Your job contains 1 sequence.
>047388
MIATLKAEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMM
HTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLG
GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPI
AERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTG
RGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHA
VTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047388
(352 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2084558 - symbol:DMC1 "DISRUPTION OF MEIOTIC C... 1562 2.2e-160 1
UNIPROTKB|Q50LF6 - symbol:tilDmc1 "RecA homolog Dmc1" spe... 1000 7.9e-101 1
UNIPROTKB|Q50LF7 - symbol:eDmc1 "RecA homolog DMC1" speci... 987 1.9e-99 1
UNIPROTKB|F1NI95 - symbol:DMC1 "Uncharacterized protein" ... 986 2.4e-99 1
MGI|MGI:105393 - symbol:Dmc1 "DMC1 dosage suppressor of m... 986 2.4e-99 1
UNIPROTKB|F1SKQ1 - symbol:DMC1 "Uncharacterized protein" ... 980 1.0e-98 1
RGD|1307611 - symbol:Dmc1 "DMC1 dosage suppressor of mck1... 979 1.3e-98 1
UNIPROTKB|E2RK50 - symbol:DMC1 "Uncharacterized protein" ... 978 1.7e-98 1
ZFIN|ZDB-GENE-060331-93 - symbol:dmc1 "DMC1 dosage suppre... 978 1.7e-98 1
GENEDB_PFALCIPARUM|MAL8P1.76 - symbol:MAL8P1.76 "meiotic ... 975 3.5e-98 1
UNIPROTKB|Q8IB05 - symbol:MAL8P1.76 "Meiotic recombinatio... 975 3.5e-98 1
UNIPROTKB|Q9DGC3 - symbol:Dmc1 "DMC1" species:8330 "Cynop... 975 3.5e-98 1
UNIPROTKB|F1N1D2 - symbol:DMC1 "Uncharacterized protein" ... 974 4.5e-98 1
UNIPROTKB|Q14565 - symbol:DMC1 "Meiotic recombination pro... 974 4.5e-98 1
UNIPROTKB|Q9GRA3 - symbol:CnDmc1 "DMC1 homologue CnDMC1" ... 913 1.3e-91 1
DICTYBASE|DDB_G0273611 - symbol:rad51-2 "putative DNA rep... 885 1.2e-88 1
DICTYBASE|DDB_G0273139 - symbol:rad51-1 "putative DNA rep... 885 1.2e-88 1
POMBASE|SPAC8E11.03c - symbol:dmc1 "RecA family ATPase Dm... 884 1.6e-88 1
UNIPROTKB|Q9C0P6 - symbol:dmc1 "Putative DMC1 protein" sp... 871 3.7e-87 1
UNIPROTKB|Q6FKF0 - symbol:CAGL0L12100g "Similar to unipro... 868 7.7e-87 1
UNIPROTKB|Q06609 - symbol:RAD51 "DNA repair protein RAD51... 866 1.3e-86 1
UNIPROTKB|B0M1M6 - symbol:pigRAD51 "Rad51" species:9823 "... 866 1.3e-86 1
SGD|S000000981 - symbol:DMC1 "Meiosis-specific protein re... 863 2.6e-86 1
UNIPROTKB|Q2KJ94 - symbol:RAD51 "DNA repair protein RAD51... 862 3.3e-86 1
UNIPROTKB|Q8MKI8 - symbol:RAD51 "DNA repair protein RAD51... 862 3.3e-86 1
UNIPROTKB|Q74ZU7 - symbol:AGR101C "AGR101Cp" species:2848... 862 3.3e-86 1
MGI|MGI:97890 - symbol:Rad51 "RAD51 homolog" species:1009... 860 5.4e-86 1
UNIPROTKB|G1K2Z8 - symbol:RAD51 "Uncharacterized protein"... 859 6.9e-86 1
UNIPROTKB|P37383 - symbol:RAD51A "DNA repair protein RAD5... 859 6.9e-86 1
UNIPROTKB|P70099 - symbol:RAD51 "DNA repair protein RAD51... 858 8.9e-86 1
UNIPROTKB|Q9P972 - symbol:LIM15/DMC1 homolog "LIM15/DMC1 ... 855 1.8e-85 1
UNIPROTKB|O77507 - symbol:RAD51 "DNA repair protein RAD51... 854 2.4e-85 1
ZFIN|ZDB-GENE-040426-2286 - symbol:rad51 "RAD51 homolog (... 852 3.8e-85 1
CGD|CAL0001214 - symbol:RAD51 species:5476 "Candida albic... 850 6.2e-85 1
UNIPROTKB|Q59UY8 - symbol:RAD51 "Putative uncharacterized... 850 6.2e-85 1
SGD|S000000897 - symbol:RAD51 "Strand exchange protein" s... 849 8.0e-85 1
UNIPROTKB|B6JXU7 - symbol:SJAG_01410 "DNA repair protein ... 842 4.4e-84 1
WB|WBGene00004297 - symbol:rad-51 species:6239 "Caenorhab... 842 4.4e-84 1
UNIPROTKB|G5EGG8 - symbol:rad-51 "RecA/Rad51/Dmc1-like pr... 842 4.4e-84 1
UNIPROTKB|Q95Q25 - symbol:rad-51 "Protein RAD-51, isoform... 842 4.4e-84 1
TAIR|locus:2147092 - symbol:RAD51 species:3702 "Arabidops... 833 3.9e-83 1
POMBASE|SPAC644.14c - symbol:rad51 "RecA family recombina... 828 1.3e-82 1
UNIPROTKB|Q6BP40 - symbol:DEHA2E16742g "DEHA2E16742p" spe... 821 7.4e-82 1
ASPGD|ASPL0000094064 - symbol:AN11929 species:162425 "Eme... 812 6.6e-81 1
ASPGD|ASPL0000098803 - symbol:AN11930 species:162425 "Eme... 812 6.6e-81 1
UNIPROTKB|Q5ARI8 - symbol:AN9092.2 "Meiotic recombination... 812 6.6e-81 1
UNIPROTKB|Q0MR21 - symbol:Q0MR21 "DMC1-like protein" spec... 809 1.4e-80 1
UNIPROTKB|A3E3X6 - symbol:rad51 "Rad51" species:263815 "P... 801 9.7e-80 1
UNIPROTKB|E2R3A3 - symbol:DMC1 "Uncharacterized protein" ... 444 1.2e-79 2
UNIPROTKB|A3E3X4 - symbol:rad51 "Rad51" species:4754 "Pne... 799 1.6e-79 1
UNIPROTKB|B4DMW6 - symbol:DMC1 "Meiotic recombination pro... 445 2.5e-79 2
UNIPROTKB|Q4WAR2 - symbol:AFUA_7G02200 "Meiotic recombina... 784 6.2e-78 1
FB|FBgn0003479 - symbol:spn-A "spindle A" species:7227 "D... 776 4.3e-77 1
ASPGD|ASPL0000057020 - symbol:uvsC species:162425 "Emeric... 765 6.3e-76 1
GENEDB_PFALCIPARUM|PF11_0087 - symbol:PF11_0087 "Rad51 ho... 736 7.5e-73 1
UNIPROTKB|Q8IIS8 - symbol:Rad51 "Rad51 homolog" species:3... 736 7.5e-73 1
UNIPROTKB|Q0U9F0 - symbol:SNOG_11614 "Putative uncharacte... 572 7.7e-70 2
UNIPROTKB|B0QYE0 - symbol:DMC1 "Meiotic recombination pro... 371 9.9e-54 2
RGD|1563603 - symbol:Rad51 "RAD51 homolog (S. cerevisiae)... 501 6.0e-48 1
UNIPROTKB|E9PNT5 - symbol:RAD51 "DNA repair protein RAD51... 437 3.6e-41 1
UNIPROTKB|B0QYE1 - symbol:DMC1 "Meiotic recombination pro... 362 3.2e-33 1
UNIPROTKB|E9PJ30 - symbol:RAD51 "DNA repair protein RAD51... 342 4.2e-31 1
UNIPROTKB|J9NV21 - symbol:DMC1 "Uncharacterized protein" ... 306 2.8e-27 1
ZFIN|ZDB-GENE-040426-2750 - symbol:rad51b "RAD51 homolog ... 255 3.4e-21 1
MGI|MGI:1099436 - symbol:Rad51b "RAD51 homolog B" species... 244 5.7e-21 2
UNIPROTKB|O15315 - symbol:RAD51B "DNA repair protein RAD5... 243 3.0e-20 2
UNIPROTKB|C9JYJ0 - symbol:RAD51B "DNA repair protein RAD5... 243 9.1e-20 2
UNIPROTKB|E1BE93 - symbol:RAD51B "Uncharacterized protein... 234 7.2e-19 2
RGD|1560681 - symbol:Rad51b "RAD51 homolog B (S. cerevisi... 219 7.6e-18 1
UNIPROTKB|E1BVI8 - symbol:RAD51B "Uncharacterized protein... 210 8.3e-17 1
TAIR|locus:2174577 - symbol:XRCC3 "homolog of X-ray repai... 217 1.1e-16 1
UNIPROTKB|E2R3P3 - symbol:RAD51B "Uncharacterized protein... 207 1.8e-16 1
UNIPROTKB|E1BRQ1 - symbol:RAD51C "Uncharacterized protein... 144 8.2e-16 2
UNIPROTKB|F1NUE9 - symbol:RAD51C "Uncharacterized protein... 144 8.6e-16 2
UNIPROTKB|F1S9W9 - symbol:XRCC3 "Uncharacterized protein"... 216 9.1e-16 1
UNIPROTKB|F1PMI7 - symbol:RAD51C "Uncharacterized protein... 216 1.3e-15 1
MGI|MGI:2150020 - symbol:Rad51c "RAD51 homolog C" species... 215 1.6e-15 1
UNIPROTKB|F1MW99 - symbol:RAD51C "Uncharacterized protein... 215 2.0e-15 1
UNIPROTKB|F1SA21 - symbol:RAD51B "Uncharacterized protein... 197 2.5e-15 1
UNIPROTKB|Q08DH8 - symbol:XRCC3 "DNA repair protein XRCC3... 211 3.4e-15 1
DICTYBASE|DDB_G0283637 - symbol:xrcc3 "putative DNA repai... 149 5.2e-15 2
UNIPROTKB|Q8R2J9 - symbol:RAD51C "DNA repair protein RAD5... 207 6.6e-15 2
UNIPROTKB|J3QKK3 - symbol:RAD51C "DNA repair protein RAD5... 206 1.6e-14 1
UNIPROTKB|O43502 - symbol:RAD51C "DNA repair protein RAD5... 206 2.3e-14 1
SGD|S000002411 - symbol:RAD57 "Protein that stimulates st... 208 2.5e-14 1
UNIPROTKB|F1M525 - symbol:Rad51c "Protein Rad51c" species... 203 3.1e-14 1
RGD|1563765 - symbol:Rad51c "Rad51 homolog c (S. cerevisi... 203 4.7e-14 1
ZFIN|ZDB-GENE-041010-204 - symbol:rad51c "rad51 homolog C... 197 2.3e-13 1
DICTYBASE|DDB_G0284507 - symbol:DDB_G0284507 "putative Ra... 129 2.8e-13 2
UNIPROTKB|Q5ZM26 - symbol:XRCC3 "Uncharacterized protein"... 191 1.0e-12 1
UNIPROTKB|E2RAE7 - symbol:XRCC3 "Uncharacterized protein"... 190 1.4e-12 1
FB|FBgn0003480 - symbol:spn-B "spindle B" species:7227 "D... 186 3.8e-12 1
UNIPROTKB|F1S262 - symbol:RAD51C "Uncharacterized protein... 185 3.9e-12 1
UNIPROTKB|O43542 - symbol:XRCC3 "DNA repair protein XRCC3... 183 9.0e-12 1
RGD|1306849 - symbol:Xrcc3 "X-ray repair complementing de... 179 2.8e-11 1
FB|FBgn0003482 - symbol:spn-D "spindle D" species:7227 "D... 173 4.2e-11 1
UNIPROTKB|Q2HJ51 - symbol:RAD51D "DNA repair protein RAD5... 173 1.1e-10 1
UNIPROTKB|G4MNW7 - symbol:MGG_06985 "Uncharacterized prot... 177 1.3e-10 1
ASPGD|ASPL0000051939 - symbol:AN10145 species:162425 "Eme... 176 1.8e-10 1
MGI|MGI:1921585 - symbol:Xrcc3 "X-ray repair complementin... 171 2.4e-10 1
WARNING: Descriptions of 40 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2084558 [details] [associations]
symbol:DMC1 "DISRUPTION OF MEIOTIC CONTROL 1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA;IDA] [GO:0006281
"DNA repair" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0051026 "chiasma assembly" evidence=IGI;IMP] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA;TAS] [GO:0010212 "response to ionizing radiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0006259 EMBL:AP001300 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0000733 GO:GO:0008094 GO:GO:0051026 EMBL:D45415 EMBL:U76670
EMBL:BT023447 IPI:IPI00517160 PIR:JC4092 RefSeq:NP_188928.2
UniGene:At.50216 ProteinModelPortal:Q39009 SMR:Q39009 IntAct:Q39009
MINT:MINT-5222993 STRING:Q39009 EnsemblPlants:AT3G22880.1
GeneID:821860 KEGG:ath:AT3G22880 GeneFarm:4784 TAIR:At3g22880
eggNOG:COG0468 HOGENOM:HOG000227426 InParanoid:Q39009 KO:K10872
OMA:FFQDIDL PhylomeDB:Q39009 ProtClustDB:PLN03187
Genevestigator:Q39009 GermOnline:AT3G22880 GO:GO:0000707
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 Uniprot:Q39009
Length = 344
Score = 1562 (554.9 bits), Expect = 2.2e-160, P = 2.2e-160
Identities = 306/352 (86%), Positives = 332/352 (94%)
Query: 1 MIATLKAEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMM 60
M+A+LKAEE SQ+QLVERE+ D++EDLFE IDKLI+QGINAGDVKKLQ+AGI+TCNGLMM
Sbjct: 1 MMASLKAEETSQMQLVEREENDEDEDLFEMIDKLIAQGINAGDVKKLQEAGIHTCNGLMM 60
Query: 61 HTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLG 120
HTKK+LTGIKGLSEAKV+KICEAAEKIVNFGY+TGSDAL++RK+V+KITTG QALD+LLG
Sbjct: 61 HTKKNLTGIKGLSEAKVDKICEAAEKIVNFGYMTGSDALIKRKSVVKITTGCQALDDLLG 120
Query: 121 GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPI 180
GGIET AITEAFGEFRSGKTQLAHTLCV TQLPTNM+GGNGKVAYIDTEGTFRPDRIVPI
Sbjct: 121 GGIETSAITEAFGEFRSGKTQLAHTLCVTTQLPTNMKGGNGKVAYIDTEGTFRPDRIVPI 180
Query: 181 AERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTG 240
AERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFR+LIVDS+IALFRVDFTG
Sbjct: 181 AERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRILIVDSIIALFRVDFTG 240
Query: 241 RGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHA 300
RGELADRQQKL QMLSRL KI+EEFNVAVYMTNQVIADPGGG+FISDPKKPAGGHVLAHA
Sbjct: 241 RGELADRQQKLAQMLSRLIKIAEEFNVAVYMTNQVIADPGGGMFISDPKKPAGGHVLAHA 300
Query: 301 VTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
TIRL+FRKGKG+ RVCKV+DAPNL EAEA SF +IT GGIADAKD
Sbjct: 301 ATIRLLFRKGKGDTRVCKVYDAPNLAEAEA-SF-------QITQGGIADAKD 344
>UNIPROTKB|Q50LF6 [details] [associations]
symbol:tilDmc1 "RecA homolog Dmc1" species:8128
"Oreochromis niloticus" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504 GO:GO:0000150
EMBL:AERX01002235 EMBL:AB182646 RefSeq:XP_003438754.1
UniGene:Oni.44877 SMR:Q50LF6 Ensembl:ENSONIT00000024880
GeneID:100534532 Uniprot:Q50LF6
Length = 342
Score = 1000 (357.1 bits), Expect = 7.9e-101, P = 7.9e-101
Identities = 207/344 (60%), Positives = 255/344 (74%)
Query: 14 QLVEREDI--DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKG 71
Q+VE + DDEE F+ ID L GIN D+KKL+ GI T G+ M T+K L IKG
Sbjct: 7 QVVEDDSSFQDDEESFFQDIDLLQKHGINMADIKKLKSVGICTVKGIQMTTRKALCNIKG 66
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEA 131
LSEAKVEKI EAA K++N G+ T + RRK V +TTGSQ D+LLGGG+E+ AITEA
Sbjct: 67 LSEAKVEKIKEAAGKMLNVGFQTAFEYSARRKQVFHVTTGSQEFDKLLGGGVESMAITEA 126
Query: 132 FGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV 191
FGEFR+GKTQL+HTLCV QLP GKV +IDTE TFRPDR+ IA+RF +D AV
Sbjct: 127 FGEFRTGKTQLSHTLCVTAQLPGEDGYSGGKVIFIDTENTFRPDRLRDIADRFNVDHDAV 186
Query: 192 LDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQ 249
LDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQ
Sbjct: 187 LDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQ 246
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFR 308
KL QMLSRL KISEE+NVAV++TNQ+ ADPG G+ F +DPKKP GGH+LAHA T R+ R
Sbjct: 247 KLAQMLSRLQKISEEYNVAVFITNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLR 306
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+ K+FD+P++PE EA +F+ I+ GG+ DAKD
Sbjct: 307 KGRGEMRIAKIFDSPDMPENEA-TFA-------ISAGGVTDAKD 342
>UNIPROTKB|Q50LF7 [details] [associations]
symbol:eDmc1 "RecA homolog DMC1" species:7937 "Anguilla
japonica" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 EMBL:AB182645 EMBL:AB201845
ProteinModelPortal:Q50LF7 SMR:Q50LF7 Uniprot:Q50LF7
Length = 339
Score = 987 (352.5 bits), Expect = 1.9e-99, P = 1.9e-99
Identities = 206/344 (59%), Positives = 256/344 (74%)
Query: 14 QLVERED--IDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKG 71
Q+VE E DDEE F+ ID L GIN D+KKL+ GI T G+ M T++ L +KG
Sbjct: 4 QVVENEVGYQDDEESFFQDIDLLQKHGINMADIKKLKSIGICTVKGIQMTTRRALCNVKG 63
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEA 131
LSEAKV+KI EAA K+++ G++T + RRK V ITTGS D+L+GGGIE+ AITEA
Sbjct: 64 LSEAKVDKIKEAAGKLLSNGFLTAFEYSERRKQVFHITTGSLEFDKLIGGGIESMAITEA 123
Query: 132 FGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV 191
FGEFR+GKTQL+HTLCV QLP GKV +IDTE TFRPDR+ IA+RF +D AV
Sbjct: 124 FGEFRTGKTQLSHTLCVTAQLPGEDGYTGGKVIFIDTENTFRPDRLKDIADRFSVDQEAV 183
Query: 192 LDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQ 249
LDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQ
Sbjct: 184 LDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQ 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFR 308
KL QMLSRL KISEE+NVAV++TNQ+ ADPG G+ F +DPKKP GGH+LAHA T R+ R
Sbjct: 244 KLAQMLSRLQKISEEYNVAVFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+ K+FD+P++PE EA +F+ IT GGIADAK+
Sbjct: 304 KGRGEMRIAKIFDSPDMPENEA-TFA-------ITAGGIADAKE 339
>UNIPROTKB|F1NI95 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0001541 "ovarian follicle development" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007286 "spermatid development"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0000794 GO:GO:0000781 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:AADN02006146 IPI:IPI00578251 Ensembl:ENSGALT00000019979
Uniprot:F1NI95
Length = 346
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 206/353 (58%), Positives = 257/353 (72%)
Query: 4 TLKAEEQSQLQLVERED--IDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMH 61
T+KA E Q+V+ E DDEE F+ ID L GIN D+KKL+ GI T G+ M
Sbjct: 4 TMKAMED---QVVQEESGYHDDEESFFQDIDLLQKHGINVADIKKLKSVGICTIKGVQMT 60
Query: 62 TKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGG 121
T++ L +KGLSE KV+KI EAA K++ G++T + +RK V ITTGSQ D+LLGG
Sbjct: 61 TRRALCNVKGLSEVKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGG 120
Query: 122 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 181
GIE+ AITEAFGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA
Sbjct: 121 GIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGPKGYTGGKIIFIDTENTFRPDRLRDIA 180
Query: 182 ERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFT 239
+RF +D AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+
Sbjct: 181 DRFNVDHDAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFS 240
Query: 240 GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLA 298
GRGELA+RQQKL QMLSRL KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LA
Sbjct: 241 GRGELAERQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPVGGHILA 300
Query: 299 HAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAK 351
HA T R+ RKG+GE R+ K++D+P +PE EA +F+ ITPGGI DAK
Sbjct: 301 HASTTRISLRKGRGELRIAKIYDSPEMPENEA-TFA-------ITPGGIGDAK 345
>MGI|MGI:105393 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000781 "chromosome, telomeric region" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0001541 "ovarian follicle development" evidence=IMP]
[GO:0001556 "oocyte maturation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005694 "chromosome"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007129
"synapsis" evidence=IMP] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007286 "spermatid
development" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:105393 GO:GO:0005524 GO:GO:0005654
GO:GO:0007286 GO:GO:0006281 GO:GO:0016887 Reactome:REACT_120463
GO:GO:0003690 GO:GO:0003697 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 Reactome:REACT_27235
SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239 GO:GO:0008094
eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:D58419 EMBL:D64107 IPI:IPI00126394 PIR:JC4191
RefSeq:NP_034189.1 UniGene:Mm.2524 ProteinModelPortal:Q61880
SMR:Q61880 STRING:Q61880 PhosphoSite:Q61880 PRIDE:Q61880
Ensembl:ENSMUST00000023065 GeneID:13404 KEGG:mmu:13404
GeneTree:ENSGT00550000075091 InParanoid:Q61880 NextBio:283799
Bgee:Q61880 Genevestigator:Q61880 GermOnline:ENSMUSG00000022429
GO:GO:0000150 Uniprot:Q61880
Length = 340
Score = 986 (352.1 bits), Expect = 2.4e-99, P = 2.4e-99
Identities = 205/344 (59%), Positives = 253/344 (73%)
Query: 14 QLVERED--IDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKG 71
Q+V+ E DDEE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KG
Sbjct: 5 QVVQEESGFQDDEESLFQDIDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKG 64
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEA 131
LSEAKVEKI EAA K++ G++T RRK V ITTGSQ D+LLGGGIE+ AITEA
Sbjct: 65 LSEAKVEKIKEAANKLIEPGFLTAFQYSERRKMVFHITTGSQEFDKLLGGGIESMAITEA 124
Query: 132 FGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV 191
FGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D AV
Sbjct: 125 FGEFRTGKTQLSHTLCVTAQLPGTGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHEAV 184
Query: 192 LDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQ 249
LDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQ
Sbjct: 185 LDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQ 244
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFR 308
KL QMLSRL KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+ R
Sbjct: 245 KLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLR 304
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+ K++D+P +PE EA +F+ IT GGI DAK+
Sbjct: 305 KGRGELRIAKIYDSPEMPENEA-TFA-------ITAGGIGDAKE 340
>UNIPROTKB|F1SKQ1 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:FP102457 RefSeq:XP_003126070.1
Ensembl:ENSSSCT00000000109 GeneID:100522866 KEGG:ssc:100522866
Uniprot:F1SKQ1
Length = 340
Score = 980 (350.0 bits), Expect = 1.0e-98, P = 1.0e-98
Identities = 202/347 (58%), Positives = 255/347 (73%)
Query: 9 EQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTG 68
++ Q+ L E D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L
Sbjct: 2 KEDQVVLEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCN 61
Query: 69 IKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAI 128
+KGLSEAKV+KI EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AI
Sbjct: 62 VKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAI 121
Query: 129 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP 188
TEAFGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D
Sbjct: 122 TEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 189 GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELAD 246
AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAE 241
Query: 247 RQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRL 305
RQQKL QMLSRL KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+
Sbjct: 242 RQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPVGGHILAHASTTRI 301
Query: 306 MFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RKG+GE R+ K++D+P +PE EA +F+ IT GGI DAK+
Sbjct: 302 SLRKGRGELRIAKIYDSPEMPENEA-TFA-------ITAGGIGDAKE 340
>RGD|1307611 [details] [associations]
symbol:Dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:10116
"Rattus norvegicus" [GO:0000239 "pachytene" evidence=IEA;ISO]
[GO:0000781 "chromosome, telomeric region" evidence=IEA;ISO]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA;ISO]
[GO:0001541 "ovarian follicle development" evidence=IEA;ISO]
[GO:0001556 "oocyte maturation" evidence=IEA;ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007276 "gamete generation" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0007286 "spermatid development"
evidence=IEA;ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 RGD:1307611 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006281 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141
GO:GO:0000239 EMBL:CH473950 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 OrthoDB:EOG4F7NKC
GeneTree:ENSGT00550000075091 IPI:IPI00366298 RefSeq:NP_001124039.1
UniGene:Rn.45495 Ensembl:ENSRNOT00000018526 GeneID:362960
KEGG:rno:362960 UCSC:RGD:1307611 NextBio:681931 Uniprot:D3ZJ85
Length = 340
Score = 979 (349.7 bits), Expect = 1.3e-98, P = 1.3e-98
Identities = 204/344 (59%), Positives = 253/344 (73%)
Query: 14 QLVERED--IDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKG 71
Q+V+ E D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KG
Sbjct: 5 QVVQEESGFQDEEESLFQDIDLLQKHGINMADIKKLKSVGICTIKGIQMTTRRALCNVKG 64
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEA 131
LSEAKVEKI EAA K++ G++T +RK V ITTGSQ D+LLGGGIE+ AITEA
Sbjct: 65 LSEAKVEKIKEAANKLIEPGFLTAFQYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEA 124
Query: 132 FGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV 191
FGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D AV
Sbjct: 125 FGEFRTGKTQLSHTLCVTAQLPGADGYSGGKIIFIDTENTFRPDRLRDIADRFNVDHDAV 184
Query: 192 LDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQ 249
LDN++YARAYT EHQ LL +AAK EE F+LLIVDS++ALFRVDF+GRGELA+RQQ
Sbjct: 185 LDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIVDSIMALFRVDFSGRGELAERQQ 244
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFR 308
KL QMLSRL KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+ R
Sbjct: 245 KLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLR 304
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+ K++D+P +PE EA +F+ IT GGI DAK+
Sbjct: 305 KGRGELRIAKIYDSPEMPENEA-TFA-------ITTGGIGDAKE 340
>UNIPROTKB|E2RK50 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 KO:K10872 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314 RefSeq:XP_849984.1
ProteinModelPortal:E2RK50 Ensembl:ENSCAFT00000002150 GeneID:608268
KEGG:cfa:608268 NextBio:20893933 Uniprot:E2RK50
Length = 340
Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
Identities = 202/347 (58%), Positives = 255/347 (73%)
Query: 9 EQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTG 68
++ Q+ L E D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L
Sbjct: 2 KEDQVVLEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCN 61
Query: 69 IKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAI 128
+KGLSEAKV+KI EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AI
Sbjct: 62 VKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAI 121
Query: 129 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP 188
TEAFGEFR+GKTQL+HTLCV QLP GK+ +IDTE TFRPDR+ IA+RF +D
Sbjct: 122 TEAFGEFRTGKTQLSHTLCVTAQLPGAGGYSGGKIIFIDTENTFRPDRLRDIADRFNVDH 181
Query: 189 GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELAD 246
AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+
Sbjct: 182 DAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAE 241
Query: 247 RQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRL 305
RQQKL QMLSRL KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+
Sbjct: 242 RQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRV 301
Query: 306 MFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RKG+GE R+ K++D+P +PE EA +F+ IT GGI DAK+
Sbjct: 302 SLRKGRGELRIAKIYDSPEMPENEA-TFA-------ITAGGIGDAKE 340
>ZFIN|ZDB-GENE-060331-93 [details] [associations]
symbol:dmc1 "DMC1 dosage suppressor of mck1 homolog,
meiosis-specific homologous recombination (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
ZFIN:ZDB-GENE-060331-93 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 CTD:11144 HOVERGEN:HBG001504
EMBL:AB182999 IPI:IPI00832294 RefSeq:NP_001018618.1
UniGene:Dr.92382 ProteinModelPortal:Q50LF4 SMR:Q50LF4 STRING:Q50LF4
GeneID:553953 KEGG:dre:553953 InParanoid:Q50LF4 NextBio:20880545
Uniprot:Q50LF4
Length = 342
Score = 978 (349.3 bits), Expect = 1.7e-98, P = 1.7e-98
Identities = 203/344 (59%), Positives = 253/344 (73%)
Query: 14 QLVERED--IDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKG 71
Q +E E DDEE F+ I+ L GIN D+KKL+ GI T G+ M T++ L IKG
Sbjct: 7 QTLEEESGYQDDEESFFQDIELLQKHGINVADIKKLKSVGICTVKGIQMTTRRALCNIKG 66
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEA 131
LSEAKV+KI EAA K++ G+ T S+ ++RK V ITTGS D+LLGGG+E+ AITEA
Sbjct: 67 LSEAKVDKIKEAAGKLLTCGFQTASEYCIKRKQVFHITTGSLEFDKLLGGGVESMAITEA 126
Query: 132 FGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV 191
FGEFR+GKTQL+HTLCV QLP GKV +IDTE TFRP+R+ IA+RF +D AV
Sbjct: 127 FGEFRTGKTQLSHTLCVTAQLPGEYGYTGGKVIFIDTENTFRPERLKDIADRFNVDHEAV 186
Query: 192 LDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQ 249
LDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQ
Sbjct: 187 LDNVLYARAYTSEHQMELLDFVAAKFHEEGGVFKLLIIDSIMALFRVDFSGRGELAERQQ 246
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFR 308
KL QMLSRL KISEE+NVAV++TNQ+ ADPG G+ F +DPKKP GGH+LAHA T R+ R
Sbjct: 247 KLAQMLSRLQKISEEYNVAVFVTNQMTADPGAGMTFQADPKKPIGGHILAHASTTRISLR 306
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+ E R+ K+FD+P++PE EA +F+ IT GGI DAKD
Sbjct: 307 KGRAELRIAKIFDSPHMPENEA-TFA-------ITAGGITDAKD 342
>GENEDB_PFALCIPARUM|MAL8P1.76 [details] [associations]
symbol:MAL8P1.76 "meiotic recombination protein
dmc1-like protein" species:5833 "Plasmodium falciparum" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 199/355 (56%), Positives = 258/355 (72%)
Query: 2 IATLKAEEQ-SQLQLV-EREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLM 59
+ATL A + S++ L E ED +E F+ I+KL GINA D+ KL+ +G T L+
Sbjct: 1 MATLPASKSASKVALTSEVEDEGIKEHTFQEIEKLQDLGINAADINKLKGSGYCTILSLI 60
Query: 60 MHTKKHLTGIKGLSEAKVEKICEAAEKIVNFG-YITGSDALLRRKAVIKITTGSQALDEL 118
TKK L +KG+SEAKV+KI E A KI N +IT ++ + +R V+KITTGS D+
Sbjct: 61 QTTKKELCNVKGISEAKVDKILEVASKIENCSSFITANELVQKRSKVLKITTGSTVFDQT 120
Query: 119 LGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 178
LGGGIE+ ITE FGE R GKTQ+ HTL V QLP ++ GGNGKV YIDTEGTFRP+++
Sbjct: 121 LGGGIESMCITELFGENRCGKTQVCHTLAVTAQLPKSLNGGNGKVCYIDTEGTFRPEKVC 180
Query: 179 PIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDF 238
IAER+G+D AVLDNI+YARA+T+EH Y LL AAKM EEPF LL+VDS+I+LFRVDF
Sbjct: 181 KIAERYGLDGEAVLDNILYARAFTHEHLYQLLAISAAKMCEEPFALLVVDSIISLFRVDF 240
Query: 239 TGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVL 297
+GRGEL++RQQKL + +S L+K+SE+FN+A+ +TNQV++DPG + FI++P KP GGHV+
Sbjct: 241 SGRGELSERQQKLNKTMSILSKLSEQFNIAILITNQVMSDPGATMTFIANPMKPVGGHVI 300
Query: 298 AHAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
HA TIRL RKGKG+QRVCKV+DAPNLPE E I +++ G+ DA D
Sbjct: 301 GHASTIRLSLRKGKGDQRVCKVYDAPNLPEVECI--------FQLSDKGVIDATD 347
>UNIPROTKB|Q8IB05 [details] [associations]
symbol:MAL8P1.76 "Meiotic recombination protein dmc1-like
protein" species:36329 "Plasmodium falciparum 3D7" [GO:0000794
"condensed nuclear chromosome" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0003677 GO:GO:0006281 GO:GO:0000794 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:AL844507
ProtClustDB:PTZ00035 RefSeq:XP_001349356.2
ProteinModelPortal:Q8IB05 EnsemblProtists:MAL8P1.76:mRNA
GeneID:2655426 KEGG:pfa:MAL8P1.76 EuPathDB:PlasmoDB:PF3D7_0816800
Uniprot:Q8IB05
Length = 347
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 199/355 (56%), Positives = 258/355 (72%)
Query: 2 IATLKAEEQ-SQLQLV-EREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLM 59
+ATL A + S++ L E ED +E F+ I+KL GINA D+ KL+ +G T L+
Sbjct: 1 MATLPASKSASKVALTSEVEDEGIKEHTFQEIEKLQDLGINAADINKLKGSGYCTILSLI 60
Query: 60 MHTKKHLTGIKGLSEAKVEKICEAAEKIVNFG-YITGSDALLRRKAVIKITTGSQALDEL 118
TKK L +KG+SEAKV+KI E A KI N +IT ++ + +R V+KITTGS D+
Sbjct: 61 QTTKKELCNVKGISEAKVDKILEVASKIENCSSFITANELVQKRSKVLKITTGSTVFDQT 120
Query: 119 LGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 178
LGGGIE+ ITE FGE R GKTQ+ HTL V QLP ++ GGNGKV YIDTEGTFRP+++
Sbjct: 121 LGGGIESMCITELFGENRCGKTQVCHTLAVTAQLPKSLNGGNGKVCYIDTEGTFRPEKVC 180
Query: 179 PIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDF 238
IAER+G+D AVLDNI+YARA+T+EH Y LL AAKM EEPF LL+VDS+I+LFRVDF
Sbjct: 181 KIAERYGLDGEAVLDNILYARAFTHEHLYQLLAISAAKMCEEPFALLVVDSIISLFRVDF 240
Query: 239 TGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVL 297
+GRGEL++RQQKL + +S L+K+SE+FN+A+ +TNQV++DPG + FI++P KP GGHV+
Sbjct: 241 SGRGELSERQQKLNKTMSILSKLSEQFNIAILITNQVMSDPGATMTFIANPMKPVGGHVI 300
Query: 298 AHAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
HA TIRL RKGKG+QRVCKV+DAPNLPE E I +++ G+ DA D
Sbjct: 301 GHASTIRLSLRKGKGDQRVCKVYDAPNLPEVECI--------FQLSDKGVIDATD 347
>UNIPROTKB|Q9DGC3 [details] [associations]
symbol:Dmc1 "DMC1" species:8330 "Cynops pyrrhogaster"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238
HOVERGEN:HBG001504 GO:GO:0000150 HSSP:Q06609 EMBL:AB041944
ProteinModelPortal:Q9DGC3 SMR:Q9DGC3 Uniprot:Q9DGC3
Length = 342
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 202/344 (58%), Positives = 253/344 (73%)
Query: 14 QLVERED--IDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKG 71
Q+VE E D+EE F+ ID L GIN D+KKL+ GI T G+ M TKK L IKG
Sbjct: 7 QVVEEEVGLHDEEESFFQDIDMLQKHGINVADIKKLKSVGICTVKGIQMTTKKALCNIKG 66
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEA 131
LSEAKV+KI EA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AITE
Sbjct: 67 LSEAKVDKIKEAVNKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITET 126
Query: 132 FGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV 191
FGEFR+GKTQL+HTLCV QLP GKV +IDTE TFRPDR+ IA+RF +D AV
Sbjct: 127 FGEFRTGKTQLSHTLCVTAQLPGTDGYTGGKVIFIDTENTFRPDRLRDIADRFSVDHDAV 186
Query: 192 LDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQ 249
LDN++YARAYT EHQ LL +AAK EE F+LL++DS++ALFRVDF+GRGELA+RQQ
Sbjct: 187 LDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLVIDSIMALFRVDFSGRGELAERQQ 246
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFR 308
KL QML+RL KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+ R
Sbjct: 247 KLAQMLARLQKISEEYNVAVFVTNQMTADPGAAMSFQADPKKPIGGHILAHASTTRISLR 306
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+ K++D+P++PE EA +F+ IT GGI+DAK+
Sbjct: 307 KGRGELRIAKIYDSPDMPENEA-TFA-------ITAGGISDAKE 342
>UNIPROTKB|F1N1D2 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007286 "spermatid development" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0000794 "condensed nuclear
chromosome" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0007286 GO:GO:0003677 GO:GO:0001541 GO:GO:0000794
GO:GO:0001556 GO:GO:0000781 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0007141 GO:GO:0000239 GO:GO:0008094 OMA:FFQDIDL
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
EMBL:DAAA02014664 IPI:IPI00691200 Ensembl:ENSBTAT00000007794
Uniprot:F1N1D2
Length = 339
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 201/347 (57%), Positives = 256/347 (73%)
Query: 9 EQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTG 68
++ Q+ L E D++E LF+ ID L GIN D+KKL+ GI T G+ M T++ L
Sbjct: 2 KEDQVVLEEPGFQDEDESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCN 61
Query: 69 IKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAI 128
+KGLSEAKV+KI EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AI
Sbjct: 62 VKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAI 121
Query: 129 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP 188
TEAFGEFR+GKTQL+HTLCV QLP G +G + +IDTE TFRPDR+ IA+RF +D
Sbjct: 122 TEAFGEFRTGKTQLSHTLCVTAQLP-GAGGYSGGIIFIDTENTFRPDRLRDIADRFNVDH 180
Query: 189 GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELAD 246
AVLDN++YARAYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+
Sbjct: 181 NAVLDNVLYARAYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAE 240
Query: 247 RQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRL 305
RQQKL QMLSRL KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+
Sbjct: 241 RQQKLAQMLSRLQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRI 300
Query: 306 MFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RKG+GE R+ K++D+P +PE EA +F+ IT GGI DAK+
Sbjct: 301 SLRKGRGELRIAKIYDSPEMPENEA-TFA-------ITAGGIGDAKE 339
>UNIPROTKB|Q14565 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000781 "chromosome, telomeric
region" evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005694 "chromosome" evidence=ISS] [GO:0007126
