BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047391
(300 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2O7R|A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With
Acyl Adduct
pdb|2O7V|A Chain A, Carboxylesterase Aecxe1 From Actinidia Eriantha Covalently
Inhibited By Paraoxon
Length = 338
Score = 120 bits (302), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 128/243 (52%), Gaps = 18/243 (7%)
Query: 42 DPKTS--VDSNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYH 99
DP +S V + D+ +P +N RL++P++ + KLPLVVY +GGGF ++ A +H
Sbjct: 46 DPTSSSPVLTKDLALNPLHNTFVRLFLPRHALYNSAKLPLVVYFHGGGFILFSAASTIFH 105
Query: 100 NYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADF 159
++ + A V+ VD+R APEH +P A++D+ AL+W+ D +WL ++ADF
Sbjct: 106 DFCCEMAVHAGVVIASVDYRLAPEHRLPAAYDDAMEALQWIKDSRD-----EWLTNFADF 160
Query: 160 ERVFIYGDNAGGNIAHHKVMR---LPREILDGFNVVGIVLAHTYFWGKEPVGDET-IDAE 215
FI G++AGGNIA+H +R + E+L + G+VL F G + G E + +
Sbjct: 161 SNCFIMGESAGGNIAYHAGLRAAAVADELLP-LKIKGLVLDEPGFGGSKRTGSELRLAND 219
Query: 216 TRAS---IEKMWQAACPGTSGCDDLLINPFVGSSLANLECKRLKESGWGGEAEIIESKGE 272
+R ++ +W+ + P + D NP S +++ GW ++ G+
Sbjct: 220 SRLPTFVLDLIWELSLPMGADRDHEYCNP-TAESEPLYSFDKIRSLGW--RVMVVGCHGD 276
Query: 273 PHI 275
P I
Sbjct: 277 PMI 279
>pdb|3EBL|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3EBL|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga4
pdb|3ED1|A Chain A, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|B Chain B, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|C Chain C, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|D Chain D, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|E Chain E, Crystal Structure Of Rice Gid1 Complexed With Ga3
pdb|3ED1|F Chain F, Crystal Structure Of Rice Gid1 Complexed With Ga3
Length = 365
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 38/246 (15%)
Query: 25 DGRVERLVGNEI---VPPSFDPKTSVDSNDVVYSPENNLSARLY---------------- 65
DG ER +G + VP + P V S D + L R+Y
Sbjct: 37 DGTFERDLGEYLDRRVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVT 96
Query: 66 ---IPKNTNNPNHK-LPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRA 121
+ T+ P + P++++ +GG F A Y + V +K + V V++RRA
Sbjct: 97 RPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRA 156
Query: 122 PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFE-RVFIYGDNAGGNIAHHKVMR 180
PEH PCA++D W ALKWV S + ++ D + RVF+ GD++GGNIAHH +R
Sbjct: 157 PEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVR 209
Query: 181 LPREILDGFNVVGIVLAHTYFWGKEPVGDE-TIDAETRASIEKM---WQAACPGTSGCDD 236
E G V G +L + F G E E +D + +++ W+A P + D
Sbjct: 210 AADE---GVKVCGNILLNAMFGGTERTESERRLDGKYFVTLQDRDWYWKAYLPEDADRDH 266
Query: 237 LLINPF 242
NPF
Sbjct: 267 PACNPF 272
>pdb|2ZSH|A Chain A, Structural Basis Of Gibberellin(Ga3)-Induced Della
Recognition By The Gibberellin Receptor
pdb|2ZSI|A Chain A, Structural Basis Of Gibberellin(Ga4)-Induced Della
Recognition By The Gibberellin Receptor
Length = 351
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 28/224 (12%)
Query: 37 VPPSFDPKTSVDSNDVVYSPENNLSARLYIPKNTNNPN-------------HKLPLVVYI 83
V + +P V S DV+ NL +R+Y P + +P++++
Sbjct: 60 VTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFF 119
Query: 84 YGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASH 143
+GG F A Y LV K + V V++RRAPE+P PCA++D W AL WV S
Sbjct: 120 HGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS- 178
Query: 144 VDGQGPEDWLNHYADFE-RVFIYGDNAGGNIAHHKVMRLPREILDGFNVVGIVLAHTYFW 202
