
T 1dbw_A 4 YTVHIVDDEEPVRKSLAFMLTMNGFA----VK-MHQSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRN-LGDLKINIP 77 (126)
T ss_dssp CEEEEEESSHHHHHHHHHHHHHTTCE----EE-EESCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHH-HHHTTCCCC
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCcE----EE-EeCCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHH-HHhcCCCCC
Confidence 46999999999999999999887753 33 33444444322 124689999995 232 2234432 3333233 4
Q ss_pred eEEEEe
Q 047386 222 MLMCTA 227 (581)
Q Consensus 222 lL~vTa 227 (581)
++.+|+
T Consensus 78 ii~~s~ 83 (126)
T 1dbw_A 78 SIVITG 83 (126)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 666665
No 398
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=67.43 E-value=10 Score=37.81 Aligned_cols=91 Identities=16% Similarity=0.221 Sum_probs=54.7
Q ss_pred CCCeEEEe--cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEE
Q 047386 121 KPPRVLEA--LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVV 198 (581)
Q Consensus 121 ~~~~VLDa--fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvI 198 (581)
.+.+||=. -++.|..++.+|+. .|+ +|++.+ ++...++++ ..|.+ .+ +...+...+.. .-..||+|
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~-~Ga-~vi~~~-~~~~~~~~~----~lGa~---~~-i~~~~~~~~~~-~~~g~D~v 219 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQ-KGT-TVITTA-SKRNHAFLK----ALGAE---QC-INYHEEDFLLA-ISTPVDAV 219 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHH-TTC-EEEEEE-CHHHHHHHH----HHTCS---EE-EETTTSCHHHH-CCSCEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHH-cCC-EEEEEe-ccchHHHHH----HcCCC---EE-EeCCCcchhhh-hccCCCEE
Confidence 45667653 55667777778886 588 688887 444455554 35664 11 22121111221 12468976
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|. +.+..++++|+++|.+.+.
T Consensus 220 -~d~~g~--~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 220 -IDLVGG--DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -EESSCH--HHHHHHGGGEEEEEEEEEC
T ss_pred -EECCCc--HHHHHHHHhccCCCEEEEe
Confidence 566664 4458899999999988764
No 399
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=67.38 E-value=45 Score=31.91 Aligned_cols=74 Identities=19% Similarity=0.282 Sum_probs=49.0
Q ss_pred CCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHh---h
Q 047386 122 PPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YML---T 190 (581)
Q Consensus 122 ~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~---~ 190 (581)
+.++| ...|+|.+|...++++ .|+ +|++.|.++...+.+.+.+...+ .++.++..|... ++. .
T Consensus 7 ~k~vl-VTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 7 NATVA-VIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAG----GRIVARSLDARNEDEVTAFLNAADA 80 (252)
T ss_dssp SCEEE-EECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEE-EECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC----CeEEEEECcCCCHHHHHHHHHHHHh
Confidence 44455 5567777777666543 476 69999999998888888777654 357777777532 221 1
Q ss_pred CCCcccEEeeCC
Q 047386 191 HPKEFDVVDLDP 202 (581)
Q Consensus 191 ~~~~fDvIdLDP 202 (581)
. .+.|+++.-.
T Consensus 81 ~-g~id~lv~nA 91 (252)
T 3h7a_A 81 H-APLEVTIFNV 91 (252)
T ss_dssp H-SCEEEEEECC
T ss_pred h-CCceEEEECC
Confidence 2 4689887554
No 400
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=67.28 E-value=61 Score=31.88 Aligned_cols=77 Identities=18% Similarity=0.168 Sum_probs=51.6
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.+.+|| +..|||.+|...++++ .|+ .|++.|.++...+.+.+.+...+. ++.++..|... ++..
T Consensus 29 l~gk~vl-VTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~----~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAV-VTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGF----DAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEE-EETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC----CEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEE-EeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC----ceEEEEccCCCHHHHHHHHHHH
Confidence 4566666 5677788887776654 575 599999999998888877776553 46777776532 2221
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-...|+|+.-.
T Consensus 103 ~~~~g~id~lvnnA 116 (301)
T 3tjr_A 103 FRLLGGVDVVFSNA 116 (301)
T ss_dssp HHHHSSCSEEEECC
T ss_pred HHhCCCCCEEEECC
Confidence 113679987664
No 401
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=67.25 E-value=24 Score=29.00 Aligned_cols=75 Identities=8% Similarity=0.038 Sum_probs=46.0
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCCC--C-C-ChHhHHHHHHhcc-
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDPY--G-S-PSVFLDSAIQSVA- 218 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDPy--G-s-~~~fld~A~~~l~- 218 (581)
.+|..+|-++...+.++.-++..|.. +. ...+. ...+... ..||+|++|-. + . ...++.. ++...
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~~-~~~dlvi~d~~l~~~~~g~~~~~~-l~~~~~ 78 (132)
T 2rdm_A 6 VTILLADDEAILLLDFESTLTDAGFL----VT-AVSSGAKAIEMLKSG-AAIDGVVTDIRFCQPPDGWQVARV-AREIDP 78 (132)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHTT-CCCCEEEEESCCSSSSCHHHHHHH-HHHHCT
T ss_pred ceEEEEcCcHHHHHHHHHHHHHcCCE----EE-EECCHHHHHHHHHcC-CCCCEEEEeeeCCCCCCHHHHHHH-HHhcCC
Confidence 46999999999999999999977763 33 23333 3344321 26999999962 2 2 2234443 33332
Q ss_pred CCCeEEEEec
Q 047386 219 DGGMLMCTAT 228 (581)
Q Consensus 219 ~gGlL~vTaT 228 (581)
.-.++.+|+.
T Consensus 79 ~~~ii~~s~~ 88 (132)
T 2rdm_A 79 NMPIVYISGH 88 (132)
T ss_dssp TCCEEEEESS
T ss_pred CCCEEEEeCC
Confidence 3346666653
No 402
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=66.84 E-value=6.5 Score=39.80 Aligned_cols=95 Identities=22% Similarity=0.236 Sum_probs=59.2
Q ss_pred CCCeEEEecCc--ccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe--hhHHHHHhh-CC-Cc
Q 047386 121 KPPRVLEALSA--SGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL--ADARVYMLT-HP-KE 194 (581)
Q Consensus 121 ~~~~VLDafsg--SG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~--~DA~~~l~~-~~-~~ 194 (581)
.+.+||-.-+| .|...+.+++...|+ +|++.|.+++..+.+++ .+.+ . .+.. .|....+.. .. ..
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga-~Vi~~~~~~~~~~~~~~----~g~~---~-~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGA-TIIGVDVREEAVEAAKR----AGAD---Y-VINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCC-EEEEEESSHHHHHHHHH----HTCS---E-EEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCC-eEEEEcCCHHHHHHHHH----hCCC---E-EecCCCccHHHHHHHHhcCCC
Confidence 45677766554 666777777763277 69999999998887753 3542 1 1222 222222222 22 37
Q ss_pred ccEEeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 195 FDVVDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 195 fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|+|+ |--|. ...+..++++|+++|.+.+.
T Consensus 241 ~d~vi-~~~g~-~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVI-DLNNS-EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEE-ESCCC-HHHHTTGGGGEEEEEEEEEC
T ss_pred ceEEE-ECCCC-HHHHHHHHHHHhcCCEEEEE
Confidence 89874 55454 24677789999999988764
No 403
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=66.64 E-value=64 Score=30.97 Aligned_cols=78 Identities=18% Similarity=0.161 Sum_probs=50.9
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.+.+|| +..|+|..|...++++ .|+ .|++.+.++...+.+.+.+...+.. .++.++..|... ++..
T Consensus 30 l~~k~vl-VTGasggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~ 105 (279)
T 1xg5_A 30 WRDRLAL-VTGASGGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYP--GTLIPYRCDLSNEEDILSMFSAI 105 (279)
T ss_dssp GTTCEEE-EESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCS--SEEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEE-EECCCchHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCC--ceEEEEEecCCCHHHHHHHHHHH
Confidence 4455555 6688888888776554 465 6999999998888777777765543 356777766532 2211
Q ss_pred --CCCcccEEeeC
Q 047386 191 --HPKEFDVVDLD 201 (581)
Q Consensus 191 --~~~~fDvIdLD 201 (581)
.-..+|+|+.-
T Consensus 106 ~~~~g~iD~vi~~ 118 (279)
T 1xg5_A 106 RSQHSGVDICINN 118 (279)
T ss_dssp HHHHCCCSEEEEC
T ss_pred HHhCCCCCEEEEC
Confidence 11357988754
No 404
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=66.60 E-value=3 Score=42.67 Aligned_cols=92 Identities=15% Similarity=0.151 Sum_probs=56.5
Q ss_pred CCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCH---HHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccE
Q 047386 122 PPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDK---ASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDV 197 (581)
Q Consensus 122 ~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~---~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDv 197 (581)
+.+||-.- +|.|...+.+|+. .|+ +|++.|.++ +-.+.+++ .|.+ .+ ...|....+......+|+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~-~Ga-~Vi~~~~~~~~~~~~~~~~~----~ga~---~v--~~~~~~~~~~~~~~~~d~ 249 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT-YGL-EVWMANRREPTEVEQTVIEE----TKTN---YY--NSSNGYDKLKDSVGKFDV 249 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH-HTC-EEEEEESSCCCHHHHHHHHH----HTCE---EE--ECTTCSHHHHHHHCCEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCC-EEEEEeCCccchHHHHHHHH----hCCc---ee--chHHHHHHHHHhCCCCCE
Confidence 55555433 5567777788876 478 899999998 66666643 3542 22 111211112111246898
Q ss_pred EeeCCCCCChHhH-HHHHHhccCCCeEEEE
Q 047386 198 VDLDPYGSPSVFL-DSAIQSVADGGMLMCT 226 (581)
Q Consensus 198 IdLDPyGs~~~fl-d~A~~~l~~gGlL~vT 226 (581)
| +|.-|.+. .+ ..++++++++|.+.+.
T Consensus 250 v-id~~g~~~-~~~~~~~~~l~~~G~iv~~ 277 (366)
T 2cdc_A 250 I-IDATGADV-NILGNVIPLLGRNGVLGLF 277 (366)
T ss_dssp E-EECCCCCT-HHHHHHGGGEEEEEEEEEC
T ss_pred E-EECCCChH-HHHHHHHHHHhcCCEEEEE
Confidence 7 46656543 45 8889999999988765
No 405
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=66.29 E-value=4 Score=40.98 Aligned_cols=35 Identities=11% Similarity=0.151 Sum_probs=29.0
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHH
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEAC 162 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i 162 (581)
.+.+|+|+|+|+.++... ...+++||+|+..+.+-
T Consensus 29 ~~yvEpF~Ggg~V~~~~~-----~~~~i~ND~n~~lin~y 63 (278)
T 2g1p_A 29 ECLVEPFVGAGSVFLNTD-----FSRYILADINSDLISLY 63 (278)
T ss_dssp SEEEETTCTTCHHHHTCC-----CSEEEEEESCHHHHHHH
T ss_pred CeEEeeccCccHHHHhhc-----ccceEEEeccHHHHHHH
Confidence 489999999999988642 36799999999988653
No 406
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=66.27 E-value=2.3 Score=34.71 Aligned_cols=31 Identities=23% Similarity=0.674 Sum_probs=20.7
Q ss_pred EEEEcCCCCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCccccc
Q 047386 312 YVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMG 362 (581)
Q Consensus 312 ~v~~C~~C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~~~~~ 362 (581)
.|+-|+ |+.++...-+.. ...|+ ||..+++.
T Consensus 3 ~vv~C~-C~~~~~~~~~~k------------------T~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 3 IIFRCD-CGRALYSREGAK------------------TRKCV-CGRTVNVK 33 (71)
T ss_dssp EEEEET-TSCCEEEETTCS------------------EEEET-TTEEEECC
T ss_pred EEEECC-CCCEEEEcCCCc------------------EEECC-CCCeeeec
Confidence 467899 998765433221 13699 99988764
No 407
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=65.46 E-value=55 Score=26.80 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=36.7
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++..++..|.. +. ...|+...+.. ....+|+|++|-
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~~g~~----v~-~~~~~~~al~~l~~~~~dlvllD~ 54 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKKEGYE----VI-EAENGQIALEKLSEFTPDLIVLXI 54 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHTTBCCSEEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcE----EE-EeCCHHHHHHHHHhcCCCEEEEec
Confidence 36999999999999999999988763 32 34444444322 235799999995
No 408
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=65.16 E-value=27 Score=28.98 Aligned_cols=52 Identities=21% Similarity=0.197 Sum_probs=36.7
Q ss_pred ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe--hhHHHHHhhCCCcccEEeeCC
Q 047386 146 IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL--ADARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 146 a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~--~DA~~~l~~~~~~fDvIdLDP 202 (581)
-.+|..+|-++...+.++.-++..|+. +.... .++...+.. ...||+|++|-
T Consensus 7 ~~~ilivdd~~~~~~~l~~~L~~~g~~----v~~~~~~~~a~~~~~~-~~~~dlvi~D~ 60 (136)
T 3hdv_A 7 RPLVLVVDDNAVNREALILYLKSRGID----AVGADGAEEARLYLHY-QKRIGLMITDL 60 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCC----EEEESSHHHHHHHHHH-CTTEEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCce----EEEeCCHHHHHHHHHh-CCCCcEEEEec
Confidence 357999999999999999999988764 32221 233344433 23499999996
No 409
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=65.15 E-value=16 Score=30.64 Aligned_cols=49 Identities=18% Similarity=0.272 Sum_probs=36.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|+. +. ...+ |...+. ...||+|++|-
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~--~~~~dlvi~d~ 56 (142)
T 2qxy_A 5 PTVMVVDESRITFLAVKNALEKDGFN----VI-WAKNEQEAFTFLR--REKIDLVFVDV 56 (142)
T ss_dssp CEEEEECSCHHHHHHHHHHHGGGTCE----EE-EESSHHHHHHHHT--TSCCSEEEEEC
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCCE----EE-EECCHHHHHHHHh--ccCCCEEEEeC
Confidence 47999999999999999999877763 33 3333 344443 34799999997
No 410
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=64.74 E-value=45 Score=27.37 Aligned_cols=73 Identities=16% Similarity=0.080 Sum_probs=43.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCCC--CC-ChHhHHHHHHhc---
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDPY--GS-PSVFLDSAIQSV--- 217 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDPy--Gs-~~~fld~A~~~l--- 217 (581)
.+|..+|-++...+.++.-++ .+.. +. ...| |...+.. ..||+|++|-. +. ...++.. ++..
T Consensus 5 ~~ilivdd~~~~~~~l~~~l~-~~~~----v~-~~~~~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~-l~~~~~~ 75 (133)
T 3nhm_A 5 PKVLIVENSWTMRETLRLLLS-GEFD----CT-TAADGASGLQQALA--HPPDVLISDVNMDGMDGYALCGH-FRSEPTL 75 (133)
T ss_dssp CEEEEECSCHHHHHHHHHHHT-TTSE----EE-EESSHHHHHHHHHH--SCCSEEEECSSCSSSCHHHHHHH-HHHSTTT
T ss_pred CEEEEEcCCHHHHHHHHHHHh-CCcE----EE-EECCHHHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHH-HHhCCcc
Confidence 479999999999999988777 5542 32 3333 3444443 46999999963 22 2234443 3322
Q ss_pred cCCCeEEEEec
Q 047386 218 ADGGMLMCTAT 228 (581)
Q Consensus 218 ~~gGlL~vTaT 228 (581)
..--++.+|+.