"meiosis" evidence=TAS] [GO:0007292 "female gamete generation"
evidence=TAS] [GO:0007283 "spermatogenesis" evidence=TAS]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0007286
GO:GO:0003677 GO:GO:0007283 Reactome:REACT_111183 GO:GO:0001541
GO:GO:0000794 GO:GO:0001556 GO:GO:0000781 GO:GO:0007292
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 EMBL:D63882 EMBL:D64108
EMBL:CR456486 EMBL:AK292617 EMBL:AY520538 EMBL:AL022320
EMBL:BC125163 EMBL:BC125164 IPI:IPI00031512 PIR:S62354
RefSeq:NP_008999.2 UniGene:Hs.339396 PDB:1V5W PDB:2ZJB PDBsum:1V5W
PDBsum:2ZJB ProteinModelPortal:Q14565 SMR:Q14565 DIP:DIP-24192N
IntAct:Q14565 MINT:MINT-3029876 STRING:Q14565 PhosphoSite:Q14565
DMDM:13878923 PaxDb:Q14565 PRIDE:Q14565 DNASU:11144
Ensembl:ENST00000216024 GeneID:11144 KEGG:hsa:11144 UCSC:uc003avz.1
CTD:11144 GeneCards:GC22M038914 HGNC:HGNC:2927 HPA:CAB015397
HPA:HPA001232 MIM:602721 neXtProt:NX_Q14565 PharmGKB:PA27377
HOVERGEN:HBG001504 InParanoid:Q14565 OrthoDB:EOG4F7NKC
PhylomeDB:Q14565 EvolutionaryTrace:Q14565 GenomeRNAi:11144
NextBio:42364 ArrayExpress:Q14565 Bgee:Q14565 CleanEx:HS_DMC1
Genevestigator:Q14565 GermOnline:ENSG00000100206 Uniprot:Q14565
Length = 340
Score = 974 (347.9 bits), Expect = 4.5e-98, P = 4.5e-98
Identities = 201/336 (59%), Positives = 251/336 (74%)
Query: 22 DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKIC 81
D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KGLSEAKV+KI
Sbjct: 15 DEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIK 74
Query: 82 EAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQ 141
EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AITEAFGEFR+GKTQ
Sbjct: 75 EAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQ 134
Query: 142 LAHTLCVCTQLPTNMRGG--NGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR 199
L+HTLCV QLP GG GK+ +IDTE TFRPDR+ IA+RF +D AVLDN++YAR
Sbjct: 135 LSHTLCVTAQLPG--AGGYPGGKIIFIDTENTFRPDRLRDIADRFNVDHDAVLDNVLYAR 192
Query: 200 AYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSR 257
AYT EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQKL QMLSR
Sbjct: 193 AYTSEHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSR 252
Query: 258 LTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRV 316
L KISEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+ RKG+GE R+
Sbjct: 253 LQKISEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRI 312
Query: 317 CKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
K++D+P +PE EA +F+ IT GGI DAK+
Sbjct: 313 AKIYDSPEMPENEA-TFA-------ITAGGIGDAKE 340
>UNIPROTKB|Q9GRA3 [details] [associations]
symbol:CnDmc1 "DMC1 homologue CnDMC1" species:6087 "Hydra
vulgaris" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AB047581 ProteinModelPortal:Q9GRA3 SMR:Q9GRA3 Uniprot:Q9GRA3
Length = 331
Score = 913 (326.5 bits), Expect = 1.3e-91, P = 1.3e-91
Identities = 188/336 (55%), Positives = 245/336 (72%)
Query: 20 DIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEK 79
+++++E F+ ID L S GIN D+KKL+ GI T G+ M TK+ L IKG+SEAKV+K
Sbjct: 4 ELEEDELFFQDIDVLQSHGINVADIKKLKSVGICTVKGIQMTTKRKLLQIKGISEAKVDK 63
Query: 80 ICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGK 139
I EA K + G+ T + RK +I+TGS LD+LLGGGIE+ +ITEAFGEFR+GK
Sbjct: 64 IKEAVAKCCSSGFFTALEYSEIRKQCFRISTGSMELDKLLGGGIESMSITEAFGEFRTGK 123
Query: 140 TQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR 199
TQ++HTLCV QLP GKV +IDTE TFRP+R+ IA+RF +D A+L NI++ R
Sbjct: 124 TQISHTLCVTAQLPGPNNYPGGKVMFIDTENTFRPNRLRSIADRFNLDHEAMLGNIVFCR 183
Query: 200 AYTYEHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSR 257
AYT E Q+ +L ++AK EE F+LLI+DS++ALFRVD++GRGELADRQQKLGQMLS+
Sbjct: 184 AYTSEQQFEVLDMVSAKFHEEAGVFKLLIIDSIMALFRVDYSGRGELADRQQKLGQMLSK 243
Query: 258 LTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRV 316
L KISEE+NVAV++TNQ+ ADPG + F SDPKKP GGH+LAHA T R+ RKG+GE R+
Sbjct: 244 LQKISEEYNVAVWITNQMTADPGATMSFQSDPKKPIGGHILAHASTTRISLRKGRGELRI 303
Query: 317 CKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
K++D+P+LPE EA +Y IT GI DAK+
Sbjct: 304 AKIYDSPDLPECEA---TY-----AITNEGITDAKE 331
>DICTYBASE|DDB_G0273611 [details] [associations]
symbol:rad51-2 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 173/323 (53%), Positives = 231/323 (71%)
Query: 9 EQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTG 68
E Q Q E E+ ++EE+ + +I+KL GINA D+KKLQ+ G+ T + TKK LTG
Sbjct: 15 ENEQQQ--EEEEEEEEEESYLSINKLEGNGINAADLKKLQEQGLNTVQAVAFTTKKTLTG 72
Query: 69 IKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAI 128
IKG+SE K +K+ A+K+V G+ T +D R +I+ITTGS+ D LL GGIE+G+I
Sbjct: 73 IKGISEQKADKLLAEAKKLVFMGFRTATDINKARAEIIQITTGSKEFDSLLDGGIESGSI 132
Query: 129 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP 188
TE FGEFR+GKTQ+ HTLCV QL + GG G+ YIDTEGTFRP+R++ IAER+ ++
Sbjct: 133 TEIFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRALYIDTEGTFRPERLLAIAERYNLNG 192
Query: 189 GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQ 248
VLDN+ YARAY +HQ LL+ +A MSE + LLIVDS AL+R D+ GRGELADRQ
Sbjct: 193 EHVLDNVSYARAYNSDHQLELLVQASAMMSESRYALLIVDSATALYRTDYAGRGELADRQ 252
Query: 249 QKLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLM 306
+ L + L L ++++EF VAV +TNQV+A D GG+F DPKKP GGH++AH+ T RL
Sbjct: 253 KHLARFLRTLQRLADEFGVAVVITNQVVASVDGAGGMFNPDPKKPIGGHIMAHSSTTRLS 312
Query: 307 FRKGKGEQRVCKVFDAPNLPEAE 329
RKGKGE R+CK++D+P+LPE+E
Sbjct: 313 LRKGKGEMRICKIYDSPSLPESE 335
>DICTYBASE|DDB_G0273139 [details] [associations]
symbol:rad51-1 "putative DNA repair protein 51"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=ISS]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0006268 "DNA unwinding involved in replication" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0003697 "single-stranded
DNA binding" evidence=ISS] [GO:0003690 "double-stranded DNA
binding" evidence=ISS] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 dictyBase:DDB_G0273611
dictyBase:DDB_G0273139 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 SUPFAM:SSF47794 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 RefSeq:XP_644422.1
RefSeq:XP_644828.1 ProteinModelPortal:Q557E6 SMR:Q557E6
STRING:Q557E6 EnsemblProtists:DDB0232316 EnsemblProtists:DDB0304849
GeneID:8618930 GeneID:8619047 KEGG:ddi:DDB_G0273139
KEGG:ddi:DDB_G0273611 InParanoid:Q557E6 ProtClustDB:PTZ00035
Uniprot:Q557E6
Length = 351
Score = 885 (316.6 bits), Expect = 1.2e-88, P = 1.2e-88
Identities = 173/323 (53%), Positives = 231/323 (71%)
Query: 9 EQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTG 68
E Q Q E E+ ++EE+ + +I+KL GINA D+KKLQ+ G+ T + TKK LTG
Sbjct: 15 ENEQQQ--EEEEEEEEEESYLSINKLEGNGINAADLKKLQEQGLNTVQAVAFTTKKTLTG 72
Query: 69 IKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAI 128
IKG+SE K +K+ A+K+V G+ T +D R +I+ITTGS+ D LL GGIE+G+I
Sbjct: 73 IKGISEQKADKLLAEAKKLVFMGFRTATDINKARAEIIQITTGSKEFDSLLDGGIESGSI 132
Query: 129 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP 188
TE FGEFR+GKTQ+ HTLCV QL + GG G+ YIDTEGTFRP+R++ IAER+ ++
Sbjct: 133 TEIFGEFRTGKTQICHTLCVTCQLGYSQGGGEGRALYIDTEGTFRPERLLAIAERYNLNG 192
Query: 189 GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQ 248
VLDN+ YARAY +HQ LL+ +A MSE + LLIVDS AL+R D+ GRGELADRQ
Sbjct: 193 EHVLDNVSYARAYNSDHQLELLVQASAMMSESRYALLIVDSATALYRTDYAGRGELADRQ 252
Query: 249 QKLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLM 306
+ L + L L ++++EF VAV +TNQV+A D GG+F DPKKP GGH++AH+ T RL
Sbjct: 253 KHLARFLRTLQRLADEFGVAVVITNQVVASVDGAGGMFNPDPKKPIGGHIMAHSSTTRLS 312
Query: 307 FRKGKGEQRVCKVFDAPNLPEAE 329
RKGKGE R+CK++D+P+LPE+E
Sbjct: 313 LRKGKGEMRICKIYDSPSLPESE 335
>POMBASE|SPAC8E11.03c [details] [associations]
symbol:dmc1 "RecA family ATPase Dmc1" species:4896
"Schizosaccharomyces pombe" [GO:0000150 "recombinase activity"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=ISM;IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IMP]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 PomBase:SPAC8E11.03c
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0006281 GO:GO:0051260 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 EMBL:AB008545 EMBL:D64035
PIR:T39157 PIR:T51302 RefSeq:NP_594166.1 ProteinModelPortal:O42634
DIP:DIP-29236N IntAct:O42634 STRING:O42634
EnsemblFungi:SPAC8E11.03c.1 GeneID:2542106 KEGG:spo:SPAC8E11.03c
OrthoDB:EOG43XZC8 NextBio:20803178 GO:GO:0006311 GO:GO:0000709
Uniprot:O42634
Length = 332
Score = 884 (316.2 bits), Expect = 1.6e-88, P = 1.6e-88
Identities = 184/333 (55%), Positives = 237/333 (71%)
Query: 19 EDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVE 78
E DDE+ +F I+ L + GI D+ KL+ AG+ T G+ M TK+ L IKG SEAKV+
Sbjct: 6 EGNDDEQMIFSDIEDLTAHGIGMTDIIKLKQAGVCTVQGVHMSTKRFLLKIKGFSEAKVD 65
Query: 79 KICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSG 138
K+ EAA K+ + T + RK V I+TGS+AL+ +LGGGI++ +ITE FGEFR G
Sbjct: 66 KLKEAASKMCPANFSTAMEISQNRKKVWSISTGSEALNGILGGGIQSMSITEVFGEFRCG 125
Query: 139 KTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYA 198
KTQ++HTLCV QLP +M G GKVA+IDTEGTFRPDRI IAERFG+D ++NII +
Sbjct: 126 KTQMSHTLCVTAQLPRDMGGAEGKVAFIDTEGTFRPDRIKAIAERFGVDADQAMENIIVS 185
Query: 199 RAYTYEHQYNLLLGLAAKMSEE-PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSR 257
RAY E Q + L +E+ +RLLIVDS++ALFRVD++GRGEL++RQQKL ML+R
Sbjct: 186 RAYNSEQQMEYITKLGTIFAEDGQYRLLIVDSIMALFRVDYSGRGELSERQQKLNIMLAR 245
Query: 258 LTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRV 316
L ISEEFNVAV++TNQV ADPG + F S+ +KP GGHV+AHA RL+ RKG+GE+RV
Sbjct: 246 LNHISEEFNVAVFVTNQVQADPGAAMMFASNDRKPVGGHVMAHASATRLLLRKGRGEERV 305
Query: 317 CKVFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
K+ D+P++PEAE SY ITPGGIAD
Sbjct: 306 AKLNDSPDMPEAEC---SY-----VITPGGIAD 330
>UNIPROTKB|Q9C0P6 [details] [associations]
symbol:dmc1 "Putative DMC1 protein" species:5322 "Pleurotus
ostreatus" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150 HSSP:Q06609
EMBL:AJ311528 EMBL:AJ308557 ProteinModelPortal:Q9C0P6
Uniprot:Q9C0P6
Length = 347
Score = 871 (311.7 bits), Expect = 3.7e-87, P = 3.7e-87
Identities = 179/331 (54%), Positives = 242/331 (73%)
Query: 22 DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKIC 81
+DE F+ +D+L GIN D+ KL+ A I+T +G+ M T++ L IKG+SEAKVEKI
Sbjct: 24 EDEVPNFDTVDELQQHGINVQDIVKLKSAAIHTVSGVNMTTRRQLLKIKGMSEAKVEKIK 83
Query: 82 EAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQ 141
EAA KI+ + TG + +RK V I+TGS+ +D +LGGGI + +++E +GEFR+GKTQ
Sbjct: 84 EAAHKILGSSFATGIEIQEKRKRVNTISTGSKNVDVILGGGIMSQSVSEVYGEFRTGKTQ 143
Query: 142 LAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAY 201
LAHT+ V QLP ++ G +GKVAYIDTEGTFRPDRI IAERFG+D L+NI+YARA+
Sbjct: 144 LAHTMSVVAQLPPDLGGASGKVAYIDTEGTFRPDRIRSIAERFGVDGSLALENILYARAF 203
Query: 202 TYEHQYNLLLGLAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTK 260
EHQ L+ + + +E+ FRLLIVDS++ALFRVD++GRGEL++RQQKL QMLSRLTK
Sbjct: 204 NSEHQMELINECSMRFAEDKDFRLLIVDSIMALFRVDYSGRGELSERQQKLAQMLSRLTK 263
Query: 261 ISEEFNVAVYMTNQVIADPGGGV-FISDPK-KPAGGHVLAHAVTIRLMFRKGKGEQRVCK 318
+SEE+N+AV +TNQV +DPG + F++ KP GGH+L+HA + RL RKG+ E+RV K
Sbjct: 264 LSEEYNIAVLLTNQVQSDPGATMTFVAGGALKPIGGHILSHASSTRLFLRKGRAEERVAK 323
Query: 319 VFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
+ D+P+ PE+EA SY K+ GG AD
Sbjct: 324 LVDSPDRPESEA---SY-----KLDEGGWAD 346
>UNIPROTKB|Q6FKF0 [details] [associations]
symbol:CAGL0L12100g "Similar to uniprot|P25453
Saccharomyces cerevisiae YER179w meiosis-specific protein"
species:284593 "Candida glabrata CBS 138" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR380958
GenomeReviews:CR380958_GR KO:K10872 OMA:FFQDIDL InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
RefSeq:XP_449294.1 ProteinModelPortal:Q6FKF0 GeneID:2890684
KEGG:cgr:CAGL0L12100g Uniprot:Q6FKF0
Length = 334
Score = 868 (310.6 bits), Expect = 7.7e-87, P = 7.7e-87
Identities = 177/325 (54%), Positives = 236/325 (72%)
Query: 30 AIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVN 89
AID+L + GINA D++KL+ +GIYT N + T+++L IKGLSE KVEKI EAA K+V
Sbjct: 18 AIDELQNYGINASDIQKLKGSGIYTVNTVQSTTRRNLVKIKGLSEVKVEKIKEAANKLVK 77
Query: 90 FGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
G++ + + R+ VI I+TGS+ LD +LGGGI T +ITE FGEFR GKTQ++HTLCV
Sbjct: 78 VGFVPATVQMDLRQKVISISTGSKQLDSVLGGGIMTMSITEVFGEFRCGKTQMSHTLCVT 137
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNL 209
QLP +M GG GKVA+IDTEGTFRP+RI IAER+ +DP + L+NI YARA EHQ L
Sbjct: 138 AQLPKSMGGGEGKVAFIDTEGTFRPERIKQIAERYDLDPDSCLENITYARALNSEHQMEL 197
Query: 210 LLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAV 269
+ L ++S + L+IVDS++A FRVD+ GRGEL +RQQKL Q L +L +++EEFN+AV
Sbjct: 198 VEQLGEELSSGSYTLIIVDSIMANFRVDYCGRGELNERQQKLNQHLFKLNRLAEEFNLAV 257
Query: 270 YMTNQVIADPGGG-VFIS-DPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPE 327
+MTNQV +DPG +F S D +KP GGHVLAHA R++ RKG+G++RV K+ D+P++PE
Sbjct: 258 FMTNQVQSDPGASALFASADGRKPVGGHVLAHASATRILLRKGRGDERVAKLQDSPDMPE 317
Query: 328 AEAISFSYHIILIKITPGGIADAKD 352
E + Y I GGIAD+ +
Sbjct: 318 RECV---Y-----VIGEGGIADSSE 334
>UNIPROTKB|Q06609 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0043142 "single-stranded
DNA-dependent ATPase activity" evidence=IDA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0006268 "DNA unwinding involved in replication" evidence=IDA]
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0016605 "PML body" evidence=IDA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=TAS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005524 "ATP
binding" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] [GO:0042802 "identical protein binding" evidence=IPI]
Reactome:REACT_216 InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_111183 GO:GO:0003690 GO:GO:0003697
GO:GO:0000794 MIM:114480 GO:GO:0006312
Pathway_Interaction_DB:bard1pathway GO:GO:0007131 Orphanet:145
SUPFAM:SSF47794 GO:GO:0000800 PDB:1N0W PDBsum:1N0W EMBL:AC022405
EMBL:CH471125 EMBL:AC012476 Orphanet:238722 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142
GO:GO:0006268 KO:K04482 GO:GO:0051106 GO:GO:0000730 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13804 EMBL:D14134 EMBL:AF165094
EMBL:AF165088 EMBL:AF165089 EMBL:AF165090 EMBL:AF165091
EMBL:AF165092 EMBL:AF165093 EMBL:AF233744 EMBL:AF233740
EMBL:AF233741 EMBL:AF233742 EMBL:AF236021 EMBL:AF233743
EMBL:EU362635 EMBL:AY196785 EMBL:AK131299 EMBL:AK291969
EMBL:AK313503 EMBL:CR536559 EMBL:BC001459 IPI:IPI00032201
IPI:IPI00220649 IPI:IPI00553199 IPI:IPI01010370 PIR:I58295
RefSeq:NP_001157741.1 RefSeq:NP_001157742.1 RefSeq:NP_002866.2
RefSeq:NP_597994.3 UniGene:Hs.631709 PDB:1B22 PDBsum:1B22
ProteinModelPortal:Q06609 SMR:Q06609 DIP:DIP-462N IntAct:Q06609
MINT:MINT-1374477 STRING:Q06609 PhosphoSite:Q06609 DMDM:548663
PaxDb:Q06609 PRIDE:Q06609 DNASU:5888 Ensembl:ENST00000267868
Ensembl:ENST00000382643 Ensembl:ENST00000423169
Ensembl:ENST00000532743 Ensembl:ENST00000557850 GeneID:5888
KEGG:hsa:5888 UCSC:uc001zmi.4 UCSC:uc010bbw.3 GeneCards:GC15P040987
HGNC:HGNC:9817 HPA:CAB010381 MIM:179617 MIM:614508
neXtProt:NX_Q06609 PharmGKB:PA34176 PhylomeDB:Q06609
BindingDB:Q06609 ChiTaRS:RAD51 EvolutionaryTrace:Q06609
GenomeRNAi:5888 NextBio:22896 PMAP-CutDB:Q06609 ArrayExpress:Q06609
Bgee:Q06609 CleanEx:HS_RAD51 Genevestigator:Q06609
GermOnline:ENSG00000051180 Uniprot:Q06609
Length = 339
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 177/344 (51%), Positives = 234/344 (68%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YARA+ +HQ LL +A M E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 304 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKD 339
>UNIPROTKB|B0M1M6 [details] [associations]
symbol:pigRAD51 "Rad51" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051106
"positive regulation of DNA ligation" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0006268 "DNA
unwinding involved in replication" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:CU633257 EMBL:EU302125 EMBL:AB355632
RefSeq:NP_001116653.1 UniGene:Ssc.22664 SMR:B0M1M6 STRING:B0M1M6
Ensembl:ENSSSCT00000005265 GeneID:100141309 KEGG:ssc:100141309
Uniprot:B0M1M6
Length = 339
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 176/344 (51%), Positives = 234/344 (68%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLESNADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YARA+ +HQ LL +A M E + LLI+DS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARAFNTDHQTQLLYQASAMMVESRYALLIIDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 304 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKD 339
>SGD|S000000981 [details] [associations]
symbol:DMC1 "Meiosis-specific protein required for repair of
double-strand breaks" species:4932 "Saccharomyces cerevisiae"
[GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0007126
"meiosis" evidence=IEA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0000709 "meiotic joint molecule formation"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0030435
"sporulation resulting in formation of a cellular spore"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011940
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 SGD:S000000981 GO:GO:0005524
GO:GO:0016887 GO:GO:0030435 EMBL:BK006939 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:U18922 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GeneTree:ENSGT00550000075091
GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709 EMBL:M87549
EMBL:D10865 PIR:A38214 RefSeq:NP_011106.1 ProteinModelPortal:P25453
SMR:P25453 DIP:DIP-110N IntAct:P25453 MINT:MINT-387175
STRING:P25453 PeptideAtlas:P25453 EnsemblFungi:YER179W
GeneID:856926 KEGG:sce:YER179W CYGD:YER179w NextBio:983398
Genevestigator:P25453 GermOnline:YER179W Uniprot:P25453
Length = 334
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 171/314 (54%), Positives = 231/314 (73%)
Query: 20 DIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEK 79
D D +++ ++D+L + GINA D++KL+ GIYT N ++ T++HL IKGLSE KVEK
Sbjct: 9 DSDTAKNIL-SVDELQNYGINASDLQKLKSGGIYTVNTVLSTTRRHLCKIKGLSEVKVEK 67
Query: 80 ICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGK 139
I EAA KI+ G+I + L R+ V ++TGS+ LD +LGGGI T +ITE FGEFR GK
Sbjct: 68 IKEAAGKIIQVGFIPATVQLDIRQRVYSLSTGSKQLDSILGGGIMTMSITEVFGEFRCGK 127
Query: 140 TQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR 199
TQ++HTLCV TQLP M GG GKVAYIDTEGTFRP+RI IAE + +DP + L N+ YAR
Sbjct: 128 TQMSHTLCVTTQLPREMGGGEGKVAYIDTEGTFRPERIKQIAEGYELDPESCLANVSYAR 187
Query: 200 AYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLT 259
A EHQ L+ L ++S +RL++VDS++A FRVD+ GRGEL++RQQKL Q L +L
Sbjct: 188 ALNSEHQMELVEQLGEELSSGDYRLIVVDSIMANFRVDYCGRGELSERQQKLNQHLFKLN 247
Query: 260 KISEEFNVAVYMTNQVIADPGGG-VFIS-DPKKPAGGHVLAHAVTIRLMFRKGKGEQRVC 317
+++EEFNVAV++TNQV +DPG +F S D +KP GGHVLAHA R++ RKG+G++RV
Sbjct: 248 RLAEEFNVAVFLTNQVQSDPGASALFASADGRKPIGGHVLAHASATRILLRKGRGDERVA 307
Query: 318 KVFDAPNLPEAEAI 331
K+ D+P++PE E +
Sbjct: 308 KLQDSPDMPEKECV 321
>UNIPROTKB|Q2KJ94 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] [GO:0005759 "mitochondrial
matrix" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0016605 GO:GO:0051260
GO:GO:0003690 GO:GO:0003697 GO:GO:0000724 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:BC105458
IPI:IPI00686332 RefSeq:NP_001039644.1 UniGene:Bt.36197 HSSP:O73948
ProteinModelPortal:Q2KJ94 SMR:Q2KJ94 STRING:Q2KJ94 PRIDE:Q2KJ94
Ensembl:ENSBTAT00000003788 GeneID:514749 KEGG:bta:514749 CTD:5888
InParanoid:Q2KJ94 OrthoDB:EOG47H5QB NextBio:20871491 Uniprot:Q2KJ94
Length = 339
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 176/344 (51%), Positives = 233/344 (67%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 304 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKD 339
>UNIPROTKB|Q8MKI8 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9615 "Canis lupus familiaris" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0006268 "DNA
unwinding involved in replication" evidence=ISS] [GO:0007126
"meiosis" evidence=ISS] [GO:0000794 "condensed nuclear chromosome"
evidence=ISS] [GO:0000793 "condensed chromosome" evidence=ISS]
[GO:0005759 "mitochondrial matrix" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0051106 "positive
regulation of DNA ligation" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0016605
"PML body" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0007126 GO:GO:0048471 GO:GO:0005759
GO:GO:0003684 GO:GO:0016605 GO:GO:0051260 GO:GO:0003690
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AB043896 RefSeq:NP_001003043.1
UniGene:Cfa.85 ProteinModelPortal:Q8MKI8 SMR:Q8MKI8 STRING:Q8MKI8
Ensembl:ENSCAFT00000014658 GeneID:403568 KEGG:cfa:403568
InParanoid:Q8MKI8 NextBio:20817076 Uniprot:Q8MKI8
Length = 339
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 176/344 (51%), Positives = 233/344 (67%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELISI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 304 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKD 339
>UNIPROTKB|Q74ZU7 [details] [associations]
symbol:AGR101C "AGR101Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0003690 "double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0006281 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 EMBL:AE016820 GenomeReviews:AE016820_GR
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 GO:GO:0000709 RefSeq:NP_986767.1 HSSP:Q06609
ProteinModelPortal:Q74ZU7 STRING:Q74ZU7 EnsemblFungi:AAS54591
GeneID:4623069 KEGG:ago:AGOS_AGR101C PhylomeDB:Q74ZU7
Uniprot:Q74ZU7
Length = 333
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 176/325 (54%), Positives = 235/325 (72%)
Query: 30 AIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVN 89
++D+L + GINA D++KL+ +GI++ N ++ T+++L IKG SE KVEK+ EAA KI+
Sbjct: 17 SVDELQNYGINASDLQKLKASGIFSVNTVLSTTRRNLLKIKGFSEVKVEKVKEAAGKIIQ 76
Query: 90 FGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
G+I + L RK V I+TGS+ LD +LGGG+ T +ITE FGEFR GKTQ++HTLCV
Sbjct: 77 VGFIPATVQLDIRKRVFAISTGSKQLDSILGGGVMTMSITEVFGEFRCGKTQMSHTLCVT 136
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNL 209
QLP M GG GKVAYIDTEGTFRP+RI IA R+ +DP A L+N+ YARA EHQ L
Sbjct: 137 AQLPREMGGGEGKVAYIDTEGTFRPERIKQIAARYDLDPDACLENVSYARALNSEHQMEL 196
Query: 210 LLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAV 269
+ L +++ +RLLIVDS++A FRVD+ GRGEL +RQQKL Q LSRL +++EE+NVAV
Sbjct: 197 VEQLGQELASGDYRLLIVDSIMANFRVDYCGRGELNERQQKLNQHLSRLNRVAEEYNVAV 256
Query: 270 YMTNQVIADPGGG-VFIS-DPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPE 327
+MTNQV +DPG +F S D +KP GGHVLAHA R++ RKG+GE+RV K+ D+P++PE
Sbjct: 257 FMTNQVQSDPGASALFASADGRKPVGGHVLAHASATRILLRKGRGEERVAKLQDSPDMPE 316
Query: 328 AEAISFSYHIILIKITPGGIADAKD 352
E + ++I K GI DA D
Sbjct: 317 KECV----YVIGEK----GITDADD 333
>MGI|MGI:97890 [details] [associations]
symbol:Rad51 "RAD51 homolog" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=ISO;IDA;IMP] [GO:0000793 "condensed chromosome"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=TAS]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=TAS] [GO:0007126 "meiosis" evidence=IDA]
[GO:0007131 "reciprocal meiotic recombination" evidence=TAS]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016605 "PML
body" evidence=ISO] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=ISO] [GO:0043142 "single-stranded DNA-dependent ATPase
activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 MGI:MGI:97890 GO:GO:0005524 GO:GO:0048471
GO:GO:0005654 GO:GO:0005759 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 Reactome:REACT_120463 GO:GO:0003690 GO:GO:0003697
GO:GO:0000724 GO:GO:0007131 Reactome:REACT_27235 SUPFAM:SSF47794
GO:GO:0000800 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268
KO:K04482 GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:D13473 EMBL:D13803 EMBL:AK011242
EMBL:AK076468 EMBL:AK151157 EMBL:AK151177 EMBL:BC027384
IPI:IPI00118524 PIR:A48221 RefSeq:NP_035364.1 UniGene:Mm.330492
ProteinModelPortal:Q08297 SMR:Q08297 IntAct:Q08297 MINT:MINT-205669
STRING:Q08297 PhosphoSite:Q08297 PaxDb:Q08297 PRIDE:Q08297
Ensembl:ENSMUST00000028795 GeneID:19361 KEGG:mmu:19361
InParanoid:Q08297 NextBio:296421 Bgee:Q08297 CleanEx:MM_RAD51
Genevestigator:Q08297 GermOnline:ENSMUSG00000027323 Uniprot:Q08297
Length = 339
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 176/344 (51%), Positives = 233/344 (67%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEASADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGYHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 304 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKD 339
>UNIPROTKB|G1K2Z8 [details] [associations]
symbol:RAD51 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006268
"DNA unwinding involved in replication" evidence=IEA] [GO:0007126
"meiosis" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0043142
"single-stranded DNA-dependent ATPase activity" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0051106 "positive regulation of DNA ligation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 EMBL:AADN02040043
ProteinModelPortal:G1K2Z8 Ensembl:ENSGALT00000007192 Uniprot:G1K2Z8
Length = 337
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 176/344 (51%), Positives = 233/344 (67%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+Q D EE+ F E I +L GINA DVKKL++AG +T + KK L I
Sbjct: 2 QVQFEASTDTSAEEESFGPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNI 61
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 62 KGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 121
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQL HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 122 ELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 181
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YAR + +HQ LL +A M+E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 182 DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQM 241
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 242 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 301
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAK+
Sbjct: 302 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKE 337
>UNIPROTKB|P37383 [details] [associations]
symbol:RAD51A "DNA repair protein RAD51 homolog 1"
species:9031 "Gallus gallus" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000793
"condensed chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0006268 "DNA unwinding involved in
replication" evidence=ISS] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043142 "single-stranded DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0051106 "positive regulation of DNA ligation"
evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0005634
"nucleus" evidence=ISS] [GO:0007126 "meiosis" evidence=ISS]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006302 "double-strand break repair"
evidence=TAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0007126
GO:GO:0048471 GO:GO:0005654 GO:GO:0003684 GO:GO:0016605
GO:GO:0051260 GO:GO:0003690 GO:GO:0003697 GO:GO:0000724
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0000800 Reactome:REACT_115612
eggNOG:COG0468 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0043142 GO:GO:0006268 KO:K04482
GO:GO:0051106 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888 EMBL:L09655
EMBL:S59426 IPI:IPI00593131 PIR:S35642 RefSeq:NP_990504.1
UniGene:Gga.2303 ProteinModelPortal:P37383 SMR:P37383 STRING:P37383
Ensembl:ENSGALT00000032744 GeneID:396086 KEGG:gga:396086
InParanoid:P37383 NextBio:20816144 Uniprot:P37383
Length = 339
Score = 859 (307.4 bits), Expect = 6.9e-86, P = 6.9e-86
Identities = 176/344 (51%), Positives = 233/344 (67%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+Q D EE+ F E I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QVQFEASTDTSAEEESFGPEPISRLEQCGINANDVKKLEEAGYHTVESVAHAPKKELLNI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQL HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 ELFGEFRTGKTQLCHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YAR + +HQ LL +A M+E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARGFNTDHQTQLLYQASAMMAESRYALLIVDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAK+
Sbjct: 304 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKE 339
>UNIPROTKB|P70099 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:10029 "Cricetulus griseus" [GO:0000793 "condensed
chromosome" evidence=ISS] [GO:0000794 "condensed nuclear
chromosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0007126 "meiosis"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0007126 GO:GO:0048471
GO:GO:0005759 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
HOVERGEN:HBG001504 GO:GO:0006268 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:Y08202 RefSeq:NP_001233686.1
ProteinModelPortal:P70099 SMR:P70099 GeneID:100689324
Uniprot:P70099
Length = 339
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 176/344 (51%), Positives = 233/344 (67%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GI+A DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGISANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFTADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CKV+D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 304 KGRGETRICKVYDSPCLPEAEAM-FA-------INADGVGDAKD 339
>UNIPROTKB|Q9P972 [details] [associations]
symbol:LIM15/DMC1 homolog "LIM15/DMC1 homolog protein"
species:5346 "Coprinopsis cinerea" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
HSSP:Q06609 EMBL:AB036801 ProteinModelPortal:Q9P972 Uniprot:Q9P972
Length = 345
Score = 855 (306.0 bits), Expect = 1.8e-85, P = 1.8e-85
Identities = 177/331 (53%), Positives = 240/331 (72%)
Query: 22 DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKIC 81
D++E F+++D+L GIN D+ K A I T +G++M T++ L IKG+SEAKVEKI
Sbjct: 24 DEDEVAFDSVDELQQHGINVQDITK--SAAINTVSGVIMTTRRQLLKIKGMSEAKVEKIK 81
Query: 82 EAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQ 141
EAA+KI + TG + +RK V+ I+TGS+ +D +LGGG+ + +ITE +GE+R+GKTQ
Sbjct: 82 EAAQKIHGSSFATGVEIQDKRKRVLVISTGSKLVDGILGGGVMSQSITEVYGEYRTGKTQ 141
Query: 142 LAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAY 201
LAHT+ V QLP G GKVAYIDTEGTFRPDRI IA+RFG+D L+NI+YARA+
Sbjct: 142 LAHTMSVVAQLPPEYGGAAGKVAYIDTEGTFRPDRIRAIADRFGVDGTMALENILYARAF 201
Query: 202 TYEHQYNLLLGLAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTK 260
EHQ L+ +A+ +E+ FRLLI+DS++ALFRVD++GRGEL++RQQKL QMLS+LTK
Sbjct: 202 NSEHQMELINECSARFAEDKDFRLLIIDSIMALFRVDYSGRGELSERQQKLAQMLSKLTK 261
Query: 261 ISEEFNVAVYMTNQVIADPGGGV-FISDPK-KPAGGHVLAHAVTIRLMFRKGKGEQRVCK 318
+SEEFN+AV MTNQV +DPG + F++ KP GGH+L+HA R+ RKG+ E+RV K
Sbjct: 262 LSEEFNIAVLMTNQVQSDPGATMTFVAGGALKPIGGHILSHASATRIFLRKGRAEERVAK 321
Query: 319 VFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
+ D+P+ PE+EA SY K+ GG AD
Sbjct: 322 LVDSPDRPESEA---SY-----KLDEGGWAD 344
>UNIPROTKB|O77507 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9986 "Oryctolagus cuniculus" [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006268 "DNA unwinding
involved in replication" evidence=ISS] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISS] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0005759 GO:GO:0003684
GO:GO:0006281 GO:GO:0006310 GO:GO:0003690 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOVERGEN:HBG001504 GO:GO:0006268
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 CTD:5888
OrthoDB:EOG47H5QB EMBL:AF017729 RefSeq:NP_001075493.1
UniGene:Ocu.2212 ProteinModelPortal:O77507 SMR:O77507 STRING:O77507
GeneID:100008661 Uniprot:O77507
Length = 339
Score = 854 (305.7 bits), Expect = 2.4e-85, P = 2.4e-85
Identities = 174/344 (50%), Positives = 232/344 (67%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + + +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPVSRLEQCGINANDVKKLEEAGFHTEEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILTEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLSGS 183
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGEL+ RQ
Sbjct: 184 DVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSARQM 243
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFR 308
L + L L ++++EF V V +TNQV+A G +F +DPKKP GG+++AHA T RL R
Sbjct: 244 HLARFLRMLLRLADEFGVTVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTRLYLR 303
Query: 309 KGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
KG+GE R+CK++D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 304 KGRGETRICKIYDSPCLPEAEAM-FA-------INADGVGDAKD 339
>ZFIN|ZDB-GENE-040426-2286 [details] [associations]
symbol:rad51 "RAD51 homolog (RecA homolog, E.