WL D + +F+ GD++GGNIAH+ +R G +V+G +L + F
Sbjct: 179 ------RSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES---GIDVLGNILLNPMFG 229
Query: 203 GKEPVGDE-TIDAETRASIEKM---WQAACPGTSGCDDLLINPF 242
G E E ++D + ++ W+A P + NPF
Sbjct: 230 GNERTESEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPF 273
>pdb|2C7B|A Chain A, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
pdb|2C7B|B Chain B, The Crystal Structure Of Este1, A New Thermophilic And
Thermostable Carboxylesterase Cloned From A Metagenomic
Library
Length = 311
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 63/117 (53%), Gaps = 14/117 (11%)
Query: 58 NNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVD 117
++ AR+Y PK LP V+Y +GGGF F T+ + L + + V VD
Sbjct: 58 GSIRARVYFPKKAAG----LPAVLYYHGGGFV--FGSIETHDHICRRLSRLSDSVVVSVD 111
Query: 118 HRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIA 174
+R APE+ P A ED++AALKWVA D G D +R+ + GD+AGGN+A
Sbjct: 112 YRLAPEYKFPTAVEDAYAALKWVADRADELG--------VDPDRIAVAGDSAGGNLA 160
>pdb|2YH2|A Chain A, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|B Chain B, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|C Chain C, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|2YH2|D Chain D, Pyrobaculum Calidifontis Esterase Monoclinic Form
pdb|3ZWQ|A Chain A, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
pdb|3ZWQ|B Chain B, Hyperthermophilic Esterase From The Archeon Pyrobaculum
Calidifontis
Length = 313
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 14/115 (12%)
Query: 60 LSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHR 119
+ AR+Y P++ +LP VVY +GGGF + T+ + L + + + V VD+R
Sbjct: 63 IRARVYRPRD----GERLPAVVYYHGGGFVL--GSVETHDHVCRRLANLSGAVVVSVDYR 116
Query: 120 RAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIA 174
APEH P A ED++ A KWVA + D G D ++ + GD+AGGN+A
Sbjct: 117 LAPEHKFPAAVEDAYDAAKWVADNYDKLG--------VDNGKIAVAGDSAGGNLA 163
>pdb|1QZ3|A Chain A, Crystal Structure Of Mutant M211sR215L OF CARBOXYLESTERASE
Est2 Complexed With Hexadecanesulfonate
pdb|1U4N|A Chain A, Crystal Structure Analysis Of The M211sR215L EST2 MUTANT
Length = 310
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 13/119 (10%)
Query: 56 PENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVF 115
P L R+Y P+ P P +VY +GGG+ + T+ L + + +
Sbjct: 56 PGRTLKVRMYRPEGVEPP---YPALVYYHGGGWVV--GDLETHDPVCRVLAKDGRAVVFS 110
Query: 116 VDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIA 174
VD+R APEH P A ED++ AL+W+A E + + D R+ + GD+AGGN+A
Sbjct: 111 VDYRLAPEHKFPAAVEDAYDALQWIA--------ERAADFHLDPARIAVGGDSAGGNLA 161
>pdb|1EVQ|A Chain A, The Crystal Structure Of The Thermophilic Carboxylesterase
Est2 From Alicyclobacillus Acidocaldarius
Length = 310
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 56 PENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVF 115
P L R Y P+ P P +VY +GGG+ + T+ L + + +
Sbjct: 56 PGRTLKVRXYRPEGVEPP---YPALVYYHGGGWVV--GDLETHDPVCRVLAKDGRAVVFS 110
Query: 116 VDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIA 174
VD+R APEH P A ED++ AL+W+A E + + D R+ + GD+AGGN+A
Sbjct: 111 VDYRLAPEHKFPAAVEDAYDALQWIA--------ERAADFHLDPARIAVGGDSAGGNLA 161
>pdb|2HM7|A Chain A, Crystal Structure Analysis Of The G84s Est2 Mutant
Length = 310
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 56 PENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVF 115
P L R+Y P+ P P +VY +GG + + T+ L + + +
Sbjct: 56 PGRTLKVRMYRPEGVEPP---YPALVYYHGGSWVV--GDLETHDPVCRVLAKDGRAVVFS 110