T Consensus 76 ~~~pii~~s~~ 86 (133)
T 3nhm_A 76 KHIPVIFVSGY 86 (133)
T ss_dssp TTCCEEEEESC
T ss_pred CCCCEEEEeCC
Confidence 12346666653
No 411
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=64.58 E-value=1e+02 Score=29.52 Aligned_cols=78 Identities=18% Similarity=0.192 Sum_probs=48.3
Q ss_pred CCCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCcEEEEehhH
Q 047386 119 QLKPPRVLEALSASGLRALRYAREV--EGIGQVVALDND------------KASVEACRRNIKFNGSVACSKVESHLADA 184 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s------------~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA 184 (581)
.+.+++|| ...|+|.+|...++++ .|+ +|+++|.+ ++..+...+.+...+. ++.++..|.
T Consensus 10 ~l~gk~vl-VTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~D~ 83 (278)
T 3sx2_A 10 PLTGKVAF-ITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGS----RIVARQADV 83 (278)
T ss_dssp TTTTCEEE-EESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTC----CEEEEECCT
T ss_pred CCCCCEEE-EECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCC----eEEEEeCCC
Confidence 34566665 5667777777666544 475 59999987 6776666666665553 577777775
Q ss_pred HH------HHhh---CCCcccEEeeCC
Q 047386 185 RV------YMLT---HPKEFDVVDLDP 202 (581)
Q Consensus 185 ~~------~l~~---~~~~fDvIdLDP 202 (581)
.. ++.. .-.+.|+++.--
T Consensus 84 ~~~~~v~~~~~~~~~~~g~id~lv~nA 110 (278)
T 3sx2_A 84 RDRESLSAALQAGLDELGRLDIVVANA 110 (278)
T ss_dssp TCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 32 2221 113679987654
No 412
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=64.34 E-value=4.6 Score=41.22 Aligned_cols=95 Identities=17% Similarity=0.119 Sum_probs=58.1
Q ss_pred CCCeEEEe-cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEA-LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDa-fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+||=. .++.|..++.+|+. .|+ +|++.|.+++-.+.+++ ..|.+ .+ +...|. ..+......||+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~-~Ga-~Vi~~~~~~~~~~~~~~---~lGa~---~v-i~~~~~-~~~~~~~~g~D~v- 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKA-MGH-HVTVISSSNKKREEALQ---DLGAD---DY-VIGSDQ-AKMSELADSLDYV- 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-HTC-EEEEEESSTTHHHHHHT---TSCCS---CE-EETTCH-HHHHHSTTTEEEE-
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCC-eEEEEeCChHHHHHHHH---HcCCc---ee-eccccH-HHHHHhcCCCCEE-
Confidence 45555543 34556777777876 477 79999999877666542 24543 22 222232 2222223468987
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|.-|.+ ..+..+++++++||.+.+..
T Consensus 249 id~~g~~-~~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 249 IDTVPVH-HALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp EECCCSC-CCSHHHHTTEEEEEEEEECS
T ss_pred EECCCCh-HHHHHHHHHhccCCEEEEeC
Confidence 5665543 24667899999999887653
No 413
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=64.25 E-value=18 Score=29.80 Aligned_cols=49 Identities=20% Similarity=0.267 Sum_probs=35.9
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...+ |...+.. ..||+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlii~D~ 55 (127)
T 3i42_A 4 QQALIVEDYQAAAETFKELLEMLGFQ----AD-YVMSGTDALHAMST--RGYDAVFIDL 55 (127)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTEE----EE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred ceEEEEcCCHHHHHHHHHHHHHcCCC----EE-EECCHHHHHHHHHh--cCCCEEEEeC
Confidence 36999999999999999999988753 32 2333 3444443 4699999996
No 414
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=64.03 E-value=3.7 Score=41.89 Aligned_cols=93 Identities=12% Similarity=0.068 Sum_probs=58.6
Q ss_pred CCCeEEEec-CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh---hHHHHHhhCCCccc
Q 047386 121 KPPRVLEAL-SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA---DARVYMLTHPKEFD 196 (581)
Q Consensus 121 ~~~~VLDaf-sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~---DA~~~l~~~~~~fD 196 (581)
.+.+||-.- ++.|...+.+|+. .|+ +|++.|.++.-.+.+++ .|.+ .+ +... |....+ ...||
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~---~v-~~~~~~~~~~~~~---~~~~D 245 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKA-MGA-ETYVISRSSRKREDAMK----MGAD---HY-IATLEEGDWGEKY---FDTFD 245 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-HTC-EEEEEESSSTTHHHHHH----HTCS---EE-EEGGGTSCHHHHS---CSCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCC-EEEEEcCCHHHHHHHHH----cCCC---EE-EcCcCchHHHHHh---hcCCC
Confidence 345555533 6668888888886 477 59999999988877764 4643 22 2111 322222 24799
Q ss_pred EEeeCCCCC-ChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGS-PSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs-~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|+ |.-|. +...+..++++|++||.+.+..
T Consensus 246 ~vi-d~~g~~~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 246 LIV-VCASSLTDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEE-ECCSCSTTCCTTTGGGGEEEEEEEEECC
T ss_pred EEE-ECCCCCcHHHHHHHHHHhcCCCEEEEec
Confidence 874 55443 0134566789999999887643
No 415
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=64.00 E-value=28 Score=28.93 Aligned_cols=50 Identities=22% Similarity=0.163 Sum_probs=35.9
Q ss_pred cEEEEEeCCHHHHHHHHHHHHH-hCCCCCCcEEEEeh---hHHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKF-NGSVACSKVESHLA---DARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~-N~~~~~~~v~v~~~---DA~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++. .++. .+. ... +|...+.. ..||+|++|-
T Consensus 9 ~~iLivdd~~~~~~~l~~~L~~~~~~~---~v~-~~~~~~~a~~~l~~--~~~dlii~d~ 62 (143)
T 3cnb_A 9 FSILIIEDDKEFADMLTQFLENLFPYA---KIK-IAYNPFDAGDLLHT--VKPDVVMLDL 62 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCTTC---EEE-EECSHHHHHHHHHH--TCCSEEEEET
T ss_pred ceEEEEECCHHHHHHHHHHHHhccCcc---EEE-EECCHHHHHHHHHh--cCCCEEEEec
Confidence 4699999999999999999998 6653 122 233 34444543 3699999996
No 416
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=63.96 E-value=8.4 Score=39.46 Aligned_cols=95 Identities=16% Similarity=0.113 Sum_probs=57.1
Q ss_pred CCCeEEEe-cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEe
Q 047386 121 KPPRVLEA-LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVD 199 (581)
Q Consensus 121 ~~~~VLDa-fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvId 199 (581)
.+.+||=. .++.|...+.+|+. .|+ +|++.|.+++..+.+++ ..|.+ . .+...|.. .+......+|+|+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~-~Ga-~Vi~~~~~~~~~~~~~~---~lGa~---~-v~~~~~~~-~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKA-FGS-KVTVISTSPSKKEEALK---NFGAD---S-FLVSRDQE-QMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-TTC-EEEEEESCGGGHHHHHH---TSCCS---E-EEETTCHH-HHHHTTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCC-EEEEEeCCHHHHHHHHH---hcCCc---e-EEeccCHH-HHHHhhCCCCEEE
Confidence 45565553 24456667777776 577 79999999887766542 23432 2 22222322 2222224689874
Q ss_pred eCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 200 LDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 200 LDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
|.-|.+ ..+..++++++++|.+.+..
T Consensus 257 -d~~g~~-~~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 257 -DTVSAV-HPLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp -ECCSSC-CCSHHHHHHEEEEEEEEECC
T ss_pred -ECCCcH-HHHHHHHHHHhcCCEEEEEc
Confidence 555542 23567899999999887654
No 417
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=63.96 E-value=32 Score=29.38 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=35.7
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...+....+.. ....||+|++|-
T Consensus 8 ~~iLivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~~~~dlvi~d~ 59 (154)
T 2rjn_A 8 YTVMLVDDEQPILNSLKRLIKRLGCN----II-TFTSPLDALEALKGTSVQLVISDM 59 (154)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCE----EE-EESCHHHHHHHHTTSCCSEEEEES
T ss_pred CeEEEEcCCHHHHHHHHHHHHHcCCe----EE-EeCCHHHHHHHHhcCCCCEEEEec
Confidence 46999999999999999999876653 33 33343333322 134699999996
No 418
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=63.76 E-value=54 Score=32.25 Aligned_cols=76 Identities=13% Similarity=0.124 Sum_probs=46.5
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH------HHHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR------VYMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~------~~l~~- 190 (581)
++|+++|=- .|++.+|...++.+ .|+ +|+++|.+++..+-..+-+...+. ++..+..|+. .++..
T Consensus 7 L~gKvalVT-Gas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~----~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 7 LTGKTALVT-GSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGY----DAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp CTTCEEEET-TCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTC----CEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEe-CCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCC----cEEEEEeeCCCHHHHHHHHHHH
Confidence 456666654 45555554443322 476 599999999988887777776664 4666766653 22222
Q ss_pred --CCCcccEEeeC
Q 047386 191 --HPKEFDVVDLD 201 (581)
Q Consensus 191 --~~~~fDvIdLD 201 (581)
.-.+.|+++-.
T Consensus 81 ~~~~G~iDiLVNN 93 (255)
T 4g81_D 81 DAEGIHVDILINN 93 (255)
T ss_dssp HHTTCCCCEEEEC
T ss_pred HHHCCCCcEEEEC
Confidence 22456887654
No 419
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=63.49 E-value=21 Score=28.90 Aligned_cols=73 Identities=16% Similarity=0.176 Sum_probs=44.2
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccC-C
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVAD-G 220 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~-g 220 (581)
+|..+|-++...+.++.-++..|.. +.....+ |...+.. ..+|+|++|-. + ....++.. ++...+ -
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~g~~----vv~~~~~~~~a~~~~~~--~~~dlil~D~~l~~~~g~~~~~~-l~~~~~~~ 76 (120)
T 1tmy_A 4 RVLIVDDAAFMRMMLKDIITKAGYE----VAGEATNGREAVEKYKE--LKPDIVTMDITMPEMNGIDAIKE-IMKIDPNA 76 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHH--HCCSEEEEECSCGGGCHHHHHHH-HHHHCTTC
T ss_pred eEEEEcCcHHHHHHHHHHHhhcCcE----EEEEECCHHHHHHHHHh--cCCCEEEEeCCCCCCcHHHHHHH-HHhhCCCC
Confidence 6899999999999999999877652 2223333 4444443 35899999962 2 22234433 322222 3
Q ss_pred CeEEEEe
Q 047386 221 GMLMCTA 227 (581)
Q Consensus 221 GlL~vTa 227 (581)
-++.+|+
T Consensus 77 ~ii~~s~ 83 (120)
T 1tmy_A 77 KIIVCSA 83 (120)
T ss_dssp CEEEEEC
T ss_pred eEEEEeC
Confidence 4666665
No 420
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=63.43 E-value=26 Score=29.32 Aligned_cols=76 Identities=11% Similarity=0.069 Sum_probs=48.0
Q ss_pred cEEEEEeCCHHHHHHHHHHHHH-hCCCCCCcEEEEehhHHHHHhhC-C-CcccEEeeCCCCC----ChHhHHHHHH--hc
Q 047386 147 GQVVALDNDKASVEACRRNIKF-NGSVACSKVESHLADARVYMLTH-P-KEFDVVDLDPYGS----PSVFLDSAIQ--SV 217 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~-N~~~~~~~v~v~~~DA~~~l~~~-~-~~fDvIdLDPyGs----~~~fld~A~~--~l 217 (581)
.+|..+|-++...+.++.-++. .++. +. ...|....+... . ..||+|++|-.-. ...++...-+ ..
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~~~~~----v~-~~~~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~ 79 (140)
T 3lua_A 5 GTVLLIDYFEYEREKTKIIFDNIGEYD----FI-EVENLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRT 79 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCCCE----EE-EECSHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGG
T ss_pred CeEEEEeCCHHHHHHHHHHHHhccCcc----EE-EECCHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCccc
Confidence 4799999999999999999998 6663 33 445555555332 3 5799999996321 1233333222 22
Q ss_pred cCCCeEEEEe
Q 047386 218 ADGGMLMCTA 227 (581)
Q Consensus 218 ~~gGlL~vTa 227 (581)
..--+|.+|+
T Consensus 80 ~~~~ii~ls~ 89 (140)
T 3lua_A 80 ANTPVIIATK 89 (140)
T ss_dssp TTCCEEEEES
T ss_pred CCCCEEEEeC
Confidence 3345666665
No 421
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=63.32 E-value=25 Score=29.19 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=47.3
Q ss_pred ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC--C-C-CChHhHHHHHHhcc
Q 047386 146 IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP--Y-G-SPSVFLDSAIQSVA 218 (581)
Q Consensus 146 a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP--y-G-s~~~fld~A~~~l~ 218 (581)
..+|..+|-++...+.++.-++..|+. +.....+ |..++.. ..||+|++|- + + ....++.. ++...
T Consensus 9 ~~~iLivdd~~~~~~~l~~~L~~~g~~----v~~~~~~~~~a~~~~~~--~~~dlii~d~~~~~~~~g~~~~~~-l~~~~ 81 (140)
T 3cg0_A 9 LPGVLIVEDGRLAAATLRIQLESLGYD----VLGVFDNGEEAVRCAPD--LRPDIALVDIMLCGALDGVETAAR-LAAGC 81 (140)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHHTCE----EEEEESSHHHHHHHHHH--HCCSEEEEESSCCSSSCHHHHHHH-HHHHS
T ss_pred CceEEEEECCHHHHHHHHHHHHHCCCe----eEEEECCHHHHHHHHHh--CCCCEEEEecCCCCCCCHHHHHHH-HHhCC
Confidence 357999999999999999999988763 3322333 4444443 3599999995 2 2 22344443 33223
Q ss_pred CCCeEEEEe
Q 047386 219 DGGMLMCTA 227 (581)
Q Consensus 219 ~gGlL~vTa 227 (581)
.--++.+|.