coli) (S. cerevisiae)" species:7955 "Danio rerio" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0051597 "response to methylmercury" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382
ZFIN:ZDB-GENE-040426-2286 GO:GO:0005524 GO:GO:0046686 GO:GO:0003684
GO:GO:0006281 GO:GO:0051597 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 HOVERGEN:HBG001504 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 CTD:5888 EMBL:BX936455 IPI:IPI00496483
RefSeq:NP_998371.2 UniGene:Dr.1514 SMR:Q5TYR1
Ensembl:ENSDART00000060706 GeneID:406487 KEGG:dre:406487
InParanoid:Q5TYR1 NextBio:20818074 Uniprot:Q5TYR1
Length = 340
Score = 852 (305.0 bits), Expect = 3.8e-85, P = 3.8e-85
Identities = 173/339 (51%), Positives = 235/339 (69%)
Query: 16 VEREDIDDEEDLF-EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSE 74
VE E +++EE+ + + +L GI++ D+KKL+D G +T + KK L IKG+SE
Sbjct: 11 VEAE-VEEEENFGPQPVSRLEQSGISSSDIKKLEDGGFHTVEAVAYAPKKELLNIKGISE 69
Query: 75 AKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGE 134
AK +KI A K+V G+ T ++ RR +I+I+TGS+ LD+LL GGIETG+ITE FGE
Sbjct: 70 AKADKILTEAAKMVPMGFTTATEFHQRRAEIIQISTGSKELDKLLQGGIETGSITEMFGE 129
Query: 135 FRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDN 194
FR+GKTQL HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+ VLDN
Sbjct: 130 FRTGKTQLCHTLAVTCQLPIDQGGGEGKAMYIDTEGTFRPERLLAVAERYGLVGSDVLDN 189
Query: 195 IIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 254
+ YARA+ +HQ LL +A M+E + LLIVDS AL+R D++GRGEL+ RQ LG+
Sbjct: 190 VAYARAFNTDHQTQLLYQASAMMTESRYALLIVDSATALYRTDYSGRGELSARQGHLGRF 249
Query: 255 LSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGE 313
L L ++++EF VAV +TNQV+A G +F +DPKKP GG++LAHA T RL RKG+GE
Sbjct: 250 LRMLLRLADEFGVAVVITNQVVAQVDGAAMFSADPKKPIGGNILAHASTTRLYLRKGRGE 309
Query: 314 QRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
R+CK++D+P LPEAEA+ F+ I G+ DAKD
Sbjct: 310 TRICKIYDSPCLPEAEAM-FA-------INADGVGDAKD 340
>CGD|CAL0001214 [details] [associations]
symbol:RAD51 species:5476 "Candida albicans" [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030998 "linear
element" evidence=IEA] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IEA] [GO:0000150 "recombinase activity"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0044182
"filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:1900429 "negative regulation of filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0006311 "meiotic gene conversion" evidence=IEA] [GO:0000722
"telomere maintenance via recombination" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0042148 "strand
invasion" evidence=IEA] [GO:0000709 "meiotic joint molecule
formation" evidence=IEA] [GO:0030491 "heteroduplex formation"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0000711 "meiotic DNA repair synthesis" evidence=IEA]
[GO:0006200 "ATP catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 168/336 (50%), Positives = 231/336 (68%)
Query: 8 EEQSQLQLVERE---DIDDEEDLFEA---IDKLISQGINAGDVKKLQDAGIYTCNGLMMH 61
EE S Q + + + +++ED+ I++L GINA D+KKL+ G +T +
Sbjct: 13 EEGSHPQNINADAEVEAEEDEDVLNGPLLIEQLEGNGINASDIKKLKAEGFHTIESIAYT 72
Query: 62 TKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGG 121
K+HL +KG+SE K EKI A K+V G+ T S+ RR +I +TTGS+ LD LLGG
Sbjct: 73 PKRHLMTVKGISENKAEKISAEAAKLVPLGFTTASEFHSRRSELICLTTGSKQLDTLLGG 132
Query: 122 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 181
G+ETG+ITE FGEFR+GK+QL HTL V QLP +M GG GK YIDTEGTFRP+R+V IA
Sbjct: 133 GVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPNRLVSIA 192
Query: 182 ERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR 241
+R+G++P LDN+ YARAY EHQ NLL A M+E F LLIVDS+++L+R D+ GR
Sbjct: 193 QRYGLNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFSLLIVDSIMSLYRTDYAGR 252
Query: 242 GELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGG--GVFISDPKKPAGGHVLAH 299
GEL+ RQ + + + L ++++EF +AV +TNQV+A G G+F DPKKP GG+++AH
Sbjct: 253 GELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDGMSGMFNPDPKKPIGGNIIAH 312
Query: 300 AVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSY 335
+ T RL F+KG+GE R+CK++D+P LPE+E I Y
Sbjct: 313 SSTTRLSFKKGRGETRICKIYDSPCLPESECIFAIY 348
>UNIPROTKB|Q59UY8 [details] [associations]
symbol:RAD51 "Putative uncharacterized protein RAD51"
species:237561 "Candida albicans SC5314" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
"phenotypic switching" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:1900429 "negative regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP]
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 CGD:CAL0001214 GO:GO:0005524
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0044182
GO:GO:0008094 GO:GO:1900429 GO:GO:0036166 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482 EMBL:AACQ01000127
EMBL:AACQ01000126 PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239
RefSeq:XP_713440.1 RefSeq:XP_713476.1 ProteinModelPortal:Q59UY8
SMR:Q59UY8 STRING:Q59UY8 GeneID:3644908 GeneID:3644944
KEGG:cal:CaO19.11236 KEGG:cal:CaO19.3752 Uniprot:Q59UY8
Length = 361
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 168/336 (50%), Positives = 231/336 (68%)
Query: 8 EEQSQLQLVERE---DIDDEEDLFEA---IDKLISQGINAGDVKKLQDAGIYTCNGLMMH 61
EE S Q + + + +++ED+ I++L GINA D+KKL+ G +T +
Sbjct: 13 EEGSHPQNINADAEVEAEEDEDVLNGPLLIEQLEGNGINASDIKKLKAEGFHTIESIAYT 72
Query: 62 TKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGG 121
K+HL +KG+SE K EKI A K+V G+ T S+ RR +I +TTGS+ LD LLGG
Sbjct: 73 PKRHLMTVKGISENKAEKISAEAAKLVPLGFTTASEFHSRRSELICLTTGSKQLDTLLGG 132
Query: 122 GIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 181
G+ETG+ITE FGEFR+GK+QL HTL V QLP +M GG GK YIDTEGTFRP+R+V IA
Sbjct: 133 GVETGSITEVFGEFRTGKSQLCHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPNRLVSIA 192
Query: 182 ERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR 241
+R+G++P LDN+ YARAY EHQ NLL A M+E F LLIVDS+++L+R D+ GR
Sbjct: 193 QRYGLNPNDCLDNVAYARAYNAEHQLNLLNIAAEMMAESRFSLLIVDSIMSLYRTDYAGR 252
Query: 242 GELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGG--GVFISDPKKPAGGHVLAH 299
GEL+ RQ + + + L ++++EF +AV +TNQV+A G G+F DPKKP GG+++AH
Sbjct: 253 GELSARQTHVAKFMRTLQRLADEFGIAVVITNQVVAQVDGMSGMFNPDPKKPIGGNIIAH 312
Query: 300 AVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSY 335
+ T RL F+KG+GE R+CK++D+P LPE+E I Y
Sbjct: 313 SSTTRLSFKKGRGETRICKIYDSPCLPESECIFAIY 348
>SGD|S000000897 [details] [associations]
symbol:RAD51 "Strand exchange protein" species:4932
"Saccharomyces cerevisiae" [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;IDA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0000722 "telomere maintenance via
recombination" evidence=IMP] [GO:0045002 "double-strand break
repair via single-strand annealing" evidence=IMP] [GO:0030491
"heteroduplex formation" evidence=IDA] [GO:0000709 "meiotic joint
molecule formation" evidence=IMP] [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0042148 "strand invasion" evidence=IDA]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
SGD:S000000897 GO:GO:0005524 GO:GO:0003684 EMBL:BK006939
GO:GO:0003697 GO:GO:0000724 GO:GO:0000794 EMBL:U18839 GO:GO:0000722
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0000709 RefSeq:NP_011021.3
GeneID:856831 KEGG:sce:YER095W KO:K04482 EMBL:M88470
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z GO:GO:0042148 EMBL:X64270
EMBL:D10023 PIR:A44348 RefSeq:NP_011026.3 PDB:1SZP PDB:3LDA
PDBsum:1SZP PDBsum:3LDA ProteinModelPortal:P25454 SMR:P25454
DIP:DIP-195N IntAct:P25454 MINT:MINT-386096 STRING:P25454
PaxDb:P25454 PeptideAtlas:P25454 EnsemblFungi:YER095W GeneID:856837
KEGG:sce:YER100W CYGD:YER095w KO:K04554 EvolutionaryTrace:P25454
NextBio:983130 Genevestigator:P25454 GermOnline:YER095W
GO:GO:0030491 Uniprot:P25454
Length = 400
Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
Identities = 169/331 (51%), Positives = 231/331 (69%)
Query: 8 EEQSQLQLVEREDIDDEEDL--FEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKH 65
+EQ++ Q ++ DE L F I+KL GI DVKKL+++G++T + +K
Sbjct: 58 QEQAEAQGEMEDEAYDEAALGSFVPIEKLQVNGITMADVKKLRESGLHTAEAVAYAPRKD 117
Query: 66 LTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIET 125
L IKG+SEAK +K+ A ++V G++T +D +RR +I +TTGS+ LD LLGGG+ET
Sbjct: 118 LLEIKGISEAKADKLLNEAARLVPMGFVTAADFHMRRSELICLTTGSKNLDTLLGGGVET 177
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 185
G+ITE FGEFR+GK+QL HTL V Q+P ++ GG GK YIDTEGTFRP R+V IA+RFG
Sbjct: 178 GSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFG 237
Query: 186 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELA 245
+DP L+N+ YARAY +HQ LL A MSE F L++VDSV+AL+R DF+GRGEL+
Sbjct: 238 LDPDDALNNVAYARAYNADHQLRLLDAAAQMMSESRFSLIVVDSVMALYRTDFSGRGELS 297
Query: 246 DRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIR 304
RQ L + + L +++++F VAV +TNQV+A GG+ F DPKKP GG+++AH+ T R
Sbjct: 298 ARQMHLAKFMRALQRLADQFGVAVVVTNQVVAQVDGGMAFNPDPKKPIGGNIMAHSSTTR 357
Query: 305 LMFRKGKGEQRVCKVFDAPNLPEAEAISFSY 335
L F+KGKG QR+CKV D+P LPEAE + Y
Sbjct: 358 LGFKKGKGCQRLCKVVDSPCLPEAECVFAIY 388
>UNIPROTKB|B6JXU7 [details] [associations]
symbol:SJAG_01410 "DNA repair protein RAD51" species:402676
"Schizosaccharomyces japonicus yFS275" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0003684 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 OrthoDB:EOG41CB4Z EMBL:DS022225
RefSeq:XP_002172658.1 ProteinModelPortal:B6JXU7 GeneID:7048158
Uniprot:B6JXU7
Length = 370
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 172/347 (49%), Positives = 233/347 (67%)
Query: 8 EEQSQLQLVEREDIDDEEDLFEA--IDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKH 65
E Q Q Q ++ E+ ++EE + + L+ GI GD+KK+ +AG YT + K+
Sbjct: 27 ENQQQQQELQVEE-EEEEGVAGPMPLQLLVGNGITTGDLKKVHEAGYYTVESIAYTPKRQ 85
Query: 66 LTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIET 125
L IKG+SEAK +K+ A K+V G+ T ++ +RR +I ITTGS+ LD LL GG+ET
Sbjct: 86 LLNIKGISEAKADKLLSEASKLVPMGFTTATEYHIRRSELITITTGSKQLDTLLQGGVET 145
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 185
G+ITE FGEFR+GK+Q+ HTL V QLP +M GG GK YIDTEGTFRP R++ +AER+G
Sbjct: 146 GSITELFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVAERYG 205
Query: 186 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELA 245
++ VLDN+ YARAY +HQ LL A M+E F LL+VDS AL+R DF+GRGEL+
Sbjct: 206 LNGEEVLDNVAYARAYNADHQLELLQQAANMMAESRFSLLVVDSCTALYRTDFSGRGELS 265
Query: 246 DRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRL 305
RQ L + + L ++++EF +AV +TNQV+A G F DPKKP GG++LAH+ T RL
Sbjct: 266 ARQMHLARFMRTLQRLADEFGIAVVITNQVVAQVDGISFNPDPKKPIGGNILAHSSTTRL 325
Query: 306 MFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RKG+GEQR+CKV+D+P LPE+EAI F+ I GI D K+
Sbjct: 326 SLRKGRGEQRICKVYDSPCLPESEAI-FA-------INSDGIGDPKE 364
>WB|WBGene00004297 [details] [associations]
symbol:rad-51 species:6239 "Caenorhabditis elegans"
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0003684
"damaged DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0009432 "SOS
response" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0033554 "cellular
response to stress" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0035188 "hatching" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0042771 "intrinsic apoptotic
signaling pathway in response to DNA damage by p53 class mediator"
evidence=IGI] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0043073 "germ cell nucleus" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0000150 "recombinase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0017151 "DEAD/H-box RNA
helicase binding" evidence=IPI] [GO:0003690 "double-stranded DNA
binding" evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 UniGene:Cel.19596
GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914 NextBio:898916
RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25 SMR:Q95Q25
DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974 STRING:Q95Q25
EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b WormBase:Y43C5A.6a
InParanoid:Q95Q25 ArrayExpress:Q95Q25 Uniprot:Q95Q25
Length = 395
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 170/349 (48%), Positives = 234/349 (67%)
Query: 6 KAEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKH 65
+A +Q+ L ++ ++++ F IDKL S GI++GD+ KL++AG YT L T++
Sbjct: 54 RAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYYTYESLAFTTRRE 113
Query: 66 LTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIET 125
L +KG+S+ K EKI + A K V G+ TG++ ++R +++I TGS +LD LLGGGIET
Sbjct: 114 LRNVKGISDQKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIET 173
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 185
G+ITE +GE+R+GKTQL H+L V QLP +M GG GK YIDT TFRP+RI+ IA+R+
Sbjct: 174 GSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYN 233
Query: 186 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELA 245
MD VL+NI ARAY EH L++ A MSE + ++IVD A FR ++TGRG+LA
Sbjct: 234 MDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLA 293
Query: 246 DRQQKLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTI 303
+RQ KL L L K+++E+ VAV +TNQV+A D G +F +D KKP GGH++AH T
Sbjct: 294 ERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTT 353
Query: 304 RLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RL RKGKGE RV K+ +PNLPEAEA +Y IT GI DA++
Sbjct: 354 RLYLRKGKGENRVAKMVQSPNLPEAEA---TY-----SITNHGIEDARE 394
>UNIPROTKB|G5EGG8 [details] [associations]
symbol:rad-51 "RecA/Rad51/Dmc1-like protein" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0035188
GO:GO:0043066 GO:GO:0042771 GO:GO:0003684 GO:GO:0006281
GO:GO:0003690 GO:GO:0000794 GO:GO:0045132 SUPFAM:SSF47794
GO:GO:0008094 GO:GO:0010032 GO:GO:0043073 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838 EMBL:AF061201
EMBL:AB011382 PIR:T37305 RefSeq:NP_001023466.1 UniGene:Cel.19596
ProteinModelPortal:G5EGG8 SMR:G5EGG8 IntAct:G5EGG8
EnsemblMetazoa:Y43C5A.6b GeneID:177914 KEGG:cel:CELE_Y43C5A.6
CTD:177914 WormBase:Y43C5A.6b NextBio:898916 Uniprot:G5EGG8
Length = 357
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 170/349 (48%), Positives = 234/349 (67%)
Query: 6 KAEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKH 65
+A +Q+ L ++ ++++ F IDKL S GI++GD+ KL++AG YT L T++
Sbjct: 16 RAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYYTYESLAFTTRRE 75
Query: 66 LTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIET 125
L +KG+S+ K EKI + A K V G+ TG++ ++R +++I TGS +LD LLGGGIET
Sbjct: 76 LRNVKGISDQKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIET 135
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 185
G+ITE +GE+R+GKTQL H+L V QLP +M GG GK YIDT TFRP+RI+ IA+R+
Sbjct: 136 GSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYN 195
Query: 186 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELA 245
MD VL+NI ARAY EH L++ A MSE + ++IVD A FR ++TGRG+LA
Sbjct: 196 MDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLA 255
Query: 246 DRQQKLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTI 303
+RQ KL L L K+++E+ VAV +TNQV+A D G +F +D KKP GGH++AH T
Sbjct: 256 ERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTT 315
Query: 304 RLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RL RKGKGE RV K+ +PNLPEAEA +Y IT GI DA++
Sbjct: 316 RLYLRKGKGENRVAKMVQSPNLPEAEA---TY-----SITNHGIEDARE 356
>UNIPROTKB|Q95Q25 [details] [associations]
symbol:rad-51 "Protein RAD-51, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006310 "DNA recombination"
evidence=IDA] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0035188 GO:GO:0043066 GO:GO:0042771
GO:GO:0003684 GO:GO:0006281 GO:GO:0003690 GO:GO:0000794
GO:GO:0045132 SUPFAM:SSF47794 GO:GO:0008094 GO:GO:0010032
GO:GO:0043073 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150
KO:K04482 GeneTree:ENSGT00550000074609 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 HSSP:Q06609 EMBL:AL023838
UniGene:Cel.19596 GeneID:177914 KEGG:cel:CELE_Y43C5A.6 CTD:177914
NextBio:898916 RefSeq:NP_001023465.1 ProteinModelPortal:Q95Q25
SMR:Q95Q25 DIP:DIP-25225N IntAct:Q95Q25 MINT:MINT-226974
STRING:Q95Q25 EnsemblMetazoa:Y43C5A.6a UCSC:Y43C5A.6b
WormBase:Y43C5A.6a InParanoid:Q95Q25 ArrayExpress:Q95Q25
Uniprot:Q95Q25
Length = 395
Score = 842 (301.5 bits), Expect = 4.4e-84, P = 4.4e-84
Identities = 170/349 (48%), Positives = 234/349 (67%)
Query: 6 KAEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKH 65
+A +Q+ L ++ ++++ F IDKL S GI++GD+ KL++AG YT L T++
Sbjct: 54 RAADQALLNAAIEDNAMEQDENFTVIDKLESSGISSGDISKLKEAGYYTYESLAFTTRRE 113
Query: 66 LTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIET 125
L +KG+S+ K EKI + A K V G+ TG++ ++R +++I TGS +LD LLGGGIET
Sbjct: 114 LRNVKGISDQKAEKIMKEAMKFVQMGFTTGAEVHVKRSQLVQIRTGSASLDRLLGGGIET 173
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 185
G+ITE +GE+R+GKTQL H+L V QLP +M GG GK YIDT TFRP+RI+ IA+R+
Sbjct: 174 GSITEVYGEYRTGKTQLCHSLAVLCQLPIDMGGGEGKCMYIDTNATFRPERIIAIAQRYN 233
Query: 186 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELA 245
MD VL+NI ARAY EH L++ A MSE + ++IVD A FR ++TGRG+LA
Sbjct: 234 MDSAHVLENIAVARAYNSEHLMALIIRAGAMMSESRYAVVIVDCATAHFRNEYTGRGDLA 293
Query: 246 DRQQKLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTI 303
+RQ KL L L K+++E+ VAV +TNQV+A D G +F +D KKP GGH++AH T
Sbjct: 294 ERQMKLSAFLKCLAKLADEYGVAVIITNQVVAQVDGGASMFQADAKKPIGGHIIAHMSTT 353
Query: 304 RLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RL RKGKGE RV K+ +PNLPEAEA +Y IT GI DA++
Sbjct: 354 RLYLRKGKGENRVAKMVQSPNLPEAEA---TY-----SITNHGIEDARE 394
>TAIR|locus:2147092 [details] [associations]
symbol:RAD51 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003684 "damaged DNA binding"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010332 "response to gamma radiation" evidence=IEP;RCA]
[GO:0006302 "double-strand break repair" evidence=RCA;IMP]
[GO:0006259 "DNA metabolic process" evidence=IDA;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007126 "meiosis" evidence=RCA] [GO:0009555
"pollen development" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016568 "chromatin modification"
evidence=RCA] [GO:0031047 "gene silencing by RNA" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA] [GO:0045003
"double-strand break repair via synthesis-dependent strand
annealing" evidence=IDA] [GO:0009314 "response to radiation"
evidence=NAS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163
SMART:SM00278 SMART:SM00382 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0003684
GO:GO:0010332 EMBL:AF296834 GO:GO:0045003 SUPFAM:SSF47794
GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K04482 EMBL:U43652 EMBL:AJ001100 EMBL:U43528
IPI:IPI00532326 RefSeq:NP_568402.1 UniGene:At.110
ProteinModelPortal:P94102 SMR:P94102 DIP:DIP-31780N IntAct:P94102
STRING:P94102 EnsemblPlants:AT5G20850.1 GeneID:832208
KEGG:ath:AT5G20850 GeneFarm:4757 TAIR:At5g20850 InParanoid:P94102
OMA:MMAESRY PhylomeDB:P94102 ProtClustDB:PLN03186
Genevestigator:P94102 GermOnline:AT5G20850 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 Uniprot:P94102
Length = 342
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 171/350 (48%), Positives = 236/350 (67%)
Query: 4 TLKAEEQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTK 63
T + ++Q + +++D + + F +++L + GI + DVKKL+DAG+ T G+ +
Sbjct: 2 TTMEQRRNQNAVQQQDDEETQHGPFP-VEQLQAAGIASVDVKKLRDAGLCTVEGVAYTPR 60
Query: 64 KHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGI 123
K L IKG+S+AKV+KI EAA K+V G+ + S +R+ +I+IT+GS+ LD++L GGI
Sbjct: 61 KDLLQIKGISDAKVDKIVEAASKLVPLGFTSASQLHAQRQEIIQITSGSRELDKVLEGGI 120
Query: 124 ETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER 183
ETG+ITE +GEFRSGKTQL HTLCV QLP + GG GK YID EGTFRP R++ IA+R
Sbjct: 121 ETGSITELYGEFRSGKTQLCHTLCVTCQLPMDQGGGEGKAMYIDAEGTFRPQRLLQIADR 180
Query: 184 FGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGE 243
FG++ VL+N+ YARAY +HQ LLL A+ M E F LLIVDS AL+R DF+GRGE
Sbjct: 181 FGLNGADVLENVAYARAYNTDHQSRLLLEAASMMIETRFALLIVDSATALYRTDFSGRGE 240
Query: 244 LADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPK-KPAGGHVLAHAVT 302
L+ RQ L + L L K+++EF VAV +TNQV+A G + P+ KP GG+++AHA T
Sbjct: 241 LSARQMHLAKFLRSLQKLADEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATT 300
Query: 303 IRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RL RKG+ E+R+CKV +P LPEAEA +I+ G+ D KD
Sbjct: 301 TRLALRKGRAEERICKVISSPCLPEAEA--------RFQISTEGVTDCKD 342
>POMBASE|SPAC644.14c [details] [associations]
symbol:rad51 "RecA family recombinase Rad51/Rhp51"
species:4896 "Schizosaccharomyces pombe" [GO:0000150 "recombinase
activity" evidence=IDA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IMP] [GO:0000723 "telomere maintenance" evidence=IGI]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISS] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=NAS]
[GO:0000794 "condensed nuclear chromosome" evidence=ISO]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003691
"double-stranded telomeric DNA binding" evidence=IDA] [GO:0003697
"single-stranded DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISM;IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0006311 "meiotic gene conversion" evidence=IDA]
[GO:0006312 "mitotic recombination" evidence=IGI] [GO:0007533
"mating type switching" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0030998 "linear element" evidence=IDA]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=TAS] [GO:0042148 "strand invasion" evidence=TAS]
[GO:0043047 "single-stranded telomeric DNA binding" evidence=IDA]
[GO:0051260 "protein homooligomerization" evidence=IPI]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
PomBase:SPAC644.14c GO:GO:0005524 GO:GO:0005635 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003684 GO:GO:0051260 GO:GO:0000790
GO:GO:0000724 GO:GO:0006312 GO:GO:0000723 SUPFAM:SSF47794
GO:GO:0042138 GO:GO:0043047 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 GO:GO:0006311 GO:GO:0007533
GO:GO:0030998 GO:GO:0003691 GO:GO:0000711 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D13805 EMBL:Z22691 EMBL:Z24756 PIR:S42107
ProteinModelPortal:P36601 SMR:P36601 DIP:DIP-29235N IntAct:P36601
MINT:MINT-239321 STRING:P36601 OrthoDB:EOG41CB4Z NextBio:20804587
GO:GO:0033170 GO:GO:0042148 Uniprot:P36601
Length = 365
Score = 828 (296.5 bits), Expect = 1.3e-82, P = 1.3e-82
Identities = 163/316 (51%), Positives = 218/316 (68%)
Query: 20 DIDDEEDLFEA----IDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEA 75
++ DEED A + L GI A D+KK+ +AG YT + K+ L IKG+SEA
Sbjct: 32 NVQDEEDEAAAGPMPLQMLEGNGITASDIKKIHEAGYYTVESIAYTPKRQLLLIKGISEA 91
Query: 76 KVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEF 135
K +K+ A K+V G+ T ++ +RR +I ITTGS+ LD LL GG+ETG+ITE FGEF
Sbjct: 92 KADKLLGEASKLVPMGFTTATEYHIRRSELITITTGSKQLDTLLQGGVETGSITELFGEF 151
Query: 136 RSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNI 195
R+GK+Q+ HTL V QLP +M GG GK YIDTEGTFRP R++ +A+R+G++ VLDN+
Sbjct: 152 RTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPVRLLAVADRYGLNGEEVLDNV 211
Query: 196 IYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQML 255
YARAY +HQ LL A MSE F LL+VDS AL+R DF+GRGEL+ RQ L + +
Sbjct: 212 AYARAYNADHQLELLQQAANMMSESRFSLLVVDSCTALYRTDFSGRGELSARQMHLARFM 271
Query: 256 SRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQR 315
L ++++EF +AV +TNQV+A G F DPKKP GG++LAH+ T RL RKG+GEQR
Sbjct: 272 RTLQRLADEFGIAVVITNQVVAQVDGISFNPDPKKPIGGNILAHSSTTRLSLRKGRGEQR 331
Query: 316 VCKVFDAPNLPEAEAI 331
+CK++D+P LPE+EAI
Sbjct: 332 ICKIYDSPCLPESEAI 347
>UNIPROTKB|Q6BP40 [details] [associations]
symbol:DEHA2E16742g "DEHA2E16742p" species:284592
"Debaryomyces hansenii CBS767" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0003690 GO:GO:0003697
GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094 EMBL:CR382137
GenomeReviews:CR382137_GR HOGENOM:HOG000227426 KO:K10872
OMA:FFQDIDL InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 RefSeq:XP_460030.2 ProteinModelPortal:Q6BP40
STRING:Q6BP40 GeneID:2902232 KEGG:dha:DEHA2E16742g Uniprot:Q6BP40
Length = 330
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 164/304 (53%), Positives = 223/304 (73%)
Query: 31 IDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNF 90
+D+L + GINAGD+ KL+ AG+ + ++ T++++ IKGLSE KVEKI EAA K+++
Sbjct: 16 VDELQNHGINAGDITKLKAAGVCSIASVLSTTRRNMCKIKGLSEVKVEKIKEAAGKLMHS 75
Query: 91 GYITGS-DALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
G+I + A LR +A ++TGS+ LD++LGGG+ + +ITE FGEFR GKTQL HTLCV
Sbjct: 76 GFIPATVQAELRSRA-FTLSTGSKQLDDVLGGGVSSMSITEVFGEFRCGKTQLCHTLCVT 134
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNL 209
QLP M G GKVAYIDTEGTFRPDRI IAERF +D A L+NI YARA EHQ L
Sbjct: 135 AQLPKEMGGSEGKVAYIDTEGTFRPDRIRSIAERFQVDADACLENISYARALNSEHQMEL 194
Query: 210 LLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAV 269
L + ++ +RLL+VDS++A FRVD++GRGEL DRQQKL Q LS L +++E++NVAV
Sbjct: 195 AEQLGLQFADGTYRLLVVDSIMACFRVDYSGRGELNDRQQKLNQHLSSLIRLAEDYNVAV 254
Query: 270 YMTNQVIADPGGG-VFIS-DPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPE 327
++TNQV +DPG +F + D +KP GGH+LAHA R++ RKG+GE+RV K+ D+P++ E
Sbjct: 255 FLTNQVQSDPGASSLFAAADGRKPVGGHILAHASATRILLRKGRGEERVAKLQDSPDMAE 314
Query: 328 AEAI 331
E +
Sbjct: 315 KECV 318
>ASPGD|ASPL0000094064 [details] [associations]
symbol:AN11929 species:162425 "Emericella nidulans"
[GO:0032545 "CURI complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0034456 "UTP-C complex" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0000028 "ribosomal small
subunit assembly" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 175/337 (51%), Positives = 223/337 (66%)
Query: 17 EREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAK 76
E D ++D ID + + GI A D+ KL+ G +T + T+K L IKG SE K
Sbjct: 5 EASDEFGDDDYIVDIDCIQAHGIGAADITKLKANGFFTIASIHGATRKTLLKIKGFSEIK 64
Query: 77 VEKICEAAEKIVNF--GYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGE 134
VEKI EA K + G+IT + +RK V++I+TGS+ D +LGGG ++ +I+E FGE
Sbjct: 65 VEKIKEAINKCLPSASGFITAMELSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGE 124
Query: 135 FRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDN 194
FR GKTQL+HT+ V QLP +M G GKVAYIDTEGTFRP+RI IAERFG+DP + +N
Sbjct: 125 FRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKEN 184
Query: 195 IIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 254
I YARA EHQ LL L+ + +RLLI+DS++ FRVDF GRGELADRQQKL Q
Sbjct: 185 IAYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQF 244
Query: 255 LSRLTKISEEFNVAVYMTNQVIADPGGGVFIS--DPKKPAGGHVLAHAVTIRLMFRKGKG 312
L +L ++EEFNV V MTNQV +DPG S D +KP GGHVLAHA T R++ RKG+G
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRVLLRKGRG 304
Query: 313 EQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
E+RV K+ D+P+ PE EA +Y IT GGI D
Sbjct: 305 EERVAKIQDSPDCPEREA---TY-----LITNGGIDD 333
>ASPGD|ASPL0000098803 [details] [associations]
symbol:AN11930 species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000150 "recombinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0006311 "meiotic gene conversion" evidence=IEA]
[GO:0000709 "meiotic joint molecule formation" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011940 InterPro:IPR012677 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
Gene3D:3.30.70.330 EMBL:BN001306 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
eggNOG:COG0468 KO:K10872 InterPro:IPR013632 Pfam:PF08423
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 175/337 (51%), Positives = 223/337 (66%)
Query: 17 EREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAK 76
E D ++D ID + + GI A D+ KL+ G +T + T+K L IKG SE K
Sbjct: 5 EASDEFGDDDYIVDIDCIQAHGIGAADITKLKANGFFTIASIHGATRKTLLKIKGFSEIK 64
Query: 77 VEKICEAAEKIVNF--GYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGE 134
VEKI EA K + G+IT + +RK V++I+TGS+ D +LGGG ++ +I+E FGE
Sbjct: 65 VEKIKEAINKCLPSASGFITAMELSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGE 124
Query: 135 FRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDN 194
FR GKTQL+HT+ V QLP +M G GKVAYIDTEGTFRP+RI IAERFG+DP + +N
Sbjct: 125 FRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKEN 184
Query: 195 IIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 254
I YARA EHQ LL L+ + +RLLI+DS++ FRVDF GRGELADRQQKL Q
Sbjct: 185 IAYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQF 244
Query: 255 LSRLTKISEEFNVAVYMTNQVIADPGGGVFIS--DPKKPAGGHVLAHAVTIRLMFRKGKG 312
L +L ++EEFNV V MTNQV +DPG S D +KP GGHVLAHA T R++ RKG+G
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRVLLRKGRG 304
Query: 313 EQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
E+RV K+ D+P+ PE EA +Y IT GGI D
Sbjct: 305 EERVAKIQDSPDCPEREA---TY-----LITNGGIDD 333
>UNIPROTKB|Q5ARI8 [details] [associations]
symbol:AN9092.2 "Meiotic recombination protein (Dmc1),
putative (AFU_orthologue; AFUA_7G02200)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR012677
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0006281 Gene3D:3.30.70.330 EMBL:BN001306
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 KO:K10872
InterPro:IPR013632 Pfam:PF08423 TIGRFAMs:TIGR02238 GO:GO:0000150
OrthoDB:EOG43XZC8 EMBL:AACD01000169 InterPro:IPR024326 Pfam:PF12923
RefSeq:XP_682361.1 ProteinModelPortal:Q5ARI8 STRING:Q5ARI8
EnsemblFungi:CADANIAT00009522 GeneID:2868034 KEGG:ani:AN9092.2
HOGENOM:HOG000201580 Uniprot:Q5ARI8
Length = 658
Score = 812 (290.9 bits), Expect = 6.6e-81, P = 6.6e-81
Identities = 175/337 (51%), Positives = 223/337 (66%)
Query: 17 EREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAK 76
E D ++D ID + + GI A D+ KL+ G +T + T+K L IKG SE K
Sbjct: 5 EASDEFGDDDYIVDIDCIQAHGIGAADITKLKANGFFTIASIHGATRKTLLKIKGFSEIK 64
Query: 77 VEKICEAAEKIVNF--GYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGE 134