T Consensus 82 ~~~ii~ls~ 90 (140)
T 3cg0_A 82 NLPIIFITS 90 (140)
T ss_dssp CCCEEEEEC
T ss_pred CCCEEEEec
Confidence 445666665
No 422
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=62.98 E-value=37 Score=27.45 Aligned_cols=49 Identities=18% Similarity=0.254 Sum_probs=34.8
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++..++..|.. +. ...+ +..++.. ..+|+|++|-
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~----v~-~~~~~~~~~~~~~~--~~~dlvi~d~ 54 (122)
T 1zgz_A 3 HHIVIVEDEPVTQARLQSYFTQEGYT----VS-VTASGAGLREIMQN--QSVDLILLDI 54 (122)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred cEEEEEECCHHHHHHHHHHHHHCCCe----EE-EecCHHHHHHHHhc--CCCCEEEEeC
Confidence 36899999999999999999877753 32 2333 3333433 3689999995
No 423
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=62.53 E-value=42 Score=28.51 Aligned_cols=77 Identities=13% Similarity=0.118 Sum_probs=44.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCC--C-CChHhHHHHHHhcc-CCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPY--G-SPSVFLDSAIQSVA-DGG 221 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPy--G-s~~~fld~A~~~l~-~gG 221 (581)
-+|..+|-++...+.++.-++..+-. .......+....+.. ....||+|++|-- + ....++.. ++... .--
T Consensus 21 ~~iLivdd~~~~~~~l~~~L~~~~~~---~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~-l~~~~~~~~ 96 (150)
T 4e7p_A 21 MKVLVAEDQSMLRDAMCQLLTLQPDV---ESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEW-IRSEKLETK 96 (150)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTE---EEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHH-HHHTTCSCE
T ss_pred cEEEEEcCCHHHHHHHHHHHHhCCCc---EEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHH-HHHhCCCCe
Confidence 47999999999999999888865421 112233444443322 2356999999962 2 22344443 33222 234
Q ss_pred eEEEEe
Q 047386 222 MLMCTA 227 (581)
Q Consensus 222 lL~vTa 227 (581)
++.+|+
T Consensus 97 ii~ls~ 102 (150)
T 4e7p_A 97 VVVVTT 102 (150)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 556665
No 424
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=62.38 E-value=22 Score=29.28 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=35.7
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..+. .+ ....+...++......||+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~~~----~v-~~~~~~~~~~~~~~~~~dlvi~D~ 54 (135)
T 3eqz_A 4 NRVFIVDDDTLTCNLLKTIVEPIFG----NV-EAFQHPRAFLTLSLNKQDIIILDL 54 (135)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTCS----CE-EEESCHHHHTTSCCCTTEEEEEEC
T ss_pred ceEEEEeCCHHHHHHHHHHHHhhcc----ee-eeecCHHHHHHhhccCCCEEEEeC
Confidence 4699999999999999998886643 23 334445555443333399999996
No 425
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=62.32 E-value=3.5 Score=41.28 Aligned_cols=102 Identities=16% Similarity=0.173 Sum_probs=64.7
Q ss_pred eEEEecCcccHHHHHHhhh--c--C-C-ccEEEEEe-----CCHH-------------------HHHHHHH------HHH
Q 047386 124 RVLEALSASGLRALRYARE--V--E-G-IGQVVALD-----NDKA-------------------SVEACRR------NIK 167 (581)
Q Consensus 124 ~VLDafsgSG~rgIr~a~E--~--~-G-a~~V~anD-----~s~~-------------------Ave~i~~------Ni~ 167 (581)
.|+|+-...|.-.+.++.- + + + -.+|++.| -.+. -.+.+++ |.+
T Consensus 72 ~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~~~ 151 (257)
T 3tos_A 72 VIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHECSD 151 (257)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHTTS
T ss_pred eEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhhhh
Confidence 6999998888877765531 0 0 1 36788888 1110 0112222 111
Q ss_pred HhCCCCCCcEEEEehhHHHHHhh----C-CCcccEEeeCC--CCCChHhHHHHHHhccCCCeEEEE
Q 047386 168 FNGSVACSKVESHLADARVYMLT----H-PKEFDVVDLDP--YGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 168 ~N~~~~~~~v~v~~~DA~~~l~~----~-~~~fDvIdLDP--yGs~~~fld~A~~~l~~gGlL~vT 226 (581)
..+.. .++|+++.|++...|.. . ..+||+|++|= |.+....++..+..|++||+|++-
T Consensus 152 ~~g~~-~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~D 216 (257)
T 3tos_A 152 FFGHV-TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFD 216 (257)
T ss_dssp TTTTS-CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEES
T ss_pred hcCCC-CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEc
Confidence 22331 26899999999988754 2 34699999887 333345677788899999999884
No 426
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=62.27 E-value=18 Score=30.63 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=36.4
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhC-CCCCCcEEEEehhHHHHHhhC--C-CcccEEeeCCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNG-SVACSKVESHLADARVYMLTH--P-KEFDVVDLDPY 203 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~-~~~~~~v~v~~~DA~~~l~~~--~-~~fDvIdLDPy 203 (581)
.+|..+|-++...+.++.-++..| +. +.. ..+....+... . ..||+|++|--
T Consensus 21 ~~ilivdd~~~~~~~l~~~L~~~g~~~----v~~-~~~~~~~~~~~~~~~~~~dlvi~D~~ 76 (146)
T 4dad_A 21 INILVASEDASRLAHLARLVGDAGRYR----VTR-TVGRAAQIVQRTDGLDAFDILMIDGA 76 (146)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHCSCE----EEE-ECCCHHHHTTCHHHHTTCSEEEEECT
T ss_pred CeEEEEeCCHHHHHHHHHHHhhCCCeE----EEE-eCCHHHHHHHHHhcCCCCCEEEEeCC
Confidence 579999999999999999999887 53 322 33333222211 2 57999999973
No 427
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=61.98 E-value=59 Score=29.79 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=46.5
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH---HHHhhCCCcccEEeeCC--CCC-ChHhHHHHHHhcc-C
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR---VYMLTHPKEFDVVDLDP--YGS-PSVFLDSAIQSVA-D 219 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~---~~l~~~~~~fDvIdLDP--yGs-~~~fld~A~~~l~-~ 219 (581)
-+|..+|-++...+.++.-++..|.. +. ...|.. ..+.. ..+|+|++|- ++. ...++.. ++... .
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~~~~--~~~dlvllD~~l~~~~g~~~~~~-l~~~~~~ 79 (233)
T 1ys7_A 8 PRVLVVDDDSDVLASLERGLRLSGFE----VA-TAVDGAEALRSATE--NRPDAIVLDINMPVLDGVSVVTA-LRAMDND 79 (233)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEEESSCSSSCHHHHHHH-HHHTTCC
T ss_pred CeEEEEeCCHHHHHHHHHHHHhCCCE----EE-EECCHHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHH-HHhcCCC
Confidence 36999999999999999999987653 32 333443 34433 4699999996 232 2233332 33222 3
Q ss_pred CCeEEEEecc
Q 047386 220 GGMLMCTATD 229 (581)
Q Consensus 220 gGlL~vTaTD 229 (581)
-.++.+|+.+
T Consensus 80 ~~ii~lt~~~ 89 (233)
T 1ys7_A 80 VPVCVLSARS 89 (233)
T ss_dssp CCEEEEECCC
T ss_pred CCEEEEEcCC
Confidence 3567777643
No 428
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=61.71 E-value=43 Score=26.90 Aligned_cols=73 Identities=18% Similarity=0.171 Sum_probs=44.5
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCCC--CC-ChHhHHHHHHhcc-CC
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDPY--GS-PSVFLDSAIQSVA-DG 220 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDPy--Gs-~~~fld~A~~~l~-~g 220 (581)
+|..+|-++...+.++.-++..|.. +. ...+ |...+.. ..+|+|++|-- +. ...++.. ++... .-
T Consensus 2 ~ilivdd~~~~~~~l~~~l~~~g~~----v~-~~~~~~~a~~~~~~--~~~dlil~D~~l~~~~g~~~~~~-l~~~~~~~ 73 (121)
T 2pl1_A 2 RVLVVEDNALLRHHLKVQIQDAGHQ----VD-DAEDAKEADYYLNE--HIPDIAIVDLGLPDEDGLSLIRR-WRSNDVSL 73 (121)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHH-HHHTTCCS
T ss_pred eEEEEeCcHHHHHHHHHHHhhcCCE----EE-EeCCHHHHHHHHhc--cCCCEEEEecCCCCCCHHHHHHH-HHhcCCCC
Confidence 4889999999999999999877653 32 2333 3444443 36899999962 22 2233432 33222 33
Q ss_pred CeEEEEec
Q 047386 221 GMLMCTAT 228 (581)
Q Consensus 221 GlL~vTaT 228 (581)
.++.+|+.
T Consensus 74 ~ii~~s~~ 81 (121)
T 2pl1_A 74 PILVLTAR 81 (121)
T ss_dssp CEEEEESC
T ss_pred CEEEEecC
Confidence 46777653
No 429
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=61.33 E-value=32 Score=29.30 Aligned_cols=78 Identities=22% Similarity=0.159 Sum_probs=44.9
Q ss_pred cEEEEEeCCHHHHHHHHHHHHH-hCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCCC--C-CChHhHHHHHHhccCCC
Q 047386 147 GQVVALDNDKASVEACRRNIKF-NGSVACSKVESHLADARVYMLT-HPKEFDVVDLDPY--G-SPSVFLDSAIQSVADGG 221 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~-N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~gG 221 (581)
.+|..+|-++...+.++.-++. .+.. +.....+....+.. ....+|+|++|-. + ....++...-+.-..--
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~~~~~----v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ 81 (153)
T 3cz5_A 6 ARIMLVDDHPIVREGYRRLIERRPGYA----VVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAAR 81 (153)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTSTTEE----EEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCC
T ss_pred cEEEEECCcHHHHHHHHHHHhhCCCcE----EEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCe
Confidence 4699999999999999998875 3432 22134444333321 1346999999962 2 22344443222222334
Q ss_pred eEEEEec
Q 047386 222 MLMCTAT 228 (581)
Q Consensus 222 lL~vTaT 228 (581)
++.+|..
T Consensus 82 ii~ls~~ 88 (153)
T 3cz5_A 82 ILIFTMH 88 (153)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 6666653
No 430
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=61.20 E-value=34 Score=28.46 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=35.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...+. ...+.. ..+|+|++|-
T Consensus 4 ~~Ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~~~~--~~~dlvl~D~ 55 (132)
T 3crn_A 4 KRILIVDDDTAILDSTKQILEFEGYE----VE-IAATAGEGLAKIEN--EFFNLALFXI 55 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEECS
T ss_pred cEEEEEeCCHHHHHHHHHHHHHCCce----EE-EeCCHHHHHHHHhc--CCCCEEEEec
Confidence 46999999999999999999876653 33 34343 344433 4689999995
No 431
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=61.12 E-value=13 Score=37.53 Aligned_cols=97 Identities=18% Similarity=0.134 Sum_probs=59.9
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEE-ehhHHHHHhh-CCCccc
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESH-LADARVYMLT-HPKEFD 196 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~-~~DA~~~l~~-~~~~fD 196 (581)
.+.+||-.-+ |.|...+++++. .|+ +|++.|.++...+.+++ .+.+ ..+.+. ..|....+.. ....+|
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~-~Ga-~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~~~~~D 240 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKA-MGY-RVLGIDGGEGKEELFRS----IGGE--VFIDFTKEKDIVGAVLKATDGGAH 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHH-TTC-EEEEEECSTTHHHHHHH----TTCC--EEEETTTCSCHHHHHHHHHTSCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHH-CCC-cEEEEcCCHHHHHHHHH----cCCc--eEEecCccHhHHHHHHHHhCCCCC
Confidence 4567777665 566777777776 577 79999999887776654 3542 111111 1233333322 112689
Q ss_pred EEeeCCCCCChHhHHHHHHhccCCCeEEEEe
Q 047386 197 VVDLDPYGSPSVFLDSAIQSVADGGMLMCTA 227 (581)
Q Consensus 197 vIdLDPyGs~~~fld~A~~~l~~gGlL~vTa 227 (581)
+|+ |--|. ...+..++++|+++|.|.+..
T Consensus 241 ~vi-~~~g~-~~~~~~~~~~l~~~G~iv~~g 269 (347)
T 2hcy_A 241 GVI-NVSVS-EAAIEASTRYVRANGTTVLVG 269 (347)
T ss_dssp EEE-ECSSC-HHHHHHHTTSEEEEEEEEECC
T ss_pred EEE-ECCCc-HHHHHHHHHHHhcCCEEEEEe
Confidence 875 44443 357788899999999887643
No 432
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=61.00 E-value=27 Score=35.63 Aligned_cols=95 Identities=15% Similarity=0.128 Sum_probs=57.7
Q ss_pred CCCeEEEecC--cccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccE
Q 047386 121 KPPRVLEALS--ASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDV 197 (581)
Q Consensus 121 ~~~~VLDafs--gSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDv 197 (581)
.+.+||=.-+ +.|..++.+|+. .|+ +|++.. ++.-.++++ ..|.+ .-+.....|....+.. ....+|+
T Consensus 164 ~g~~VlV~Ga~G~vG~~a~qla~~-~Ga-~Vi~~~-~~~~~~~~~----~lGa~--~vi~~~~~~~~~~v~~~t~g~~d~ 234 (371)
T 3gqv_A 164 KPVYVLVYGGSTATATVTMQMLRL-SGY-IPIATC-SPHNFDLAK----SRGAE--EVFDYRAPNLAQTIRTYTKNNLRY 234 (371)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHH-TTC-EEEEEE-CGGGHHHHH----HTTCS--EEEETTSTTHHHHHHHHTTTCCCE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHH-CCC-EEEEEe-CHHHHHHHH----HcCCc--EEEECCCchHHHHHHHHccCCccE
Confidence 4556765443 478888888886 588 577764 777766654 35653 1111122343333332 2345998
Q ss_pred EeeCCCCCChHhHHHHHHhc-cCCCeEEEE
Q 047386 198 VDLDPYGSPSVFLDSAIQSV-ADGGMLMCT 226 (581)
Q Consensus 198 IdLDPyGs~~~fld~A~~~l-~~gGlL~vT 226 (581)
| +|.-|.+ ..++.++++| ++||.+.+.
T Consensus 235 v-~d~~g~~-~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 235 A-LDCITNV-ESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp E-EESSCSH-HHHHHHHHHSCTTCEEEEES
T ss_pred E-EECCCch-HHHHHHHHHhhcCCCEEEEE
Confidence 7 5776652 5677889999 589988763
No 433
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=60.60 E-value=24 Score=29.49 Aligned_cols=54 Identities=13% Similarity=0.221 Sum_probs=37.5
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe--hhHHHHHhhCC--------CcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHL--ADARVYMLTHP--------KEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~--~DA~~~l~~~~--------~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..+.. ..+.... .+|...+.... ..||+|++|-
T Consensus 7 ~~iLivdd~~~~~~~l~~~L~~~g~~--~~v~~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D~ 70 (149)
T 1k66_A 7 QPLLVVEDSDEDFSTFQRLLQREGVV--NPIYRCITGDQALDFLYQTGSYCNPDIAPRPAVILLDL 70 (149)
T ss_dssp SCEEEECCCHHHHHHHHHHHHHTTBC--SCEEEECSHHHHHHHHHTCCSSSCGGGCCCCSEEEECS
T ss_pred ccEEEEECCHHHHHHHHHHHHHcCCC--ceEEEECCHHHHHHHHHhcccccCcccCCCCcEEEEEC
Confidence 46999999999999999999988762 1233221 34455554311 5799999996
No 434
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=60.22 E-value=1.1e+02 Score=29.19 Aligned_cols=77 Identities=17% Similarity=0.113 Sum_probs=49.5
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.++++| ...|+|.+|...++++ .|+ +|++.|.++...+.+.+.+...+. ++.++..|... ++..
T Consensus 9 l~~k~vl-VTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~ 82 (264)
T 3ucx_A 9 LTDKVVV-ISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGR----RALSVGTDITDDAQVAHLVDET 82 (264)
T ss_dssp TTTCEEE-EESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTC----CEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCcEEE-EECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCC----cEEEEEcCCCCHHHHHHHHHHH
Confidence 4566666 5566666666555443 476 599999999998888887776553 46777776532 2221
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-.+.|+++.--
T Consensus 83 ~~~~g~id~lv~nA 96 (264)
T 3ucx_A 83 MKAYGRVDVVINNA 96 (264)
T ss_dssp HHHTSCCSEEEECC
T ss_pred HHHcCCCcEEEECC
Confidence 123679987654
No 435
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=60.00 E-value=4.3 Score=32.03 Aligned_cols=34 Identities=24% Similarity=0.554 Sum_probs=24.6
Q ss_pred EEEEcCCCCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCcccccccccccC
Q 047386 312 YVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGPIWSGR 369 (581)
Q Consensus 312 ~v~~C~~C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~~~~~GPlW~Gp 369 (581)
.+-.|+.|+.+.+ ...||.||+...++=|-=-.|
T Consensus 5 ~mr~C~~CgvYTL------------------------k~~CP~CG~~T~~~hParfSp 38 (60)
T 2apo_B 5 RMKKCPKCGLYTL------------------------KEICPKCGEKTVIPKPPKFSL 38 (60)
T ss_dssp CCEECTTTCCEES------------------------SSBCSSSCSBCBCCCCCCCCT
T ss_pred hceeCCCCCCEec------------------------cccCcCCCCcCCCCCCCCCCC
Confidence 3457999987643 135999999988887765555
No 436
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=59.94 E-value=6.7 Score=39.26 Aligned_cols=89 Identities=19% Similarity=0.263 Sum_probs=56.5
Q ss_pred eEEEec--CcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh-hH-HHHHhh-CCCcccEE
Q 047386 124 RVLEAL--SASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA-DA-RVYMLT-HPKEFDVV 198 (581)
Q Consensus 124 ~VLDaf--sgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~-DA-~~~l~~-~~~~fDvI 198 (581)
+||-.- ++.|...+.+|+. .|++ |++.|.+++..+.+++ .|.+ . ++.. |. ...+.. ....+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~-~Ga~-vi~~~~~~~~~~~~~~----lGa~---~--v~~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNK-RGYD-VVASTGNREAADYLKQ----LGAS---E--VISREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHH-HTCC-EEEEESSSSTHHHHHH----HTCS---E--EEEHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHH-CCCE-EEEEeCCHHHHHHHHH----cCCc---E--EEECCCchHHHHHHhhcCCccEE
Confidence 454433 5677777888876 4774 9999999887777754 4643 2 2222 11 011111 12468876
Q ss_pred eeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 199 DLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 199 dLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
+|.-|. +.+..+++++++||.+.+.