VEKI EA K + G+IT + +RK V++I+TGS+ D +LGGG ++ +I+E FGE
Sbjct: 65 VEKIKEAINKCLPSASGFITAMELSHQRKRVVRISTGSKQFDSILGGGFQSMSISEVFGE 124
Query: 135 FRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDN 194
FR GKTQL+HT+ V QLP +M G GKVAYIDTEGTFRP+RI IAERFG+DP + +N
Sbjct: 125 FRCGKTQLSHTMSVVAQLPKDMGGAEGKVAYIDTEGTFRPERIGQIAERFGVDPDSAKEN 184
Query: 195 IIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 254
I YARA EHQ LL L+ + +RLLI+DS++ FRVDF GRGELADRQQKL Q
Sbjct: 185 IAYARALNSEHQLELLNTLSKEFVGGEYRLLIIDSIMNCFRVDFCGRGELADRQQKLNQF 244
Query: 255 LSRLTKISEEFNVAVYMTNQVIADPGGGVFIS--DPKKPAGGHVLAHAVTIRLMFRKGKG 312
L +L ++EEFNV V MTNQV +DPG S D +KP GGHVLAHA T R++ RKG+G
Sbjct: 245 LMKLAHMAEEFNVCVLMTNQVQSDPGASALFSGADGRKPVGGHVLAHASTTRVLLRKGRG 304
Query: 313 EQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
E+RV K+ D+P+ PE EA +Y IT GGI D
Sbjct: 305 EERVAKIQDSPDCPEREA---TY-----LITNGGIDD 333
>UNIPROTKB|Q0MR21 [details] [associations]
symbol:Q0MR21 "DMC1-like protein" species:37727
"Talaromyces marneffei" [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0003690 "double-stranded DNA binding"
evidence=ISS] [GO:0003697 "single-stranded DNA binding"
evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS] [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0006281
GO:GO:0016887 GO:GO:0003690 GO:GO:0003697 GO:GO:0007131
SUPFAM:SSF47794 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 TIGRFAMs:TIGR02238 GO:GO:0000150
EMBL:DQ863299 ProteinModelPortal:Q0MR21 Uniprot:Q0MR21
Length = 337
Score = 809 (289.8 bits), Expect = 1.4e-80, P = 1.4e-80
Identities = 172/337 (51%), Positives = 225/337 (66%)
Query: 17 EREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAK 76
E D D +D ID + + GI A DV KL+ G +T + T++ L IKG SE K
Sbjct: 5 EVSDDSDVDDFIIDIDNIEAHGIGAADVIKLKAHGYFTVASVHGATRRTLLKIKGFSEIK 64
Query: 77 VEKICEAAEKIVNF--GYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGE 134
VEKI +A +K + G+IT + +RK V KI+TGS+ D +LGGG ++ +I+E +GE
Sbjct: 65 VEKIKDAIQKCLPTANGFITAIELCHQRKKVFKISTGSKQFDTILGGGFQSSSISEVYGE 124
Query: 135 FRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDN 194
FR GKTQL+HT+ V QLP M GG GKVAYIDTEGTFRPDRI IAER+G+D + +N
Sbjct: 125 FRCGKTQLSHTMSVIAQLPKEMGGGEGKVAYIDTEGTFRPDRIAQIAERYGLDAESTQEN 184
Query: 195 IIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQM 254
I YARA EHQ LL L+ + + +RLL++DS++ FRVDF+GRGELA+RQQKL Q
Sbjct: 185 ISYARALNSEHQLELLNTLSKEFAGGQYRLLVIDSIMNCFRVDFSGRGELAERQQKLNQF 244
Query: 255 LSRLTKISEEFNVAVYMTNQVIADPGGGVFIS--DPKKPAGGHVLAHAVTIRLMFRKGKG 312
L RL+ ++EEFNV V MTNQV +DPG + D +KP GGHVLAHA T R++ RKG+G
Sbjct: 245 LIRLSHLAEEFNVCVLMTNQVQSDPGASALFAGADGRKPVGGHVLAHASTTRVLLRKGRG 304
Query: 313 EQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
++RV K+ D+P+ PE EA +Y IT GGI D
Sbjct: 305 DERVAKIQDSPDCPEREA---TY-----VITNGGIND 333
>UNIPROTKB|A3E3X6 [details] [associations]
symbol:rad51 "Rad51" species:263815 "Pneumocystis murina"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865194 EMBL:DQ865195
ProteinModelPortal:A3E3X6 SMR:A3E3X6 Uniprot:A3E3X6
Length = 343
Score = 801 (287.0 bits), Expect = 9.7e-80, P = 9.7e-80
Identities = 167/345 (48%), Positives = 228/345 (66%)
Query: 14 QLVEREDID-DEEDLF---EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
+L E D +EED+ + KL GI+A D+KK+ +AG T + K+ + I
Sbjct: 6 ELAEETAQDMNEEDIICGPTPLSKLEGNGISASDIKKIIEAGYNTVEAIAYTPKRAILLI 65
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +K+ A K+V G+ T ++ RR +I ITTGS+ LD LL GGIETG+IT
Sbjct: 66 KGISEAKADKLISEASKLVPMGFTTATEFHQRRCELISITTGSKQLDTLLAGGIETGSIT 125
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPG 189
E FGEFR+GK+Q+ HTL V QLP +M GG GK YIDTEGTFRP R++ +A+R+G++
Sbjct: 126 EIFGEFRTGKSQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPTRLLAVADRYGLNGE 185
Query: 190 AVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VLDN+ YARAY +HQ LL A M+E F LLIVDS +L+R DF GRGEL+ RQ
Sbjct: 186 EVLDNVAYARAYNADHQLQLLGQAANMMAESRFSLLIVDSATSLYRTDFAGRGELSARQM 245
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMF 307
L + L L ++++E+ +AV +TNQV+A D +F DPKKP GG+++AH+ T RL
Sbjct: 246 HLAKFLRTLQRLADEYGIAVVITNQVVAQVDGNASMFNPDPKKPIGGNIIAHSSTTRLSL 305
Query: 308 RKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RKG+GEQR+CK++D+P L EA+A+ F+ IT GG+ D D
Sbjct: 306 RKGRGEQRICKIYDSPCLAEADAV-FA-------ITNGGVDDPVD 342
>UNIPROTKB|E2R3A3 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR010995 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000075091
EMBL:AAEX03007314 Ensembl:ENSCAFT00000035193 Uniprot:E2R3A3
Length = 285
Score = 444 (161.4 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 93/152 (61%), Positives = 117/152 (76%)
Query: 204 EHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKI 261
EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQKL QMLSRL KI
Sbjct: 142 EHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKI 201
Query: 262 SEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVF 320
SEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+ RKG+GE R+ K++
Sbjct: 202 SEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRVSLRKGRGELRIAKIY 261
Query: 321 DAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
D+P +PE EA +F+ IT GGI DAK+
Sbjct: 262 DSPEMPENEA-TFA-------ITAGGIGDAKE 285
Score = 375 (137.1 bits), Expect = 1.2e-79, Sum P(2) = 1.2e-79
Identities = 77/139 (55%), Positives = 99/139 (71%)
Query: 9 EQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTG 68
++ Q+ L E D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L
Sbjct: 2 KEDQVVLEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCN 61
Query: 69 IKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAI 128
+KGLSEAKV+KI EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AI
Sbjct: 62 VKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAI 121
Query: 129 TEAFGEFRSGKTQLAHTLC 147
TEAFGEFR+GKTQL+HTLC
Sbjct: 122 TEAFGEFRTGKTQLSHTLC 140
>UNIPROTKB|A3E3X4 [details] [associations]
symbol:rad51 "Rad51" species:4754 "Pneumocystis carinii"
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=ISS] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0003684 GO:GO:0006281 GO:GO:0016887
GO:GO:0003690 GO:GO:0003697 SUPFAM:SSF47794 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:DQ865192 EMBL:DQ865193
ProteinModelPortal:A3E3X4 SMR:A3E3X4 Uniprot:A3E3X4
Length = 343
Score = 799 (286.3 bits), Expect = 1.6e-79, P = 1.6e-79
Identities = 164/335 (48%), Positives = 224/335 (66%)
Query: 23 DEEDLF---EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEK 79
+EED+ + KL GI+A D+KK+ +AG T + K+ + IKG+SEAK +K
Sbjct: 16 NEEDIICGPTPLSKLEGNGISASDIKKIIEAGYNTVEAIAYTPKRAILLIKGISEAKADK 75
Query: 80 ICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGK 139
+ A K+V G+ T ++ RR +I ITTGS+ LD LL GGIETG+ITE FGEFR+GK
Sbjct: 76 LISEASKLVPMGFTTATEFHQRRCELISITTGSKQLDTLLAGGIETGSITEIFGEFRTGK 135
Query: 140 TQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYAR 199
+Q+ HTL V QLP +M GG GK YIDTEGTFRP R++ +A+R+G++ VLDN+ YAR
Sbjct: 136 SQICHTLAVTCQLPIDMGGGEGKCLYIDTEGTFRPTRLLAVADRYGLNGEEVLDNVAYAR 195
Query: 200 AYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLT 259
AY +HQ LL A M+E F LLIVDS +L+R DF GRGEL+ RQ L + L L
Sbjct: 196 AYNADHQLQLLGQAANMMAESRFSLLIVDSATSLYRTDFAGRGELSARQMHLAKFLRTLQ 255
Query: 260 KISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVC 317
++++E+ +AV +TNQV+A D +F DPKKP GG+++AH+ T RL RKG+GEQR+C
Sbjct: 256 RLADEYGIAVVITNQVVAQVDGNASMFNPDPKKPIGGNIIAHSSTTRLSLRKGRGEQRIC 315
Query: 318 KVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
K++D+P L EA+A+ F+ IT GG+ D D
Sbjct: 316 KIYDSPCLAEADAV-FA-------ITNGGVDDPVD 342
>UNIPROTKB|B4DMW6 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
SUPFAM:SSF47794 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320 UniGene:Hs.339396
HGNC:HGNC:2927 HOVERGEN:HBG001504 IPI:IPI00880171 EMBL:AK297664
ProteinModelPortal:B4DMW6 SMR:B4DMW6 STRING:B4DMW6
Ensembl:ENST00000428462 UCSC:uc011anv.1 ArrayExpress:B4DMW6
Bgee:B4DMW6 Uniprot:B4DMW6
Length = 285
Score = 445 (161.7 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 93/152 (61%), Positives = 117/152 (76%)
Query: 204 EHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKI 261
EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQKL QMLSRL KI
Sbjct: 142 EHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKI 201
Query: 262 SEEFNVAVYMTNQVIADPGGGV-FISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVF 320
SEE+NVAV++TNQ+ ADPG + F +DPKKP GGH+LAHA T R+ RKG+GE R+ K++
Sbjct: 202 SEEYNVAVFVTNQMTADPGATMTFQADPKKPIGGHILAHASTTRISLRKGRGELRIAKIY 261
Query: 321 DAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
D+P +PE EA +F+ IT GGI DAK+
Sbjct: 262 DSPEMPENEA-TFA-------ITAGGIGDAKE 285
Score = 371 (135.7 bits), Expect = 2.5e-79, Sum P(2) = 2.5e-79
Identities = 74/126 (58%), Positives = 93/126 (73%)
Query: 22 DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKIC 81
D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KGLSEAKV+KI
Sbjct: 15 DEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIK 74
Query: 82 EAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQ 141
EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AITEAFGEFR+GKTQ
Sbjct: 75 EAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQ 134
Query: 142 LAHTLC 147
L+HTLC
Sbjct: 135 LSHTLC 140
>UNIPROTKB|Q4WAR2 [details] [associations]
symbol:AFUA_7G02200 "Meiotic recombination protein (Dmc1),
putative" species:330879 "Aspergillus fumigatus Af293" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011940 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0007131 SUPFAM:SSF47794 GO:GO:0008094
HOGENOM:HOG000227426 KO:K10872 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
TIGRFAMs:TIGR02238 GO:GO:0000150 OrthoDB:EOG43XZC8
EMBL:AAHF01000015 RefSeq:XP_746712.1 ProteinModelPortal:Q4WAR2
STRING:Q4WAR2 EnsemblFungi:CADAFUAT00001154 GeneID:3504290
KEGG:afm:AFUA_7G02200 OMA:HAASTRI Uniprot:Q4WAR2
Length = 338
Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
Identities = 172/338 (50%), Positives = 221/338 (65%)
Query: 17 EREDIDDEEDLFEAIDKLISQGINAGD-VKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEA 75
E D + + L ID + + G + KL+ G YT + T+K L IKG SE
Sbjct: 5 ESGDEFNNDALIVDIDSIQAHGTPRPTYITKLKANGFYTVASVHGATRKTLLKIKGFSEF 64
Query: 76 KVEKICEAAEKIVNF--GYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFG 133
KVEKI EA +K + G+IT + +RK V+KI+TGS+ D +LGGG ++ +I+E FG
Sbjct: 65 KVEKIKEAIQKCLPAASGFITAMELSHQRKRVVKISTGSKQFDSILGGGFQSMSISEVFG 124
Query: 134 EFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLD 193
EFR GKTQL+HT+ V QLP M G +GKVAYIDTEGTFRP+RI IAERF +DP + +
Sbjct: 125 EFRCGKTQLSHTMSVVAQLPKEMGGADGKVAYIDTEGTFRPERIAQIAERFSVDPDSAQE 184
Query: 194 NIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQ 253
NI YARA EHQ LL L+ + + +RLLI+DS++ FRVD+ GRGELADRQQKL Q
Sbjct: 185 NIAYARALNSEHQLELLNTLSREFAGGEYRLLIIDSIMNCFRVDYCGRGELADRQQKLNQ 244
Query: 254 MLSRLTKISEEFNVAVYMTNQVIADPGGGVFIS--DPKKPAGGHVLAHAVTIRLMFRKGK 311
L RL ++EEFNV V MTNQV +DPG + D +KP GGHVLAHA T R++ RKG+
Sbjct: 245 FLMRLAHMAEEFNVCVLMTNQVQSDPGASALFAGADGRKPVGGHVLAHASTTRVLLRKGR 304
Query: 312 GEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
GE+RV K+ D+P+ PE EA +Y IT GGI D
Sbjct: 305 GEERVAKIQDSPDCPEREA---TY-----VITNGGIND 334
>FB|FBgn0003479 [details] [associations]
symbol:spn-A "spindle A" species:7227 "Drosophila
melanogaster" [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0048477 "oogenesis"
evidence=IMP;TAS] [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0030717 "karyosome
formation" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0006281 "DNA repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;NAS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0000150 "recombinase activity"
evidence=ISS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0000075 "cell cycle checkpoint" evidence=IMP] [GO:0007143
"female meiosis" evidence=IMP] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=IEA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0009949 GO:GO:0007294 GO:GO:0003684 GO:GO:0007143
GO:GO:0008298 GO:GO:0030717 GO:GO:0000075 GO:GO:0045003
SUPFAM:SSF47794 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 KO:K04482
GeneTree:ENSGT00550000074609 OMA:MMAESRY PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 EMBL:D37788 EMBL:D17726 EMBL:L41342
EMBL:BT001791 RefSeq:NP_524583.1 RefSeq:NP_733342.1 UniGene:Dm.1913
ProteinModelPortal:Q27297 SMR:Q27297 DIP:DIP-20846N IntAct:Q27297
MINT:MINT-337614 STRING:Q27297 PaxDb:Q27297 PRIDE:Q27297
EnsemblMetazoa:FBtr0085589 GeneID:43577 KEGG:dme:Dmel_CG7948
CTD:43577 FlyBase:FBgn0003479 InParanoid:Q27297 OrthoDB:EOG4P2NHW
PhylomeDB:Q27297 GenomeRNAi:43577 NextBio:834653 Bgee:Q27297
GermOnline:CG7948 GO:GO:0009951 Uniprot:Q27297
Length = 336
Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
Identities = 161/341 (47%), Positives = 221/341 (64%)
Query: 12 QLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKG 71
+L V+ + ++EE+ ++ KLI I A D+K LQ A ++T + TKK L I G
Sbjct: 3 KLTNVQAQQEEEEEEGPLSVTKLIGGSITAKDIKLLQQASLHTVESVANATKKQLMAIPG 62
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEA 131
L KVE+I A K+V G+++ R V++++TGS+ LD+LLGGGIETG+ITE
Sbjct: 63 LGGGKVEQIITEANKLVPLGFLSARTFYQMRADVVQLSTGSKELDKLLGGGIETGSITEI 122
Query: 132 FGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAV 191
FGEFR GKTQL HTL V QLP + +GG GK YIDTE TFRP+R+ IA+R+ ++ V
Sbjct: 123 FGEFRCGKTQLCHTLAVTCQLPISQKGGEGKCMYIDTENTFRPERLAAIAQRYKLNESEV 182
Query: 192 LDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKL 251
LDN+ + RA+ + Q L+ A + E + LLIVDS +AL+R D+ GRGELA RQ L
Sbjct: 183 LDNVAFTRAHNSDQQTKLIQMAAGMLFESRYALLIVDSAMALYRSDYIGRGELAARQNHL 242
Query: 252 GQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGK 311
G L L ++++EF VAV +TNQV A G + D KKP GGH++AH+ T RL RKGK
Sbjct: 243 GLFLRMLQRLADEFGVAVVITNQVTASLDGAPGMFDAKKPIGGHIMAHSSTTRLYLRKGK 302
Query: 312 GEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
GE R+CK++D+P LPE+EA+ F+ I P GI DA++
Sbjct: 303 GETRICKIYDSPCLPESEAM-FA-------ILPDGIGDARE 335
>ASPGD|ASPL0000057020 [details] [associations]
symbol:uvsC species:162425 "Emericella nidulans"
[GO:0006281 "DNA repair" evidence=IMP] [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IMP]
[GO:0006312 "mitotic recombination" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0006311 "meiotic gene conversion"
evidence=IEA] [GO:0000711 "meiotic DNA repair synthesis"
evidence=IEA] [GO:0007533 "mating type switching" evidence=IEA]
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0000723
"telomere maintenance" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0030998 "linear element" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0003691 "double-stranded telomeric DNA binding" evidence=IEA]
[GO:0000150 "recombinase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0043047 "single-stranded telomeric DNA
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] InterPro:IPR003583
InterPro:IPR003593 InterPro:IPR010995 InterPro:IPR011941
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00278 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003684 GO:GO:0006281 SUPFAM:SSF47794
GO:GO:0008094 HOGENOM:HOG000227426 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 OMA:MMAESRY
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProteinModelPortal:C8VSQ3
SMR:C8VSQ3 EnsemblFungi:CADANIAT00001386 Uniprot:C8VSQ3
Length = 348
Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
Identities = 150/297 (50%), Positives = 202/297 (68%)
Query: 38 GINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 97
G+ + D+K DAG +T + K+ L IKG+SE K KI A K+V G+ T ++
Sbjct: 33 GLTSRDIKLFVDAGYHTVESIAYTPKRLLEQIKGISEQKATKILVEAAKLVPMGFTTATE 92
Query: 98 ALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMR 157
RR +I ITTGS+ LD LLGGGIETG+ITE FGEFR+GK+Q+ HTL V QLP +M
Sbjct: 93 MHARRSELISITTGSKQLDTLLGGGIETGSITEIFGEFRTGKSQICHTLAVTCQLPFDMG 152
Query: 158 GGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKM 217
GG GK YIDTEGTFRP R++ +A+R+G+ VLDN+ YARAY +HQ LL + M
Sbjct: 153 GGEGKCLYIDTEGTFRPVRLLAVAQRYGLVGEEVLDNVAYARAYNSDHQLQLLNQASQMM 212
Query: 218 SEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIA 277
E F LL+VDS +L+R DF GRGEL+ RQ L + + L ++++EF +AV +TNQV+A
Sbjct: 213 CETRFSLLVVDSATSLYRTDFNGRGELSTRQTHLAKFMRTLQRLADEFGIAVVITNQVVA 272
Query: 278 DPGGG---VFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAI 331
GG +F DPKKP GG+++AHA T RL +KG+GE RVCK++D+P LPE++ +
Sbjct: 273 QVDGGPSAMFNPDPKKPIGGNIIAHASTTRLSLKKGRGETRVCKIYDSPCLPESDCL 329
>GENEDB_PFALCIPARUM|PF11_0087 [details] [associations]
symbol:PF11_0087 "Rad51 homolog, putative"
species:5833 "Plasmodium falciparum" [GO:0000150 "recombinase
activity" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR003583 InterPro:IPR003593 InterPro:IPR010995
InterPro:IPR011941 InterPro:IPR020587 InterPro:IPR020588
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0003684 GO:GO:0006281
SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482 PANTHER:PTHR22942:SF12
TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035 GenomeReviews:AE014186_GR
RefSeq:XP_001347762.2 ProteinModelPortal:Q8IIS8 SMR:Q8IIS8
EnsemblProtists:PF11_0087:mRNA GeneID:810638 KEGG:pfa:PF11_0087
EuPathDB:PlasmoDB:PF3D7_1107400 Uniprot:Q8IIS8
Length = 350
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 160/351 (45%), Positives = 227/351 (64%)
Query: 8 EEQSQLQLVEREDIDD--EEDLFEA---IDKLISQGINAGDVKKLQDAGIYTCNGLMMHT 62
E++SQ ++ ID+ EE L+ I++L+++G D++ L++ G+ T +
Sbjct: 8 EDKSQ-KISNSSTIDEIEEEQLYTGPLKIEQLLAKGFVKRDLELLKEGGLQTVECVAYAP 66
Query: 63 KKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGG 122
+ L IKG+SE K EK+ +A +++ N G+ D R+ +IK TTGS+ LD LL GG
Sbjct: 67 MRTLCAIKGISEQKAEKLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGG 126
Query: 123 IETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
IETG ITE FGEFR+GK+QL HTL + QLP GG GK +IDTEGTFRP+RIV IA+
Sbjct: 127 IETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAK 186
Query: 183 RFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRG 242
R+G+ P L+NI YA+AY +HQ LL+ +A M++ F LLIVDS AL+R ++ GRG
Sbjct: 187 RYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMMADARFALLIVDSATALYRSEYIGRG 246
Query: 243 ELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGG-GVFISDPKKPAGGHVLAHAV 301
ELA+RQ L + L L +I++ + VAV +TNQV+A +F K P GG+++AHA
Sbjct: 247 ELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVAKVDAMSMFGGHEKIPIGGNIIAHAS 306
Query: 302 TIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RL RKG+GE R+CK++D+P LPE EA+ F+ IT GGIAD ++
Sbjct: 307 QTRLYLRKGRGESRICKIYDSPVLPEGEAV-FA-------ITEGGIADYEE 349
>UNIPROTKB|Q8IIS8 [details] [associations]
symbol:Rad51 "Rad51 homolog" species:36329 "Plasmodium
falciparum 3D7" [GO:0000150 "recombinase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] InterPro:IPR003583 InterPro:IPR003593
InterPro:IPR010995 InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00278
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AE014186 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0000150 KO:K04482
PANTHER:PTHR22942:SF12 TIGRFAMs:TIGR02239 ProtClustDB:PTZ00035
GenomeReviews:AE014186_GR RefSeq:XP_001347762.2
ProteinModelPortal:Q8IIS8 SMR:Q8IIS8 EnsemblProtists:PF11_0087:mRNA
GeneID:810638 KEGG:pfa:PF11_0087 EuPathDB:PlasmoDB:PF3D7_1107400
Uniprot:Q8IIS8
Length = 350
Score = 736 (264.1 bits), Expect = 7.5e-73, P = 7.5e-73
Identities = 160/351 (45%), Positives = 227/351 (64%)
Query: 8 EEQSQLQLVEREDIDD--EEDLFEA---IDKLISQGINAGDVKKLQDAGIYTCNGLMMHT 62
E++SQ ++ ID+ EE L+ I++L+++G D++ L++ G+ T +
Sbjct: 8 EDKSQ-KISNSSTIDEIEEEQLYTGPLKIEQLLAKGFVKRDLELLKEGGLQTVECVAYAP 66
Query: 63 KKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGG 122
+ L IKG+SE K EK+ +A +++ N G+ D R+ +IK TTGS+ LD LL GG
Sbjct: 67 MRTLCAIKGISEQKAEKLKKACKELCNSGFCNAIDYHDARQNLIKFTTGSKQLDALLKGG 126
Query: 123 IETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE 182
IETG ITE FGEFR+GK+QL HTL + QLP GG GK +IDTEGTFRP+RIV IA+
Sbjct: 127 IETGGITELFGEFRTGKSQLCHTLAITCQLPIEQSGGEGKCLWIDTEGTFRPERIVAIAK 186
Query: 183 RFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRG 242
R+G+ P L+NI YA+AY +HQ LL+ +A M++ F LLIVDS AL+R ++ GRG
Sbjct: 187 RYGLHPTDCLNNIAYAKAYNCDHQTELLIDASAMMADARFALLIVDSATALYRSEYIGRG 246
Query: 243 ELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGG-GVFISDPKKPAGGHVLAHAV 301
ELA+RQ L + L L +I++ + VAV +TNQV+A +F K P GG+++AHA
Sbjct: 247 ELANRQSHLCRFLRGLQRIADIYGVAVIITNQVVAKVDAMSMFGGHEKIPIGGNIIAHAS 306
Query: 302 TIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAKD 352
RL RKG+GE R+CK++D+P LPE EA+ F+ IT GGIAD ++
Sbjct: 307 QTRLYLRKGRGESRICKIYDSPVLPEGEAV-FA-------ITEGGIADYEE 349
>UNIPROTKB|Q0U9F0 [details] [associations]
symbol:SNOG_11614 "Putative uncharacterized protein"
species:321614 "Phaeosphaeria nodorum SN15" [GO:0000150
"recombinase activity" evidence=ISS] [GO:0003690 "double-stranded
DNA binding" evidence=ISS] [GO:0003697 "single-stranded DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR010995
InterPro:IPR020587 InterPro:IPR020588 PROSITE:PS50162
PROSITE:PS50163 GO:GO:0005524 GO:GO:0016887 GO:GO:0003690
GO:GO:0003697 GO:GO:0000794 SUPFAM:SSF47794 GO:GO:0008094 KO:K10872
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000150 OrthoDB:EOG43XZC8 GO:GO:0000709
EMBL:CH445343 RefSeq:XP_001801853.1 ProteinModelPortal:Q0U9F0
EnsemblFungi:SNOT_11614 GeneID:5978761 KEGG:pno:SNOG_11614
Uniprot:Q0U9F0
Length = 353
Score = 572 (206.4 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 128/260 (49%), Positives = 164/260 (63%)
Query: 91 GYITGSDALLRRKAVIKITTGSQALDELLGGGIETGA---ITEAFG-------EFRSG-- 138
G+ T + +RK V+KI+TGS+ LD +LGG + I A+ E + G
Sbjct: 89 GFQTAHELGQQRKRVLKISTGSKQLDTILGGWVHASLRLKIMIAYTLKWLPDYEHQRGLR 148
Query: 139 KTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYA 198
+ L V LP +M G GKVAYIDTEGTFRP+RI IAERFG+DP DNI YA
Sbjct: 149 RVPLWKDADVPYYLPKDMGGAEGKVAYIDTEGTFRPERIAQIAERFGVDPETTQDNITYA 208
Query: 199 RAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRL 258
RA EHQ LL +A +RLLI+DS++ALFRVD+TGRGEL +RQQKL Q LS+L
Sbjct: 209 RAVNSEHQMELLNKVAEFFVGNEYRLLIIDSIMALFRVDYTGRGELNERQQKLNQFLSKL 268
Query: 259 TKISEEFNVAVYMTNQVIADPGGGVFIS--DPKKPAGGHVLAHAVTIRLMFRKGKGEQRV 316
T ++EEFNVAV +TNQV +DPG + D +KP GGH+LAHA R++ RKG+GE+RV
Sbjct: 269 THVAEEFNVAVLLTNQVQSDPGASALFAGADGRKPVGGHILAHASATRILLRKGRGEERV 328
Query: 317 CKVFDAPNLPEAEAISFSYH 336
K+ D+P + E YH
Sbjct: 329 AKIQDSPGIYAREGGDV-YH 347
Score = 154 (59.3 bits), Expect = 7.7e-70, Sum P(2) = 7.7e-70
Identities = 42/117 (35%), Positives = 65/117 (55%)
Query: 16 VEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEA 75
V +D D+ + + ID + + GI A D+ KL+ G YT + T+++L IKG SE
Sbjct: 6 VASDDSGDDSFIVD-IDAIQAHGIGAVDIAKLKANGYYTIASVHSATRRNLLKIKGFSEI 64
Query: 76 KVEKICEAAEKI-VNF--------GYITGSDALLRRKAVIKITTGSQALDELLGGGI 123
KV+K+ +A K V G+ T + +RK V+KI+TGS+ LD +LGG +
Sbjct: 65 KVDKVKDAITKCQVTISLALHSGGGFQTAHELGQQRKRVLKISTGSKQLDTILGGWV 121
>UNIPROTKB|B0QYE0 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
HOGENOM:HOG000227426 InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320
UniGene:Hs.339396 HGNC:HGNC:2927 HOVERGEN:HBG001504 IPI:IPI00880171
SMR:B0QYE0 STRING:B0QYE0 Ensembl:ENST00000439567 Uniprot:B0QYE0
Length = 203
Score = 371 (135.7 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 74/126 (58%), Positives = 93/126 (73%)
Query: 22 DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKIC 81
D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KGLSEAKV+KI
Sbjct: 15 DEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIK 74
Query: 82 EAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQ 141
EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AITEAFGEFR+GKTQ
Sbjct: 75 EAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQ 134
Query: 142 LAHTLC 147
L+HTLC
Sbjct: 135 LSHTLC 140
Score = 202 (76.2 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 204 EHQYNLLLGLAAKMSEEP--FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKI 261
EHQ LL +AAK EE F+LLI+DS++ALFRVDF+GRGELA+RQQKL QMLSRL KI
Sbjct: 142 EHQMELLDYVAAKFHEEAGIFKLLIIDSIMALFRVDFSGRGELAERQQKLAQMLSRLQKI 201
Query: 262 SE 263
SE
Sbjct: 202 SE 203
>RGD|1563603 [details] [associations]
symbol:Rad51 "RAD51 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000724 "double-strand break repair via
homologous recombination" evidence=ISO] [GO:0000793 "condensed
chromosome" evidence=ISO] [GO:0000794 "condensed nuclear
chromosome" evidence=ISO] [GO:0000800 "lateral element"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=ISO] [GO:0003697
"single-stranded DNA binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006268 "DNA unwinding involved in replication"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0007126
"meiosis" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0016605 "PML body" evidence=ISO] [GO:0042493
"response to drug" evidence=IEP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0043142 "single-stranded DNA-dependent
ATPase activity" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] [GO:0051106 "positive regulation of DNA
ligation" evidence=ISO] [GO:0051260 "protein homooligomerization"
evidence=ISO] InterPro:IPR011941 InterPro:IPR020587
InterPro:IPR020588 PROSITE:PS50162 PROSITE:PS50163 RGD:1563603
GO:GO:0005524 GO:GO:0005634 GO:GO:0042493 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 IPI:IPI00948014 Ensembl:ENSRNOT00000068607
UCSC:RGD:1563603 ArrayExpress:F1LZR2 Uniprot:F1LZR2
Length = 236
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 96/178 (53%), Positives = 126/178 (70%)
Query: 128 ITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMD 187
ITE FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++ +AER+G+
Sbjct: 1 ITEMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLLAVAERYGLS 60
Query: 188 PGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADR 247
VLDN+ YAR + +HQ LL +A M E + LLIVDS AL+R D++GRGEL+ R
Sbjct: 61 GSDVLDNVAYARGFNTDHQTQLLYQASAMMVESRYALLIVDSATALYRTDYSGRGELSAR 120
Query: 248 QQKLGQMLSRLTKISEEFNVAVYMTNQVIAD-PGGGVFISDPKKPAGGHVLAHAVTIR 304
Q L + L L ++++EF VAV +TNQV+A G +F +DPKKP GG+++AHA T R
Sbjct: 121 QMHLARFLRMLLRLADEFGVAVVITNQVVAQVDGAAMFAADPKKPIGGNIIAHASTTR 178
>UNIPROTKB|E9PNT5 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00980924
ProteinModelPortal:E9PNT5 SMR:E9PNT5 Ensembl:ENST00000527860
UCSC:uc001zmn.1 ArrayExpress:E9PNT5 Bgee:E9PNT5 Uniprot:E9PNT5
Length = 172
Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
Identities = 90/169 (53%), Positives = 115/169 (68%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIV 178
E FGEFR+GKTQ+ HTL V QLP + GG GK YIDTEGTFRP+R++
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQLPIDRGGGEGKAMYIDTEGTFRPERLL 172
>UNIPROTKB|B0QYE1 [details] [associations]
symbol:DMC1 "Meiotic recombination protein DMC1/LIM15
homolog" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0000239 "pachytene"
evidence=IEA] [GO:0000781 "chromosome, telomeric region"
evidence=IEA] [GO:0000794 "condensed nuclear chromosome"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] InterPro:IPR010995 InterPro:IPR020588
PROSITE:PS50162 GO:GO:0005524 GO:GO:0007286 GO:GO:0003677
GO:GO:0006259 GO:GO:0001541 GO:GO:0000794 GO:GO:0001556
GO:GO:0000781 SUPFAM:SSF47794 GO:GO:0007141 GO:GO:0000239
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 EMBL:AL022320
UniGene:Hs.339396 HGNC:HGNC:2927 IPI:IPI00880014 SMR:B0QYE1
STRING:B0QYE1 Ensembl:ENST00000415483 HOGENOM:HOG000172484
HOVERGEN:HBG071410 Uniprot:B0QYE1
Length = 139
Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 73/125 (58%), Positives = 92/125 (73%)
Query: 22 DDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKIC 81
D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L +KGLSEAKV+KI
Sbjct: 15 DEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCNVKGLSEAKVDKIK 74
Query: 82 EAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQ 141
EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AITEAFGEFR+GKTQ
Sbjct: 75 EAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQ 134
Query: 142 LAHTL 146
L+HTL
Sbjct: 135 LSHTL 139
>UNIPROTKB|E9PJ30 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR011941
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00278 GO:GO:0005524
GO:GO:0003684 GO:GO:0006281 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 InterPro:IPR013632 Pfam:PF08423
PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51 IPI:IPI00976981
ProteinModelPortal:E9PJ30 SMR:E9PJ30 Ensembl:ENST00000525066
ArrayExpress:E9PJ30 Bgee:E9PJ30 Uniprot:E9PJ30
Length = 151
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 73/143 (51%), Positives = 95/143 (66%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAIT 129
KG+SEAK +KI A K+V G+ T ++ RR +I+ITTGS+ LD+LL GGIETG+IT
Sbjct: 64 KGISEAKADKILAEAAKLVPMGFTTATEFHQRRSEIIQITTGSKELDKLLQGGIETGSIT 123
Query: 130 EAFGEFRSGKTQLAHTLCVCTQL 152
E FGEFR+GKTQ+ HTL V Q+
Sbjct: 124 EMFGEFRTGKTQICHTLAVTCQV 146
>UNIPROTKB|J9NV21 [details] [associations]
symbol:DMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR010995 InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 SUPFAM:SSF47794
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000075091 EMBL:AAEX03007314
Ensembl:ENSCAFT00000043221 Uniprot:J9NV21
Length = 128
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 65/125 (52%), Positives = 85/125 (68%)
Query: 9 EQSQLQLVEREDIDDEEDLFEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTG 68