T Consensus 222 -id~~g~--~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 222 -VDPVGG--KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp -EESCCT--HHHHHHHTTEEEEEEEEEC
T ss_pred -EECCcH--HHHHHHHHhhcCCCEEEEE
Confidence 677775 5788899999999988764
No 437
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=59.89 E-value=23 Score=30.19 Aligned_cols=120 Identities=18% Similarity=0.187 Sum_probs=61.6
Q ss_pred ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccC
Q 047386 146 IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVAD 219 (581)
Q Consensus 146 a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~ 219 (581)
-.+|..+|-++...+.++.-++..+.. .+.....|. ...+.. ..||+|++|-. + ....++.. ++...+
T Consensus 15 ~~~iLivdd~~~~~~~l~~~L~~~~~~---~~v~~~~~~~~a~~~l~~--~~~dlii~d~~l~~~~g~~~~~~-l~~~~~ 88 (152)
T 3eul_A 15 KVRVVVGDDHPLFREGVVRALSLSGSV---NVVGEADDGAAALELIKA--HLPDVALLDYRMPGMDGAQVAAA-VRSYEL 88 (152)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHSSE---EEEEEESSHHHHHHHHHH--HCCSEEEEETTCSSSCHHHHHHH-HHHTTC
T ss_pred eEEEEEEcCCHHHHHHHHHHHhhCCCe---EEEEEeCCHHHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHH-HHhcCC
Confidence 357999999999999999999988732 122233444 444443 36999999962 2 22344443 333323
Q ss_pred C-CeEEEEeccchhhcCCCcchhhhhccCccCCCccchhhhHHHHHHHHHHHHHHcCCceEE
Q 047386 220 G-GMLMCTATDMAVLCGGNGEVCYSKYGSYPLRGKYCHEMALRILLACIESHANRYKRYIEP 280 (581)
Q Consensus 220 g-GlL~vTaTD~a~Lcg~~~~~c~rkYG~~~~k~~~~hE~~lRill~~i~~~Aa~~~r~i~P 280 (581)
. -++.+|+.+..... ..++ +.|..-. ...-+....|+..|.+...+ +..+.|
T Consensus 89 ~~~ii~~s~~~~~~~~----~~~~-~~g~~~~---l~Kp~~~~~l~~~i~~~~~~-~~~~~~ 141 (152)
T 3eul_A 89 PTRVLLISAHDEPAIV----YQAL-QQGAAGF---LLKDSTRTEIVKAVLDCAKG-RDVVAP 141 (152)
T ss_dssp SCEEEEEESCCCHHHH----HHHH-HTTCSEE---EETTCCHHHHHHHHHHHHHC-C-----
T ss_pred CCeEEEEEccCCHHHH----HHHH-HcCCCEE---EecCCCHHHHHHHHHHHHcC-CeeeCH
Confidence 2 35555543222111 1122 3343221 12334556677777665554 444433
No 438
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=59.81 E-value=19 Score=30.24 Aligned_cols=51 Identities=12% Similarity=0.132 Sum_probs=38.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|+. +. ...|+...+... ...||+|++|-
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~~~~dlvi~D~ 58 (136)
T 3kto_A 7 PIIYLVDHQKDARAALSKLLSPLDVT----IQ-CFASAESFMRQQISDDAIGMIIEA 58 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTSSSE----EE-EESSHHHHTTSCCCTTEEEEEEET
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCcE----EE-EeCCHHHHHHHHhccCCCEEEEeC
Confidence 47999999999999999988866652 33 455666665432 35799999996
No 439
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=59.76 E-value=1.2e+02 Score=28.87 Aligned_cols=78 Identities=10% Similarity=0.057 Sum_probs=48.2
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHH-hCCCCCCcEEEEehhHHH------HHhh
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKF-NGSVACSKVESHLADARV------YMLT 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~-N~~~~~~~v~v~~~DA~~------~l~~ 190 (581)
+.++++| ...|+|.+|...++++ .|+ +|++.|.++...+.+.+.+.. .+- .++.++..|... ++..
T Consensus 6 l~~k~~l-VTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~ 80 (265)
T 3lf2_A 6 LSEAVAV-VTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPG---ARLFASVCDVLDALQVRAFAEA 80 (265)
T ss_dssp CTTCEEE-EETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTT---CCEEEEECCTTCHHHHHHHHHH
T ss_pred cCCCEEE-EeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCC---ceEEEEeCCCCCHHHHHHHHHH
Confidence 3455555 4566777776665543 476 599999999988887777765 321 246777766532 2221
Q ss_pred ---CCCcccEEeeCC
Q 047386 191 ---HPKEFDVVDLDP 202 (581)
Q Consensus 191 ---~~~~fDvIdLDP 202 (581)
.-.+.|+++.-.
T Consensus 81 ~~~~~g~id~lvnnA 95 (265)
T 3lf2_A 81 CERTLGCASILVNNA 95 (265)
T ss_dssp HHHHHCSCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 113578887654
No 440
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=59.56 E-value=44 Score=27.38 Aligned_cols=53 Identities=15% Similarity=0.247 Sum_probs=36.5
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhC-----CCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTH-----PKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~-----~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. ..+. ...+ |...+... ...||+|++|-
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~--~~v~-~~~~~~~a~~~l~~~~~~~~~~~~dlvi~d~ 63 (140)
T 1k68_A 3 KKIFLVEDNKADIRLIQEALANSTVP--HEVV-TVRDGMEAMAYLRQEGEYANASRPDLILLXL 63 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHHTCSSC--CEEE-EECSHHHHHHHHTTCGGGGSCCCCSEEEECS
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCCC--ceEE-EECCHHHHHHHHHcccccccCCCCcEEEEec
Confidence 46999999999999999999977752 1232 2333 44444321 15799999996
No 441
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=59.45 E-value=32 Score=28.47 Aligned_cols=73 Identities=19% Similarity=0.154 Sum_probs=44.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCCC--CC-ChHhHHHHHHhcc-C
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDPY--GS-PSVFLDSAIQSVA-D 219 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDPy--Gs-~~~fld~A~~~l~-~ 219 (581)
.+|..+|-++...+.++.-+...|.. +. ...+. ...+.. ..+|+|++|-. +. ...++.. ++... .
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~-l~~~~~~ 75 (136)
T 1mvo_A 4 KKILVVDDEESIVTLLQYNLERSGYD----VI-TASDGEEALKKAET--EKPDLIVLDVMLPKLDGIEVCKQ-LRQQKLM 75 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--HCCSEEEEESSCSSSCHHHHHHH-HHHTTCC
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCcE----EE-EecCHHHHHHHHhh--cCCCEEEEecCCCCCCHHHHHHH-HHcCCCC
Confidence 46999999999999999999877753 32 33333 333432 35899999962 32 2233332 33332 2
Q ss_pred CCeEEEEe
Q 047386 220 GGMLMCTA 227 (581)
Q Consensus 220 gGlL~vTa 227 (581)
-.++.+|+
T Consensus 76 ~~ii~~s~ 83 (136)
T 1mvo_A 76 FPILMLTA 83 (136)
T ss_dssp CCEEEEEC
T ss_pred CCEEEEEC
Confidence 34666665
No 442
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=59.45 E-value=1.2e+02 Score=28.77 Aligned_cols=77 Identities=25% Similarity=0.237 Sum_probs=51.7
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.+.+|| ...|+|.+|...++++ .|+ +|++.|.++...+.+.+.+...+ .++.++..|... ++..
T Consensus 27 l~~k~vl-ITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 27 LSGQVAV-VTGASRGIGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAG----GEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTTCEEE-ESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT----CEEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEE-EECCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhC----CceeEEEecCCCHHHHHHHHHHH
Confidence 4455555 6778888888776654 576 59999999999888888777655 357777777532 2211
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-.+.|+|+.-.
T Consensus 101 ~~~~g~id~lv~~A 114 (262)
T 3rkr_A 101 LAAHGRCDVLVNNA 114 (262)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 113579887653
No 443
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=59.40 E-value=27 Score=32.96 Aligned_cols=77 Identities=25% Similarity=0.251 Sum_probs=47.3
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEeeCC--CC-CChHhHHHHHHhcc-CCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDLDP--YG-SPSVFLDSAIQSVA-DGG 221 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLDP--yG-s~~~fld~A~~~l~-~gG 221 (581)
.+|..+|-++...+.++.-++..|.. +. ...|....+... ...||+|++|- ++ +...++.. ++... .--
T Consensus 24 ~~ILivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~~~~~~~dlvllD~~lp~~~g~~~~~~-lr~~~~~~~ 97 (250)
T 3r0j_A 24 ARVLVVDDEANIVELLSVSLKFQGFE----VY-TATNGAQALDRARETRPDAVILDVXMPGMDGFGVLRR-LRADGIDAP 97 (250)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHH-HHHTTCCCC
T ss_pred ceEEEEECCHHHHHHHHHHHHHCCCE----EE-EECCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHH-HHhcCCCCC
Confidence 47999999999999999999887763 32 334444333211 23699999995 22 22234432 33332 235
Q ss_pred eEEEEecc
Q 047386 222 MLMCTATD 229 (581)
Q Consensus 222 lL~vTaTD 229 (581)
+|.+|+.+
T Consensus 98 ii~lt~~~ 105 (250)
T 3r0j_A 98 ALFLTARD 105 (250)
T ss_dssp EEEEECST
T ss_pred EEEEECCC
Confidence 77777643
No 444
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=59.33 E-value=49 Score=27.39 Aligned_cols=49 Identities=16% Similarity=0.037 Sum_probs=34.8
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
-+|..+|-++...+.++.-++..+.. +. ...+ |...+.. ..||+|++|-
T Consensus 8 ~~ilivdd~~~~~~~l~~~L~~~~~~----v~-~~~~~~~a~~~l~~--~~~dlvi~d~ 59 (137)
T 3hdg_A 8 LKILIVEDDTDAREWLSTIISNHFPE----VW-SAGDGEEGERLFGL--HAPDVIITDI 59 (137)
T ss_dssp CCEEEECSCHHHHHHHHHHHHTTCSC----EE-EESSHHHHHHHHHH--HCCSEEEECS
T ss_pred cEEEEEeCCHHHHHHHHHHHHhcCcE----EE-EECCHHHHHHHHhc--cCCCEEEEeC
Confidence 36999999999999999999875542 32 3333 3444443 3699999996
No 445
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=59.02 E-value=45 Score=27.49 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=35.8
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
-+|..+|-++...+.++.-++..|.. .+. ...+ |...+.. ...+|+|++|-
T Consensus 6 ~~iLivdd~~~~~~~l~~~L~~~g~~---~v~-~~~~~~~a~~~~~~-~~~~dlvi~D~ 59 (129)
T 3h1g_A 6 MKLLVVDDSSTMRRIIKNTLSRLGYE---DVL-EAEHGVEAWEKLDA-NADTKVLITDW 59 (129)
T ss_dssp CCEEEECSCHHHHHHHHHHHHHTTCC---CEE-EESSHHHHHHHHHH-CTTCCEEEECS
T ss_pred cEEEEEeCCHHHHHHHHHHHHHcCCc---EEE-EeCCHHHHHHHHHh-CCCCCEEEEeC
Confidence 35899999999999999999988763 232 2333 3333433 24699999995
No 446
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=58.47 E-value=1.2e+02 Score=28.77 Aligned_cols=79 Identities=25% Similarity=0.264 Sum_probs=47.7
Q ss_pred CCCCCeEEEecCccc-HHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHh
Q 047386 119 QLKPPRVLEALSASG-LRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YML 189 (581)
Q Consensus 119 ~~~~~~VLDafsgSG-~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~ 189 (581)
.+.+.+||= ..||| .+|...++++ .|+ +|++.|.+....+.+.+.++..+- .++.++..|... ++.
T Consensus 19 ~l~~k~vlI-TGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dl~~~~~v~~~~~ 93 (266)
T 3o38_A 19 LLKGKVVLV-TAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGL---GRVEAVVCDVTSTEAVDALIT 93 (266)
T ss_dssp TTTTCEEEE-SSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCS---SCEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCEEEE-ECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCC---CceEEEEeCCCCHHHHHHHHH
Confidence 355666664 44444 3555444332 475 599999999988877777754432 367888877642 222
Q ss_pred h---CCCcccEEeeCC
Q 047386 190 T---HPKEFDVVDLDP 202 (581)
Q Consensus 190 ~---~~~~fDvIdLDP 202 (581)
. .-.+.|+|+.-.
T Consensus 94 ~~~~~~g~id~li~~A 109 (266)
T 3o38_A 94 QTVEKAGRLDVLVNNA 109 (266)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHhCCCcEEEECC
Confidence 1 113579987654
No 447
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=58.42 E-value=40 Score=30.41 Aligned_cols=76 Identities=21% Similarity=0.290 Sum_probs=47.3
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-CCcccEEeeCC--CCC-ChHhHHHHHHhccC-CC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-PKEFDVVDLDP--YGS-PSVFLDSAIQSVAD-GG 221 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~~~fDvIdLDP--yGs-~~~fld~A~~~l~~-gG 221 (581)
.+|..+|-++...+.++.-++..|.. +. ...++...+... ...+|+|++|- ++. ...++.. ++...+ --
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~~~~~~~dlvl~D~~lp~~~g~~~~~~-l~~~~~~~~ 78 (208)
T 1yio_A 5 PTVFVVDDDMSVREGLRNLLRSAGFE----VE-TFDCASTFLEHRRPEQHGCLVLDMRMPGMSGIELQEQ-LTAISDGIP 78 (208)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCE----EE-EESSHHHHHHHCCTTSCEEEEEESCCSSSCHHHHHHH-HHHTTCCCC
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCce----EE-EcCCHHHHHHhhhccCCCEEEEeCCCCCCCHHHHHHH-HHhcCCCCC
Confidence 46999999999999999999876653 33 345555555432 35699999995 232 2233332 333322 34
Q ss_pred eEEEEec
Q 047386 222 MLMCTAT 228 (581)
Q Consensus 222 lL~vTaT 228 (581)
++.+|+.
T Consensus 79 ii~ls~~ 85 (208)
T 1yio_A 79 IVFITAH 85 (208)
T ss_dssp EEEEESC
T ss_pred EEEEeCC
Confidence 6677653
No 448
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=58.18 E-value=58 Score=27.73 Aligned_cols=73 Identities=12% Similarity=0.139 Sum_probs=45.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVADG 220 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~g 220 (581)
.+|..+|-++...+.++.-++..|.. +. ...| |...+.. ..||+|++|-. + ....++.. ++...+.
T Consensus 15 ~~ILivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlvi~D~~l~~~~g~~~~~~-l~~~~~~ 86 (153)
T 3hv2_A 15 PEILLVDSQEVILQRLQQLLSPLPYT----LH-FARDATQALQLLAS--REVDLVISAAHLPQMDGPTLLAR-IHQQYPS 86 (153)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTSSCE----EE-EESSHHHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHH-HHHHCTT
T ss_pred ceEEEECCCHHHHHHHHHHhcccCcE----EE-EECCHHHHHHHHHc--CCCCEEEEeCCCCcCcHHHHHHH-HHhHCCC
Confidence 47999999999999999988877652 32 3333 4444443 46999999962 2 22344543 3333233
Q ss_pred -CeEEEEe
Q 047386 221 -GMLMCTA 227 (581)
Q Consensus 221 -GlL~vTa 227 (581)
-+|.+|+
T Consensus 87 ~~ii~~s~ 94 (153)
T 3hv2_A 87 TTRILLTG 94 (153)
T ss_dssp SEEEEECC
T ss_pred CeEEEEEC
Confidence 3555554
No 449
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=57.88 E-value=58 Score=29.41 Aligned_cols=77 Identities=14% Similarity=0.031 Sum_probs=48.5
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC--CCC-ChHhHHHHHHhccCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP--YGS-PSVFLDSAIQSVADG 220 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP--yGs-~~~fld~A~~~l~~g 220 (581)
.+|..+|-++...+.++.-+...|.. +.....+ |...+.. ..||+|++|- ++. ...++.. ++...+.
T Consensus 14 ~~iLivdd~~~~~~~l~~~L~~~g~~----v~~~~~~~~~al~~~~~--~~~dlvi~D~~~p~~~g~~~~~~-l~~~~~~ 86 (205)
T 1s8n_A 14 RRVLIAEDEALIRMDLAEMLREEGYE----IVGEAGDGQEAVELAEL--HKPDLVIMDVKMPRRDGIDAASE-IASKRIA 86 (205)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCE----EEEEESSHHHHHHHHHH--HCCSEEEEESSCSSSCHHHHHHH-HHHTTCS
T ss_pred ccEEEEECCHHHHHHHHHHHHHCCCE----EEEEeCCHHHHHHHHhh--cCCCEEEEeCCCCCCChHHHHHH-HHhcCCC
Confidence 47999999999999999999877653 3223333 3444433 3589999995 232 2234433 3333344
Q ss_pred CeEEEEeccc
Q 047386 221 GMLMCTATDM 230 (581)
Q Consensus 221 GlL~vTaTD~ 230 (581)
.++.+|+.+.
T Consensus 87 pii~lt~~~~ 96 (205)
T 1s8n_A 87 PIVVLTAFSQ 96 (205)
T ss_dssp CEEEEEEGGG
T ss_pred CEEEEecCCC
Confidence 6788887443
No 450
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=57.87 E-value=69 Score=30.59 Aligned_cols=74 Identities=12% Similarity=0.247 Sum_probs=45.8
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.++++| ...|+|.+|...++++ .|+ +|++.|.++...+.+.+.+ + .++.++..|... ++..
T Consensus 6 l~gk~~l-VTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~----~~~~~~~~Dv~~~~~v~~~~~~~ 76 (255)
T 4eso_A 6 YQGKKAI-VIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF---G----PRVHALRSDIADLNEIAVLGAAA 76 (255)
T ss_dssp TTTCEEE-EETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---G----GGEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEE-EECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---C----CcceEEEccCCCHHHHHHHHHHH
Confidence 4455555 5567777777666543 576 6999999998877666554 2 246677766532 2211
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-.+.|+++.-.
T Consensus 77 ~~~~g~id~lv~nA 90 (255)
T 4eso_A 77 GQTLGAIDLLHINA 90 (255)
T ss_dssp HHHHSSEEEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 113678887653
No 451
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=57.69 E-value=27 Score=28.97 Aligned_cols=75 Identities=23% Similarity=0.243 Sum_probs=45.9
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEeh---hHHHHHhhCCCcccEEeeCCC-------CC-ChHhHHHHHH
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLA---DARVYMLTHPKEFDVVDLDPY-------GS-PSVFLDSAIQ 215 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~---DA~~~l~~~~~~fDvIdLDPy-------Gs-~~~fld~A~~ 215 (581)
.+|..+|-++...+.++.-++..|.. +. ... +|...+.. ..+|+|++|-- +. ...++...-+
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~ 76 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFSK----VI-TLSSPVSLSTVLRE--ENPEVVLLDMNFTSGINNGNEGLFWLHEIKR 76 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSSE----EE-EECCHHHHHHHHHH--SCEEEEEEETTTTC-----CCHHHHHHHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCcE----EE-EeCCHHHHHHHHHc--CCCCEEEEeCCcCCCCCCCccHHHHHHHHHh
Confidence 46999999999999999998876653 33 233 34444543 36999999852 22 2234443223
Q ss_pred hccCCCeEEEEec
Q 047386 216 SVADGGMLMCTAT 228 (581)
Q Consensus 216 ~l~~gGlL~vTaT 228 (581)
....--++.+|..
T Consensus 77 ~~~~~~ii~ls~~ 89 (140)
T 2qr3_A 77 QYRDLPVVLFTAY 89 (140)
T ss_dssp HCTTCCEEEEEEG
T ss_pred hCcCCCEEEEECC
Confidence 2233456777653
No 452
>3k69_A Putative transcription regulator; putative transcriptional regulator, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.95A {Lactobacillus plantarum} SCOP: a.4.5.0
Probab=57.46 E-value=9.3 Score=35.22 Aligned_cols=58 Identities=14% Similarity=0.130 Sum_probs=46.4
Q ss_pred eeeHHHHhhhcCCCCCCHHHHHHHHHHCCceEEecccCCCccccCCCHHH--HHHHHHHHH
Q 047386 413 FLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGV--IWDIMRCWV 471 (581)
Q Consensus 413 yy~l~~l~~~lk~~~P~~~~~~~aL~~~GY~aSrTH~~p~~iKTdAP~~~--i~di~r~w~ 471 (581)
+.+..+||..++++.+-+.+++..|+++||-.|..- ..+|++--.|+++ ++||++.-.
T Consensus 28 ~~s~~~IA~~~~is~~~l~kil~~L~~aGlv~s~rG-~~GGy~Lar~p~~Itl~dIi~ave 87 (162)
T 3k69_A 28 KVASRELAQSLHLNPVMIRNILSVLHKHGYLTGTVG-KNGGYQLDLALADMNLGDLYDLTI 87 (162)
T ss_dssp CBCHHHHHHHHTSCGGGTHHHHHHHHHTTSSEEECS-TTCEEECCSCGGGSBHHHHHHHHS
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeecC-CCCCeEecCChhhCcHHHHHHHHc
Confidence 479999999999999999999999999999544322 3456777666666 788888764
No 453
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=57.09 E-value=24 Score=29.49 Aligned_cols=75 Identities=9% Similarity=-0.066 Sum_probs=47.4
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhC-CCCCCcEEEEehhHHHHHhh-CCCcccEEeeCC--CC-CChHhHHHHHHhcc-CC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNG-SVACSKVESHLADARVYMLT-HPKEFDVVDLDP--YG-SPSVFLDSAIQSVA-DG 220 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~-~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDP--yG-s~~~fld~A~~~l~-~g 220 (581)
.+|..+|-++...+.++.-++..| +. +. ...|....+.. ....||+|++|- ++ ....++.. ++... .-
T Consensus 15 ~~ilivdd~~~~~~~l~~~L~~~g~~~----v~-~~~~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~-l~~~~~~~ 88 (135)
T 3snk_A 15 KQVALFSSDPNFKRDVATRLDALAIYD----VR-VSETDDFLKGPPADTRPGIVILDLGGGDLLGKPGIVE-ARALWATV 88 (135)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTSSEE----EE-EECGGGGGGCCCTTCCCSEEEEEEETTGGGGSTTHHH-HHGGGTTC
T ss_pred cEEEEEcCCHHHHHHHHHHHhhcCCeE----EE-EeccHHHHHHHHhccCCCEEEEeCCCCCchHHHHHHH-HHhhCCCC
Confidence 479999999999999999999877 53 32 34444444432 235799999995 22 22344543 33333 33
Q ss_pred CeEEEEe
Q 047386 221 GMLMCTA 227 (581)
Q Consensus 221 GlL~vTa 227 (581)
.++.+|+
T Consensus 89 ~ii~~s~ 95 (135)
T 3snk_A 89 PLIAVSD 95 (135)
T ss_dssp CEEEEES
T ss_pred cEEEEeC
Confidence 5666665
No 454
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=56.83 E-value=59 Score=25.95 Aligned_cols=73 Identities=16% Similarity=0.193 Sum_probs=45.2
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccCCC
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVADGG 221 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~gG 221 (581)
+|..+|-++...+.++..++..|.. +. ...+. ...+.. ..+|+|++|-. + ....++.. ++....-.
T Consensus 3 ~ilivdd~~~~~~~l~~~l~~~~~~----v~-~~~~~~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~-l~~~~~~~ 74 (120)
T 2a9o_A 3 KILIVDDEKPISDIIKFNMTKEGYE----VV-TAFNGREALEQFEA--EQPDIIILDLMLPEIDGLEVAKT-IRKTSSVP 74 (120)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--HCCSEEEECSSCSSSCHHHHHHH-HHHHCCCC
T ss_pred eEEEEcCCHHHHHHHHHHHHhcCcE----EE-EecCHHHHHHHHHh--CCCCEEEEeccCCCCCHHHHHHH-HHhCCCCC
Confidence 6899999999999999999887753 32 33333 334433 36899999962 2 22234433 33233445
Q ss_pred eEEEEec
Q 047386 222 MLMCTAT 228 (581)
Q Consensus 222 lL~vTaT 228 (581)
++.+|+.
T Consensus 75 ii~~s~~ 81 (120)
T 2a9o_A 75 ILMLSAK 81 (120)
T ss_dssp EEEEESC
T ss_pred EEEEecC
Confidence 6666653
No 455
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=56.71 E-value=16 Score=31.01 Aligned_cols=49 Identities=8% Similarity=0.091 Sum_probs=35.7
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|+. +. ...+ |...+.. ..||+|++|-
T Consensus 9 ~~iLivd~~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlii~d~ 60 (147)
T 2zay_A 9 WRIMLVDTQLPALAASISALSQEGFD----II-QCGNAIEAVPVAVK--THPHLIITEA 60 (147)
T ss_dssp EEEEEECTTGGGGHHHHHHHHHHTEE----EE-EESSHHHHHHHHHH--HCCSEEEEES
T ss_pred ceEEEEeCCHHHHHHHHHHHHHcCCe----EE-EeCCHHHHHHHHHc--CCCCEEEEcC
Confidence 46999999999999999999987763 33 3333 3444443 3699999995
No 456
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=56.56 E-value=5.2 Score=31.61 Aligned_cols=34 Identities=24% Similarity=0.606 Sum_probs=24.6
Q ss_pred EEEEcCCCCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCcccccccccccC
Q 047386 312 YVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNMGGPIWSGR 369 (581)
Q Consensus 312 ~v~~C~~C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~~~~~GPlW~Gp 369 (581)
.+-.|+.||.+.+. ..||.||+....+=|-=--|
T Consensus 4 ~mr~C~~Cg~YTLk------------------------~~CP~CG~~t~~ahParfSP 37 (60)
T 2aus_D 4 RIRKCPKCGRYTLK------------------------ETCPVCGEKTKVAHPPRFSP 37 (60)
T ss_dssp CCEECTTTCCEESS------------------------SBCTTTCSBCEESSCCCCCS
T ss_pred cceECCCCCCEEcc------------------------ccCcCCCCccCCCCCCCCCC
Confidence 34579999866431 35999999988877765555
No 457
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=56.20 E-value=31 Score=29.47 Aligned_cols=73 Identities=19% Similarity=0.319 Sum_probs=43.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVADG 220 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~g 220 (581)
.+|..+|-++...+.++.-++. +. .+. ...+ |...+.. ...||+|++|-. + ....++.. ++...+.
T Consensus 5 ~~ILivdd~~~~~~~l~~~L~~-~~----~v~-~~~~~~~a~~~l~~-~~~~dlvi~D~~l~~~~g~~~~~~-l~~~~~~ 76 (151)
T 3kcn_A 5 ERILLVDDDYSLLNTLKRNLSF-DF----EVT-TCESGPEALACIKK-SDPFSVIMVDMRMPGMEGTEVIQK-ARLISPN 76 (151)
T ss_dssp CEEEEECSCHHHHHHHHHHHTT-TS----EEE-EESSHHHHHHHHHH-SCCCSEEEEESCCSSSCHHHHHHH-HHHHCSS
T ss_pred CeEEEEeCCHHHHHHHHHHhcc-Cc----eEE-EeCCHHHHHHHHHc-CCCCCEEEEeCCCCCCcHHHHHHH-HHhcCCC
Confidence 4799999999999999988863 43 233 3333 4444443 234899999962 2 22344443 3332333
Q ss_pred -CeEEEEe
Q 047386 221 -GMLMCTA 227 (581)
Q Consensus 221 -GlL~vTa 227 (581)
-++.+|+
T Consensus 77 ~~ii~~s~ 84 (151)
T 3kcn_A 77 SVYLMLTG 84 (151)
T ss_dssp CEEEEEEC
T ss_pred cEEEEEEC
Confidence 3555554
No 458
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=55.95 E-value=6.5 Score=37.37 Aligned_cols=28 Identities=29% Similarity=0.782 Sum_probs=18.8
Q ss_pred eEEEEcCCCCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCc
Q 047386 311 SYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKK 358 (581)
Q Consensus 311 g~v~~C~~C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~ 358 (581)
.-+|.|..||..+. |. ..|..||.||.+
T Consensus 153 ~~~~~C~~CG~~~~---g~-----------------~~p~~CP~C~~~ 180 (191)
T 1lko_A 153 ATKWRCRNCGYVHE---GT-----------------GAPELCPACAHP 180 (191)
T ss_dssp EEEEEETTTCCEEE---EE-----------------ECCSBCTTTCCB
T ss_pred CceEEECCCCCEee---CC-----------------CCCCCCCCCcCC
Confidence 34799999996543 22 123489999964
No 459
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=55.73 E-value=35 Score=28.44 Aligned_cols=52 Identities=8% Similarity=0.125 Sum_probs=36.4
Q ss_pred ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC-C-CcccEEeeCC
Q 047386 146 IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH-P-KEFDVVDLDP 202 (581)
Q Consensus 146 a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~-~-~~fDvIdLDP 202 (581)
-.+|..+|-++...+.++.-++..|.. +. ...+....+... . ..||+|++|-
T Consensus 15 ~~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~l~~~~~~dlvilD~ 68 (138)
T 2b4a_A 15 PFRVTLVEDEPSHATLIQYHLNQLGAE----VT-VHPSGSAFFQHRSQLSTCDLLIVSD 68 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHTGGGGGSCSEEEEET
T ss_pred CCeEEEECCCHHHHHHHHHHHHHcCCE----EE-EeCCHHHHHHHHHhCCCCCEEEEeC
Confidence 356999999999999999999987753 32 333443333221 2 4699999996
No 460
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=55.37 E-value=58 Score=27.61 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=35.4
Q ss_pred EEEEEeCCHHHHHHHHHHHHHh-CCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 148 QVVALDNDKASVEACRRNIKFN-GSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N-~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
+|..+|-++...+.++.-++.. +.. .+. ...+ |...+.. ...+|+|++|-
T Consensus 5 ~iLivdd~~~~~~~l~~~L~~~~g~~---~v~-~~~~~~~a~~~l~~-~~~~dlvi~d~ 58 (154)
T 2qsj_A 5 VVLIVDDHHLIRAGAKNLLEGAFSGM---RVE-GAETVSDALAFLEA-DNTVDLILLDV 58 (154)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHCTTE---EEE-EESSHHHHHHHHHT-TCCCSEEEECC
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCce---EEE-EecCHHHHHHHHhc-cCCCCEEEEeC
Confidence 6899999999999999999977 542 222 2333 4444442 15799999996
No 461
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=54.96 E-value=1.2e+02 Score=29.26 Aligned_cols=77 Identities=16% Similarity=0.166 Sum_probs=50.5
Q ss_pred CCCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHh-
Q 047386 119 QLKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YML- 189 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~- 189 (581)
.+.++++| ...|+|.+|...++++ .|+ +|++.|.++...+.+.+.+...+ .++.++..|... ++.