++ Q+ L E D+EE LF+ ID L GIN D+KKL+ GI T G+ M T++ L
Sbjct: 2 KEDQVVLEEPGFQDEEESLFQDIDLLQKHGINVADIKKLKSVGICTIKGIQMTTRRALCN 61
Query: 69 IKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAI 128
+KGLSEAKV+KI EAA K++ G++T + +RK V ITTGSQ D+LLGGGIE+ AI
Sbjct: 62 VKGLSEAKVDKIKEAANKLIEPGFLTAFEYSEKRKMVFHITTGSQEFDKLLGGGIESMAI 121
Query: 129 TEAFG 133
TEAFG
Sbjct: 122 TEAFG 126
>ZFIN|ZDB-GENE-040426-2750 [details] [associations]
symbol:rad51b "RAD51 homolog B (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 ZFIN:ZDB-GENE-040426-2750
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869
HOGENOM:HOG000154062 HSSP:O74036 EMBL:BC052122 IPI:IPI00506696
RefSeq:NP_998577.1 UniGene:Dr.123796 ProteinModelPortal:Q7ZTX4
PRIDE:Q7ZTX4 GeneID:406721 KEGG:dre:406721 InParanoid:Q7ZTX4
NextBio:20818241 ArrayExpress:Q7ZTX4 Bgee:Q7ZTX4 Uniprot:Q7ZTX4
Length = 373
Score = 255 (94.8 bits), Expect = 3.4e-21, P = 3.4e-21
Identities = 80/257 (31%), Positives = 126/257 (49%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGY 92
KL G++A ++L+ + TC ++ T+ L+ + GLS + K
Sbjct: 5 KLRRSGVSADLCERLKRHQLETCQDVLSVTQVELSRLAGLSYPAALNLQRLVSKACAPAV 64
Query: 93 ITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQL 152
IT D L +RK + +T ALD LL GG+ GA+TE G GKTQL L V L
Sbjct: 65 ITALD-LWKRKEELCFSTSLPALDRLLHGGLPRGALTEVTGPSGCGKTQLCMMLSVLATL 123
Query: 153 PTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIY--ARAYTY-EHQYNL 209
P ++ G + V YIDTE F +R+V +A+ + +V + ++ AR + + E
Sbjct: 124 PKSLGGLDSGVIYIDTESAFSAERLVEMAQSRFPEFFSVKERLLEMAARVHLFRELTCQD 183
Query: 210 LLGLAAKMSEEPFR----LLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLTKISE 263
+L ++ E+ L+I+DSV ++ R +F G L R LGQ + L +S+
Sbjct: 184 VLKRLERLEEDIIACRAGLVILDSVASVVRKEFDTSLPGNLTHRSNFLGQEAAVLKYLSQ 243
Query: 264 EFNVAVYMTNQVIADPG 280
EF + V +TNQ+ G
Sbjct: 244 EFCIPVVLTNQITTHVG 260
>MGI|MGI:1099436 [details] [associations]
symbol:Rad51b "RAD51 homolog B" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1099436 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 HOVERGEN:HBG061476 KO:K10869 OMA:CIMMSVL
EMBL:U92068 EMBL:AK015771 EMBL:AK032913 IPI:IPI00331068
IPI:IPI00399712 RefSeq:NP_001239491.1 RefSeq:NP_033040.2
UniGene:Mm.341756 ProteinModelPortal:O35719 SMR:O35719
MINT:MINT-205633 STRING:O35719 PhosphoSite:O35719 PRIDE:O35719
Ensembl:ENSMUST00000079533 GeneID:19363 KEGG:mmu:19363
UCSC:uc007oai.1 UCSC:uc007oaj.1 GeneTree:ENSGT00550000074609
HOGENOM:HOG000154062 InParanoid:O35719 OrthoDB:EOG4G4GQP
NextBio:296429 Bgee:O35719 CleanEx:MM_RAD51L1 Genevestigator:O35719
Uniprot:O35719
Length = 350
Score = 244 (91.0 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 77/263 (29%), Positives = 122/263 (46%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGY 92
KL G++ +L I C + + L + GLS V ++ K
Sbjct: 5 KLRRVGLSPELCDRLSRYQIVNCQHFLSLSPLELMKVTGLSYRGVHELLHTVSKACAPQM 64
Query: 93 ITGSDALLRRKAVIK---ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
T + RR A + ++T ALDE L GG+ G++TE G GKTQ + V
Sbjct: 65 QTAYELKTRRSAHLSPAFLSTTLCALDEALHGGVPCGSLTEITGPPGCGKTQFCIMMSVL 124
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-----FGMDPGAVLDN--IIYARAYT 202
LPT++ G G V YIDTE F +R+V IAE F + +L + + R T
Sbjct: 125 ATLPTSLGGLEGAVVYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCRELT 184
Query: 203 YEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLTK 260
E L L ++ + +L+IVDS+ ++ R +F + G + +R + LG+ S L
Sbjct: 185 CEGLLQRLESLEEEIISKGVKLVIVDSIASVVRKEFDPKLQGNIKERNKFLGKGASLLKY 244
Query: 261 ISEEFNVAVYMTNQVIADPGGGV 283
++ EF++ V +TNQ+ G +
Sbjct: 245 LAGEFSIPVILTNQITTHLSGAL 267
Score = 37 (18.1 bits), Expect = 5.7e-21, Sum P(2) = 5.7e-21
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 294 GHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHI 337
G+ H V RL+ + E+R ++ A + P A SF Y I
Sbjct: 297 GNTWGHCVNTRLILQYLDSERR--QILIAKS-PLAAFTSFVYTI 337
>UNIPROTKB|O15315 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=TAS] [GO:0006310 "DNA
recombination" evidence=TAS] [GO:0007131 "reciprocal meiotic
recombination" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007596 "blood coagulation" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] Reactome:REACT_604
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
GO:GO:0005524 GO:GO:0005654 EMBL:CH471061 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007131 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 MIM:150699 EMBL:U92074 EMBL:U84138 EMBL:Y15571
EMBL:BX161515 EMBL:BX248061 EMBL:BX248766 EMBL:DQ160197
EMBL:AC004518 EMBL:CR536560 EMBL:BC030219 EMBL:AY138857
EMBL:AY138858 EMBL:AY138859 IPI:IPI00006105 IPI:IPI00220523
IPI:IPI00386489 IPI:IPI00386490 IPI:IPI00395987 RefSeq:NP_002868.1
RefSeq:NP_598193.2 RefSeq:NP_598194.1 UniGene:Hs.172587
ProteinModelPortal:O15315 SMR:O15315 IntAct:O15315 MINT:MINT-224850
STRING:O15315 PhosphoSite:O15315 PRIDE:O15315 DNASU:5890
Ensembl:ENST00000390683 Ensembl:ENST00000471583
Ensembl:ENST00000487270 Ensembl:ENST00000488612 GeneID:5890
KEGG:hsa:5890 UCSC:uc001xkd.3 UCSC:uc001xke.3 UCSC:uc001xkf.2
UCSC:uc001xkg.2 UCSC:uc010aqr.3 CTD:5890 GeneCards:GC14P068287
H-InvDB:HIX0022466 HGNC:HGNC:9822 HPA:CAB016191 MIM:602948
neXtProt:NX_O15315 PharmGKB:PA34178 HOVERGEN:HBG061476
InParanoid:O15315 KO:K10869 OMA:CIMMSVL PhylomeDB:O15315
ChiTaRS:RAD51B GenomeRNAi:5890 NextBio:22908 ArrayExpress:O15315
Bgee:O15315 Genevestigator:O15315 Uniprot:O15315
Length = 384
Score = 243 (90.6 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 76/263 (28%), Positives = 121/263 (46%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGY 92
KL G++ +L I TC + + L + GLS V ++ +
Sbjct: 5 KLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRACAPKM 64
Query: 93 ITGSDALLRRKAVIK---ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
T +R A ++T ALDE L GG+ G++TE G GKTQ + +
Sbjct: 65 QTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 124
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-----FGMDPGAVLDN--IIYARAYT 202
LPTNM G G V YIDTE F +R+V IAE F + +L + + R T
Sbjct: 125 ATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELT 184
Query: 203 YEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLTK 260
+ + L ++ + +L+I+DSV ++ R +F + G L +R + L + S L
Sbjct: 185 CDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKY 244
Query: 261 ISEEFNVAVYMTNQVIADPGGGV 283
++EEF++ V +TNQ+ G +
Sbjct: 245 LAEEFSIPVILTNQITTHLSGAL 267
Score = 40 (19.1 bits), Expect = 3.0e-20, Sum P(2) = 3.0e-20
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 294 GHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHI 337
G+ +H+V RL+ + E+R + +P P SF Y I
Sbjct: 297 GNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFT---SFVYTI 337
>UNIPROTKB|C9JYJ0 [details] [associations]
symbol:RAD51B "DNA repair protein RAD51 homolog 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
HGNC:HGNC:9822 ChiTaRS:RAD51B HOGENOM:HOG000154062 EMBL:AL121595
EMBL:AL121820 EMBL:AL122013 EMBL:AL132986 EMBL:AL133313
EMBL:AL133370 EMBL:AL136294 EMBL:AL157915 EMBL:AL589168
IPI:IPI00945688 ProteinModelPortal:C9JYJ0 SMR:C9JYJ0 STRING:C9JYJ0
Ensembl:ENST00000487861 ArrayExpress:C9JYJ0 Bgee:C9JYJ0
Uniprot:C9JYJ0
Length = 425
Score = 243 (90.6 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 76/263 (28%), Positives = 121/263 (46%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGY 92
KL G++ +L I TC + + L + GLS V ++ +
Sbjct: 5 KLKRVGLSQELCDRLSRHQILTCQDFLCLSPLELMKVTGLSYRGVHELLCMVSRACAPKM 64
Query: 93 ITGSDALLRRKAVIK---ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
T +R A ++T ALDE L GG+ G++TE G GKTQ + +
Sbjct: 65 QTAYGIKAQRSADFSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 124
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-----FGMDPGAVLDN--IIYARAYT 202
LPTNM G G V YIDTE F +R+V IAE F + +L + + R T
Sbjct: 125 ATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTSSKVHLYRELT 184
Query: 203 YEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLTK 260
+ + L ++ + +L+I+DSV ++ R +F + G L +R + L + S L
Sbjct: 185 CDEVLQRIESLEEEIISKGIKLVILDSVASVVRKEFDAQLQGNLKERNKFLAREASSLKY 244
Query: 261 ISEEFNVAVYMTNQVIADPGGGV 283
++EEF++ V +TNQ+ G +
Sbjct: 245 LAEEFSIPVILTNQITTHLSGAL 267
Score = 40 (19.1 bits), Expect = 9.1e-20, Sum P(2) = 9.1e-20
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 294 GHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHI 337
G+ +H+V RL+ + E+R + +P P SF Y I
Sbjct: 297 GNTWSHSVNTRLILQYLDSERRQILIAKSPLAPFT---SFVYTI 337
>UNIPROTKB|E1BE93 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5890 KO:K10869 OMA:CIMMSVL
GeneTree:ENSGT00550000074609 EMBL:DAAA02029475 EMBL:DAAA02029476
EMBL:DAAA02029477 EMBL:DAAA02029478 IPI:IPI00729339
RefSeq:NP_001180066.1 UniGene:Bt.25511 Ensembl:ENSBTAT00000025252
GeneID:617007 KEGG:bta:617007 NextBio:20900440 Uniprot:E1BE93
Length = 364
Score = 234 (87.4 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 76/264 (28%), Positives = 122/264 (46%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKV-EKIC---EAAEKIV 88
KL G++ +L I TC + + L + GLS V E +C A +
Sbjct: 19 KLRRVGLSQELCDRLNRHQIVTCQDFLCLSPLELMKMTGLSYQGVHELLCLVSRACAPQM 78
Query: 89 NFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCV 148
Y + + TT S ALDE L GG+ G++TE G GKTQ + +
Sbjct: 79 QTAYEIKTQRCAAHSSAFLSTTLS-ALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSI 137
Query: 149 CTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-----FGMDPGAVLDN--IIYARAY 201
LPTNM G G V YIDTE F +R+V IAE F + +L + + R
Sbjct: 138 LATLPTNMGGLEGAVVYIDTESAFSAERLVEIAESRFPRYFDTEEKLLLTSSKVHLYREL 197
Query: 202 TYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLT 259
+ + + L ++ + +L+I+DSV ++ R +F + G + +R + L + + L
Sbjct: 198 SCDEVLQRIESLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNVRERNKFLAREAASLK 257
Query: 260 KISEEFNVAVYMTNQVIADPGGGV 283
++EEF++ V +TNQ+ G +
Sbjct: 258 YLAEEFSIPVILTNQITTHLSGAL 281
Score = 38 (18.4 bits), Expect = 7.2e-19, Sum P(2) = 7.2e-19
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 294 GHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLP 326
G+ +H+V RL+ + E+R + +P P
Sbjct: 311 GNTWSHSVNTRLILQYLGSERRQILIAKSPLAP 343
>RGD|1560681 [details] [associations]
symbol:Rad51b "RAD51 homolog B (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1560681
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
OrthoDB:EOG4G4GQP IPI:IPI00367665 Ensembl:ENSRNOT00000016459
UCSC:RGD:1560681 Uniprot:D4A4Y7
Length = 258
Score = 219 (82.2 bits), Expect = 7.6e-18, P = 7.6e-18
Identities = 74/249 (29%), Positives = 114/249 (45%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGY 92
KL G++ +L I C + + L + GLS V ++ K
Sbjct: 5 KLRRAGLSQELCDRLCRYQIVNCQDFLNLSPLELMKVTGLSYRGVHELLHTVSKACAPQM 64
Query: 93 ITGSDALLRRKAVIK---ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
T + RR A + ++T ALDE L GG+ G++TE G GKTQ + V
Sbjct: 65 QTAYELKTRRSAHLSPAFLSTTLGALDEALHGGVPCGSLTEVTGPPGCGKTQFCIMMSVL 124
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-----FGMDPGAVLDN--IIYARAYT 202
LPT + G G V YIDTE F +R+V IAE F + +L + + + T
Sbjct: 125 ATLPTRLGGLEGAVLYIDTESAFTAERLVEIAESRFPQYFNTEEKLLLTSSRVHLCQELT 184
Query: 203 YEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLTK 260
E L L ++ + +L+IVDS+ ++ R +F + G + +R + LG+ S L
Sbjct: 185 CEGLLQRLESLEEEIISKGVKLVIVDSIASVVRKEFDPQLQGNIKERNKFLGKGASLLKY 244
Query: 261 ISEEFNVAV 269
+S EF+V V
Sbjct: 245 LSGEFSVPV 253
>UNIPROTKB|E1BVI8 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 OMA:CIMMSVL GeneTree:ENSGT00550000074609
EMBL:AADN02003180 IPI:IPI00812156 Ensembl:ENSGALT00000015453
Uniprot:E1BVI8
Length = 275
Score = 210 (79.0 bits), Expect = 8.3e-17, P = 8.3e-17
Identities = 69/237 (29%), Positives = 110/237 (46%)
Query: 45 KKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRK- 103
++L I TC + + L + G S V+K+ T + +RR
Sbjct: 17 ERLSRYQITTCQDFLCLSLLELMKVTGESYRNVQKLLRKVSLACAPKMQTAYEMKVRRSI 76
Query: 104 --AVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNG 161
+ + T +LD++L GGI G++TE GKTQ T+ V LP +M G +G
Sbjct: 77 NPSAAFLPTSLHSLDKVLHGGIPCGSLTELTSPPGCGKTQFCITMSVLATLPVSMGGLDG 136
Query: 162 KVAYIDTEGTFRPDRIVPIA-ERFG--MDPGAVL----DNIIYARAYTYEHQYNLLLGLA 214
V YIDTE F +R++ IA RF D L +I R T + + L
Sbjct: 137 AVIYIDTESAFSAERLIEIAGNRFPTYFDSDEKLFCMTRSIHLYRELTCDSVLKRIKSLE 196
Query: 215 AKMSEEPFRLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLTKISEEFNVAV 269
++ + +L+I+DSV ++ R +F + G LA+R L + S L ++EEF++ V
Sbjct: 197 EEIISKKIKLIIIDSVASVVRKEFDTKLQGNLAERSNFLARGASLLKYVAEEFSIPV 253
>TAIR|locus:2174577 [details] [associations]
symbol:XRCC3 "homolog of X-ray repair cross complementing
3" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003684 "damaged DNA binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006281 "DNA repair" evidence=ISS] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006302 "double-strand break repair"
evidence=RCA;IMP] [GO:0007126 "meiosis" evidence=IMP] [GO:0000724
"double-strand break repair via homologous recombination"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0010212 "response to
ionizing radiation" evidence=RCA] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045132
"meiotic chromosome segregation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0045003 "double-strand break repair via synthesis-dependent
strand annealing" evidence=IDA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003697 GO:GO:0045003 EMBL:AB011482
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AB062455 EMBL:AB073492
EMBL:AJ438908 EMBL:AJ438909 EMBL:AY032998 IPI:IPI00533166
RefSeq:NP_200554.1 RefSeq:NP_851202.1 UniGene:At.26227
UniGene:At.67214 ProteinModelPortal:Q9FKM5 SMR:Q9FKM5 STRING:Q9FKM5
EnsemblPlants:AT5G57450.1 EnsemblPlants:AT5G57450.2 GeneID:835850
KEGG:ath:AT5G57450 GeneFarm:4801 TAIR:At5g57450
HOGENOM:HOG000239162 InParanoid:Q9FKM5 KO:K10880 OMA:YSPETPN
PhylomeDB:Q9FKM5 ProtClustDB:CLSN2687414 Genevestigator:Q9FKM5
GermOnline:AT5G57450 Uniprot:Q9FKM5
Length = 304
Score = 217 (81.4 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 58/191 (30%), Positives = 97/191 (50%)
Query: 99 LLRRKAVI-KITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMR 157
LLRR K+TTG + LD L GGI ++TE E GKTQL L +CTQLP +
Sbjct: 11 LLRRSPTNRKLTTGCEILDGCLRGGISCDSLTEIVAESGCGKTQLCLQLSLCTQLPISHG 70
Query: 158 GGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVL--------DNIIYARAYTYEHQYNL 209
G NG Y+ +E F R+ ++ F ++ D++ ++ +H +++
Sbjct: 71 GLNGSSLYLHSEFPFPFRRLHQLSHTFHQSNPSIYANYNDNPCDHVFVQNVHSVDHLFDI 130
Query: 210 LL---GLAAKMSEE-PFRLLIVDSVIALFRVDFTGR-GELADRQQKLGQMLSRLTKISEE 264
+ G P +L+++DSV ALFR +F +L R ++ +L +++ +
Sbjct: 131 MPRIDGFVGNSKTRFPLKLIVLDSVAALFRSEFDNTPSDLKKRSSLFFKISGKLKQLASK 190
Query: 265 FNVAVYMTNQV 275
F++A+ +TNQV
Sbjct: 191 FDLAIVITNQV 201
>UNIPROTKB|E2R3P3 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:AAEX03005799
Ensembl:ENSCAFT00000026122 Uniprot:E2R3P3
Length = 272
Score = 207 (77.9 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 75/253 (29%), Positives = 116/253 (45%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKV-EKIC---EAAEKIV 88
KL G++ +L I TC + + L + GLS V E +C A +
Sbjct: 5 KLRRVGLSQELCDRLNRYQIVTCQDFLCLSPLELMKMTGLSYKGVHELLCMVSRACAPKM 64
Query: 89 NFGYITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCV 148
Y + TT S ALDE L GG+ G++TE G GKTQ + +
Sbjct: 65 QTAYRIKMETSASLLPAFLATTLS-ALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSI 123
Query: 149 CTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-----FGMDPGAVLDNIIYARAYTY 203
LPTNM G G V YIDTE F +R+V IAE F + +L + ++ + Y
Sbjct: 124 LATLPTNMGGLEGDVVYIDTESAFSAERLVEIAESRFPRYFNTEEKLLLTS---SKVHLY 180
Query: 204 -EHQYNLLLGLAAKMSEEPF----RLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLS 256
E + +L + EE +L+I+DSV ++ R +F + G + +R + L + +
Sbjct: 181 RELSCDAVLQRIESLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAA 240
Query: 257 RLTKISEEFNVAV 269
L ++EEF++ V
Sbjct: 241 SLKYLAEEFSIPV 253
>UNIPROTKB|E1BRQ1 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 EMBL:AADN02025794 IPI:IPI00602048
ProteinModelPortal:E1BRQ1 Ensembl:ENSGALT00000008107 Uniprot:E1BRQ1
Length = 369
Score = 144 (55.7 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 34/74 (45%), Positives = 41/74 (55%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGG++ ITE G GKTQL L V Q+P G G+ +ID
Sbjct: 91 IITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 150
Query: 168 TEGTFRPDRIVPIA 181
TEG+F DR IA
Sbjct: 151 TEGSFMVDRAADIA 164
Score = 122 (48.0 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 48/173 (27%), Positives = 80/173 (46%)
Query: 182 ERFGMDPGAVLDNIIYARAYTYEH---QYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDF 238
E F ++ ++L +I Y R Y Q LL ++ S+ RL+++D + FR DF
Sbjct: 188 ETFSLE--SILSHIYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDF 245
Query: 239 TGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLA 298
+L+ R + L + +L I+ + AV +TNQ+ G PA G
Sbjct: 246 E---DLSLRTRLLNGLAQQLIIIANDHKSAVVLTNQMTTRFGQN---QSMLVPALGESWG 299
Query: 299 HAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAK 351
HA T+RL+F QR+ ++ +P+ E+ + Y+I TP G D +
Sbjct: 300 HAATVRLIFH-WDNTQRLATLYKSPSQKES---TIPYNI-----TPQGFRDVQ 343
>UNIPROTKB|F1NUE9 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0007066 "female meiosis sister chromatid
cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007131 GO:GO:0007141 GO:GO:0008821
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0007066 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:AADN02025794 IPI:IPI00820436
Ensembl:ENSGALT00000039328 Uniprot:F1NUE9
Length = 373
Score = 144 (55.7 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 34/74 (45%), Positives = 41/74 (55%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGG++ ITE G GKTQL L V Q+P G G+ +ID
Sbjct: 96 IITFCSALDNILGGGVQLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 155
Query: 168 TEGTFRPDRIVPIA 181
TEG+F DR IA
Sbjct: 156 TEGSFMVDRAADIA 169
Score = 122 (48.0 bits), Expect = 8.6e-16, Sum P(2) = 8.6e-16
Identities = 48/173 (27%), Positives = 80/173 (46%)
Query: 182 ERFGMDPGAVLDNIIYARAYTYEH---QYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDF 238
E F ++ ++L +I Y R Y Q LL ++ S+ RL+++D + FR DF
Sbjct: 193 ETFSLE--SILSHIYYFRCRDYIELLAQVYLLPDFLSEHSKIEVRLVVIDGIAFPFRHDF 250
Query: 239 TGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLA 298
+L+ R + L + +L I+ + AV +TNQ+ G PA G
Sbjct: 251 E---DLSLRTRLLNGLAQQLIIIANDHKSAVVLTNQMTTRFGQN---QSMLVPALGESWG 304
Query: 299 HAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIADAK 351
HA T+RL+F QR+ ++ +P+ E+ + Y+I TP G D +
Sbjct: 305 HAATVRLIFH-WDNTQRLATLYKSPSQKES---TIPYNI-----TPQGFRDVQ 348
>UNIPROTKB|F1S9W9 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:INQVTEA
EMBL:CU694215 Ensembl:ENSSSCT00000002829 Uniprot:F1S9W9
Length = 347
Score = 216 (81.1 bits), Expect = 9.1e-16, P = 9.1e-16
Identities = 82/270 (30%), Positives = 124/270 (45%)
Query: 66 LTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVI-----KITTGSQALDELLG 120
L + GLS V+ + A + G ++ + L R++ +++ G LD LL
Sbjct: 36 LQRLTGLSGPDVQHLLRAVSSHLRGGSVSTALQLYRQEEEFPEQHQRLSLGCPVLDGLLR 95
Query: 121 GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRG-GNGKVAYIDTEGTF---RPDR 176
GG+ ITE G +GKTQLA LC+ QLP G G G V Y+ TEG F R +
Sbjct: 96 GGLPLDGITELAGRSSTGKTQLALQLCLAVQLPRQHGGLGTGAV-YVCTEGAFPSRRLQQ 154
Query: 177 IVPIAERFGMD-PGAVLDNIIYARAYTYEH--QYNLLLGLAAK-----MSEEPFRLLIVD 228
+V + D PG VL I + EH + LL ++ +S RLL++D
Sbjct: 155 LVAQQQLLRPDVPGDVLGKIKFGDQIFVEHVADVDTLLDCVSRKVPVLLSRGVARLLVID 214
Query: 229 SVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVI----ADPGGGVF 284
SV A FR +F G + A R ++L + + L ++S F V NQV A G
Sbjct: 215 SVAAPFRCEFAG-ADSARRARRLQALGAELRRLSCAFRSPVLCINQVTEAVDAHEAAGAG 273
Query: 285 ISDPKKPAGGHVLAHAVTIRLMFRKGKGEQ 314
+ PA G + + +RL+ + + E+
Sbjct: 274 -GERTSPALGITWSSQLLMRLLMDRRRPEE 302
>UNIPROTKB|F1PMI7 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008821 "crossover junction endodeoxyribonuclease
activity" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:AAEX03006577
EMBL:AAEX03006578 EMBL:AAEX03006579 Ensembl:ENSCAFT00000027833
Uniprot:F1PMI7
Length = 368
Score = 216 (81.1 bits), Expect = 1.3e-15, P = 1.3e-15
Identities = 82/267 (30%), Positives = 121/267 (45%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGGI TE G GKTQL L V Q+P G G+ +ID
Sbjct: 93 IITFCSALDNILGGGIPLTKTTEICGVPGVGKTQLCMQLAVDVQIPECFGGVEGEAVFID 152
Query: 168 TEGTFRPDRIVPIA------------ERFGMDPGAVLDNI----IYARAYTYE-HQYNLL 210
TEG+F DR+V +A G + L++ I + Y + Y L
Sbjct: 153 TEGSFMVDRVVDLATACIQHLHLIAGRHMGEEHSKALEDFTLENILSHIYYFRCRDYTEL 212
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L +SE RL+IVD + FR D +L+ R + L + ++ ++
Sbjct: 213 LAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLRTRLLNGLAQQMISLANNH 269
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + + PA G HA TIRL+F + +QR+ ++ +P
Sbjct: 270 RLAVLLTNQMTTKIDRNQALLV-----PALGESWGHAATIRLIFHWDQ-KQRLATLYKSP 323
Query: 324 NLPEAEAISFSYHIILIKITPGGIADA 350
+ E+ +L +ITP G DA
Sbjct: 324 SQKEST--------VLFQITPQGFRDA 342
>MGI|MGI:2150020 [details] [associations]
symbol:Rad51c "RAD51 homolog C" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=ISO] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0048476 "Holliday junction resolvase complex" evidence=IC]
InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:2150020 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0007283 EMBL:CH466556 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 GO:GO:0048476
EMBL:AL596130 GeneTree:ENSGT00550000074609 HSSP:O74036 CTD:5889
HOVERGEN:HBG055764 KO:K10870 OMA:QRDLVSF OrthoDB:EOG4CRM09
EMBL:AF324883 EMBL:AK076551 EMBL:CU406989 EMBL:CU406969
EMBL:AL669902 EMBL:BC090648 EMBL:BC141034 IPI:IPI00125672
IPI:IPI00226086 RefSeq:NP_444499.1 UniGene:Mm.37376
ProteinModelPortal:Q924H5 SMR:Q924H5 STRING:Q924H5 PRIDE:Q924H5
Ensembl:ENSMUST00000007790 Ensembl:ENSMUST00000067692 GeneID:114714
KEGG:mmu:114714 UCSC:uc007ktp.2 InParanoid:Q5SX32 NextBio:368733
Bgee:Q924H5 Genevestigator:Q924H5 Uniprot:Q924H5
Length = 366
Score = 215 (80.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 83/267 (31%), Positives = 122/267 (45%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGGI TE G GKTQL L V Q+P G G+ +ID
Sbjct: 91 IITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 150
Query: 168 TEGTFRPDRIVPIA----ERFGMDPGA-------------VLDNIIYARAYTYEHQYNLL 210
TEG+F DR+V +A + + G L+NI+ Y H Y L
Sbjct: 151 TEGSFMVDRVVSLATACIQHLHLIAGTHTEEEHQKALKDFTLENILSHIYYFRCHDYTEL 210
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L +S+ P +L+I+D + FR D +L+ R + L + ++ ++
Sbjct: 211 LAQVYLLPDFLSDHPKVQLVIIDGIAFPFRHDLE---DLSLRTRLLNGLAQQMISLANNH 267
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + + PA G HA TIRL+F + +QR ++ +P
Sbjct: 268 RLAVILTNQMTTKIDKNQALLV-----PALGESWGHAATIRLIFH-WEQKQRFATLYKSP 321
Query: 324 NLPEAEAISFSYHIILIKITPGGIADA 350
+ E+ I F +ITP G DA
Sbjct: 322 SQKES-TIPF-------QITPQGFRDA 340
>UNIPROTKB|F1MW99 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0007283 GO:GO:0007131
GO:GO:0007141 GO:GO:0008821 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066
GeneTree:ENSGT00550000074609 OMA:QRDLVSF EMBL:DAAA02048323
IPI:IPI00713775 Ensembl:ENSBTAT00000020012 Uniprot:F1MW99
Length = 382
Score = 215 (80.7 bits), Expect = 2.0e-15, P = 2.0e-15
Identities = 84/267 (31%), Positives = 124/267 (46%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGGI TE G GKTQL L + Q+P G G+ +ID
Sbjct: 101 IITFCSALDNILGGGIPLTKTTEICGAPGVGKTQLCMQLAIDVQIPECFGGVEGEAVFID 160
Query: 168 TEGTFRPDRIVPIAERF--------G--MD---PGAV----LDNIIYARAYTYEHQYNLL 210
TEG+F DR+V +A G M+ P A+ L+NI+ Y Y L
Sbjct: 161 TEGSFMVDRVVDLATACIQHLQLIAGTHMEEEHPKALQDFTLENILSHIYYFRCRDYTEL 220
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L+ +SE RL+IVD + FR D +L+ R + L + ++ ++
Sbjct: 221 LAQVYLLSDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLRTRLLNGLAQQMISLANNH 277
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + + PA G HA TIRL+F + + R+ ++ +P
Sbjct: 278 RLAVILTNQMTTKFDRNQALLV-----PALGESWGHAATIRLIFHWDQKQSRLATLYKSP 332
Query: 324 NLPEAEAISFSYHIILIKITPGGIADA 350
+ E+ + F +ITP G DA
Sbjct: 333 SQKES-TVPF-------QITPQGFRDA 351
>UNIPROTKB|F1SA21 [details] [associations]
symbol:RAD51B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
OMA:CIMMSVL GeneTree:ENSGT00550000074609 EMBL:CT797462
Ensembl:ENSSSCT00000002560 Uniprot:F1SA21
Length = 252
Score = 197 (74.4 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 66/247 (26%), Positives = 112/247 (45%)
Query: 33 KLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGY 92
KL G++ +L I TC + + L + GLS V + +
Sbjct: 5 KLRRVGLSQELCDRLNRHHIITCQDFLCLSPLELMKMTGLSYQGVHDLLCLVSRACAPPM 64
Query: 93 ITGSDALLRRKAVIK---ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVC 149
T + +R AV ++T ALDE L GG+ G++TE G GKTQ + +
Sbjct: 65 QTAYEIKTQRSAVPSPAFLSTTLSALDEALHGGVACGSLTEITGPPGCGKTQFCIMMSIL 124
Query: 150 TQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-----FGMDPGAVL--DNIIYARAYT 202
LP +M G G V YIDTE F +R+V +AE F + +L + R +
Sbjct: 125 ATLPIDMGGLEGAVVYIDTESAFSAERLVEMAESRFPRYFSTEEKLLLTVSKVHLYRELS 184
Query: 203 YEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGR--GELADRQQKLGQMLSRLTK 260
+ + L ++ + +L+I+DSV ++ R +F + G + +R + L + + L
Sbjct: 185 CDEVLQRIESLEEEIISKGVKLVIIDSVASVVRKEFDTQLQGNMRERNKFLAREAASLKY 244
Query: 261 ISEEFNV 267
++EEF++
Sbjct: 245 LAEEFSI 251
>UNIPROTKB|Q08DH8 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISS] [GO:0005759 "mitochondrial matrix" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 EMBL:BC123742 IPI:IPI00717766 RefSeq:NP_001071585.1
UniGene:Bt.41484 ProteinModelPortal:Q08DH8 STRING:Q08DH8
PRIDE:Q08DH8 Ensembl:ENSBTAT00000013145 GeneID:768244
KEGG:bta:768244 CTD:7517 HOVERGEN:HBG054179 InParanoid:Q08DH8
OMA:INQVTEA OrthoDB:EOG47D9GS NextBio:20918540 Uniprot:Q08DH8
Length = 341
Score = 211 (79.3 bits), Expect = 3.4e-15, P = 3.4e-15
Identities = 78/262 (29%), Positives = 121/262 (46%)
Query: 72 LSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVI-----KITTGSQALDELLGGGIETG 126
LS V+ + A+ ++ + + LLR++ +++ G LD LL GG+
Sbjct: 41 LSSPDVQLLLRASASLLRGHGVCTALHLLRQEGPFPEQHQRLSLGCPVLDALLRGGLPLD 100
Query: 127 AITEAFGEFRSGKTQLAHTLCVCTQLPTNMRG-GNGKVAYIDTEGTF---RPDRIVPIAE 182
ITE G +GKTQLA LC+ QLP G G G V Y+ TE F R +++ +
Sbjct: 101 GITELAGRSSAGKTQLALQLCLAVQLPPRHGGLGAGAV-YVCTEDAFPSRRLQQLIAQQQ 159
Query: 183 RFGMD-PGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPF-------RLLIVDSVIALF 234
R D PG V+ I + EH ++ L + P RL+++DSV A F
Sbjct: 160 RLRADVPGHVISKIRFGHQIFIEHAADVDTLLQCVREKVPVLLARGMARLVVIDSVAAPF 219
Query: 235 RVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPK--KPA 292
R +F G LA R Q+L + + L ++S F V NQV ++ P PA
Sbjct: 220 RCEFDGAA-LALRAQRLLALGAELRRLSCAFRSPVLCVNQVTEAVEEQDLVAGPPGMSPA 278
Query: 293 GGHVLAHAVTIRLMFRKGKGEQ 314
G A+ + +RL+ + + E+
Sbjct: 279 LGITWANQLLVRLLADRQRPEE 300
>DICTYBASE|DDB_G0283637 [details] [associations]
symbol:xrcc3 "putative DNA repair protein XRCC3"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
dictyBase:DDB_G0283637 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0003677
GO:GO:0006310 GO:GO:0006302 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 RefSeq:XP_638929.1
ProteinModelPortal:Q54QU4 EnsemblProtists:DDB0232275 GeneID:8624168
KEGG:ddi:DDB_G0283637 InParanoid:Q54QU4 Uniprot:Q54QU4
Length = 564
Score = 149 (57.5 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 106 IKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAY 165
IK++TG + +D+ LGGGI ITE GE SGKTQL L + QLP M G NG Y
Sbjct: 165 IKLSTGCKIMDKCLGGGISPIGITEIAGESGSGKTQLCIQLSLQVQLPFEMGGLNGACLY 224
Query: 166 IDTEGTFRPDRI 177
I TE F R+
Sbjct: 225 ITTEPPFPTKRL 236
Score = 115 (45.5 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 27/93 (29%), Positives = 52/93 (55%)
Query: 185 GMDPGAVLDNIIYARAYTYEHQYNLLLG-LAAKMSEEPFRLLIVDSVIALFRVDFTG-RG 242
G+ P LDNI T + +LL+ + + ++ RLLI+DS+ AL R ++ +
Sbjct: 277 GVSP---LDNIFIQSTTTIDSLMDLLINQITGYLEKKTIRLLIIDSIAALLRHEYGNEKS 333
Query: 243 ELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV 275
E+ ++ + L + +RL I+E++ + + + NQV
Sbjct: 334 EIIEKTKLLWSLANRLKLINEQYGITIVVVNQV 366
>UNIPROTKB|Q8R2J9 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:10029 "Cricetulus griseus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0007062 "sister chromatid cohesion" evidence=IMP]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISS]
InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0003677 GO:GO:0006281
GO:GO:0006310 GO:GO:0008094 GO:GO:0007062 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AJ413202
EMBL:AJ428572 RefSeq:NP_001231005.1 HSSP:O74036
ProteinModelPortal:Q8R2J9 GeneID:100689078 CTD:5889
HOVERGEN:HBG055764 Uniprot:Q8R2J9
Length = 366
Score = 207 (77.9 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 81/267 (30%), Positives = 118/267 (44%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGGI TE G GKTQL L V Q+P G G+ +ID
Sbjct: 91 IITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 150
Query: 168 TEGTFRPDRIVPIA-----------------ERFGMDPGAVLDNIIYARAYTYEHQYNLL 210
TEG+F DR+V +A E G L+NI+ Y H Y L
Sbjct: 151 TEGSFMVDRVVTLANACIQHLHLIAGTHKDEEHQKALEGFTLENILSHIYYFRCHDYTEL 210
Query: 211 LGLAAKMSE-----EPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L + + +L+I+D + FR D +L+ R + L + ++ ++
Sbjct: 211 LAQVYLLPDFLSNHSKVQLVIIDGIALPFRHDLD---DLSLRTRLLNGLAQQMISLANNH 267
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + + PA G HA TIRL+F + +QR ++ +P
Sbjct: 268 RLAVILTNQMTTKIDKNQALLV-----PALGESWGHAATIRLIFH-WEQKQRFATLYKSP 321
Query: 324 NLPEAEAISFSYHIILIKITPGGIADA 350
+ E+ I F +ITP G DA