T Consensus 30 ~l~gk~~l-VTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~Dv~~~~~~~~~~~~ 103 (275)
T 4imr_A 30 GLRGRTAL-VTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASG----GTAQELAGDLSEAGAGTDLIER 103 (275)
T ss_dssp CCTTCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTT----CCEEEEECCTTSTTHHHHHHHH
T ss_pred CCCCCEEE-EECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC----CeEEEEEecCCCHHHHHHHHHH
Confidence 34566555 6777788887766544 576 69999999988777777776654 346777776532 221
Q ss_pred --hCCCcccEEeeCC
Q 047386 190 --THPKEFDVVDLDP 202 (581)
Q Consensus 190 --~~~~~fDvIdLDP 202 (581)
.. .+.|+++.--
T Consensus 104 ~~~~-g~iD~lvnnA 117 (275)
T 4imr_A 104 AEAI-APVDILVINA 117 (275)
T ss_dssp HHHH-SCCCEEEECC
T ss_pred HHHh-CCCCEEEECC
Confidence 12 4689987654
No 462
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=54.75 E-value=27 Score=34.86 Aligned_cols=56 Identities=25% Similarity=0.322 Sum_probs=35.6
Q ss_pred CCCCCeEEEecCcccH---HHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH
Q 047386 119 QLKPPRVLEALSASGL---RALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA 184 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~---rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA 184 (581)
.++++.+|=--+++|+ .+.+++.+ |+ +|+++|.+.+.++...+.+ +- ++..+..|+
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~--Ga-~V~i~~r~~~~l~~~~~~~---g~----~~~~~~~Dv 84 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAE--GA-RVFITGRRKDVLDAAIAEI---GG----GAVGIQADS 84 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHT--TC-EEEEEESCHHHHHHHHHHH---CT----TCEEEECCT
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHC--CC-EEEEEECCHHHHHHHHHHc---CC----CeEEEEecC
Confidence 4678777776665553 34445553 77 6999999998877654433 32 345566664
No 463
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=54.56 E-value=34 Score=28.49 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=36.3
Q ss_pred ccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhC---CCcccEEeeCC
Q 047386 146 IGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTH---PKEFDVVDLDP 202 (581)
Q Consensus 146 a~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~---~~~fDvIdLDP 202 (581)
..+|..+|-++...+.++.-++..+.. ..+ ....+ |...+... ...||+|++|-
T Consensus 9 ~~~iLivdd~~~~~~~l~~~l~~~~~~--~~v-~~~~~~~~a~~~l~~~~~~~~~~dlvi~D~ 68 (146)
T 3ilh_A 9 IDSVLLIDDDDIVNFLNTTIIRMTHRV--EEI-QSVTSGNAAINKLNELYAAGRWPSIICIDI 68 (146)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHTTCCE--EEE-EEESSHHHHHHHHHHHHTSSCCCSEEEEES
T ss_pred cceEEEEeCCHHHHHHHHHHHHhcCCC--eee-eecCCHHHHHHHHHHhhccCCCCCEEEEcC
Confidence 357999999999999999998877652 122 22333 34444431 15799999995
No 464
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=54.48 E-value=56 Score=27.34 Aligned_cols=49 Identities=16% Similarity=0.138 Sum_probs=35.8
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH---HHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR---VYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~---~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...|.. ..+.. ..+|+|++|-
T Consensus 5 ~~iLivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~~~~--~~~dlvl~D~ 56 (136)
T 3t6k_A 5 HTLLIVDDDDTVAEMLELVLRGAGYE----VR-RAASGEEALQQIYK--NLPDALICDV 56 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred CEEEEEeCCHHHHHHHHHHHHHCCCE----EE-EeCCHHHHHHHHHh--CCCCEEEEeC
Confidence 46999999999999999999887763 32 333443 34433 4699999995
No 465
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=54.44 E-value=34 Score=27.88 Aligned_cols=49 Identities=16% Similarity=0.101 Sum_probs=34.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...+ |...+.. ..+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~~----v~-~~~~~~~a~~~~~~--~~~dlvl~D~ 55 (124)
T 1srr_A 4 EKILIVDDQSGIRILLNEVFNKEGYQ----TF-QAANGLQALDIVTK--ERPDLVLLDM 55 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCE----EE-EESSHHHHHHHHHH--HCCSEEEEES
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcE----EE-EeCCHHHHHHHHhc--cCCCEEEEec
Confidence 36899999999999999999866652 32 3333 3444433 3689999995
No 466
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=54.33 E-value=1.5e+02 Score=28.23 Aligned_cols=78 Identities=21% Similarity=0.174 Sum_probs=50.0
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.++++| ...|+|..|...++++ .|+ +|++.|.++...+.+.+.++..+- .++.++..|... ++..
T Consensus 8 l~~k~vl-VTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~ 82 (262)
T 3pk0_A 8 LQGRSVV-VTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGS---GKVIGVQTDVSDRAQCDALAGRA 82 (262)
T ss_dssp CTTCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSS---SCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEE-EECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCC---CcEEEEEcCCCCHHHHHHHHHHH
Confidence 4455555 6677788787766543 476 699999999988877777765442 357777777532 2211
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-.+.|+++.-.
T Consensus 83 ~~~~g~id~lvnnA 96 (262)
T 3pk0_A 83 VEEFGGIDVVCANA 96 (262)
T ss_dssp HHHHSCCSEEEECC
T ss_pred HHHhCCCCEEEECC
Confidence 113578887543
No 467
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=54.24 E-value=50 Score=27.52 Aligned_cols=76 Identities=13% Similarity=0.218 Sum_probs=45.2
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhh---CCCcccEEeeCC--CCC-ChHhHHHHHHh-c
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLT---HPKEFDVVDLDP--YGS-PSVFLDSAIQS-V 217 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~---~~~~fDvIdLDP--yGs-~~~fld~A~~~-l 217 (581)
+|..+|-++...+.++.-++..|.. .+. ...| |...+.. ....||+|++|- ++. ...++.. ++. .
T Consensus 4 ~ILivdD~~~~~~~l~~~L~~~g~~---~v~-~~~~~~~al~~~~~~~~~~~~~dlvllD~~mp~~~G~~~~~~-lr~~~ 78 (133)
T 2r25_B 4 KILVVEDNHVNQEVIKRMLNLEGIE---NIE-LACDGQEAFDKVKELTSKGENYNMIFMDVQMPKVDGLLSTKM-IRRDL 78 (133)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC---CEE-EESSHHHHHHHHHHHHHHTCCCSEEEECSCCSSSCHHHHHHH-HHHHS
T ss_pred eEEEEcCCHHHHHHHHHHHHHcCCc---eEE-EECCHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCChHHHHHH-HHhhc
Confidence 4899999999999999999876653 232 2333 4444443 114699999995 232 2233332 332 1
Q ss_pred c-CCCeEEEEec
Q 047386 218 A-DGGMLMCTAT 228 (581)
Q Consensus 218 ~-~gGlL~vTaT 228 (581)
. .--++.+|+.
T Consensus 79 ~~~~~ii~lt~~ 90 (133)
T 2r25_B 79 GYTSPIVALTAF 90 (133)
T ss_dssp CCCSCEEEEESC
T ss_pred CCCCCEEEEECC
Confidence 1 2246777764
No 468
>3t8r_A Staphylococcus aureus CYMR; transcriptional regulator protein, dimer, sulfenic acid, UNK function; 1.70A {Staphylococcus aureus} PDB: 3t8t_A
Probab=54.12 E-value=11 Score=33.80 Aligned_cols=58 Identities=19% Similarity=0.119 Sum_probs=46.7
Q ss_pred eeeHHHHhhhcCCCCCCHHHHHHHHHHCCceEEecccCCCccccCCCHHH--HHHHHHHHH
Q 047386 413 FLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGV--IWDIMRCWV 471 (581)
Q Consensus 413 yy~l~~l~~~lk~~~P~~~~~~~aL~~~GY~aSrTH~~p~~iKTdAP~~~--i~di~r~w~ 471 (581)
..+..+||..++++.+-+.+++..|+++|+=.|. .=..+|+.-.-|+++ +.||++.-.
T Consensus 28 ~~s~~~IA~~~~i~~~~l~kil~~L~~aGlv~s~-rG~~GGy~Lar~p~~Itl~dV~~ave 87 (143)
T 3t8r_A 28 CISLKSIAEENNLSDLYLEQLVGPLRNAGLIRSV-RGAKGGYQLRVPAEEISAGDIIRLLE 87 (143)
T ss_dssp CEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEC-SSSSSEEEESSCGGGCBHHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCEEEec-CCCCCCeeecCCcccCCHHHHHHHhC
Confidence 4799999999999999999999999999995443 333467877777775 778888764
No 469
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=53.84 E-value=1.3e+02 Score=28.49 Aligned_cols=77 Identities=17% Similarity=0.115 Sum_probs=49.8
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.++++| .-.|+|.+|...++++ .|+ +|++.|.+....+.+.+.+...+. ++.++..|... ++..
T Consensus 10 l~~k~vl-VTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~----~~~~~~~Dv~d~~~v~~~~~~~ 83 (256)
T 3gaf_A 10 LNDAVAI-VTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGG----KAIGLECNVTDEQHREAVIKAA 83 (256)
T ss_dssp CTTCEEE-ECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTC----CEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEE-EECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCC----cEEEEECCCCCHHHHHHHHHHH
Confidence 4455555 5677777777666543 365 599999999988888877776553 46777766532 2221
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-.+.|+++.-.
T Consensus 84 ~~~~g~id~lv~nA 97 (256)
T 3gaf_A 84 LDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 113578887653
No 470
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=53.83 E-value=61 Score=28.04 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=53.0
Q ss_pred cCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH--HHHhhC-CCcccEEeeCCC
Q 047386 129 LSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR--VYMLTH-PKEFDVVDLDPY 203 (581)
Q Consensus 129 fsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~--~~l~~~-~~~fDvIdLDPy 203 (581)
..|.|-+|...+..+ .|. .|+++|.|++.++.+++ .++ .++.+|+. ..|... -..+|+|++--.
T Consensus 12 IiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~----~g~------~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 12 LVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRE----RGV------RAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp EECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHH----TTC------EEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred EECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHH----cCC------CEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 346677777766554 354 69999999999887653 343 56778764 234332 246898876532
Q ss_pred CCC-hHhHHHHHHhccCCCeEEEEeccc
Q 047386 204 GSP-SVFLDSAIQSVADGGMLMCTATDM 230 (581)
Q Consensus 204 Gs~-~~fld~A~~~l~~gGlL~vTaTD~ 230 (581)
... ..++-..++.+.++..+++.+.|.
T Consensus 81 ~~~~n~~~~~~a~~~~~~~~iiar~~~~ 108 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPDIEIIARAHYD 108 (140)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEEESSH
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEEECCH
Confidence 211 122323345555666666655433
No 471
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=53.79 E-value=34 Score=28.77 Aligned_cols=74 Identities=12% Similarity=0.210 Sum_probs=45.0
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCC--CCC-ChHhHHHHHHhccCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDP--YGS-PSVFLDSAIQSVADG 220 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDP--yGs-~~~fld~A~~~l~~g 220 (581)
.+|..+|-++...+.++..++..|.. +. ...|. ..++.. ..+|+|++|- ++. ...++.. ++....-
T Consensus 5 ~~Ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~~~~--~~~dlvllD~~l~~~~g~~l~~~-l~~~~~~ 76 (136)
T 2qzj_A 5 TKILIIDGDKDNCQKLKGFLEEKGIS----ID-LAYNCEEAIGKIFS--NKYDLIFLEIILSDGDGWTLCKK-IRNVTTC 76 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCE----EE-EESSHHHHHHHHHH--CCCSEEEEESEETTEEHHHHHHH-HHTTCCC
T ss_pred CeEEEEcCCHHHHHHHHHHHHHCCCE----EE-EECCHHHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHH-HccCCCC
Confidence 46999999999999999999866652 33 33443 334433 4689999996 232 1233332 3322233
Q ss_pred CeEEEEec
Q 047386 221 GMLMCTAT 228 (581)
Q Consensus 221 GlL~vTaT 228 (581)
.++.+|+.
T Consensus 77 ~ii~ls~~ 84 (136)
T 2qzj_A 77 PIVYMTYI 84 (136)
T ss_dssp CEEEEESC
T ss_pred CEEEEEcC
Confidence 56767653
No 472
>1ylf_A RRF2 family protein; structural genomics, transcription regulator, P protein structure initiative; 2.50A {Bacillus cereus atcc 14579} SCOP: a.4.5.55
Probab=53.44 E-value=9.3 Score=34.40 Aligned_cols=56 Identities=11% Similarity=0.105 Sum_probs=46.0
Q ss_pred eeeHHHHhhhcCCCCCCHHHHHHHHHHCCceEEecccCCCccccCCCHHH--HHHHHHHH
Q 047386 413 FLSLHNLCSTLKCTSPSAVMFRSAVINAGYRVSGTHVNPLGLKTDAPMGV--IWDIMRCW 470 (581)
Q Consensus 413 yy~l~~l~~~lk~~~P~~~~~~~aL~~~GY~aSrTH~~p~~iKTdAP~~~--i~di~r~w 470 (581)
..+..+||..++++.+-+.+++..|.++||=.|.-- .+|+.-.-|++. +.||++.-
T Consensus 30 ~~~~~~iA~~~~i~~~~l~kil~~L~~~Glv~s~rG--~GGy~L~~~p~~Itl~dVi~a~ 87 (149)
T 1ylf_A 30 LCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRG--PGGAGLLKDLHEITLLDVYHAV 87 (149)
T ss_dssp GCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC-----CCEEESSCGGGCBHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEEccC--CCceEeCCChhhCcHHHHHHHH
Confidence 478999999999999999999999999999666544 678888888776 68888865
No 473
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=53.24 E-value=6.7 Score=31.79 Aligned_cols=12 Identities=33% Similarity=0.794 Sum_probs=10.0
Q ss_pred ceEEEEcCCCCc
Q 047386 310 LSYVYQCIGCDS 321 (581)
Q Consensus 310 ~g~v~~C~~C~~ 321 (581)
..+.|.|..||.
T Consensus 25 ~~v~Y~C~~CG~ 36 (70)
T 1twf_L 25 ATLKYICAECSS 36 (70)
T ss_dssp CCCCEECSSSCC
T ss_pred ceEEEECCCCCC
Confidence 568899999985
No 474
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=52.63 E-value=1.4e+02 Score=29.15 Aligned_cols=77 Identities=16% Similarity=0.182 Sum_probs=46.5
Q ss_pred CCCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCcEEEEehhH
Q 047386 119 QLKPPRVLEALSASGLRALRYAREV--EGIGQVVALDND------------KASVEACRRNIKFNGSVACSKVESHLADA 184 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s------------~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA 184 (581)
.+.++++| ...|+|.+|...++++ .|+ .|+++|.+ ++.++...+.++..+ .++.++..|+
T Consensus 25 ~l~gk~~l-VTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Dv 98 (299)
T 3t7c_A 25 KVEGKVAF-ITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALG----RRIIASQVDV 98 (299)
T ss_dssp TTTTCEEE-EESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTT----CCEEEEECCT
T ss_pred ccCCCEEE-EECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcC----CceEEEECCC
Confidence 45566666 4566677776665543 465 58999987 666666666666554 3567777775
Q ss_pred HH------HHhh---CCCcccEEeeC
Q 047386 185 RV------YMLT---HPKEFDVVDLD 201 (581)
Q Consensus 185 ~~------~l~~---~~~~fDvIdLD 201 (581)
.. ++.. .-.+.|+++.-
T Consensus 99 ~~~~~v~~~~~~~~~~~g~iD~lv~n 124 (299)
T 3t7c_A 99 RDFDAMQAAVDDGVTQLGRLDIVLAN 124 (299)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEEC
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 32 2221 11357888754
No 475
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=52.60 E-value=12 Score=37.92 Aligned_cols=96 Identities=13% Similarity=0.151 Sum_probs=51.5
Q ss_pred CeEEEe--cCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEe----hhHHHHHhh----CC
Q 047386 123 PRVLEA--LSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHL----ADARVYMLT----HP 192 (581)
Q Consensus 123 ~~VLDa--fsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~----~DA~~~l~~----~~ 192 (581)
.+||=. -++.|..++.+|+. .|++ |++...++...+-.++-++..|.+ .+--.. .|....+.. ..