Sbjct: 322 SQKES-TIPF-------QITPQGFRDA 340
Score = 38 (18.4 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 6 KAEEQSQLQLVEREDIDDE 24
K E LQ+V RE + D+
Sbjct: 45 KEEALETLQIVRRESLTDK 63
>UNIPROTKB|J3QKK3 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 EMBL:AC025521 EMBL:AC011195
HGNC:HGNC:9820 ProteinModelPortal:J3QKK3 Ensembl:ENST00000583539
Uniprot:J3QKK3
Length = 346
Score = 206 (77.6 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 80/257 (31%), Positives = 118/257 (45%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD++LGGG+ TE G GKTQL L V Q+P G G+ +ID
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 159
Query: 168 TEGTFRPDRIVP-----------IAERF-GMD-----PGAVLDNIIYARAYTYEHQYNLL 210
TEG+F DR+V IAE+ G + LDNI+ Y Y L
Sbjct: 160 TEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTEL 219
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L +SE RL+IVD + FR D +L+ R + L + ++ ++
Sbjct: 220 LAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLRTRLLNGLAQQMISLANNH 276
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + + PA G HA TIRL+F + +QR+ ++ +P
Sbjct: 277 RLAVILTNQMTTKIDRNQALLV-----PALGESWGHAATIRLIFHWDR-KQRLATLYKSP 330
Query: 324 NLPEAEAISFSYHIILI 340
+ E + F + +I
Sbjct: 331 SQKECTVL-FQIKVSII 346
Score = 146 (56.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 49/166 (29%), Positives = 76/166 (45%)
Query: 28 FEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEK- 86
FE L+S ++ KL AG T L+ L+ G+S+A+ + + +
Sbjct: 8 FEMQRDLVSFPLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRE 67
Query: 87 -IVNFGYITGSDALLRRKAVIKI-----TTG-----SQALDELLGGGIETGAITEAFGEF 135
+ N G+ ++ +++ T G ALD++LGGG+ TE G
Sbjct: 68 CLTNKPRYAGTSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAP 127
Query: 136 RSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 181
GKTQL L V Q+P G G+ +IDTEG+F DR+V +A
Sbjct: 128 GVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
>UNIPROTKB|O43502 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IDA] [GO:0006310
"DNA recombination" evidence=IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007596 "blood
coagulation" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] Reactome:REACT_604 InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005739
GO:GO:0005524 GO:GO:0048471 GO:GO:0005654 GO:GO:0003677
GO:GO:0007596 GO:GO:0006281 GO:GO:0007283 GO:GO:0006310
EMBL:CH471109 GO:GO:0007131 Orphanet:145 Orphanet:84 GO:GO:0007141
GO:GO:0008821 GO:GO:0008094 GO:GO:0007062 eggNOG:COG0468
HOGENOM:HOG000227426 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GO:GO:0007066 EMBL:AC025521 CTD:5889
HOVERGEN:HBG055764 KO:K10870 EMBL:AF029669 EMBL:AF029670
EMBL:AY623112 EMBL:AC011195 EMBL:BC107753 IPI:IPI00012829
IPI:IPI00040453 RefSeq:NP_002867.1 RefSeq:NP_478123.1
UniGene:Hs.412587 ProteinModelPortal:O43502 SMR:O43502
IntAct:O43502 MINT:MINT-204767 STRING:O43502 PhosphoSite:O43502
PRIDE:O43502 DNASU:5889 Ensembl:ENST00000337432
Ensembl:ENST00000421782 GeneID:5889 KEGG:hsa:5889 UCSC:uc002iwu.3
GeneCards:GC17P056769 HGNC:HGNC:9820 MIM:602774 MIM:613390
MIM:613399 neXtProt:NX_O43502 PharmGKB:PA34177 InParanoid:O43502
OMA:QRDLVSF OrthoDB:EOG4CRM09 PhylomeDB:O43502 GenomeRNAi:5889
NextBio:22902 ArrayExpress:O43502 Bgee:O43502 CleanEx:HS_RAD51C
Genevestigator:O43502 GermOnline:ENSG00000108384 Uniprot:O43502
Length = 376
Score = 206 (77.6 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 83/266 (31%), Positives = 120/266 (45%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD++LGGG+ TE G GKTQL L V Q+P G G+ +ID
Sbjct: 100 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 159
Query: 168 TEGTFRPDRIVP-----------IAERF-GMD-----PGAVLDNIIYARAYTYEHQYNLL 210
TEG+F DR+V IAE+ G + LDNI+ Y Y L
Sbjct: 160 TEGSFMVDRVVDLATACIQHLQLIAEKHKGEEHRKALEDFTLDNILSHIYYFRCRDYTEL 219
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L +SE RL+IVD + FR D +L+ R + L + ++ ++
Sbjct: 220 LAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHDLD---DLSLRTRLLNGLAQQMISLANNH 276
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + + PA G HA TIRL+F + +QR+ ++ +P
Sbjct: 277 RLAVILTNQMTTKIDRNQALLV-----PALGESWGHAATIRLIFHWDR-KQRLATLYKSP 330
Query: 324 NLPEAEAISFSYHIILIKITPGGIAD 349
+ E +L +I P G D
Sbjct: 331 SQKECT--------VLFQIKPQGFRD 348
Score = 146 (56.5 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 49/166 (29%), Positives = 76/166 (45%)
Query: 28 FEAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEK- 86
FE L+S ++ KL AG T L+ L+ G+S+A+ + + +
Sbjct: 8 FEMQRDLVSFPLSPAVRVKLVSAGFQTAEELLEVKPSELSKEVGISKAEALETLQIIRRE 67
Query: 87 -IVNFGYITGSDALLRRKAVIKI-----TTG-----SQALDELLGGGIETGAITEAFGEF 135
+ N G+ ++ +++ T G ALD++LGGG+ TE G
Sbjct: 68 CLTNKPRYAGTSESHKKCTALELLEQEHTQGFIITFCSALDDILGGGVPLMKTTEICGAP 127
Query: 136 RSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 181
GKTQL L V Q+P G G+ +IDTEG+F DR+V +A
Sbjct: 128 GVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLA 173
>SGD|S000002411 [details] [associations]
symbol:RAD57 "Protein that stimulates strand exchange"
species:4932 "Saccharomyces cerevisiae" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0033062 "Rhp55-Rhp57
complex" evidence=IDA] [GO:0000730 "DNA recombinase assembly"
evidence=IPI] [GO:0000722 "telomere maintenance via recombination"
evidence=IMP] [GO:0045002 "double-strand break repair via
single-strand annealing" evidence=IMP] [GO:0000707 "meiotic DNA
recombinase assembly" evidence=IMP] [GO:0030491 "heteroduplex
formation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
SGD:S000002411 GO:GO:0005524 GO:GO:0003677 EMBL:BK006938
EMBL:Z48008 GO:GO:0000722 GO:GO:0008094 eggNOG:COG0468
GO:GO:0000707 InterPro:IPR013632 Pfam:PF08423 GO:GO:0030491
GO:GO:0033062 KO:K10958 OrthoDB:EOG4HTD1G EMBL:M65061 PIR:JQ1275
RefSeq:NP_010287.1 ProteinModelPortal:P25301 SMR:P25301
DIP:DIP-4774N IntAct:P25301 MINT:MINT-480305 STRING:P25301
EnsemblFungi:YDR004W GeneID:851567 KEGG:sce:YDR004W CYGD:YDR004w
HOGENOM:HOG000141828 OMA:YITTEGD NextBio:969013
Genevestigator:P25301 GermOnline:YDR004W Uniprot:P25301
Length = 460
Score = 208 (78.3 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 56/175 (32%), Positives = 87/175 (49%)
Query: 109 TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDT 168
TT A+DELLGGGI T ITE FGE +GK+QL L + QL G GK YI T
Sbjct: 101 TTADVAMDELLGGGIFTHGITEIFGESSTGKSQLLMQLALSVQLSEPAGGLGGKCVYITT 160
Query: 169 EGTFRPDRIV------PIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPF 222
EG R+ P E+ G+ + + EH N+ L + + S+
Sbjct: 161 EGDLPTQRLESMLSSRPAYEKLGITQSNIF-TVSCNDLINQEHIINVQLPILLERSKGSI 219
Query: 223 RLLIVDSVIALFRVDFTGRG--ELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV 275
+L+I+DS+ RV+ + E + + L +M +L ++ +++++V + NQV
Sbjct: 220 KLVIIDSISHHLRVELQNKSFRESQENKNYLDRMAEKLQILAHDYSLSVVVANQV 274
>UNIPROTKB|F1M525 [details] [associations]
symbol:Rad51c "Protein Rad51c" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 IPI:IPI00951574 Ensembl:ENSRNOT00000065976
ArrayExpress:F1M525 Uniprot:F1M525
Length = 336
Score = 203 (76.5 bits), Expect = 3.1e-14, P = 3.1e-14
Identities = 82/267 (30%), Positives = 120/267 (44%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGGI TE G GKTQL L V Q+P G G+ +ID
Sbjct: 61 IITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 120
Query: 168 TEGTFRPDRIVPIA----ERFGMDPGA-------------VLDNIIYARAYTYEHQYNLL 210
TEG+F DR+V +A + + G L+NI+ Y H Y L
Sbjct: 121 TEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENILSHIYYFRCHDYTEL 180
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L +S+ +L+I+D + FR D +L R + L + +L ++ +
Sbjct: 181 LAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLD---DLFLRTRLLNGLAQQLISLANKH 237
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + PA G HA TIRL+F + +QR ++ +P
Sbjct: 238 RLAVILTNQMTTKIDKNQASLV-----PALGESWGHAATIRLIFH-WEQKQRFATLYKSP 291
Query: 324 NLPEAEAISFSYHIILIKITPGGIADA 350
+ E+ + F +ITP G DA
Sbjct: 292 SQKES-TVPF-------QITPQGFRDA 310
>RGD|1563765 [details] [associations]
symbol:Rad51c "Rad51 homolog c (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739
"mitochondrion" evidence=IEA;ISO] [GO:0006281 "DNA repair"
evidence=IEA;ISO] [GO:0006310 "DNA recombination" evidence=ISO]
[GO:0007066 "female meiosis sister chromatid cohesion"
evidence=IEA;ISO] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA;ISO] [GO:0007141 "male meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=IEA;ISO] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008821
"crossover junction endodeoxyribonuclease activity"
evidence=IEA;ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] InterPro:IPR020588 PROSITE:PS50162 RGD:1563765
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 CTD:5889 KO:K10870
OMA:QRDLVSF RefSeq:NP_001123249.1 UniGene:Rn.160309
Ensembl:ENSRNOT00000008846 GeneID:497976 KEGG:rno:497976
NextBio:698267 Uniprot:G3V6U0
Length = 366
Score = 203 (76.5 bits), Expect = 4.7e-14, P = 4.7e-14
Identities = 82/267 (30%), Positives = 120/267 (44%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGGI TE G GKTQL L V Q+P G G+ +ID
Sbjct: 91 IITFCSALDNILGGGIPLMKTTEVCGVPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 150
Query: 168 TEGTFRPDRIVPIA----ERFGMDPGA-------------VLDNIIYARAYTYEHQYNLL 210
TEG+F DR+V +A + + G L+NI+ Y H Y L
Sbjct: 151 TEGSFMVDRVVSLATACIQHLHLIAGTHTEEEQQKALKDFTLENILSHIYYFRCHDYTEL 210
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L +S+ +L+I+D + FR D +L R + L + +L ++ +
Sbjct: 211 LAQVYLLPDFLSDHSKVQLVIIDGIAFPFRHDLD---DLFLRTRLLNGLAQQLISLANKH 267
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAP 323
+AV +TNQ+ D + PA G HA TIRL+F + +QR ++ +P
Sbjct: 268 RLAVILTNQMTTKIDKNQASLV-----PALGESWGHAATIRLIFH-WEQKQRFATLYKSP 321
Query: 324 NLPEAEAISFSYHIILIKITPGGIADA 350
+ E+ + F +ITP G DA
Sbjct: 322 SQKES-TVPF-------QITPQGFRDA 340
>ZFIN|ZDB-GENE-041010-204 [details] [associations]
symbol:rad51c "rad51 homolog C (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 ZFIN:ZDB-GENE-041010-204 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468 HOGENOM:HOG000227426
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 CTD:5889 HOVERGEN:HBG055764 KO:K10870
OrthoDB:EOG4CRM09 EMBL:BC083214 IPI:IPI00498753
RefSeq:NP_001006101.1 UniGene:Dr.83418 ProteinModelPortal:Q5XJT2
STRING:Q5XJT2 GeneID:450081 KEGG:dre:450081 InParanoid:Q5XJT2
NextBio:20833059 ArrayExpress:Q5XJT2 Uniprot:Q5XJT2
Length = 362
Score = 197 (74.4 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 73/253 (28%), Positives = 113/253 (44%)
Query: 93 ITGSDALLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQL 152
+T D L + + + I T LD+ +GGG+ G TE G GKTQL L V Q+
Sbjct: 71 VTALDLLHQEQTLGSIVTFCSGLDDAIGGGVPVGKTTEICGAPGVGKTQLCMQLAVDVQI 130
Query: 153 PTNMRGGNGKVAYIDTEGTFRPDRIVPIAER-------FGMDP---GAVLD-NI--IYAR 199
P G GK YIDTEG+F R+ +AE D GA+ + N+ I +
Sbjct: 131 PVFFGGLGGKALYIDTEGSFLVQRVADMAEAAVQHCTLLAEDTEQKGALEELNVEKILSN 190
Query: 200 AYTYE-HQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQK---LGQML 255
+ H Y LL + + V V+ + + F R + D Q+ L +
Sbjct: 191 LFLVRCHDYVKLLAEVYLLPDFLSEHPEVRLVV-IDSIAFPFRHDFEDLSQRTRLLNGLA 249
Query: 256 SRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQR 315
+L +++ + VAV +TNQ+ G PA G HA T RL+ +G++R
Sbjct: 250 QQLIQLATQHRVAVVLTNQMTTRVSNG---QSKLVPALGESWGHAATQRLILH-WEGQRR 305
Query: 316 VCKVFDAPNLPEA 328
+ ++ +P+ EA
Sbjct: 306 LASLYKSPSQMEA 318
>DICTYBASE|DDB_G0284507 [details] [associations]
symbol:DDB_G0284507 "putative Rad51C protein"
species:44689 "Dictyostelium discoideum" [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
dictyBase:DDB_G0284507 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000153_GR GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
EMBL:AAFI02000066 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
RefSeq:XP_638535.1 HSSP:Q55075 ProteinModelPortal:Q54PJ7
EnsemblProtists:DDB0232315 GeneID:8624628 KEGG:ddi:DDB_G0284507
InParanoid:Q54PJ7 KO:K10870 OMA:VREMATH Uniprot:Q54PJ7
Length = 381
Score = 129 (50.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 34/95 (35%), Positives = 49/95 (51%)
Query: 88 VNFGYITGSDALLR-RKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTL 146
+N I+ D L++ R I T +D++L GG ITE G GKT +A L
Sbjct: 43 LNNNGISALDLLIQGRDGNNNIITFCSEIDQMLNGGTPLKKITEICGVPGIGKTNMAFQL 102
Query: 147 CVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 181
V T +P ++ G GK YIDTEG++ R+ +A
Sbjct: 103 LVNTSIPFDLGGVQGKAIYIDTEGSYSCQRVREMA 137
Score = 115 (45.5 bits), Expect = 2.8e-13, Sum P(2) = 2.8e-13
Identities = 42/138 (30%), Positives = 65/138 (47%)
Query: 191 VLDNIIYARAYTYEHQYNLLLGLAAKMSE-EPFRLLIVDSVIALFRVDFTGRGELADRQQ 249
VL++I Y R Y Y +L+ L + + + +L++VDS+ FR DF G R +
Sbjct: 165 VLNSIYYYRVYHYIEIISLIHQLPLFLEKNKDVKLIVVDSITYPFRCDFKDMGL---RTR 221
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRL-M 306
L + L I+ +N+AV + NQV P I P G H T R+ +
Sbjct: 222 SLLSLAQNLMNIATRYNLAVVVMNQVTTKISPNQKESILVPYL---GESWTHICTYRMVL 278
Query: 307 FRKGKGEQRVCKVFDAPN 324
F K K QR C ++ +P+
Sbjct: 279 FWKQK--QRFCHLYKSPS 294
>UNIPROTKB|Q5ZM26 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162 KO:K10880
CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AADN02003784 EMBL:AJ719558 IPI:IPI00684938
RefSeq:NP_001006489.1 UniGene:Gga.3684 STRING:Q5ZM26
Ensembl:ENSGALT00000032496 GeneID:423485 KEGG:gga:423485
InParanoid:Q5ZM26 NextBio:20825955 Uniprot:Q5ZM26
Length = 347
Score = 191 (72.3 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 68/253 (26%), Positives = 114/253 (45%)
Query: 39 INAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDA 98
+N + L+ A I + ++ + L + LS A VE + + + + + +
Sbjct: 8 LNPKVIAALKKADIKSIKEVLNLSGADLQRLMKLSSADVECLLKTVSRALRKNCMLTALQ 67
Query: 99 LLRRKAVI-----KITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLP 153
L + K K++ G LD+LL GGI ITE GE +GKTQ+ LC+C Q P
Sbjct: 68 LYQDKDCFSSQCQKLSLGCSVLDDLLKGGIPLVGITELAGESSAGKTQIGLQLCLCVQYP 127
Query: 154 TNMRGGNGKVAYIDTEGTFRPDRIVP-IAERFGM--D-PGAVLDNIIYARAYTYEHQ--- 206
G YI TE F R+ IA++ + D P ++ I + + EH
Sbjct: 128 YRYGGLESGAVYICTEDAFPSKRLQQLIAQQHKLRADVPPEIIQKIRFGNSIFVEHAADL 187
Query: 207 ---YNLLLG-LAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKIS 262
+N + L+ ++ RL+++DS+ ALFR +F G + + + L ++L +S
Sbjct: 188 DTFHNCITKRLSLLLTRGMVRLVVIDSIAALFRCEF-GASDSVLKARYLQTFGAQLHGLS 246
Query: 263 EEFNVAVYMTNQV 275
F + NQV
Sbjct: 247 TRFRTPIMCINQV 259
>UNIPROTKB|E2RAE7 [details] [associations]
symbol:XRCC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
InterPro:IPR016467 Pfam:PF08423 PIRSF:PIRSF005856
GeneTree:ENSGT00550000074609 KO:K10880 CTD:7517 OMA:INQVTEA
EMBL:AAEX03006057 RefSeq:XP_003435154.1 Ensembl:ENSCAFT00000029054
GeneID:100687200 KEGG:cfa:100687200 Uniprot:E2RAE7
Length = 349
Score = 190 (71.9 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 69/253 (27%), Positives = 113/253 (44%)
Query: 39 INAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDA 98
+N + ++ A + + ++ + L + LS V+ + AA + G + +
Sbjct: 8 LNPRIIAAVKKAKLKSIKEVLHFSGPDLQRLTSLSSLDVQHLLRAASSRLRGGGVLTALQ 67
Query: 99 LLRRKAVI-----KITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLP 153
L R + +++ G LD LL GG+ +TE G +GKTQLA LC+ Q P
Sbjct: 68 LCERAGGLPARPQRLSLGCPVLDRLLRGGLPLDGVTELAGLSSAGKTQLALQLCLAVQFP 127
Query: 154 TNMRGGNGKVAYIDTEGTF---RPDRIVPIAERFGMD-PGAVLDNIIYARAYTYEHQYNL 209
G + YI TE F R +++ +R D PG V+ I ++ EH ++
Sbjct: 128 PRHGGLDAGAMYICTEDVFPNLRLQQLIAQQQRLRTDVPGEVVSRIKFSNQIFIEHVADV 187
Query: 210 --LLGLAAK-----MSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKIS 262
LL + +S RL+++DSV A FR +F G L R + L + + L ++S
Sbjct: 188 DSLLECVREKVPVLLSRGMARLVVIDSVAAPFRCEFDGPA-LVPRARHLQALGAALRRLS 246
Query: 263 EEFNVAVYMTNQV 275
F V NQV
Sbjct: 247 CAFQSPVLCINQV 259
>FB|FBgn0003480 [details] [associations]
symbol:spn-B "spindle B" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0009951 "polarity specification of
dorsal/ventral axis" evidence=IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IGI] [GO:0009949 "polarity
specification of anterior/posterior axis" evidence=IMP] [GO:0048477
"oogenesis" evidence=IGI;TAS] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0006417 "regulation of translation" evidence=TAS]
[GO:0000150 "recombinase activity" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0006281 "DNA
repair" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=TAS] [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0009994 "oocyte differentiation" evidence=NAS] [GO:0006302
"double-strand break repair" evidence=TAS] [GO:0007126 "meiosis"
evidence=TAS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
EMBL:AE014297 GO:GO:0005524 GO:GO:0009949 GO:GO:0007294
GO:GO:0006417 GO:GO:0003677 GO:GO:0006200 GO:GO:0006302
GO:GO:0030261 GO:GO:0008298 GO:GO:0030717 GO:GO:0007131
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HSSP:O74036
GO:GO:0009951 KO:K10880 OMA:YSPETPN EMBL:AF069531 EMBL:BT044133
EMBL:FJ219434 EMBL:FJ219442 EMBL:FJ219445 EMBL:FJ219448
RefSeq:NP_476740.1 UniGene:Dm.4725 SMR:O77135 IntAct:O77135
MINT:MINT-763026 STRING:O77135 EnsemblMetazoa:FBtr0082933
GeneID:41746 KEGG:dme:Dmel_CG3325 UCSC:CG3325-RA CTD:41746
FlyBase:FBgn0003480 HOGENOM:HOG000012350 InParanoid:O77135
OrthoDB:EOG49CNQT GenomeRNAi:41746 NextBio:825371 Uniprot:O77135
Length = 341
Score = 186 (70.5 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 57/180 (31%), Positives = 88/180 (48%)
Query: 107 KITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGK-VAY 165
+++ G ALD GGG+ T ITE G GKTQL L +C QLP + GG GK VAY
Sbjct: 87 RVSFGCSALDRCTGGGVVTRGITELCGAAGVGKTQLLLQLSLCVQLPREL-GGLGKGVAY 145
Query: 166 IDTEGTFRPDRIVPIAERFGM-DPGAVLD---NIIYARAYTYEHQYNLLLGLAAK-MSEE 220
I TE +F R++ +++ P L+ NI E ++ + M +
Sbjct: 146 ICTESSFPARRLLQMSKACEKRHPEMELNFLGNIFVENHIEAEPLLACVINRIPRLMQQH 205
Query: 221 PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPG 280
L+I+DSV A+FR+ + +R + + ++ L ++++N AV NQV G
Sbjct: 206 GIGLIIIDSVAAIFRL----YNDYLERARHMRRLADALLSYADKYNCAVVCVNQVATRDG 261
>UNIPROTKB|F1S262 [details] [associations]
symbol:RAD51C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IEA] [GO:0007066 "female meiosis
sister chromatid cohesion" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003684 "damaged DNA binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR004504 InterPro:IPR020588 PRINTS:PR01874
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
OMA:QRDLVSF EMBL:FP102481 Ensembl:ENSSSCT00000019210 Uniprot:F1S262
Length = 321
Score = 185 (70.2 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 73/224 (32%), Positives = 104/224 (46%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD +LGGG+ ITE G GKTQL L V Q+P G G+ +ID
Sbjct: 91 IITFCSALDNILGGGVPLTKITEICGAPGVGKTQLCMQLAVDVQIPECFGGVEGEAVFID 150
Query: 168 TEGTFRPDRIVPIAERF--------G--MD---PGAV----LDNIIYARAYTYEHQYNLL 210
TEG+F +R+V +A G M+ P A+ L+NI+ Y Y L
Sbjct: 151 TEGSFMVNRVVDLATACIQHLHLIAGTHMEEEQPKALQDFTLENILSHIYYFRCRDYTEL 210
Query: 211 LG----LAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEF 265
L L +SE RL+IVD + FR + +L+ R + L + ++ ++
Sbjct: 211 LAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHELD---DLSLRTRLLNGLAQQMISLANNH 267
Query: 266 NVAVYMTNQVIA--DPGGGVFISDPKKPAGGHVLAHAVTIRLMF 307
+AV +TNQ+ D + + PA G HA TIRL+F
Sbjct: 268 RLAVILTNQMTTKIDKNEALLV-----PALGESWGHAATIRLIF 306
>UNIPROTKB|O43542 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0010033 "response to organic substance" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005739
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 MIM:114480 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 HOGENOM:HOG000239162 KO:K10880 CTD:7517
HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS EMBL:AF035586
EMBL:AF037222 EMBL:AF508041 EMBL:BC001036 EMBL:BC002949
EMBL:BC011725 IPI:IPI00023073 RefSeq:NP_001093588.1
RefSeq:NP_001093589.1 RefSeq:NP_005423.1 UniGene:Hs.592325
UniGene:Hs.733412 ProteinModelPortal:O43542 SMR:O43542
IntAct:O43542 STRING:O43542 PhosphoSite:O43542 PaxDb:O43542
PRIDE:O43542 DNASU:7517 Ensembl:ENST00000352127
Ensembl:ENST00000445556 Ensembl:ENST00000553264
Ensembl:ENST00000554913 Ensembl:ENST00000555055 GeneID:7517
KEGG:hsa:7517 UCSC:uc001ynx.4 GeneCards:GC14M104163 HGNC:HGNC:12830
MIM:600675 MIM:613972 neXtProt:NX_O43542 PharmGKB:PA37422
InParanoid:O43542 PhylomeDB:O43542 GenomeRNAi:7517 NextBio:29415
ArrayExpress:O43542 Bgee:O43542 CleanEx:HS_XRCC3
Genevestigator:O43542 GermOnline:ENSG00000126215 Uniprot:O43542
Length = 346
Score = 183 (69.5 bits), Expect = 9.0e-12, P = 9.0e-12
Identities = 59/180 (32%), Positives = 83/180 (46%)
Query: 107 KITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYI 166
+++ G LD LL GG+ ITE G +GKTQLA LC+ Q P G YI
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAGAVYI 140
Query: 167 DTEGTFRPDRIVPI-AE--RFGMD-PGAVLDNIIYARAYTYEH--QYNLLLGLAAK---- 216
TE F R+ + A+ R D PG +L + + EH + LL K
Sbjct: 141 CTEDAFPHKRLQQLMAQQPRLRTDVPGELLQKLRFGSQIFIEHVADVDTLLECVNKKVPV 200
Query: 217 -MSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV 275
+S RL+++DSV A FR +F + A R + L + + L ++S F V NQV
Sbjct: 201 LLSRGMARLVVIDSVAAPFRCEFDSQAS-APRARHLQSLGATLRELSSAFQSPVLCINQV 259
>RGD|1306849 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0010033 "response to organic substance"
evidence=IEP] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306849
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0003677 GO:GO:0006281 GO:GO:0010033 GO:GO:0008094
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OrthoDB:EOG47D9GS
IPI:IPI00368372 Ensembl:ENSRNOT00000016208 UCSC:RGD:2325124
Uniprot:D4A5N4
Length = 349
Score = 179 (68.1 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 57/180 (31%), Positives = 83/180 (46%)
Query: 107 KITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYI 166
+++ G LD+ LGGG+ IT G +GKTQLA LC+ Q P G YI
Sbjct: 81 RLSLGCPVLDQFLGGGLPLEGITGLAGRSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYI 140
Query: 167 DTEGTFRPDRIVPIAERFG---MD-PGAVLDNIIYARAYTYEHQYNL--LLGLAAK---- 216
TE F R+ + E+ D PG V I + EH ++ L+ +K
Sbjct: 141 CTEDAFPSKRLWQLIEQLQELRTDVPGEVTQKIRFGNHIFIEHAADVDTLMECVSKRVPI 200
Query: 217 -MSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV 275
+S RL++VDS+ A FR +F + A R + L + + L ++S F V NQV
Sbjct: 201 LLSRGMARLVVVDSIAAPFRCEFHLQAS-AVRAKHLHSLGAALQRLSSTFRSPVLCINQV 259
>FB|FBgn0003482 [details] [associations]
symbol:spn-D "spindle D" species:7227 "Drosophila
melanogaster" [GO:0008298 "intracellular mRNA localization"
evidence=IMP;TAS] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0007294 "germarium-derived oocyte fate determination"
evidence=IGI] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0009951 "polarity
specification of dorsal/ventral axis" evidence=IMP] [GO:0030720
"oocyte localization involved in germarium-derived egg chamber
formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=TAS] [GO:0009994 "oocyte differentiation" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IMP] [GO:0046843 "dorsal appendage formation"
evidence=IMP] InterPro:IPR020588 PROSITE:PS50162 EMBL:AE014297
GO:GO:0005524 GO:GO:0009949 GO:GO:0007294 GO:GO:0003677
GO:GO:0006200 GO:GO:0008298 GO:GO:0046843 GO:GO:0031023
GO:GO:0030720 GO:GO:0030717 GO:GO:0007131 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 GeneTree:ENSGT00550000074609
KO:K10870 GO:GO:0009951 HSSP:Q06609 EMBL:AY071162 EMBL:AY257540
RefSeq:NP_733200.1 UniGene:Dm.6085 SMR:Q8SZ30 STRING:Q8SZ30
EnsemblMetazoa:FBtr0085116 GeneID:318579 KEGG:dme:Dmel_CG31069
UCSC:CG31069-RA CTD:318579 FlyBase:FBgn0003482 InParanoid:Q8SZ30
OMA:CLNVQIP OrthoDB:EOG4MKKZ1 GenomeRNAi:318579 NextBio:845512
Uniprot:Q8SZ30
Length = 270
Score = 173 (66.0 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 64/241 (26%), Positives = 105/241 (43%)
Query: 100 LRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGG 159
+ + A KI TG +ALD GGGI G + E G +GKTQ+ LC+ Q+P G
Sbjct: 38 ISQSASNKILTGKKALDTHFGGGISLGHLVELIGNSGTGKTQMCLQLCLNVQIPKAAGGL 97
Query: 160 NGKVAYIDTEGTFRPDRIVPIA---ER-FG-----MDPGAVLDNIIYARAYTYEHQYNLL 210
G +IDT F PDR++ +A ER + +L I Y R + +
Sbjct: 98 EGSALFIDTRQDFHPDRLMGLALKLERQYAHRVPEFKAHKMLQKIHYVRCPKLDQLMATV 157
Query: 211 LGLAAKMSEEP-FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAV 269
L + + P +L+++DS+ R+ G A R + L ++ + ++ + +
Sbjct: 158 LSCHRHLVDHPDIKLIVIDSLAFTLRMLEDG----AHRYEMLLELHESMRRLQRQHELTW 213
Query: 270 YMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNL-PEA 328
TN + F +PA G + +H + R+ F G E + K + L E+
Sbjct: 214 VFTNVLTHRYVKQKF---QVEPALGDLHSHLINERIWF-SGSSELHLGKSWRTSRLIKES 269
Query: 329 E 329
E
Sbjct: 270 E 270
>UNIPROTKB|Q2HJ51 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 GO:GO:0006310
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 EMBL:BC113309 IPI:IPI00716231 RefSeq:NP_001039769.1
UniGene:Bt.59591 ProteinModelPortal:Q2HJ51 STRING:Q2HJ51
Ensembl:ENSBTAT00000025404 GeneID:529507 KEGG:bta:529507 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 InParanoid:Q2HJ51
OMA:QARTQDE OrthoDB:EOG4K0QP3 NextBio:20875047 Uniprot:Q2HJ51
Length = 326
Score = 173 (66.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 83/305 (27%), Positives = 129/305 (42%)
Query: 38 GINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLS-EAKVEKICEAAEKIVNFGYITGS 96
G+ V+ LQ GI T L+ + + GLS +A V + F + G+
Sbjct: 11 GLTQDMVQLLQSRGIKTVVDLVCADLEEVAQKCGLSYKALVALRRVLLAQFSAFPF-NGA 69
Query: 97 DALLRRKAVIKI-TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTN 155
D K I +TG +LD+LL G+ TG +TE G SGKTQ+ LCV +
Sbjct: 70 DLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGAPGSGKTQVC--LCVAAHVA-- 125
Query: 156 MRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQYNLLLG 212
G V YID+ G RI+ + + D L I RA+ ++L
Sbjct: 126 -HGLQQNVLYIDSNGGLTASRILQLLQARTPDEEEQAGALQRIQVVRAFDIFQMLDVLQD 184
Query: 213 LAAKMSEE------PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFN 266
L +S++ ++++VDSV A+ G G+ + + Q+ L ++ + +
Sbjct: 185 LRGAVSQQVSSSSGTLKVVVVDSVAAVV-APLLG-GQQREGLALMMQLARELKTLARDLS 242
Query: 267 VAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMF----RKGK-GEQRVCKVFD 321
VAV +TN + D G KPA G + + RL+ G G RV +
Sbjct: 243 VAVLVTNHMTRDRDSGQL-----KPALGRSWSFVPSTRLLLDSTQSSGSLGSWRVVCLTK 297
Query: 322 APNLP 326
+P LP
Sbjct: 298 SPRLP 302
>UNIPROTKB|G4MNW7 [details] [associations]
symbol:MGG_06985 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
EMBL:CM001231 GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
KO:K10958 RefSeq:XP_003709736.1 ProteinModelPortal:G4MNW7
EnsemblFungi:MGG_06985T0 GeneID:2685158 KEGG:mgr:MGG_06985
Uniprot:G4MNW7
Length = 548
Score = 177 (67.4 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 59/181 (32%), Positives = 86/181 (47%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I+T LD LGGGI TG +TE GE +GKTQ +L + QLP G K YI
Sbjct: 137 ISTLDPELDAALGGGIPTGYVTEITGESGAGKTQFLLSLLLAVQLPPP-HGLGRKAMYIP 195
Query: 168 TEGTFRPDRIVPIAER----FGMDPGAVLDNIIYARAY-TYEHQYNLL-LGLAAKMSEEP 221
TE R+ + P LD+I+ + E Q ++L + + +
Sbjct: 196 TEAALSTRRVAQMLAANPLLLSASPRPSLDSILSLQPLGDIEAQDHILSFQVPLEAARRN 255
Query: 222 FRLLIVDSVIALFRVDFTGRGE----LADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIA 277
L+I+DSV A FR ++ G LA R +L ++ +L ++ N+AV + NQV A
Sbjct: 256 VGLIILDSVAANFRAEYDAAGSRSTGLAARSAELVRLGMQLRNLARSLNLAVVVANQV-A 314
Query: 278 D 278
D
Sbjct: 315 D 315
>ASPGD|ASPL0000051939 [details] [associations]
symbol:AN10145 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0033062 "Rhp55-Rhp57 complex" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0000722 "telomere maintenance via recombination" evidence=IEA]
[GO:0030491 "heteroduplex formation" evidence=IEA] [GO:0000707
"meiotic DNA recombinase assembly" evidence=IEA] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 GO:GO:0003677 GO:GO:0006259 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 ProteinModelPortal:C8VTV7
EnsemblFungi:CADANIAT00001591 OMA:ILSINAM Uniprot:C8VTV7
Length = 554
Score = 176 (67.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 60/180 (33%), Positives = 83/180 (46%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I+T ALD LL GGI TG +TE GE SGKTQ L + QLP G + YI
Sbjct: 105 ISTLDAALDTLLNGGIATGYVTEVTGESGSGKTQFLLGLLLAVQLPPPQGAGRSAI-YIS 163
Query: 168 TEGTFRPDRIVPIAE------RFGMDPGAVLDNIIYARAYTYEHQYNLL-LGLAAKMSEE 220
TE +R+ + E + L I+ A E Q ++L L +
Sbjct: 164 TEAPLATNRLSQLIECHPYLSTLSREQAPSLGRILSINAMDLESQDHILNYQLPVAIKRY 223
Query: 221 PFRLLIVDSVIALFRVDFTGR--GELADRQ---QKLGQMLSRLTKISEEFNVAVYMTNQV 275
L+++DS+ + +R + T L+ R KLGQML L SE+ VA+ + NQV
Sbjct: 224 NVGLVVIDSITSNYRAEHTSHDLSGLSTRSGELAKLGQMLRNLAA-SED--VAIVVANQV 280
>MGI|MGI:1921585 [details] [associations]
symbol:Xrcc3 "X-ray repair complementing defective repair in
Chinese hamster cells 3" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] InterPro:IPR020588 PROSITE:PS50162 MGI:MGI:1921585
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0005759
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOGENOM:HOG000239162
KO:K10880 CTD:7517 HOVERGEN:HBG054179 OMA:INQVTEA OrthoDB:EOG47D9GS
EMBL:AK014491 IPI:IPI00110210 RefSeq:NP_083151.1 UniGene:Mm.19082
ProteinModelPortal:Q9CXE6 SMR:Q9CXE6 STRING:Q9CXE6
PhosphoSite:Q9CXE6 PRIDE:Q9CXE6 DNASU:74335
Ensembl:ENSMUST00000021715 GeneID:74335 KEGG:mmu:74335
UCSC:uc007pdz.1 InParanoid:Q9CXE6 NextBio:340475 Bgee:Q9CXE6
Genevestigator:Q9CXE6 GermOnline:ENSMUSG00000021287 Uniprot:Q9CXE6
Length = 349
Score = 171 (65.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 66/234 (28%), Positives = 106/234 (45%)
Query: 58 LMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVI-----KITTGS 112
++ ++ L + GL V+ + AA + + + L ++K +++ G