T Consensus 169 ~~VlV~Ga~G~vG~~aiqlak~-~Ga~-vi~~~~~~~~~~~~~~~~~~lGa~---~vi~~~~~~~~~~~~~i~~~t~~~~ 243 (364)
T 1gu7_A 169 DWFIQNGGTSAVGKYASQIGKL-LNFN-SISVIRDRPNLDEVVASLKELGAT---QVITEDQNNSREFGPTIKEWIKQSG 243 (364)
T ss_dssp CEEEESCTTSHHHHHHHHHHHH-HTCE-EEEEECCCTTHHHHHHHHHHHTCS---EEEEHHHHHCGGGHHHHHHHHHHHT
T ss_pred cEEEECCCCcHHHHHHHHHHHH-CCCE-EEEEecCccccHHHHHHHHhcCCe---EEEecCccchHHHHHHHHHHhhccC
Confidence 566643 25667777788886 4774 666654443211111222345653 221111 232222221 13
Q ss_pred CcccEEeeCCCCCChHhHHHHHHhccCCCeEEEE
Q 047386 193 KEFDVVDLDPYGSPSVFLDSAIQSVADGGMLMCT 226 (581)
Q Consensus 193 ~~fDvIdLDPyGs~~~fld~A~~~l~~gGlL~vT 226 (581)
..||+| +|.-|. +....++++|+++|.+++.
T Consensus 244 ~g~Dvv-id~~G~--~~~~~~~~~l~~~G~~v~~ 274 (364)
T 1gu7_A 244 GEAKLA-LNCVGG--KSSTGIARKLNNNGLMLTY 274 (364)
T ss_dssp CCEEEE-EESSCH--HHHHHHHHTSCTTCEEEEC
T ss_pred CCceEE-EECCCc--hhHHHHHHHhccCCEEEEe
Confidence 468987 466664 3333779999999988764
No 476
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=52.50 E-value=1.8e+02 Score=28.47 Aligned_cols=80 Identities=19% Similarity=0.180 Sum_probs=49.8
Q ss_pred CCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh-
Q 047386 120 LKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT- 190 (581)
Q Consensus 120 ~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~- 190 (581)
+.+.++| +..|+|.+|...++++ .|+ +|++.|.++...+.+.+.+...+.. ..++.++..|... ++..
T Consensus 24 l~~k~vl-VTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~ 100 (297)
T 1xhl_A 24 FSGKSVI-ITGSSNGIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVP-AEKINAVVADVTEASGQDDIINTT 100 (297)
T ss_dssp CTTCEEE-ETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCC-GGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCC-CceEEEEecCCCCHHHHHHHHHHH
Confidence 3455554 6778888888776654 465 5999999998887777666554321 0156777776532 2221
Q ss_pred --CCCcccEEeeCC
Q 047386 191 --HPKEFDVVDLDP 202 (581)
Q Consensus 191 --~~~~fDvIdLDP 202 (581)
.-...|+|+.-.
T Consensus 101 ~~~~g~iD~lvnnA 114 (297)
T 1xhl_A 101 LAKFGKIDILVNNA 114 (297)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHhcCCCCEEEECC
Confidence 113579887643
No 477
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=52.46 E-value=1.3e+02 Score=29.45 Aligned_cols=79 Identities=16% Similarity=0.078 Sum_probs=49.9
Q ss_pred CCCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHH------HHhh
Q 047386 119 QLKPPRVLEALSASGLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARV------YMLT 190 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~------~l~~ 190 (581)
.+.+++|| +..|+|.+|...++++ .|+ +|++.|.++...+.+.+.+...+. .++.++..|... ++..
T Consensus 38 ~l~~k~vl-VTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~---~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 38 DLSARSVL-VTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGA---GNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp CCTTCEEE-ETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSS---SCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEE-EeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCC---CcEEEEEEeCCCHHHHHHHHHH
Confidence 35565555 6677788887766543 576 699999999887776666654331 357777777642 2211
Q ss_pred ---CCCcccEEeeCC
Q 047386 191 ---HPKEFDVVDLDP 202 (581)
Q Consensus 191 ---~~~~fDvIdLDP 202 (581)
.-.+.|+++.-.
T Consensus 113 ~~~~~g~iD~lvnnA 127 (293)
T 3rih_A 113 VVDAFGALDVVCANA 127 (293)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 113579887653
No 478
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=51.93 E-value=79 Score=25.62 Aligned_cols=51 Identities=18% Similarity=0.096 Sum_probs=34.9
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhh-CCCcccEEeeCC
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLT-HPKEFDVVDLDP 202 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~-~~~~fDvIdLDP 202 (581)
+|..+|-++...+.++..++..+.. .+. ...++...+.. ....+|+|++|-
T Consensus 6 ~ilivdd~~~~~~~l~~~l~~~~~~---~v~-~~~~~~~a~~~~~~~~~dlvi~D~ 57 (128)
T 1jbe_A 6 KFLVVDDFSTMRRIVRNLLKELGFN---NVE-EAEDGVDALNKLQAGGYGFVISDW 57 (128)
T ss_dssp CEEEECSCHHHHHHHHHHHHHTTCC---CEE-EESSHHHHHHHHTTCCCCEEEEES
T ss_pred EEEEECCCHHHHHHHHHHHHHcCCc---EEE-eeCCHHHHHHHHHhcCCCEEEEeC
Confidence 5899999999999999999877752 232 23333333321 234699999996
No 479
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=51.46 E-value=53 Score=27.22 Aligned_cols=51 Identities=18% Similarity=0.195 Sum_probs=34.5
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|+.+|-++...+.++..++..+-- .+.....| +..++.. ..+|+|++|-
T Consensus 4 ~~Ilivdd~~~~~~~l~~~l~~~~~~---~~v~~~~~~~~al~~~~~--~~~dlvilD~ 57 (133)
T 3b2n_A 4 TSLIIAEDQNMLRQAMVQLIKLHGDF---EILADTDNGLDAMKLIEE--YNPNVVILDI 57 (133)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHSSE---EEEEEESCHHHHHHHHHH--HCCSEEEECS
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCc---EEEEEcCCHHHHHHHHhh--cCCCEEEEec
Confidence 36899999999999999999877511 11122333 3344433 3589999996
No 480
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=51.39 E-value=17 Score=33.10 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=43.4
Q ss_pred HHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCCCCCChHhHH
Q 047386 135 RALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDPYGSPSVFLD 211 (581)
Q Consensus 135 rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDPyGs~~~fld 211 (581)
++..++. .| .+|..+|.|+..--..- .+.. ...+.++..+ ...++......||+|++|-++.......
T Consensus 22 la~~la~--~g-~~vlliD~D~~~~~~~~-----~~~~-~~~~~~~~~~~~~l~~~l~~l~~~yD~viiD~~~~~~~~~~ 92 (206)
T 4dzz_A 22 IATALSR--SG-YNIAVVDTDPQMSLTNW-----SKAG-KAAFDVFTAASEKDVYGIRKDLADYDFAIVDGAGSLSVITS 92 (206)
T ss_dssp HHHHHHH--TT-CCEEEEECCTTCHHHHH-----HTTS-CCSSEEEECCSHHHHHTHHHHTTTSSEEEEECCSSSSHHHH
T ss_pred HHHHHHH--CC-CeEEEEECCCCCCHHHH-----HhcC-CCCCcEEecCcHHHHHHHHHhcCCCCEEEEECCCCCCHHHH
Confidence 4444554 35 46999999976432211 1111 1223444432 2333433346799999996544455555
Q ss_pred HHHHhccCCCeEEEEe
Q 047386 212 SAIQSVADGGMLMCTA 227 (581)
Q Consensus 212 ~A~~~l~~gGlL~vTa 227 (581)
.++.. -+.+|.++.
T Consensus 93 ~~l~~--ad~viiv~~ 106 (206)
T 4dzz_A 93 AAVMV--SDLVIIPVT 106 (206)
T ss_dssp HHHHH--CSEEEEEEC
T ss_pred HHHHH--CCEEEEEec
Confidence 55554 344666654
No 481
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=51.06 E-value=1e+02 Score=25.35 Aligned_cols=51 Identities=18% Similarity=0.178 Sum_probs=35.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...+....+.......|+|++|-
T Consensus 8 ~~ILivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~~~~~~dlvllD~ 58 (136)
T 1dcf_A 8 LKVLVMDENGVSRMVTKGLLVHLGCE----VT-TVSSNEECLRVVSHEHKVVFMDV 58 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHCCTTCSEEEEEC
T ss_pred CeEEEEeCCHHHHHHHHHHHHHcCCe----EE-EeCCHHHHHHHHhccCCEEEEeC
Confidence 46999999999999999999877653 32 34444444433222239999995
No 482
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=51.00 E-value=1.2e+02 Score=28.68 Aligned_cols=76 Identities=14% Similarity=0.022 Sum_probs=43.7
Q ss_pred CCCCCeEEEecCcc--cHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH------HHH
Q 047386 119 QLKPPRVLEALSAS--GLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR------VYM 188 (581)
Q Consensus 119 ~~~~~~VLDafsgS--G~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~------~~l 188 (581)
.+.+++||=. .|+ |.+|...++++ .|+ +|++.|.+....+.+++-.+..+ .+.++..|.. .++
T Consensus 11 ~~~~k~vlIT-Ga~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~Dv~~~~~v~~~~ 83 (271)
T 3ek2_A 11 FLDGKRILLT-GLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-----SELVFPCDVADDAQIDALF 83 (271)
T ss_dssp TTTTCEEEEC-CCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-----CCCEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEe-CCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC-----CcEEEECCCCCHHHHHHHH
Confidence 3456677754 444 66776665443 476 69999998766666665555443 2345665543 222
Q ss_pred hh---CCCcccEEeeC
Q 047386 189 LT---HPKEFDVVDLD 201 (581)
Q Consensus 189 ~~---~~~~fDvIdLD 201 (581)
.. .-.+.|+++.-
T Consensus 84 ~~~~~~~g~id~lv~n 99 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHS 99 (271)
T ss_dssp HHHHHHCSCEEEEEEC
T ss_pred HHHHHHcCCCCEEEEC
Confidence 21 12367888754
No 483
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=50.59 E-value=1.8e+02 Score=28.65 Aligned_cols=78 Identities=17% Similarity=0.189 Sum_probs=47.2
Q ss_pred CCCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeCC------------HHHHHHHHHHHHHhCCCCCCcEEEEehhH
Q 047386 119 QLKPPRVLEALSASGLRALRYAREV--EGIGQVVALDND------------KASVEACRRNIKFNGSVACSKVESHLADA 184 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~s------------~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA 184 (581)
.+.+++|| +-.|+|.+|...++++ .|+ +|+++|.+ ...++.+.+.+...+. ++.++..|.
T Consensus 43 ~l~gk~~l-VTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~Dv 116 (317)
T 3oec_A 43 RLQGKVAF-ITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR----RIIARQADV 116 (317)
T ss_dssp TTTTCEEE-ESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC----CEEEEECCT
T ss_pred ccCCCEEE-EeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCC----eEEEEECCC
Confidence 34565555 6677777777766544 465 68899886 6666666666655542 467777765
Q ss_pred H------HHHhh---CCCcccEEeeCC
Q 047386 185 R------VYMLT---HPKEFDVVDLDP 202 (581)
Q Consensus 185 ~------~~l~~---~~~~fDvIdLDP 202 (581)
. .++.. .-.+.|+++.--
T Consensus 117 ~d~~~v~~~~~~~~~~~g~iD~lVnnA 143 (317)
T 3oec_A 117 RDLASLQAVVDEALAEFGHIDILVSNV 143 (317)
T ss_dssp TCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 3 22221 113679887653
No 484
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=50.30 E-value=75 Score=25.56 Aligned_cols=49 Identities=10% Similarity=0.174 Sum_probs=34.9
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++..++..|.. +. ...+ +..++.. ..+|+|++|-
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~~----v~-~~~~~~~a~~~~~~--~~~dlvi~D~ 55 (123)
T 1xhf_A 4 PHILIVEDELVTRNTLKSIFEAEGYD----VF-EATDGAEMHQILSE--YDINLVIMDI 55 (123)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCE----EE-EESSHHHHHHHHHH--SCCSEEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHHhhCCcE----EE-EeCCHHHHHHHHhc--CCCCEEEEcC
Confidence 36899999999999999999866652 32 2333 3444443 4689999996
No 485
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=49.39 E-value=64 Score=26.92 Aligned_cols=49 Identities=14% Similarity=0.047 Sum_probs=35.6
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...+ |..++.. ..||+|++|-
T Consensus 4 ~~ILivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~l~~--~~~dlvi~D~ 55 (138)
T 3c3m_A 4 YTILVVDDSPMIVDVFVTMLERGGYR----PI-TAFSGEECLEALNA--TPPDLVLLDI 55 (138)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred ceEEEEeCCHHHHHHHHHHHHHcCce----EE-EeCCHHHHHHHHhc--cCCCEEEEeC
Confidence 36999999999999999999877753 32 3333 3444443 3689999996
No 486
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=49.10 E-value=6.4 Score=39.05 Aligned_cols=34 Identities=18% Similarity=0.158 Sum_probs=28.2
Q ss_pred CeEEEecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHH
Q 047386 123 PRVLEALSASGLRALRYAREVEGIGQVVALDNDKASVEAC 162 (581)
Q Consensus 123 ~~VLDafsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i 162 (581)
.+.+|+|+|+|+.++... + . ++.||+|+..+.+-
T Consensus 26 ~~yvEpF~GggaV~~~~~---~--~-~viNDin~~li~~~ 59 (259)
T 1yf3_A 26 NRFVDLFCGGLSVSLNVN---G--P-VLANDIQEPIIEMY 59 (259)
T ss_dssp SEEEETTCTTCTTGGGSC---S--S-EEEECSCHHHHHHH
T ss_pred CeEEEecCCccHHHHhcc---c--c-EEEecCChHHHHHH
Confidence 489999999999988642 2 5 99999999998754
No 487
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=48.68 E-value=12 Score=35.01 Aligned_cols=13 Identities=31% Similarity=0.473 Sum_probs=9.8
Q ss_pred eEEEEcCCCCcee
Q 047386 311 SYVYQCIGCDSFH 323 (581)
Q Consensus 311 g~v~~C~~C~~~~ 323 (581)
.-.|.|+.||..+
T Consensus 136 ~~~~~C~~CG~i~ 148 (170)
T 3pwf_A 136 KKVYICPICGYTA 148 (170)
T ss_dssp SCEEECTTTCCEE
T ss_pred CCeeEeCCCCCee
Confidence 3578899999643
No 488
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=48.65 E-value=89 Score=25.43 Aligned_cols=49 Identities=24% Similarity=0.276 Sum_probs=36.1
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +. ...+. ...+.. ..+|+|++|-
T Consensus 7 ~~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlii~d~ 58 (132)