Sbjct: 27 ILCYSGPDLQRLTGLPSHDVQCLLRAASLHLRGSRVLSALHLFQQKESFPEQHQRLSLGC 86
Query: 113 QALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTF 172
LD+ LGGG+ IT G +GKTQLA LC+ Q P G YI TE F
Sbjct: 87 PVLDQFLGGGLPLEGITGLAGCSSAGKTQLALQLCLAVQFPRQYGGLEAGAVYICTEDAF 146
Query: 173 RPDRIVP-IAE--RFGMD-PGAVLDNIIYARAYTYEHQYNL--LLGLAAK-----MSEEP 221
R+ IA+ R D P +++ I ++ EH ++ LL +K +S
Sbjct: 147 PSKRLWQLIAQQRRLRTDAPEELIEKIRFSNHIFIEHAADVDTLLECVSKKVPILLSRGM 206
Query: 222 FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV 275
RL++VDS+ A FR +F + A R + L + + L ++S F V NQV
Sbjct: 207 ARLVVVDSIAAPFRCEFHLQAS-AIRAKLLLSLGATLRRLSSTFRSPVLCINQV 259
>ZFIN|ZDB-GENE-050320-116 [details] [associations]
symbol:xrcc3 "X-ray repair complementing defective
repair in Chinese hamster cells 3" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 ZFIN:ZDB-GENE-050320-116
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:BX255905
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 HOVERGEN:HBG054179
OMA:INQVTEA IPI:IPI00494088 UniGene:Dr.75660
Ensembl:ENSDART00000010564 InParanoid:Q5TZD9 Uniprot:Q5TZD9
Length = 352
Score = 171 (65.3 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 66/221 (29%), Positives = 101/221 (45%)
Query: 72 LSEAKVEKICEA-AEKIVNFGYITGSDALLRRKAVI----KITTGSQALDELLGGGIETG 126
LS+A V+++ +A A + +T + V+ +++ LD L+ GG+
Sbjct: 41 LSKADVQRLHQAVAASVRKSKPVTALQLIQGECPVLEPGHRLSFACPVLDGLMRGGLPLR 100
Query: 127 AITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTF---RPDRIVPIAER 183
ITE GE +GKTQ LC+ Q P G N YI TE +F R +++ R
Sbjct: 101 GITELAGESAAGKTQFCLQLCLSVQYPQEHGGLNSGAVYICTEDSFPIKRLRQLITQQPR 160
Query: 184 FGMD-PGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEE-PF-------RLLIVDSVIALF 234
D P A++ ++ ++ EH +L L +S+ P RLL+VDSV ALF
Sbjct: 161 LRPDLPPALIHSLRFSDNIYIEHAADLE-ALQVCVSQRVPVLLKRGLVRLLVVDSVAALF 219
Query: 235 RVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV 275
R +F E R + L S L ++S + V NQV
Sbjct: 220 RSEFQA-DEAVQRSRHLLAFSSTLHRLSHTYAAPVLCVNQV 259
Score = 114 (45.2 bits), Expect = 0.00071, P = 0.00071
Identities = 43/125 (34%), Positives = 59/125 (47%)
Query: 223 RLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV--IAD-P 279
RLL+VDSV ALFR +F E R + L S L ++S + V NQV + D P
Sbjct: 208 RLLVVDSVAALFRSEFQA-DEAVQRSRHLLAFSSTLHRLSHTYAAPVLCVNQVTDVVDGP 266
Query: 280 GGGV----FISDPKKPAGGHVLAHAVTIRLMFRK--G--KGEQRVC-----KVFDAPNLP 326
G + PA G A+ V +RLM R+ G K + R C +V AP+LP
Sbjct: 267 NPGRCDYGLVGSKVLPALGIAWANQVMVRLMLRRLAGQVKSDSRSCAPRKLEVVFAPHLP 326
Query: 327 EAEAI 331
+ +
Sbjct: 327 RSSCL 331
>ZFIN|ZDB-GENE-040426-2490 [details] [associations]
symbol:rad51d "RAD51 homolog D (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162
ZFIN:ZDB-GENE-040426-2490 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OrthoDB:EOG4K0QP3
EMBL:BC066407 IPI:IPI00512042 RefSeq:NP_996959.1 UniGene:Dr.19061
ProteinModelPortal:Q6NYZ3 STRING:Q6NYZ3 PRIDE:Q6NYZ3 GeneID:404608
KEGG:dre:404608 InParanoid:Q6NYZ3 NextBio:20817676
ArrayExpress:Q6NYZ3 Bgee:Q6NYZ3 Uniprot:Q6NYZ3
Length = 327
Score = 170 (64.9 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 81/296 (27%), Positives = 133/296 (44%)
Query: 35 ISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGY-- 92
I GIN +K LQ I T + + L LS K A +++ Y
Sbjct: 8 ICPGINEDFIKALQTEDIRTVEDFVSWNPEELAQKCSLSY----KALVAVRRVLLAQYTA 63
Query: 93 --ITGSDA---LLRRKAVIKITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLC 147
I+G+D LL A++ +TGS +LD+LL G+ TG ITE G SGKTQ+ ++
Sbjct: 64 YPISGADLYEELLSSTAIL--STGSPSLDKLLDSGLYTGEITELTGSPGSGKTQVCFSVA 121
Query: 148 VCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQY 207
V + ++ V YIDT+G +R++ + + + ++ + + + +
Sbjct: 122 V--NISHQLKQ---TVVYIDTKGGMCANRLLQMLQTKTPNEQEQMEALQKIKVFRVFDVF 176
Query: 208 NLLLGLA-------AKMSEE--PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRL 258
+LL L KMS + L+VDSV A+ G G+ + L Q+ L
Sbjct: 177 SLLACLQNLRSTGLQKMSVGGGSVKALMVDSVSAVLS-PILG-GKQNEGMSLLMQVAGEL 234
Query: 259 TKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQ 314
I+++FN+AV +TN V D G V K G +H R++ ++ + E+
Sbjct: 235 KMIAKDFNIAVLVTNHVTKDGNGQV------KAGLGLSWSHVPRTRVLLQRVENEE 284
>UNIPROTKB|H7C1R0 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C1R0 Ensembl:ENST00000413590 Uniprot:H7C1R0
Length = 257
Score = 165 (63.1 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 70/236 (29%), Positives = 104/236 (44%)
Query: 138 GKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVP-----------IAERF-G 185
GKTQL L V Q+P G G+ +IDTEG+F DR+V IAE+ G
Sbjct: 10 GKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLATACIQHLQLIAEKHKG 69
Query: 186 MD-----PGAVLDNIIYARAYTYEHQYNLLLG----LAAKMSEEP-FRLLIVDSVIALFR 235
+ LDNI+ Y Y LL L +SE RL+IVD + FR
Sbjct: 70 EEHRKALEDFTLDNILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFR 129
Query: 236 VDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIA--DPGGGVFISDPKKPAG 293
D +L+ R + L + ++ ++ +AV +TNQ+ D + + PA
Sbjct: 130 HDLD---DLSLRTRLLNGLAQQMISLANNHRLAVILTNQMTTKIDRNQALLV-----PAL 181
Query: 294 GHVLAHAVTIRLMFRKGKGEQRVCKVFDAPNLPEAEAISFSYHIILIKITPGGIAD 349
G HA TIRL+F + + R+ ++ +P+ E +L +I P G D
Sbjct: 182 GESWGHAATIRLIFHWDRKQSRLATLYKSPSQKECT--------VLFQIKPQGFRD 229
>TAIR|locus:2825233 [details] [associations]
symbol:RAD51D "homolog of RAD51 D" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0006281 "DNA repair" evidence=ISS;RCA;IMP] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016444
"somatic cell DNA recombination" evidence=IMP] [GO:1900426
"positive regulation of defense response to bacterium"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=RCA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006281 EMBL:AC007583 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 EMBL:AJ549434
EMBL:AB194811 IPI:IPI00533353 PIR:H86212 RefSeq:NP_172254.2
UniGene:At.26372 ProteinModelPortal:Q9LQQ2 SMR:Q9LQQ2 STRING:Q9LQQ2
PRIDE:Q9LQQ2 EnsemblPlants:AT1G07745.1 GeneID:837289
KEGG:ath:AT1G07745 GeneFarm:4787 TAIR:At1g07745
HOGENOM:HOG000242993 InParanoid:Q9LQQ2 KO:K10871 OMA:RIKVERI
PhylomeDB:Q9LQQ2 ProtClustDB:CLSN2699036 Genevestigator:Q9LQQ2
GermOnline:AT1G07745 GO:GO:0002831 GO:GO:0016444 Uniprot:Q9LQQ2
Length = 322
Score = 165 (63.1 bits), Expect = 9.1e-10, P = 9.1e-10
Identities = 64/234 (27%), Positives = 97/234 (41%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGN-GKVAYI 166
++TG + D LL GG G +TE G SGKTQ C Q ++ + G+V Y+
Sbjct: 89 LSTGDKETDSLLQGGFREGQLTELVGPSSSGKTQF------CMQAAASVAENHLGRVLYL 142
Query: 167 DTEGTFRPDRIVP-IAERFGMDPGA-VLDNIIYARAYTYEHQYNLL------LGLAAKMS 218
DT +F RI I G V+ I+ Y ++ L L L ++
Sbjct: 143 DTGNSFSARRIAQFICSSSDATLGQKVMSRILCHTVYDIYTLFDTLQDLEITLRLQMNVN 202
Query: 219 EEPFRLLIVDSVIALFRVDFTGRGELADRQQ-KLGQMLSRLTKISEEFNVAVYMTNQVIA 277
E RLL+VDS+ +L G G +G +L K++ E ++A+ +TN +
Sbjct: 203 ESRLRLLVVDSISSLITPILGGSGSQGRALMVAIGYLLK---KLAHEHSIAILVTNHTVG 259
Query: 278 DPGGGVFISDPKKPAGGHVLAHAVTIRL-MFRKGKGEQRVCKVFDAPNLPEAEA 330
G G KPA G +RL + R K + +LP +A
Sbjct: 260 AGGEG----GKTKPALGETWKSIPHVRLSLSRDHKNSNCTISILKHTSLPSGQA 309
>UNIPROTKB|E9PI54 [details] [associations]
symbol:RAD51 "DNA repair protein RAD51 homolog 1"
species:9606 "Homo sapiens" [GO:0003684 "damaged DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] InterPro:IPR003583 InterPro:IPR010995
InterPro:IPR011941 SMART:SM00278 GO:GO:0005524 GO:GO:0003684
GO:GO:0006281 SUPFAM:SSF47794 EMBL:AC022405 GO:GO:0008094
EMBL:AC012476 PANTHER:PTHR22942:SF12 HGNC:HGNC:9817 ChiTaRS:RAD51
IPI:IPI00982914 ProteinModelPortal:E9PI54 SMR:E9PI54
Ensembl:ENST00000531277 ArrayExpress:E9PI54 Bgee:E9PI54
Uniprot:E9PI54
Length = 100
Score = 143 (55.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 33/71 (46%), Positives = 43/71 (60%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKI 80
KG+SEAK +KI
Sbjct: 64 KGISEAKADKI 74
>UNIPROTKB|Q9NZG9 [details] [associations]
symbol:RAD51 "RAD51" species:9606 "Homo sapiens"
[GO:0003684 "damaged DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0000800 "lateral
element" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
InterPro:IPR010995 InterPro:IPR011941 GO:GO:0005524 GO:GO:0007126
GO:GO:0003684 GO:GO:0000724 SUPFAM:SSF47794 GO:GO:0000800
EMBL:AC022405 GO:GO:0008094 EMBL:AC012476 HOGENOM:HOG000227426
PANTHER:PTHR22942:SF12 UniGene:Hs.631709 HGNC:HGNC:9817
ChiTaRS:RAD51 HSSP:Q06609 EMBL:AF203691 IPI:IPI01018851 SMR:Q9NZG9
STRING:Q9NZG9 Ensembl:ENST00000526763 Uniprot:Q9NZG9
Length = 75
Score = 143 (55.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 33/71 (46%), Positives = 43/71 (60%)
Query: 12 QLQLVEREDIDDEEDLF--EAIDKLISQGINAGDVKKLQDAGIYTCNGLMMHTKKHLTGI 69
Q+QL D EE+ F + I +L GINA DVKKL++AG +T + KK L I
Sbjct: 4 QMQLEANADTSVEEESFGPQPISRLEQCGINANDVKKLEEAGFHTVEAVAYAPKKELINI 63
Query: 70 KGLSEAKVEKI 80
KG+SEAK +KI
Sbjct: 64 KGISEAKADKI 74
>UNIPROTKB|I3LTG9 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0006259 "DNA
metabolic process" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609 OMA:QARTQDE
EMBL:FP565655 Ensembl:ENSSSCT00000023297 Uniprot:I3LTG9
Length = 322
Score = 159 (61.0 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 80/303 (26%), Positives = 127/303 (41%)
Query: 38 GINAGDVKKLQDAGIYTCNGLMMHTKKHLTGIKGLSEAKVEKICEAAEKIVNFGYITGSD 97
G+ V+ LQ GI T L+ + + GLS + + + G+D
Sbjct: 11 GLTQDMVQLLQSRGIKTVVDLVSADLEEVAQKCGLSYKALVALRRVLLAQFSAFPCNGAD 70
Query: 98 ALLRRKAVIKI-TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNM 156
K I +TG ++LD+LL G+ TG +TE G SGKTQ+ LCV + ++
Sbjct: 71 LYEELKTSTAILSTGIRSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCVAANVAHSL 128
Query: 157 RGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQYNLLLGL 213
+ KV YID+ G RI+ + + D L I R + ++L L
Sbjct: 129 QQ---KVLYIDSNGGLTASRILQLLQARTSDEEEQAGALQRIQVVRVFDIFQMLDVLQDL 185
Query: 214 AAKMSEE------PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNV 267
++++ ++++VDSV A F+G E A L + R T + F +
Sbjct: 186 RGAVAQQVSSSAGTVKVVVVDSVTA--GSPFSGGNEAAGAAV-LCPSIPRSTSLC--FFL 240
Query: 268 AVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFR----KGKGEQRVCKVFDAP 323
+TN V D G KPA G + + RL+ G G +RV ++ +P
Sbjct: 241 P-QVTNHVTRDRDSG-----KHKPALGRSWSFVPSTRLLLDISQDAGAGSRRVARLTKSP 294
Query: 324 NLP 326
LP
Sbjct: 295 RLP 297
>UNIPROTKB|E1BVK2 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006259
"DNA metabolic process" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162
SMART:SM00382 GO:GO:0005524 GO:GO:0003677 GO:GO:0006259
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423
GeneTree:ENSGT00550000074609 KO:K10871 CTD:5892 OMA:QARTQDE
EMBL:AADN02025945 IPI:IPI00597433 RefSeq:NP_001185575.1
UniGene:Gga.9680 ProteinModelPortal:E1BVK2
Ensembl:ENSGALT00000003463 GeneID:417528 KEGG:gga:417528
NextBio:20820813 Uniprot:E1BVK2
Length = 327
Score = 155 (59.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 57/202 (28%), Positives = 92/202 (45%)
Query: 95 GSDALLRRKAVIKIT-TGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLP 153
G+D K+ I TG+ +LD+LL G+ TG +TE G SGKTQ+ ++ L
Sbjct: 68 GADLYEELKSSTAILPTGNPSLDQLLDAGLYTGEVTELAGAPGSGKTQVCLSIAASVSL- 126
Query: 154 TNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLD---NIIYARAYT-YE----- 204
G V ++D+ G F R+ + + D L+ + R + YE
Sbjct: 127 ----GLRQHVFFLDSTGGFTASRLYQMLQARVEDKEEQLEALQRVQVVRMFDIYEMLRAL 182
Query: 205 HQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEE 264
H+ L + S P + +++DSV A+ GR ++ + Q+ L +++E
Sbjct: 183 HEVRDCLSQQVESSAGPLKAVLIDSVSAVLSPLLGGRQ--SEGLAIMMQLARELKTLAKE 240
Query: 265 FNVAVYMTNQVIADPGGGVFIS 286
F+VAV +TNQV D G S
Sbjct: 241 FSVAVVVTNQVTRDSSTGALKS 262
>POMBASE|SPAC20H4.07 [details] [associations]
symbol:rad57 "RecA family ATPase Rad57/Rhp57"
species:4896 "Schizosaccharomyces pombe" [GO:0000724 "double-strand
break repair via homologous recombination" evidence=IGI]
[GO:0000730 "DNA recombinase assembly" evidence=IMP] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0033062 "Rhp55-Rhp57 complex" evidence=NAS]
[GO:0033170 "protein-DNA loading ATPase activity" evidence=TAS]
[GO:0042148 "strand invasion" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] InterPro:IPR020588
PROSITE:PS50162 PomBase:SPAC20H4.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0007131
eggNOG:COG0468 InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 GO:GO:0000730 GO:GO:0033170 GO:GO:0042148
GO:GO:0033062 EMBL:AB024744 PIR:T43507 RefSeq:NP_593627.1
ProteinModelPortal:Q9UUL2 IntAct:Q9UUL2 STRING:Q9UUL2
EnsemblFungi:SPAC20H4.07.1 GeneID:2542007 KEGG:spo:SPAC20H4.07
KO:K10958 OMA:LERRTHC OrthoDB:EOG4HTD1G NextBio:20803087
Uniprot:Q9UUL2
Length = 354
Score = 154 (59.3 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 49/144 (34%), Positives = 70/144 (48%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
+TTG LDE L GGI G +TE GE SGK+Q LC+ QLP ++ G N +I
Sbjct: 75 LTTGDVKLDETLHGGIPVGQLTEICGESGSGKSQFCMQLCLMVQLPLSLGGMNKAAVFIS 134
Query: 168 TEGTFRPDRIVPIA----ERFGMDPGAVLDNIIYA----RAYTY-----EHQYNLL-LGL 213
TE R+ +A ER+ P A +II R YT E Q +++ L
Sbjct: 135 TESGLETKRLFELARYLPERY---PKADKKDIIIKNPGDRVYTILCPDLESQEHIIQYQL 191
Query: 214 AAKMSEEPFRLLIVDSVIALFRVD 237
+ + L+I+DSV + +R +
Sbjct: 192 PILFNRDKIGLVILDSVASNYRAE 215
>DICTYBASE|DDB_G0276073 [details] [associations]
symbol:recA "recombinase A" species:44689
"Dictyostelium discoideum" [GO:0006281 "DNA repair"
evidence=IEA;IGI] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009432 "SOS response" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
dictyBase:DDB_G0276073 GO:GO:0005739 GO:GO:0005524 GO:GO:0006281
EMBL:AAFI02000014 GenomeReviews:CM000151_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 EMBL:BR000215 RefSeq:XP_643316.1
HSSP:P0A7G6 ProteinModelPortal:Q75JL2 SMR:Q75JL2 STRING:Q75JL2
EnsemblProtists:DDB0231571 GeneID:8620362 KEGG:ddi:DDB_G0276073
OMA:IRRTEWI Uniprot:Q75JL2
Length = 452
Score = 155 (59.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 64/245 (26%), Positives = 104/245 (42%)
Query: 67 TGIKGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLG-GGIET 125
T K S + +E + + EK G + + + V I +GS LD LG GG+
Sbjct: 80 TSKKSASSSSMENVLKELEKSFGKGTLMKLGSQFSTQKVEVIPSGSMGLDIALGVGGLPK 139
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 185
G +TE FG SGKT LA L V Q GGN +ID E P A R G
Sbjct: 140 GRVTEIFGPESSGKTTLA--LHVIAQ--AQKAGGN--CTFIDAEHALNPQW----AARLG 189
Query: 186 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFT-GRGEL 244
++ LD + ++ E ++ L + + V +++ ++ G L
Sbjct: 190 VN----LDELFVSQPDNGEQALEIVDSLLRSKTMSVIVVDSVAALVPRVEIEGEMGDSHL 245
Query: 245 ADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIR 304
+ + + Q L +L+ ++ N + NQ+ G V +P+ +GG+ L +IR
Sbjct: 246 GVQARLMSQALRKLSPTLKDSNCVLIFINQIRMKIG--VMFGNPEVTSGGNALKFFSSIR 303
Query: 305 LMFRK 309
+ RK
Sbjct: 304 IDIRK 308
>MGI|MGI:1261809 [details] [associations]
symbol:Rad51d "RAD51 homolog D" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382
MGI:MGI:1261809 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 KO:K10871 CTD:5892 HOGENOM:HOG000049134
HOVERGEN:HBG057455 OMA:QARTQDE OrthoDB:EOG4K0QP3 EMBL:AB007040
EMBL:AF034955 EMBL:Y15570 EMBL:AK017835 EMBL:BC049136
IPI:IPI00116701 RefSeq:NP_035365.1 UniGene:Mm.9286
ProteinModelPortal:O55230 SMR:O55230 MINT:MINT-415416 STRING:O55230
PhosphoSite:O55230 PRIDE:O55230 Ensembl:ENSMUST00000018985
GeneID:19364 KEGG:mmu:19364 InParanoid:O55230 NextBio:296433
Bgee:O55230 CleanEx:MM_RAD51L3 Genevestigator:O55230
GermOnline:ENSMUSG00000018841 Uniprot:O55230
Length = 329
Score = 152 (58.6 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 64/250 (25%), Positives = 111/250 (44%)
Query: 93 ITGSDALLRRKAVIKI-TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQ 151
+ G+D K I +TG +LD+LL G+ TG +TE G SGKTQ+ LCV
Sbjct: 66 LNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCVAAN 123
Query: 152 LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQYN 208
+ +++ V Y+D+ G R++ + + D + L I R++ +
Sbjct: 124 VAHSLQQN---VLYVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVRSFDIFRMLD 180
Query: 209 LLLGLAAKMSEEP------FRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKIS 262
+L L ++++ +++IVDSV A+ G G+ + + Q+ L ++
Sbjct: 181 MLQDLRGTIAQQEATSSGAVKVVIVDSVTAVV-APLLG-GQQREGLALMMQLARELKILA 238
Query: 263 EEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMF--RKGKG----EQRV 316
+ VAV +TN + D G F KPA G + + R++ +G G QR
Sbjct: 239 RDLGVAVVVTNHLTRDWDGRRF-----KPALGRSWSFVPSTRILLDVTEGAGTLGSSQRT 293
Query: 317 CKVFDAPNLP 326
+ +P P
Sbjct: 294 VCLTKSPRQP 303
>UNIPROTKB|H7C2Q5 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
ProteinModelPortal:H7C2Q5 Ensembl:ENST00000425173 Bgee:H7C2Q5
Uniprot:H7C2Q5
Length = 213
Score = 143 (55.4 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 33/74 (44%), Positives = 42/74 (56%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I T ALD++LGGG+ TE G GKTQL L V Q+P G G+ +ID
Sbjct: 32 IITFCSALDDILGGGVPLMKTTEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFID 91
Query: 168 TEGTFRPDRIVPIA 181
TEG+F DR+V +A
Sbjct: 92 TEGSFMVDRVVDLA 105
>UNIPROTKB|J3QR58 [details] [associations]
symbol:RAD51C "DNA repair protein RAD51 homolog 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0007066 "female meiosis sister
chromatid cohesion" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008821 "crossover junction endodeoxyribonuclease activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632
Pfam:PF08423 EMBL:AC025521 EMBL:AC011195 HGNC:HGNC:9820
Ensembl:ENST00000461271 Uniprot:J3QR58
Length = 135
Score = 103 (41.3 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 129 TEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIA 181
TE G GKTQL L V Q+P G G+ +IDTEG+F DR+V +A
Sbjct: 4 TEICGAPGVGKTQLCMQLAVDVQIPECFGGVAGEAVFIDTEGSFMVDRVVDLA 56
Score = 48 (22.0 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 19/57 (33%), Positives = 26/57 (45%)
Query: 182 ERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP-FRLLIVDSVIALFRVD 237
E F +D +L +I Y R Y + L +SE RL+IVD + FR D
Sbjct: 80 EDFTLDN--ILSHIYYFRCRDYTELLAQVYLLPDFLSEHSKVRLVIVDGIAFPFRHD 134
>UNIPROTKB|E2RP02 [details] [associations]
symbol:RAD51D "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR020588
PROSITE:PS50162 SMART:SM00382 GO:GO:0005524 GO:GO:0003677
GO:GO:0006259 GO:GO:0008094 InterPro:IPR013632 InterPro:IPR016467
Pfam:PF08423 PIRSF:PIRSF005856 GeneTree:ENSGT00550000074609
KO:K10871 CTD:5892 OMA:QARTQDE EMBL:AAEX03006625 RefSeq:XP_548263.2
Ensembl:ENSCAFT00000029092 GeneID:491143 KEGG:cfa:491143
NextBio:20864025 Uniprot:E2RP02
Length = 328
Score = 150 (57.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 61/234 (26%), Positives = 103/234 (44%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
++TG +LD+LL G+ TG +TE G SGKTQ+ LCV + ++ V YID
Sbjct: 82 LSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQVC--LCVAANVAYGLQQN---VVYID 136
Query: 168 TEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEE---- 220
+ G RI+ + + D L I RA+ ++L +S++
Sbjct: 137 SNGGLTASRILQLLQARTPDEEVQAGALQRIQVVRAFDIFQMLDVLQDCRGTLSQQVSSA 196
Query: 221 --PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIAD 278
+++IVDSV A+ G G+ + + Q+ L ++ + +AV +TN + D
Sbjct: 197 SGTVKVVIVDSVTAVVS-PLLG-GQQREGLALMMQLARELKTLARDLGMAVVVTNHMTRD 254
Query: 279 PGGGVFISDPKKPAGGHVLAHAVTIRLMFRKGKGEQ------RVCKVFDAPNLP 326
G KPA G + + R++ +G + R C + +P LP
Sbjct: 255 RDSGEL-----KPALGRSWSFVPSTRILLDIDEGARASGSWRRAC-LTKSPRLP 302
>TIGR_CMR|ECH_1109 [details] [associations]
symbol:ECH_1109 "recA protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_507893.1 ProteinModelPortal:Q2GF90 SMR:Q2GF90
STRING:Q2GF90 GeneID:3927794 KEGG:ech:ECH_1109 PATRIC:20577554
BioCyc:ECHA205920:GJNR-1112-MONOMER Uniprot:Q2GF90
Length = 357
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 67/245 (27%), Positives = 114/245 (46%)
Query: 70 KGLSEAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKI---TTGSQALDELLG-GGIET 125
K L++ + +K ++A + + G+ L++ A+ KI +TGS ALD LG GG
Sbjct: 5 KNLNQER-QKALDSAISQIEKAFGRGAIMKLKQGAIEKIDSISTGSIALDTALGIGGFPK 63
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFG 185
G I E FG SGKT LA L V + + +GGN A+ID E D + A + G
Sbjct: 64 GRIVEIFGPESSGKTTLA--LHVIAE--SQKKGGN--CAFIDAEHAL--D--IMYARKLG 113
Query: 186 MDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFT-GRGEL 244
++ G ++I ++ T E +++ L + + + V ++ ++ G +
Sbjct: 114 VNTG----DLIVSQPDTGEQALHIVEYLVCSGAIDVIVVDSVAALTPRAEIEGDMGDQHM 169
Query: 245 ADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIR 304
+ + L L +LT I + N + NQ+ G V +P+ GG+ L ++R
Sbjct: 170 GLQARLLSHALRKLTSIVSKANCVLIFINQIRMKIG--VVYGNPETTTGGNALKFYSSVR 227
Query: 305 LMFRK 309
L RK
Sbjct: 228 LDIRK 232
>TIGR_CMR|BA_3915 [details] [associations]
symbol:BA_3915 "recA protein, group I intron-containing"
species:198094 "Bacillus anthracis str. Ames" [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AF229167 RefSeq:NP_846162.1
RefSeq:YP_029881.1 ProteinModelPortal:Q9APZ2 SMR:Q9APZ2
IntAct:Q9APZ2 EnsemblBacteria:EBBACT00000011833
EnsemblBacteria:EBBACT00000023909 EnsemblBacteria:EBBACT00000082851
GeneID:1087627 GeneID:2850041 KEGG:ban:BA_3915 KEGG:bat:BAS3629
PATRIC:18785420 ProtClustDB:PRK09354 Uniprot:Q9APZ2
Length = 343
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 66/246 (26%), Positives = 115/246 (46%)
Query: 74 EAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITTGSQALDELLG-GGIETGAITEAF 132
+A ++ + EK G I RK V +++GS ALD LG GG G I E +
Sbjct: 5 QAALDMALKQIEKQFGKGSIMKLGEQAERK-VSTVSSGSLALDVALGVGGYPRGRIIEIY 63
Query: 133 GEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVL 192
G SGKT ++ L ++ R G G+ A+ID E P A++ G++ +
Sbjct: 64 GPESSGKTTVS--LHAIAEV---QRQG-GQAAFIDAEHAMDP----VYAQKLGVN----I 109
Query: 193 DNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALF-RVDFTGRGELADRQQKL 251
D ++ ++ T E + L + + ++++DSV AL + + G++ D L
Sbjct: 110 DELLLSQPDTGEQGLEIAEALVRSGAVD---IIVIDSVAALVPKAEI--EGDMGDSHVGL 164
Query: 252 -GQMLSR-LTKISEEFN----VAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRL 305
+++S+ L K+S N +A+++ NQ+ G V +P+ GG L T+RL
Sbjct: 165 QARLMSQALRKLSGAINKSKTIAIFI-NQIREKVG--VMFGNPETTPGGRALKFYSTVRL 221
Query: 306 MFRKGK 311
R+ +
Sbjct: 222 EVRRAE 227
>TIGR_CMR|CJE_1845 [details] [associations]
symbol:CJE_1845 "recA protein" species:195099
"Campylobacter jejuni RM1221" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_179815.1
ProteinModelPortal:Q5HSC0 SMR:Q5HSC0 STRING:Q5HSC0 GeneID:3232472
KEGG:cjr:CJE1845 PATRIC:20045522 OMA:TRKGAWY
BioCyc:CJEJ195099:GJC0-1884-MONOMER Uniprot:Q5HSC0
Length = 343
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 71/242 (29%), Positives = 110/242 (45%)
Query: 79 KICEAAEKIVNFGYITGSDALLRRKAVIKIT---TGSQALDELLG-GGIETGAITEAFGE 134
K +AA K ++ + G+ L K V +I TGS LD LG GG+ G I E +G
Sbjct: 7 KSLDAALKSLDKTFGKGTILRLGDKEVEQIDSIGTGSVGLDLALGIGGVPKGRIIEIYGP 66
Query: 135 FRSGKTQLA-HTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLD 193
SGKT L H + C + G G A+ID E D V A+ G++ D
Sbjct: 67 ESSGKTTLTLHIIAEC------QKAG-GVCAFIDAEHAL--D--VKYAKNLGVNT----D 111
Query: 194 NIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALF-RVDFTGRGELADR----Q 248
++ ++ E ++ +A + + L++VDSV AL + + G++ D+ Q
Sbjct: 112 DLYVSQPDFGEQALEIVETIARSGAVD---LIVVDSVAALTPKAEI--EGDMGDQHVGLQ 166
Query: 249 QKL-GQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMF 307
+L Q L +LT I + N V NQ+ G + P+ GG+ L ++RL
Sbjct: 167 ARLMSQALRKLTGIVHKMNTTVIFINQIRMKIGAMGY-GTPETTTGGNALKFYASVRLDV 225
Query: 308 RK 309
RK
Sbjct: 226 RK 227
>TIGR_CMR|CBU_1054 [details] [associations]
symbol:CBU_1054 "recA protein" species:227377 "Coxiella
burnetii RSA 493" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE016828
GenomeReviews:AE016828_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354
RefSeq:NP_820055.1 ProteinModelPortal:Q83CQ4 SMR:Q83CQ4
PRIDE:Q83CQ4 GeneID:1208955 KEGG:cbu:CBU_1054 PATRIC:17930833
OMA:MLIFINQ BioCyc:CBUR227377:GJ7S-1046-MONOMER Uniprot:Q83CQ4
Length = 343
Score = 141 (54.7 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 63/217 (29%), Positives = 104/217 (47%)
Query: 108 ITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLA-HTLCVCTQLPTNMRGGNGKVAY 165
I+TGS LD LG GG+ G I E +G SGKT LA T+ C ++ GG A+
Sbjct: 39 ISTGSLGLDIALGVGGLPRGRIIEIYGPEASGKTTLALQTIASCQRM-----GGTA--AF 91
Query: 166 IDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLL 225
+D E D I A + G+ +++++ ++ T E + L + + L+
Sbjct: 92 VDAEHAL--DAIY--AGKLGVK----VEDLLVSQPDTGEQALEITDMLVRSGAVD---LI 140
Query: 226 IVDSVIALF-RVDFTG-RGE--LADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGG 281
++DSV AL + + G G+ + + + + Q L +LT ++ N V NQ+ G
Sbjct: 141 VIDSVAALTPKAEIEGDMGDSHMGLQARLMSQALRKLTANIKKSNTLVIFINQIRMKIG- 199
Query: 282 GVFISDPKKPAGGHVLAHAVTIRLMFRK-G---KGEQ 314
V +P+ GG+ L ++RL R+ G KGE+
Sbjct: 200 -VMFGNPETTTGGNALKFYSSVRLDIRRIGAIKKGEE 235
>UNIPROTKB|O75771 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR020588 PROSITE:PS50162 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006281 EMBL:CH471147
GO:GO:0007131 Orphanet:145 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 InterPro:IPR016467 Pfam:PF08423
PIRSF:PIRSF005856 EMBL:AC022916 KO:K10871 CTD:5892
HOGENOM:HOG000049134 HOVERGEN:HBG057455 OMA:QARTQDE
OrthoDB:EOG4K0QP3 EMBL:Y15572 EMBL:AF034956 EMBL:AB013341
EMBL:AB016223 EMBL:AB016224 EMBL:AB016225 EMBL:AB018360
EMBL:AB018361 EMBL:AB018362 EMBL:AB018363 EMBL:AB020412
EMBL:AY623116 EMBL:AK296241 EMBL:BC014422 EMBL:AL117459
IPI:IPI00216381 IPI:IPI00216382 IPI:IPI00216383 IPI:IPI00216384
IPI:IPI00216386 IPI:IPI00291454 IPI:IPI00411326 IPI:IPI00791891
PIR:T17247 RefSeq:NP_001136043.1 RefSeq:NP_002869.3
RefSeq:NP_598332.1 UniGene:Hs.631757 PDB:2KZ3 PDBsum:2KZ3
ProteinModelPortal:O75771 SMR:O75771 DIP:DIP-24265N IntAct:O75771
MINT:MINT-127795 STRING:O75771 PhosphoSite:O75771 PRIDE:O75771
DNASU:5892 Ensembl:ENST00000335858 Ensembl:ENST00000345365
Ensembl:ENST00000357906 Ensembl:ENST00000360276
Ensembl:ENST00000394589 GeneID:5892 KEGG:hsa:5892 UCSC:uc002hir.2
UCSC:uc002his.2 GeneCards:GC17M033427 HGNC:HGNC:9823 MIM:602954
MIM:614291 neXtProt:NX_O75771 PharmGKB:PA34179 PhylomeDB:O75771
GenomeRNAi:5892 NextBio:22920 ArrayExpress:O75771 Bgee:O75771
Genevestigator:O75771 GermOnline:ENSG00000185379 Uniprot:O75771
Length = 328
Score = 140 (54.3 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 56/225 (24%), Positives = 99/225 (44%)
Query: 93 ITGSDALLRRKAVIKI-TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQ 151
+ G+D K I +TG +LD+LL G+ TG +TE G SGKTQ+ C+C
Sbjct: 66 VNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQV----CLC-- 119
Query: 152 LPTNMRGG-NGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQY 207
+ N+ G V Y+D+ G R++ + + D L I A+
Sbjct: 120 MAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQML 179
Query: 208 NLLLGLAAKMSEE------PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKI 261
++L L ++++ ++++VDSV A+ G G+ + + Q+ L +
Sbjct: 180 DVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVS-PLLG-GQQREGLALMMQLARELKTL 237
Query: 262 SEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLM 306
+ + +AV +TN + D G KPA G + + R++
Sbjct: 238 ARDLGMAVVVTNHITRDRDSGRL-----KPALGRSWSFVPSTRIL 277
>TIGR_CMR|CHY_1166 [details] [associations]
symbol:CHY_1166 "recA protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003684 GO:GO:0006281
GO:GO:0006310 GO:GO:0003697 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:TRKGAWY RefSeq:YP_360011.1
ProteinModelPortal:Q3ACX3 SMR:Q3ACX3 STRING:Q3ACX3 GeneID:3727219
KEGG:chy:CHY_1166 PATRIC:21275472
BioCyc:CHYD246194:GJCN-1165-MONOMER Uniprot:Q3ACX3
Length = 343
Score = 139 (54.0 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 56/206 (27%), Positives = 95/206 (46%)
Query: 108 ITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLA-HTLCVCTQLPTNMRGGNGKVAY 165
I TGS ALD LG GG+ G + E FG SGKT +A H + ++ G A+
Sbjct: 39 IPTGSLALDLALGVGGVPRGRVVEIFGPESSGKTTVALHIIAEAQKM-------GGIAAF 91
Query: 166 IDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLL 225
ID E P A++ G+D ++N++ ++ T E + L + + +
Sbjct: 92 IDAEHALDP----VYAQKLGVD----IENLLVSQPDTGEQALEIAESLVRSGAIDVIVID 143
Query: 226 IVDSVIALFRVDFT-GRGELADRQQKLGQMLSRLT-KISEEFNVAVYMTNQVIADPGGGV 283
V +++ ++ G + + + + Q L +LT IS+ VA+++ NQ+ G V
Sbjct: 144 SVAALVPRAEIEGEMGDAHVGLQARLMSQALRKLTGAISKSKTVAIFI-NQMREKVG--V 200
Query: 284 FISDPKKPAGGHVLAHAVTIRLMFRK 309
+P+ GG L +IR+ RK
Sbjct: 201 MFGNPETTPGGRALKFYASIRMDVRK 226
>TIGR_CMR|NSE_0530 [details] [associations]
symbol:NSE_0530 "recA protein" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000237 GenomeReviews:CP000237_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_506414.1 ProteinModelPortal:Q2GDN2 SMR:Q2GDN2
STRING:Q2GDN2 GeneID:3931948 KEGG:nse:NSE_0530 PATRIC:22681109
BioCyc:NSEN222891:GHFU-550-MONOMER Uniprot:Q2GDN2
Length = 327
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 58/205 (28%), Positives = 88/205 (42%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYID 167
I+TGS LD LGGGI G I E FG SGKT L TL + + N G A+ID
Sbjct: 36 ISTGSIGLDSALGGGIPKGRIIEIFGPESSGKTTL--TLHIIAEAQKN----GGTCAFID 89
Query: 168 TEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIV 227
E P A R G+ ++ ++ ++ T E ++ L + + + V
Sbjct: 90 AEHALDP----VYARRLGVK----IEELLISQPDTGEQALEIVDSLIKSGAVDVIVVDSV 141
Query: 228 DSVIALFRVDFTGR-GEL-ADRQQKL-GQMLSRLTKISEEFNVAVYMTNQVIADPGGGVF 284
++ + + G G+L Q +L Q L ++T N V NQ+ G V
Sbjct: 142 AALTP--KAEIEGEMGDLHVGLQARLLSQALRKITASVSRSNCVVVFINQIRMKIG--VM 197
Query: 285 ISDPKKPAGGHVLAHAVTIRLMFRK 309
P+ GG+ L ++R+ RK
Sbjct: 198 FGSPETTTGGNALKFYSSVRIDIRK 222
>TIGR_CMR|GSU_0145 [details] [associations]