T 3lte_A 7 KRILVVDDDQAMAAAIERVLKRDHWQ----VE-IAHNGFDAGIKLST--FEPAIMTLDL 58 (132)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--TCCSEEEEES
T ss_pred ccEEEEECCHHHHHHHHHHHHHCCcE----EE-EeCCHHHHHHHHHh--cCCCEEEEec
Confidence 57999999999999999999887763 32 33333 344433 4699999996
No 489
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=48.48 E-value=64 Score=25.27 Aligned_cols=49 Identities=16% Similarity=0.092 Sum_probs=35.2
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
.+|..+|-++...+.++.-++..|.. +.. ..+ +...+.. ..||+|++|-
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~g~~----v~~-~~~~~~~~~~l~~--~~~dlii~d~ 53 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAAGFK----VIW-LVDGSTALDQLDL--LQPIVILMAW 53 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCE----EEE-ESCHHHHHHHHHH--HCCSEEEEEC
T ss_pred CEEEEEeCCHHHHHHHHHHHHhCCcE----EEE-ecCHHHHHHHHHh--cCCCEEEEec
Confidence 36899999999999999999987763 332 333 3444443 3689999985
No 490
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=48.38 E-value=24 Score=27.44 Aligned_cols=42 Identities=7% Similarity=0.078 Sum_probs=33.7
Q ss_pred HHHHHHHhhCCCCCceeeHHHHhhhcCCCCCCHHHHHHHHHHCCce
Q 047386 398 AVLTTISEELPDVPLFLSLHNLCSTLKCTSPSAVMFRSAVINAGYR 443 (581)
Q Consensus 398 ~lL~~~~eEl~~~P~yy~l~~l~~~lk~~~P~~~~~~~aL~~~GY~ 443 (581)
.+|..+.+. .. +.+..+||..++++-.....++..|++.||-
T Consensus 14 ~IL~~L~~~--~~--~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I 55 (67)
T 2heo_A 14 KILQVLSDD--GG--PVAIFQLVKKCQVPKKTLNQVLYRLKKEDRV 55 (67)
T ss_dssp HHHHHHHHH--CS--CEEHHHHHHHHCSCHHHHHHHHHHHHHTTSE
T ss_pred HHHHHHHHc--CC--CcCHHHHHHHHCcCHHHHHHHHHHHHHCCcE
Confidence 455555442 12 3799999999999999999999999999993
No 491
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=48.12 E-value=1e+02 Score=25.19 Aligned_cols=74 Identities=18% Similarity=0.164 Sum_probs=45.5
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcE-EEE-ehhHHHHHhhCCCcccEEeeCCC--C-CChHhHHHHHHhccCC-C
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKV-ESH-LADARVYMLTHPKEFDVVDLDPY--G-SPSVFLDSAIQSVADG-G 221 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v-~v~-~~DA~~~l~~~~~~fDvIdLDPy--G-s~~~fld~A~~~l~~g-G 221 (581)
+|..+|-++...+.++.-++..|.. .+ .+. ..+|...+.. ..||+|++|-- + ....++.. ++...++ -
T Consensus 3 ~ilivdd~~~~~~~l~~~L~~~g~~---v~~~~~~~~~a~~~~~~--~~~dlii~d~~l~~~~g~~~~~~-l~~~~~~~~ 76 (134)
T 3f6c_A 3 NAIIIDDHPLAIAAIRNLLIKNDIE---ILAELTEGGSAVQRVET--LKPDIVIIDVDIPGVNGIQVLET-LRKRQYSGI 76 (134)
T ss_dssp EEEEECCCHHHHHHHHHHHHHTTEE---EEEEESSSTTHHHHHHH--HCCSEEEEETTCSSSCHHHHHHH-HHHTTCCSE
T ss_pred EEEEEcCCHHHHHHHHHHHhhCCcE---EEEEcCCHHHHHHHHHh--cCCCEEEEecCCCCCChHHHHHH-HHhcCCCCe
Confidence 5899999999999999999987753 11 121 2345566654 36999999962 2 22344443 3333333 3
Q ss_pred eEEEEe
Q 047386 222 MLMCTA 227 (581)
Q Consensus 222 lL~vTa 227 (581)
++.+|+
T Consensus 77 ii~~s~ 82 (134)
T 3f6c_A 77 IIIVSA 82 (134)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 555554
No 492
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=47.98 E-value=59 Score=29.62 Aligned_cols=74 Identities=23% Similarity=0.236 Sum_probs=45.5
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhH---HHHHhhCCCcccEEeeCC--CCC-ChHhHHHHHHhcc-CC
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLADA---RVYMLTHPKEFDVVDLDP--YGS-PSVFLDSAIQSVA-DG 220 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA---~~~l~~~~~~fDvIdLDP--yGs-~~~fld~A~~~l~-~g 220 (581)
+|..+|-++...+.++.-++..|.. +. ...|. ...+.. ..+|+|++|- ++. ...++.. ++... .-
T Consensus 4 ~ilivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~~~~--~~~dlvllD~~l~~~~g~~~~~~-lr~~~~~~ 75 (225)
T 1kgs_A 4 RVLVVEDERDLADLITEALKKEMFT----VD-VCYDGEEGMYMALN--EPFDVVILDIMLPVHDGWEILKS-MRESGVNT 75 (225)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCE----EE-EESSHHHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHH-HHHTTCCC
T ss_pred eEEEEeCCHHHHHHHHHHHHHCCCE----EE-EECCHHHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHH-HHhcCCCC
Confidence 5899999999999999999887653 32 33343 334433 4699999996 232 2233332 33222 33
Q ss_pred CeEEEEecc
Q 047386 221 GMLMCTATD 229 (581)
Q Consensus 221 GlL~vTaTD 229 (581)
-++.+|+.+
T Consensus 76 ~ii~ls~~~ 84 (225)
T 1kgs_A 76 PVLMLTALS 84 (225)
T ss_dssp CEEEEESSC
T ss_pred CEEEEeCCC
Confidence 567777543
No 493
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=47.70 E-value=9.3 Score=39.38 Aligned_cols=88 Identities=13% Similarity=0.145 Sum_probs=52.0
Q ss_pred CCCeEEE---ecCcccHHHHHHhhhcCCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHHHHHhhC--CCcc
Q 047386 121 KPPRVLE---ALSASGLRALRYAREVEGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADARVYMLTH--PKEF 195 (581)
Q Consensus 121 ~~~~VLD---afsgSG~rgIr~a~E~~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~~~l~~~--~~~f 195 (581)
.+.+||= +-++.|..++.+|+. .|+ +|++.|.+++-.+.+++ .|.+ .-+.....|....+... ...+
T Consensus 170 ~g~~vlV~gag~G~vG~~a~q~a~~-~Ga-~Vi~~~~~~~~~~~~~~----lGa~--~~~~~~~~~~~~~v~~~t~~~g~ 241 (379)
T 3iup_A 170 EGHSALVHTAAASNLGQMLNQICLK-DGI-KLVNIVRKQEQADLLKA----QGAV--HVCNAASPTFMQDLTEALVSTGA 241 (379)
T ss_dssp TTCSCEEESSTTSHHHHHHHHHHHH-HTC-CEEEEESSHHHHHHHHH----TTCS--CEEETTSTTHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHH-CCC-EEEEEECCHHHHHHHHh----CCCc--EEEeCCChHHHHHHHHHhcCCCc
Confidence 3555664 345566777788886 488 69999999998888864 5653 12222223433333221 2368
Q ss_pred cEEeeCCCCCChHhHHHHHHhcc
Q 047386 196 DVVDLDPYGSPSVFLDSAIQSVA 218 (581)
Q Consensus 196 DvIdLDPyGs~~~fld~A~~~l~ 218 (581)
|+| +|.-|.+ ..++.++++++
T Consensus 242 d~v-~d~~g~~-~~~~~~~~~l~ 262 (379)
T 3iup_A 242 TIA-FDATGGG-KLGGQILTCME 262 (379)
T ss_dssp CEE-EESCEEE-SHHHHHHHHHH
T ss_pred eEE-EECCCch-hhHHHHHHhcc
Confidence 987 5776542 34555666664
No 494
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=47.49 E-value=9.1 Score=30.48 Aligned_cols=33 Identities=18% Similarity=0.583 Sum_probs=20.0
Q ss_pred cceEEEEcCCCCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCccc
Q 047386 309 KLSYVYQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFN 360 (581)
Q Consensus 309 k~g~v~~C~~C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~~~ 360 (581)
.-...|.|..||.-.. .+ ...+..|++||.++.
T Consensus 17 ~~~v~Y~C~~Cg~~~~-------------l~------~~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 17 PATMIYLCADCGARNT-------------IQ------AKEVIRCRECGHRVM 49 (63)
T ss_dssp --CCCCBCSSSCCBCC-------------CC------SSSCCCCSSSCCCCC
T ss_pred CCCeEEECCCCCCeee-------------cC------CCCceECCCCCcEEE
Confidence 3467899999974210 01 112468999998763
No 495
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=47.37 E-value=55 Score=27.45 Aligned_cols=48 Identities=13% Similarity=0.159 Sum_probs=33.5
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 148 QVVALDNDKASVEACRRNIKFNGSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
+|..+|-++...+.++.-++..|.. +. ...+ |...+.. ..+|+|++|-
T Consensus 6 ~ILivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~a~~~l~~--~~~dlvllD~ 56 (137)
T 3cfy_A 6 RVLLVEDSTSLAILYKQYVKDEPYD----IF-HVETGRDAIQFIER--SKPQLIILDL 56 (137)
T ss_dssp EEEEECSCTTHHHHHHHHTTTSSSE----EE-EESSHHHHHHHHHH--HCCSEEEECS
T ss_pred eEEEEeCCHHHHHHHHHHHHhcCce----EE-EeCCHHHHHHHHHh--cCCCEEEEec
Confidence 6999999999999998888755542 32 3333 3444433 3689999995
No 496
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=47.30 E-value=37 Score=28.89 Aligned_cols=49 Identities=20% Similarity=0.234 Sum_probs=33.5
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH---HHHhhCCCcccEEeeCC
Q 047386 147 GQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR---VYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 147 ~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~---~~l~~~~~~fDvIdLDP 202 (581)
-+|..+|-++...+.++.-++..|.. +. ...++. ..+.. ..||+|++|-
T Consensus 15 ~~iLivdd~~~~~~~l~~~L~~~g~~----v~-~~~~~~~al~~~~~--~~~dlvl~D~ 66 (143)
T 3m6m_D 15 MRMLVADDHEANRMVLQRLLEKAGHK----VL-CVNGAEQVLDAMAE--EDYDAVIVDL 66 (143)
T ss_dssp CEEEEECSSHHHHHHHHHHHHC--CE----EE-EESSHHHHHHHHHH--SCCSEEEEES
T ss_pred ceEEEEeCCHHHHHHHHHHHHHcCCe----EE-EeCCHHHHHHHHhc--CCCCEEEEeC
Confidence 36999999999999999998866652 32 233333 34433 4699999995
No 497
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=47.17 E-value=1.3e+02 Score=28.88 Aligned_cols=78 Identities=19% Similarity=0.221 Sum_probs=47.7
Q ss_pred CCCCCeEEEecCcccHHHHHHhhhc--CCccEEEEEeC-------------CHHHHHHHHHHHHHhCCCCCCcEEEEehh
Q 047386 119 QLKPPRVLEALSASGLRALRYAREV--EGIGQVVALDN-------------DKASVEACRRNIKFNGSVACSKVESHLAD 183 (581)
Q Consensus 119 ~~~~~~VLDafsgSG~rgIr~a~E~--~Ga~~V~anD~-------------s~~Ave~i~~Ni~~N~~~~~~~v~v~~~D 183 (581)
.+.++++| ...|+|.+|...++++ .|+ +|+++|. ++...+.+.+-+...+ .++.++..|
T Consensus 12 ~l~gk~~l-VTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D 85 (280)
T 3pgx_A 12 SLQGRVAF-ITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQG----RKALTRVLD 85 (280)
T ss_dssp TTTTCEEE-EESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTT----CCEEEEECC
T ss_pred ccCCCEEE-EECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcC----CeEEEEEcC
Confidence 35566555 5567777777666543 475 6899998 6777777766666544 346677766
Q ss_pred HH------HHHhh---CCCcccEEeeCC
Q 047386 184 AR------VYMLT---HPKEFDVVDLDP 202 (581)
Q Consensus 184 A~------~~l~~---~~~~fDvIdLDP 202 (581)
.. .++.. .-.+.|+++.-.
T Consensus 86 v~~~~~v~~~~~~~~~~~g~id~lvnnA 113 (280)
T 3pgx_A 86 VRDDAALRELVADGMEQFGRLDVVVANA 113 (280)
T ss_dssp TTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 53 22221 113578887654
No 498
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=47.16 E-value=53 Score=26.96 Aligned_cols=49 Identities=18% Similarity=0.150 Sum_probs=33.0
Q ss_pred EEEEEeCCHHHHHHHHHHHHHh-CCCCCCcEEEEehh---HHHHHhhCCCcccEEeeCC
Q 047386 148 QVVALDNDKASVEACRRNIKFN-GSVACSKVESHLAD---ARVYMLTHPKEFDVVDLDP 202 (581)
Q Consensus 148 ~V~anD~s~~Ave~i~~Ni~~N-~~~~~~~v~v~~~D---A~~~l~~~~~~fDvIdLDP 202 (581)
+|..+|-++...+.++.-++.. +. .+.....+ |..++.. ..+|+|++|-
T Consensus 4 ~ilivdd~~~~~~~l~~~l~~~~~~----~~~~~~~~~~~a~~~~~~--~~~dlvllD~ 56 (130)
T 1dz3_A 4 KVCIADDNRELVSLLDEYISSQPDM----EVIGTAYNGQDCLQMLEE--KRPDILLLDI 56 (130)
T ss_dssp EEEEECSCHHHHHHHHHHHHTSTTE----EEEEEESSHHHHHHHHHH--HCCSEEEEES
T ss_pred EEEEEcCCHHHHHHHHHHHHhCCCc----eEEEEeCCHHHHHHHHhc--CCCCEEEEec
Confidence 5899999999999999988854 32 12113334 3444433 3589999995
No 499
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=47.12 E-value=1.3e+02 Score=29.43 Aligned_cols=78 Identities=13% Similarity=-0.038 Sum_probs=43.0
Q ss_pred CCCCCeEEEecCcc-cHHHHHHhhhc--CCccEEEEEeCCHHHHHHHHHHHHHhCCCCCCcEEEEehhHH------HHHh
Q 047386 119 QLKPPRVLEALSAS-GLRALRYAREV--EGIGQVVALDNDKASVEACRRNIKFNGSVACSKVESHLADAR------VYML 189 (581)
Q Consensus 119 ~~~~~~VLDafsgS-G~rgIr~a~E~--~Ga~~V~anD~s~~Ave~i~~Ni~~N~~~~~~~v~v~~~DA~------~~l~ 189 (581)
.+.++++|=.-+++ +.+|...++++ .|+ +|+++|.++...+.+.+-.+..+. +.++..|.. .++.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~-----~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLGV-----KLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHTC-----CEEEECCTTCHHHHHHHHH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCC-----eEEEEcCCCCHHHHHHHHH
Confidence 45566776555432 14444333322 476 599999998766666665555442 355666543 2222
Q ss_pred h---CCCcccEEeeCC
Q 047386 190 T---HPKEFDVVDLDP 202 (581)
Q Consensus 190 ~---~~~~fDvIdLDP 202 (581)
. .-.+.|+++.--
T Consensus 101 ~~~~~~g~iD~lVnnA 116 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAV 116 (296)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 1 113579887654
No 500
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=46.57 E-value=5.3 Score=39.71 Aligned_cols=34 Identities=24% Similarity=0.615 Sum_probs=21.0
Q ss_pred EEcCCCCceeEeeccccccCCCCcccccCCCCCCCCCcCCCCCCcccc
Q 047386 314 YQCIGCDSFHLQPVGRTASNKNNSVRYLPGFGPVVPQLCSDCGKKFNM 361 (581)
Q Consensus 314 ~~C~~C~~~~~q~lgr~~~~~~~~~~~~~~~~~~~~~~C~~Cg~~~~~ 361 (581)
.||+.||+..++.+.... |..+-.|+.|+..+.+
T Consensus 35 ~yCPnCG~~~l~~f~nN~--------------PVaDF~C~~C~EeyEL 68 (257)
T 4esj_A 35 SYCPNCGNNPLNHFENNR--------------PVADFYCNHCSEEFEL 68 (257)
T ss_dssp CCCTTTCCSSCEEC------------------CCCEEECTTTCCEEEE
T ss_pred CcCCCCCChhhhhccCCC--------------cccccccCCcchhhee
Confidence 379999986554332211 3444579999987654
Done!