symbol:GSU_0145 "recA protein" species:243231 "Geobacter
sulfurreducens PCA" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE017180
GenomeReviews:AE017180_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:NP_951207.1 ProteinModelPortal:P62215 SMR:P62215
GeneID:2688015 KEGG:gsu:GSU0145 PATRIC:22023038
BioCyc:GSUL243231:GH27-171-MONOMER Uniprot:P62215
Length = 338
Score = 132 (51.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 64/240 (26%), Positives = 102/240 (42%)
Query: 74 EAKVEKICEAAEKIVNFGYIT--GSDALLRRKAVIKITTGSQALDELLG-GGIETGAITE 130
E +E EK G I G+D L V I TGS +LD LG GG+ G I E
Sbjct: 6 EKAIELALSQIEKQFGKGAIMRLGADEAL--PDVAAIPTGSLSLDLALGVGGVPRGRIIE 63
Query: 131 AFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGA 190
+G SGKT LA + Q + G G A++D E D + A + G+
Sbjct: 64 IYGPESSGKTTLALHIAAEAQ-----KMG-GIAAFVDAEHAL--D--IGYARKLGVKT-- 111
Query: 191 VLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFT-GRGELADRQQ 249
D+++ ++ T E + L + + + V +++ ++ G + + +
Sbjct: 112 --DDLLVSQPDTGEQALEIAEMLVRSGAVDVLVIDSVAALVPKAEIEGEMGDSHMGLQAR 169
Query: 250 KLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
+ Q L +LT I + N V NQ+ G V +P+ GG+ L ++RL RK
Sbjct: 170 LMSQALRKLTGIISKSNCCVIFINQIRMKIG--VMFGNPETTTGGNALKFYASVRLDIRK 227
>TIGR_CMR|APH_1354 [details] [associations]
symbol:APH_1354 "recA protein" species:212042 "Anaplasma
phagocytophilum HZ" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0003684 GO:GO:0006281 GO:GO:0006310 GO:GO:0003697
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 OMA:IRRTEWI ProtClustDB:PRK09354
RefSeq:YP_505854.1 ProteinModelPortal:Q2GIE7 SMR:Q2GIE7
STRING:Q2GIE7 GeneID:3931040 KEGG:aph:APH_1354 PATRIC:20951508
BioCyc:APHA212042:GHPM-1354-MONOMER Uniprot:Q2GIE7
Length = 354
Score = 132 (51.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 60/209 (28%), Positives = 93/209 (44%)
Query: 103 KAVIKITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNG 161
+AV ++TGS ALD LG GG+ G I E FG SGKT LA L V + N G
Sbjct: 37 EAVECVSTGSIALDAALGVGGLPRGRIIEIFGPESSGKTTLA--LHVIAEAQKN----GG 90
Query: 162 KVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEP 221
A+ID E D + A + G+ G ++I ++ T E +++ L + +
Sbjct: 91 ACAFIDAEHAL--DTLY--ARKLGVSVG----DLIVSQPDTGEQALHIVEHLVNSGAVDV 142
Query: 222 FRLLIVDSVIALFRVDFT-GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPG 280
+ V ++ ++ G + + + L L +LT I + N + NQ+ G
Sbjct: 143 IVVDSVAALTPRAEIEGDMGDQHMGLQARLLSHALRKLTSIVSKANCLLVFINQIRMKIG 202
Query: 281 GGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
V +P+ GG L +IRL RK
Sbjct: 203 --VVYGNPEVTTGGSALKFYTSIRLDIRK 229
>CGD|CAL0005415 [details] [associations]
symbol:RAD57 species:5476 "Candida albicans" [GO:0033062
"Rhp55-Rhp57 complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0030491 "heteroduplex formation" evidence=IEA]
[GO:0000707 "meiotic DNA recombinase assembly" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR020588 PROSITE:PS50162 CGD:CAL0005415 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 GO:GO:0008094 eggNOG:COG0468
InterPro:IPR013632 Pfam:PF08423 EMBL:AACQ01000076 EMBL:AACQ01000075
KO:K10958 RefSeq:XP_715957.1 RefSeq:XP_716015.1
ProteinModelPortal:Q5A2U1 GeneID:3642333 GeneID:3642354
KEGG:cal:CaO19.2174 KEGG:cal:CaO19.9720 Uniprot:Q5A2U1
Length = 511
Score = 117 (46.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/132 (31%), Positives = 57/132 (43%)
Query: 108 ITTGSQALDELLGGGIETGAITEAFGEFRSGKTQ-LAHTLCVCTQLPTNMRGGNGKVAYI 166
I+TG ++D LGGGI G +TE FG GK+ L L C + K YI
Sbjct: 85 ISTGLPSIDRELGGGIPIGEVTEIFGASGCGKSHFLFQLLSNCGK-----EFSTSKNIYI 139
Query: 167 DTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLG-LAAKMSEEP--FR 223
TE R+ R + LD I Y E Q ++L L K+ + +
Sbjct: 140 STESFLETKRLKDFIGRNSSNIDTDLDRISYIYCQDLESQDHILFTQLPLKLDSDKGKTK 199
Query: 224 LLIVDSVIALFR 235
LL++DS+ FR
Sbjct: 200 LLVLDSIAQHFR 211
Score = 58 (25.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 238 FTGRGELADRQQKLG---QMLSRLTKISEEFNVAVYMTNQV 275
F + A R KL Q+ L++++++FN+A+ + NQV
Sbjct: 253 FNKSQKYASRTAKLYYICQLYQHLSRLAQDFNIAIVIVNQV 293
>UNIPROTKB|P45383 [details] [associations]
symbol:recA "Protein RecA" species:243277 "Vibrio cholerae
O1 biovar El Tor str. N16961" [GO:0006281 "DNA repair"
evidence=IMP] [GO:0006310 "DNA recombination" evidence=IMP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 56/211 (26%), Positives = 91/211 (43%)
Query: 101 RRKAVIKITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGG 159
R V I+TGS +LD LG GG+ G I E FG SGKT L L Q R G
Sbjct: 32 RAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIAAAQ-----REG 86
Query: 160 NGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE 219
A+ID E P A++ G++ +D ++ ++ T E + LA +
Sbjct: 87 K-TCAFIDAEHALDP----VYAKKLGVN----IDELLVSQPDTGEQALEICDALARSGAV 137
Query: 220 EPFRLLIVDSVIALFRVDFT-GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIAD 278
+ + V ++ ++ G + + + L Q + +LT ++ N NQ+
Sbjct: 138 DVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMK 197
Query: 279 PGGGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
G V +P+ GG+ L ++RL R+
Sbjct: 198 IG--VMFGNPETTTGGNALKFYASVRLDIRR 226
>TIGR_CMR|VC_0543 [details] [associations]
symbol:VC_0543 "recA protein" species:686 "Vibrio cholerae
O1 biovar El Tor" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006310 "DNA
recombination" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
EMBL:X71969 EMBL:U10162 EMBL:L42384 PIR:E82310 PIR:S46274
RefSeq:NP_230194.1 ProteinModelPortal:P45383 SMR:P45383
PRIDE:P45383 DNASU:2615212 GeneID:2615212 KEGG:vch:VC0543
PATRIC:20080190 Uniprot:P45383
Length = 354
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 56/211 (26%), Positives = 91/211 (43%)
Query: 101 RRKAVIKITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGG 159
R V I+TGS +LD LG GG+ G I E FG SGKT L L Q R G
Sbjct: 32 RAMDVETISTGSLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIAAAQ-----REG 86
Query: 160 NGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE 219
A+ID E P A++ G++ +D ++ ++ T E + LA +
Sbjct: 87 K-TCAFIDAEHALDP----VYAKKLGVN----IDELLVSQPDTGEQALEICDALARSGAV 137
Query: 220 EPFRLLIVDSVIALFRVDFT-GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIAD 278
+ + V ++ ++ G + + + L Q + +LT ++ N NQ+
Sbjct: 138 DVIVVDSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFINQIRMK 197
Query: 279 PGGGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
G V +P+ GG+ L ++RL R+
Sbjct: 198 IG--VMFGNPETTTGGNALKFYASVRLDIRR 226
>TIGR_CMR|DET_1606 [details] [associations]
symbol:DET_1606 "recA protein" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003677 "DNA binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310
"DNA recombination" evidence=ISS] [GO:0008094 "DNA-dependent ATPase
activity" evidence=ISS] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003684 GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
RefSeq:YP_182301.1 ProteinModelPortal:Q3Z648 SMR:Q3Z648
STRING:Q3Z648 GeneID:3229079 KEGG:det:DET1606 PATRIC:21610224
BioCyc:DETH243164:GJNF-1607-MONOMER Uniprot:Q3Z648
Length = 337
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 57/210 (27%), Positives = 88/210 (41%)
Query: 102 RKAVIKITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGN 160
R+ V I T S ALD LG GGI G I+E FG SGKT LA + Q + G
Sbjct: 34 RQTVEFIPTSSLALDIALGVGGIPRGRISEIFGPEGSGKTTLAQHIIAQAQ-----KMGE 88
Query: 161 GKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEE 220
K AYID E P ++ G LD ++ ++ T E + L +
Sbjct: 89 -KAAYIDVEHALDP--------KYASTCGVNLDELLISQPDTGEEALGIAEELVRSTAIG 139
Query: 221 PFRLLIVDSVIALFRVDFT-GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADP 279
+ V +++ ++ G + + + + Q L +LT + AV NQ+
Sbjct: 140 VIVIDSVAALVPKAEIEGDMGDSHVGLQARLMSQALRKLTASIGQTRTAVIFINQLREKV 199
Query: 280 GGGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
G V +P+ GG L ++R+ R+
Sbjct: 200 G--VMFGNPEVTPGGRALKFYSSVRIDLRR 227
>UNIPROTKB|P0A7G6 [details] [associations]
symbol:recA species:83333 "Escherichia coli K-12"
[GO:0003697 "single-stranded DNA binding" evidence=IEA;IDA]
[GO:0048870 "cell motility" evidence=IMP] [GO:0006974 "response to
DNA damage stimulus" evidence=IEA;IEP] [GO:0009432 "SOS response"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0006259 "DNA metabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] HAMAP:MF_00268 InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020584 InterPro:IPR020587
InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006281 GO:GO:0006974 GO:GO:0006310
GO:GO:0003697 GO:GO:0048870 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 EMBL:V00328 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:TRKGAWY
PIR:G65049 RefSeq:NP_417179.1 RefSeq:YP_490908.1 PDB:1AA3 PDB:1N03
PDB:1REA PDB:1U94 PDB:1U98 PDB:1U99 PDB:1XMS PDB:1XMV PDB:2REB
PDB:2REC PDB:3CMT PDB:3CMU PDB:3CMV PDB:3CMW PDB:3CMX PDBsum:1AA3
PDBsum:1N03 PDBsum:1REA PDBsum:1U94 PDBsum:1U98 PDBsum:1U99
PDBsum:1XMS PDBsum:1XMV PDBsum:2REB PDBsum:2REC PDBsum:3CMT
PDBsum:3CMU PDBsum:3CMV PDBsum:3CMW PDBsum:3CMX
ProteinModelPortal:P0A7G6 SMR:P0A7G6 DIP:DIP-31832N IntAct:P0A7G6
MINT:MINT-1300726 SWISS-2DPAGE:P0A7G6 PaxDb:P0A7G6 PRIDE:P0A7G6
EnsemblBacteria:EBESCT00000004487 EnsemblBacteria:EBESCT00000004488
EnsemblBacteria:EBESCT00000017937 GeneID:12930224 GeneID:947170
KEGG:ecj:Y75_p2637 KEGG:eco:b2699 PATRIC:32120796 EchoBASE:EB0816
EcoGene:EG10823 BioCyc:EcoCyc:EG10823-MONOMER
BioCyc:ECOL316407:JW2669-MONOMER ChEMBL:CHEMBL3434
EvolutionaryTrace:P0A7G6 Genevestigator:P0A7G6 Uniprot:P0A7G6
Length = 353
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 56/211 (26%), Positives = 92/211 (43%)
Query: 101 RRKAVIKITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGG 159
R V I+TGS +LD LG GG+ G I E +G SGKT L TL V + R G
Sbjct: 34 RSMDVETISTGSLSLDIALGAGGLPMGRIVEIYGPESSGKTTL--TLQV---IAAAQREG 88
Query: 160 NGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE 219
A+ID E P A + G+D +DN++ ++ T E + LA +
Sbjct: 89 K-TCAFIDAEHALDPI----YARKLGVD----IDNLLCSQPDTGEQALEICDALARSGAV 139
Query: 220 EPFRLLIVDSVIALFRVDFT-GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIAD 278
+ + V ++ ++ G + + + Q + +L ++ N + NQ+
Sbjct: 140 DVIVVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMK 199
Query: 279 PGGGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
G V +P+ GG+ L ++RL R+
Sbjct: 200 IG--VMFGNPETTTGGNALKFYASVRLDIRR 228
>UNIPROTKB|P0A5U4 [details] [associations]
symbol:recA "Protein RecA" species:1773 "Mycobacterium
tuberculosis" [GO:0000150 "recombinase activity" evidence=IDA]
[GO:0000287 "magnesium ion binding" evidence=IDA] [GO:0000725
"recombinational repair" evidence=IMP] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0004520 "endodeoxyribonuclease
activity" evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=IGI;IEP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0009650 "UV protection" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0030145 "manganese
ion binding" evidence=IDA] [GO:0042148 "strand invasion"
evidence=IDA] [GO:0046677 "response to antibiotic" evidence=IEP]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR004042
InterPro:IPR006141 InterPro:IPR006142 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PRINTS:PR00379 PROSITE:PS00321
PROSITE:PS50162 PROSITE:PS50163 PROSITE:PS50817 PROSITE:PS50818
PROSITE:PS50819 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842580 GO:GO:0000287 GO:GO:0046677 GO:GO:0030145
GO:GO:0003697 GO:GO:0006314 GO:GO:0004520 GO:GO:0009650
GO:GO:0008094 GO:GO:0009432 GO:GO:0000725 InterPro:IPR003586
InterPro:IPR003587 SMART:SM00305 SMART:SM00306 GO:GO:0016539
GO:GO:0000150 TIGRFAMs:TIGR01443 TIGRFAMs:TIGR01445 GO:GO:0042148
KO:K03553 Gene3D:3.30.250.10 InterPro:IPR023400
PANTHER:PTHR22942:SF1 SUPFAM:SSF54752 TIGRFAMs:TIGR02012
EMBL:X58485 EMBL:AJ000012 EMBL:AJ000011 PIR:S18206
RefSeq:NP_217253.1 RefSeq:NP_337313.1 RefSeq:YP_006516181.1
PDB:1G18 PDB:1G19 PDB:1MO3 PDB:1MO4 PDB:1MO5 PDB:1MO6 PDB:2IMZ
PDB:2IN0 PDB:2IN8 PDB:2IN9 PDB:2L8L PDB:3IFJ PDB:3IGD PDBsum:1G18
PDBsum:1G19 PDBsum:1MO3 PDBsum:1MO4 PDBsum:1MO5 PDBsum:1MO6
PDBsum:2IMZ PDBsum:2IN0 PDBsum:2IN8 PDBsum:2IN9 PDBsum:2L8L
PDBsum:3IFJ PDBsum:3IGD ProteinModelPortal:P0A5U4 SMR:P0A5U4
MEROPS:N10.009 PRIDE:P0A5U4 EnsemblBacteria:EBMYCT00000000048
EnsemblBacteria:EBMYCT00000072309 GeneID:13319464 GeneID:888371
GeneID:925483 KEGG:mtc:MT2806 KEGG:mtu:Rv2737c KEGG:mtv:RVBD_2737c
PATRIC:18127918 TubercuList:Rv2737c eggNOG:COG1372
ProtClustDB:PRK09519 BindingDB:P0A5U4 ChEMBL:CHEMBL1741171
EvolutionaryTrace:P0A5U4 Uniprot:P0A5U4
Length = 790
Score = 129 (50.5 bits), Expect = 5.2e-05, P = 5.2e-05
Identities = 62/239 (25%), Positives = 107/239 (44%)
Query: 78 EKICEAAEKIVNFGYITGSDALL---RRKAVIKITTGSQALDELLG-GGIETGAITEAFG 133
EK E A + Y GS L R+ + I TGS ALD LG GG+ G + E +G
Sbjct: 8 EKALELAVAQIEKSYGKGSVMRLGDEARQPISVIPTGSIALDVALGIGGLPRGRVIEIYG 67
Query: 134 EFRSGKTQLA-HTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVL 192
SGKT +A H + N + G A+ID E PD A++ G+D
Sbjct: 68 PESSGKTTVALHAVA-------NAQAAGGVAAFIDAEHALDPD----YAKKLGVDT---- 112
Query: 193 DNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFT-GRGELADRQQKL 251
D+++ ++ T E + L + + + V +++ ++ G + + + +
Sbjct: 113 DSLLVSQPDTGEQALEIADMLIRSGALDIVVIDSVAALVPRAELEGEMGDSHVGLQARLM 172
Query: 252 GQMLSRLT-KISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
Q L ++T ++ A+++ NQ + D G +F S P+ GG L ++R+ R+
Sbjct: 173 SQALRKMTGALNNSGTTAIFI-NQ-LRDKIGVMFGS-PETTTGGKALKFYASVRMDVRR 228
>RGD|1306944 [details] [associations]
symbol:Rad51d "RAD51 homolog D (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 RGD:1306944
GO:GO:0005524 GO:GO:0003677 GO:GO:0006259 EMBL:CH473948
GO:GO:0008094 InterPro:IPR013632 Pfam:PF08423 UniGene:Rn.206266
IPI:IPI00782474 Ensembl:ENSRNOT00000055971 Uniprot:D4A2C5
Length = 233
Score = 120 (47.3 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 41/151 (27%), Positives = 71/151 (47%)
Query: 93 ITGSDALLRRKAVIKI-TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQ 151
+ G+D K I +TG +LD+LL G+ TG +TE G SGKTQ+ LCV
Sbjct: 66 LNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVC--LCVAAN 123
Query: 152 LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQYN 208
+ +++ V Y+D+ G R++ + + D + L I ++ +
Sbjct: 124 VAHSLQQN---VLYVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQMLD 180
Query: 209 LLLGLAAKMSEEP------FRLLIVDSVIAL 233
+L L M+++ +++IVDSV A+
Sbjct: 181 MLQDLRGTMAQQATASSGTVKVVIVDSVTAV 211
>TIGR_CMR|SO_3430 [details] [associations]
symbol:SO_3430 "recA protein" species:211586 "Shewanella
oneidensis MR-1" [GO:0006310 "DNA recombination" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0009432 "SOS response" evidence=ISS] HAMAP:MF_00268
InterPro:IPR003593 InterPro:IPR013765 InterPro:IPR020584
InterPro:IPR020587 InterPro:IPR020588 Pfam:PF00154 PRINTS:PR00142
PROSITE:PS00321 PROSITE:PS50162 PROSITE:PS50163 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0006281 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0006310 GO:GO:0003697 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553
Gene3D:3.30.250.10 InterPro:IPR023400 PANTHER:PTHR22942:SF1
SUPFAM:SSF54752 TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 OMA:MLIFINQ
RefSeq:NP_718983.1 ProteinModelPortal:Q8EBS0 GeneID:1171105
KEGG:son:SO_3430 PATRIC:23526548 Uniprot:Q8EBS0
Length = 357
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 53/211 (25%), Positives = 90/211 (42%)
Query: 101 RRKAVIKITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGG 159
R V I+TGS +LD LG GG+ G I E +G SGKT L + Q R G
Sbjct: 34 RSMDVETISTGSLSLDVALGAGGLPMGRIVEIYGPESSGKTTLTLEVIAAAQ-----REG 88
Query: 160 NGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSE 219
A+ID E P A++ G+D +DN++ ++ T E + L +
Sbjct: 89 K-TCAFIDAEHALDPI----YAKKLGVD----IDNLLCSQPDTGEQALEICDALTRSGAV 139
Query: 220 EPFRLLIVDSVIALFRVDFT-GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIAD 278
+ + V ++ ++ G + + + Q + +L ++ N + NQ+
Sbjct: 140 DVIIVDSVAALTPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMK 199
Query: 279 PGGGVFISDPKKPAGGHVLAHAVTIRLMFRK 309
G V +P+ GG+ L ++RL R+
Sbjct: 200 IG--VMFGNPETTTGGNALKFYASVRLDIRR 228
>UNIPROTKB|P16971 [details] [associations]
symbol:recA "Protein RecA" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0003697 EMBL:AL009126
GenomeReviews:AL009126_GR GO:GO:0009295 GO:GO:0008094 GO:GO:0009432
eggNOG:COG0468 HOGENOM:HOG000264120 KO:K03553 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 EMBL:X52132 EMBL:U87792
EMBL:U56238 PIR:S10370 RefSeq:NP_389576.2 ProteinModelPortal:P16971
SMR:P16971 IntAct:P16971 EnsemblBacteria:EBBACT00000002648
GeneID:939497 KEGG:bsu:BSU16940 PATRIC:18975195 GenoList:BSU16940
BioCyc:BSUB:BSU16940-MONOMER Uniprot:P16971
Length = 348
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 61/245 (24%), Positives = 111/245 (45%)
Query: 74 EAKVEKICEAAEKIVNFGYITGSDALLRRKAVIKITT---GSQALDELLG-GGIETGAIT 129
+A ++ + EK FG GS L K +I+T GS ALD LG GG G I
Sbjct: 5 QAALDMALKQIEK--QFG--KGSIMKLGEKTDTRISTVPSGSLALDTALGIGGYPRGRII 60
Query: 130 EAFGEFRSGKTQLA-HTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP 188
E +G SGKT +A H + Q +GG + A+ID E P A++ G++
Sbjct: 61 EVYGPESSGKTTVALHAIAEVQQ-----QGG--QAAFIDAEHALDP----VYAQKLGVN- 108
Query: 189 GAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLIVDSVIALFRVDFT-GRGELADR 247
++ ++ ++ T E + L + + + V +++ ++ G + +
Sbjct: 109 ---IEELLLSQPDTGEQALEIAEALVRSGAVDIVVVDSVAALVPKAEIEGDMGDSHVGLQ 165
Query: 248 QQKLGQMLSRLT-KISEEFNVAVYMTNQVIADPGGGVFISDPKKPAGGHVLAHAVTIRLM 306
+ + Q L +L+ I++ +A+++ NQ+ G V +P+ GG L ++RL
Sbjct: 166 ARLMSQALRKLSGAINKSKTIAIFI-NQIREKVG--VMFGNPETTPGGRALKFYSSVRLE 222
Query: 307 FRKGK 311
R+ +
Sbjct: 223 VRRAE 227
>UNIPROTKB|K7EN92 [details] [associations]
symbol:RAD51D "DNA repair protein RAD51 homolog 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic
process" evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 EMBL:AC022916
HGNC:HGNC:9823 Ensembl:ENST00000592577 Uniprot:K7EN92
Length = 249
Score = 118 (46.6 bits), Expect = 0.00012, P = 0.00012
Identities = 47/188 (25%), Positives = 84/188 (44%)
Query: 93 ITGSDALLRRKAVIKI-TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQ 151
+ G+D K I +TG +LD+LL G+ TG +TE G SGKTQ+ C+C
Sbjct: 68 VNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGEVTEIVGGPGSGKTQV----CLC-- 121
Query: 152 LPTNMRGG-NGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQY 207
+ N+ G V Y+D+ G R++ + + D L I A+
Sbjct: 122 MAANVAHGLQQNVLYVDSNGGLTASRLLQLLQAKTQDEEEQAEALRRIQVVHAFDIFQML 181
Query: 208 NLLLGLAAKMSEE------PFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKI 261
++L L ++++ ++++VDSV A+ G G+ + + Q+ L +
Sbjct: 182 DVLQELRGTVAQQVTGSSGTVKVVVVDSVTAVVS-PLLG-GQQREGLALMMQLARELKTL 239
Query: 262 SEEFNVAV 269
+ + +AV
Sbjct: 240 ARDLGMAV 247
>UNIPROTKB|G3V399 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:AL049840 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V399 SMR:G3V399 Ensembl:ENST00000553361
ArrayExpress:G3V399 Bgee:G3V399 Uniprot:G3V399
Length = 150
Score = 106 (42.4 bits), Expect = 0.00016, P = 0.00016
Identities = 25/65 (38%), Positives = 32/65 (49%)
Query: 107 KITTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYI 166
+++ G LD LL GG+ ITE G +GKTQLA LC+ Q P G + Y
Sbjct: 81 RLSLGCPVLDALLRGGLPLDGITELAGRSSAGKTQLALQLCLAVQFPRQHGGLEAEWQYF 140
Query: 167 DTEGT 171
GT
Sbjct: 141 FIGGT 145
>TIGR_CMR|SPO_2034 [details] [associations]
symbol:SPO_2034 "recA protein" species:246200 "Ruegeria
pomeroyi DSS-3" [GO:0003677 "DNA binding" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0009432 "SOS response" evidence=ISS]
HAMAP:MF_00268 InterPro:IPR003593 InterPro:IPR013765
InterPro:IPR020584 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005524 GO:GO:0005737
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006281 GO:GO:0006310
GO:GO:0003697 GO:GO:0008094 GO:GO:0009432 eggNOG:COG0468
HOGENOM:HOG000264120 KO:K03553 OMA:KAFFREH Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 ProtClustDB:PRK09354 RefSeq:YP_167265.1
ProteinModelPortal:Q5LRU0 SMR:Q5LRU0 PRIDE:Q5LRU0 GeneID:3193665
KEGG:sil:SPO2034 PATRIC:23377403 Uniprot:Q5LRU0
Length = 347
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 54/204 (26%), Positives = 84/204 (41%)
Query: 109 TTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLAHTL-CVCTQLPTNMRGGNGKVAYI 166
+TGS LD LG GG+ G I E +G SGKT L TL C+ Q RGG A++
Sbjct: 45 STGSLGLDIALGIGGLPMGRIVEIYGPESSGKTTL--TLHCIAEQ---QKRGG--VCAFV 97
Query: 167 DTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMSEEPFRLLI 226
D E P A + G+D LD ++ ++ T E + L + +
Sbjct: 98 DAEHALDPQ----YARKLGVD----LDELLISQPDTGEQALEITDTLVRSGAVNMVVVDS 149
Query: 227 VDSVIALFRVDFT-GRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQVIADPGGGVFI 285
V ++ ++ G + + + Q + +LT V NQ+ G V
Sbjct: 150 VAALTPKSELEGDMGDSSVGVHARLMSQAMRKLTGSISRSKCMVIFINQIRMKIG--VMF 207
Query: 286 SDPKKPAGGHVLAHAVTIRLMFRK 309
P+ GG+ L ++RL R+
Sbjct: 208 GSPETTTGGNALKFYSSVRLDIRR 231
>UNIPROTKB|O43543 [details] [associations]
symbol:XRCC2 "DNA repair protein XRCC2" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=IEA] [GO:0001701 "in utero
embryonic development" evidence=IEA] [GO:0010165 "response to
X-ray" evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0050769 "positive regulation of
neurogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007126 "meiosis" evidence=TAS] [GO:0006281 "DNA repair"
evidence=IGI] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0003677 GO:GO:0006281
GO:GO:0001701 GO:GO:0043524 EMBL:CH471173 GO:GO:0010332
GO:GO:0050769 GO:GO:0000724 GO:GO:0010165 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 eggNOG:NOG279678 KO:K10879
EMBL:AF035587 EMBL:AC003109 EMBL:Y08837 EMBL:Y17033 EMBL:AF520762
EMBL:AK313607 EMBL:BC042137 IPI:IPI00306229 RefSeq:NP_005422.1
UniGene:Hs.647093 ProteinModelPortal:O43543 SMR:O43543
DIP:DIP-24242N IntAct:O43543 MINT:MINT-137755 STRING:O43543
PhosphoSite:O43543 PRIDE:O43543 DNASU:7516 Ensembl:ENST00000359321
GeneID:7516 KEGG:hsa:7516 UCSC:uc003wld.3 CTD:7516
GeneCards:GC07M152341 HGNC:HGNC:12829 MIM:600375 neXtProt:NX_O43543
Orphanet:227535 PharmGKB:PA37421 HOGENOM:HOG000004802
HOVERGEN:HBG079347 InParanoid:O43543 OMA:DTDYHFD OrthoDB:EOG4X6C91
PhylomeDB:O43543 ChiTaRS:XRCC2 GenomeRNAi:7516 NextBio:29411
Bgee:O43543 CleanEx:HS_XRCC2 Genevestigator:O43543
GermOnline:ENSG00000196584 Uniprot:O43543
Length = 280
Score = 112 (44.5 bits), Expect = 0.00077, P = 0.00077
Identities = 43/160 (26%), Positives = 72/160 (45%)
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE-RF 184
G I E G +GKT++ + L LP + G +V +IDT+ F R+V I E R
Sbjct: 41 GDILEFHGPEGTGKTEMLYHLTARCILPKSEGGLEVEVLFIDTDYHFDMLRLVTILEHRL 100
Query: 185 GMDPGAVLDN------IIYARAYTYEHQYNLLLGLAAKMSEEP-FRLLIVDSVIALFRVD 237
++ ++Y + T H L L + P LLI+DS+ A + +D
Sbjct: 101 SQSSEEIIKYCLGRFFLVYCSSST--HLLLTLYSLESMFCSHPSLCLLILDSLSAFYWID 158
Query: 238 FTGRGELADRQQKLGQMLSR-LTKISEEFNVAVYMTNQVI 276
GE + Q+ + S+ L K+ ++ + ++ T Q I
Sbjct: 159 RVNGGESVNLQESTLRKCSQCLEKLVNDYRLVLFATTQTI 198
>TAIR|locus:2100038 [details] [associations]
symbol:RECA3 "RECA homolog 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006310 "DNA recombination"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA;ISS] [GO:0009432 "SOS response" evidence=IEA;ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000002 "mitochondrial genome maintenance" evidence=IGI]
[GO:0009408 "response to heat" evidence=IGI] InterPro:IPR003593
InterPro:IPR013765 InterPro:IPR020587 InterPro:IPR020588
Pfam:PF00154 PRINTS:PR00142 PROSITE:PS00321 PROSITE:PS50162
PROSITE:PS50163 SMART:SM00382 GO:GO:0005739 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006281 GO:GO:0009408
GO:GO:0006310 GO:GO:0003697 GO:GO:0000002 GO:GO:0008094
GO:GO:0009432 eggNOG:COG0468 EMBL:AC010927 UniGene:At.39982
UniGene:At.48640 HOGENOM:HOG000264120 Gene3D:3.30.250.10
InterPro:IPR023400 PANTHER:PTHR22942:SF1 SUPFAM:SSF54752
TIGRFAMs:TIGR02012 EMBL:AY072877 EMBL:AY136400 EMBL:BT000214
IPI:IPI00542438 RefSeq:NP_187625.2 ProteinModelPortal:Q8RY99
SMR:Q8RY99 IntAct:Q8RY99 PRIDE:Q8RY99 EnsemblPlants:AT3G10140.1
GeneID:820177 KEGG:ath:AT3G10140 GeneFarm:2673 TAIR:At3g10140
InParanoid:Q8RY99 OMA:CRSETLI PhylomeDB:Q8RY99
ProtClustDB:CLSN2722126 Genevestigator:Q8RY99 GermOnline:AT3G10140
Uniprot:Q8RY99
Length = 389
Score = 114 (45.2 bits), Expect = 0.00085, P = 0.00085
Identities = 55/215 (25%), Positives = 90/215 (41%)
Query: 101 RRKAVIKITTGSQALDELLG-GGIETGAITEAFGEFRSGKTQLA-HTLCVCTQLPTNMRG 158
R++ V I+TGS LD LG GG+ G + E +G+ SGKT LA H + +L
Sbjct: 90 RKRRVSVISTGSLNLDLALGVGGLPKGRMVEVYGKEASGKTTLALHIIKEAQKL------ 143
Query: 159 GNGKVAYIDTEGTFRPDRIVPIAERFGMDPGAVLDNIIYARAYTYEHQYNLLLGLAAKMS 218
G AY+D E P +AE G++ + ++ +R + E N++ L S
Sbjct: 144 -GGYCAYLDAENAMDPS----LAESIGVNT----EELLISRPSSAEKMLNIVDVLTKSGS 194
Query: 219 EEPFRLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFN-VAVYMTNQVIA 277
+ + V ++ +D D Q ++ R S ++ + NQV +
Sbjct: 195 VDVIVVDSVAALAPQCELDAPVGERYRDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRS 254
Query: 278 DPGGGVFISDPKK-PAGGHVLAHAVTIRL-MFRKG 310
+ ++ GG+ L IRL M R G
Sbjct: 255 HVKSNMHFPHAEEVTCGGNALPFHAAIRLKMIRTG 289
>UNIPROTKB|G3V3Q2 [details] [associations]
symbol:XRCC3 "DNA repair protein XRCC3" species:9606 "Homo
sapiens" [GO:0010033 "response to organic substance" evidence=IEA]
EMBL:AL049840 InterPro:IPR013632 Pfam:PF08423 HGNC:HGNC:12830
ProteinModelPortal:G3V3Q2 SMR:G3V3Q2 Ensembl:ENST00000554974
ArrayExpress:G3V3Q2 Bgee:G3V3Q2 Uniprot:G3V3Q2
Length = 141
Score = 99 (39.9 bits), Expect = 0.00093, P = 0.00093
Identities = 39/137 (28%), Positives = 67/137 (48%)
Query: 223 RLLIVDSVIALFRVDFTGRGELADRQQKLGQMLSRLTKISEEFNVAVYMTNQV---IADP 279
RL+++DSV A FR +F + A R + L + + L ++S F V NQV + +
Sbjct: 3 RLVVIDSVAAPFRCEFDSQAS-APRARHLQSLGATLRELSSAFQSPVLCINQVTEAMEEQ 61
Query: 280 G---GGVFISDPK-KPAGGHVLAHAVTIRLMFRKGKGEQ-------RVCKVFDAPNLPEA 328
G G + D + PA G A+ + +RL+ + + E+ R +V AP+LP +
Sbjct: 62 GAAHGPLGFWDERVSPALGITWANQLLVRLLADRLREEEAALGCPARTLRVLSAPHLPPS 121
Query: 329 EAISFSYHIILIKITPG 345
S++ ++ TPG
Sbjct: 122 SC-SYTISAEGVRGTPG 137
>UNIPROTKB|D3ZZP3 [details] [associations]
symbol:Rad51l3 "Protein Rad51l3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006259 "DNA metabolic process"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR020588 PROSITE:PS50162 GO:GO:0005524
GO:GO:0003677 GO:GO:0006259 EMBL:CH473948 GO:GO:0008094
InterPro:IPR013632 Pfam:PF08423 IPI:IPI00195181 UniGene:Rn.206266
Ensembl:ENSRNOT00000011912 Uniprot:D3ZZP3
Length = 275
Score = 111 (44.1 bits), Expect = 0.00095, P = 0.00095
Identities = 35/132 (26%), Positives = 61/132 (46%)
Query: 93 ITGSDALLRRKAVIKI-TTGSQALDELLGGGIETGAITEAFGEFRSGKTQLAHTLCVCTQ 151
+ G+D K I +TG +LD+LL G+ TG +TE G SGKTQ+ LCV
Sbjct: 66 LNGADLYEELKTSTAILSTGIGSLDKLLDAGLYTGELTEIVGGPGSGKTQVC--LCVAAN 123
Query: 152 LPTNMRGGNGKVAYIDTEGTFRPDRIVPIAERFGMDP---GAVLDNIIYARAYTYEHQYN 208
+ +++ V Y+D+ G R++ + + D + L I ++ +
Sbjct: 124 VAHSLQQN---VLYVDSNGGMTASRLLQLLQARTQDEEKQASALQRIQVVHSFDIFQMLD 180
Query: 209 LLLGLAAKMSEE 220
+L L M+++
Sbjct: 181 MLQDLRGTMAQQ 192
>MGI|MGI:1927345 [details] [associations]
symbol:Xrcc2 "X-ray repair complementing defective repair in
Chinese hamster cells 2" species:10090 "Mus musculus" [GO:0000724
"double-strand break repair via homologous recombination"
evidence=IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006259 "DNA metabolic process" evidence=IEA] [GO:0006281 "DNA
repair" evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IMP] [GO:0010332 "response
to gamma radiation" evidence=IMP] [GO:0043524 "negative regulation
of neuron apoptotic process" evidence=IGI] [GO:0050769 "positive
regulation of neurogenesis" evidence=IMP] InterPro:IPR020588
PROSITE:PS50162 MGI:MGI:1927345 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0001701 GO:GO:0043524 GO:GO:0010332
GO:GO:0050769 GO:GO:0000724 GO:GO:0010165 GO:GO:0008094
eggNOG:COG0468 InterPro:IPR013632 Pfam:PF08423 KO:K10879 CTD:7516
HOGENOM:HOG000004802 HOVERGEN:HBG079347 OMA:DTDYHFD
OrthoDB:EOG4X6C91 EMBL:Y17040 EMBL:AK020192 EMBL:AK014963
EMBL:BC033417 IPI:IPI00317967 RefSeq:NP_065595.2 UniGene:Mm.143767
ProteinModelPortal:Q9CX47 SMR:Q9CX47 STRING:Q9CX47 PRIDE:Q9CX47
Ensembl:ENSMUST00000030773 GeneID:57434 KEGG:mmu:57434
UCSC:uc008wta.1 GeneTree:ENSGT00390000020445 InParanoid:Q9CX47
NextBio:313806 Bgee:Q9CX47 Genevestigator:Q9CX47
GermOnline:ENSMUSG00000028933 Uniprot:Q9CX47
Length = 278
Score = 111 (44.1 bits), Expect = 0.00098, P = 0.00098
Identities = 46/163 (28%), Positives = 73/163 (44%)
Query: 126 GAITEAFGEFRSGKTQLAHTLCVCTQLPTNMRGGNGKVAYIDTEGTFRPDRIVPIAE-RF 184
G I E G +GKT++ + L LP + G +V +IDT+ F R+V + E R
Sbjct: 41 GDIFEFHGPEGTGKTEMLYHLTARCILPKSEGGLQIEVLFIDTDYHFDMLRLVTVLEHRL 100
Query: 185 GMDPGAVLDNIIYARAY-TY-EHQYNLLL---GLAAKMSEEP-FRLLIVDSVIALFRVDF 238
+ + AR + Y LLL L A + P LLIVDS+ + + +D
Sbjct: 101 SQSSEEAM-KLCLARLFLAYCSSSMQLLLTLHSLEALLCSRPSLCLLIVDSLSSFYWIDR 159
Query: 239 TGRGELADRQQKLGQMLSRLT-KISEEFNVAVYMTNQVIADPG 280
GE Q+ Q S+L ++ E+ + ++ T Q + G
Sbjct: 160 VSGGESVALQESTLQKCSQLLERLVTEYRLLLFATTQSLMQKG 202
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.138 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 352 352 0.00078 117 3 11 22 0.39 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 140
No. of states in DFA: 591 (63 KB)
Total size of DFA: 196 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.72u 0.19s 27.91t Elapsed: 00:00:01
Total cpu time: 27.75u 0.19s 27.94t Elapsed: 00:00:01
Start: Sat May 11 06:28:42 2013 End: Sat May 11 06:28:43 2013
WARNINGS ISSUED: 1