Query: 116 VDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIA 174
VD+R APEH P A ED++ AL+W+A E + + D R+ + GD+AGGN+A
Sbjct: 111 VDYRLAPEHKFPAAVEDAYDALQWIA--------ERAADFHLDPARIAVGGDSAGGNLA 161
>pdb|3AIN|A Chain A, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|B Chain B, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|C Chain C, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIN|D Chain D, R267g Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 40 SFDPKTSVDSNDVVYSP--ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPT 97
S P+ V + + P E N+ AR+Y PK T P ++VY +GGGF + +
Sbjct: 55 SLTPREEVGKIEDITIPGSETNIKARVYYPK-TQGP---YGVLVYYHGGGFVL--GDIES 108
Query: 98 YHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYA 157
Y + + + + + VD+R APE+ P A DS+ ALKWV ++ E + Y
Sbjct: 109 YDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNN-----SEKFNGKYG 163
Query: 158 DFERVFIYGDNAGGNIA 174
+ + GD+AGGN+A
Sbjct: 164 ----IAVGGDSAGGNLA 176
>pdb|3AIO|A Chain A, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|B Chain B, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|C Chain C, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIO|D Chain D, R267k Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 40 SFDPKTSVDSNDVVYSP--ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPT 97
S P+ V + + P E N+ AR+Y PK T P ++VY +GGGF + +
Sbjct: 55 SLTPREEVGKIEDITIPGSETNIKARVYYPK-TQGP---YGVLVYYHGGGFVL--GDIES 108
Query: 98 YHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYA 157
Y + + + + + VD+R APE+ P A DS+ ALKWV ++ E + Y
Sbjct: 109 YDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNN-----SEKFNGKYG 163
Query: 158 DFERVFIYGDNAGGNIA 174
+ + GD+AGGN+A
Sbjct: 164 ----IAVGGDSAGGNLA 176
>pdb|3AIK|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIK|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIL|A Chain A, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|B Chain B, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|C Chain C, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
pdb|3AIL|D Chain D, Crystal Structure Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii Complexed With Paraoxon
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 40 SFDPKTSVDSNDVVYSP--ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPT 97
S P+ V + + P E N+ AR+Y PK T P ++VY +GGGF + +
Sbjct: 55 SLTPREEVGKIEDITIPGSETNIKARVYYPK-TQGP---YGVLVYYHGGGFVL--GDIES 108
Query: 98 YHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYA 157
Y + + + + + VD+R APE+ P A DS+ ALKWV ++ E + Y
Sbjct: 109 YDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNN-----SEKFNGKYG 163
Query: 158 DFERVFIYGDNAGGNIA 174
+ + GD+AGGN+A
Sbjct: 164 ----IAVGGDSAGGNLA 176
>pdb|3AIM|A Chain A, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|B Chain B, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|C Chain C, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
pdb|3AIM|D Chain D, R267e Mutant Of A Hsl-Like Carboxylesterase From
Sulfolobus Tokodaii
Length = 323
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 69/137 (50%), Gaps = 17/137 (12%)
Query: 40 SFDPKTSVDSNDVVYSP--ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPT 97
S P+ V + + P E N+ AR+Y PK T P ++VY +GGGF + +
Sbjct: 55 SLTPREEVGKIEDITIPGSETNIKARVYYPK-TQGP---YGVLVYYHGGGFVL--GDIES 108
Query: 98 YHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYA 157
Y + + + + + VD+R APE+ P A DS+ ALKWV ++ E + Y
Sbjct: 109 YDPLCRAITNSCQCVTISVDYRLAPENKFPAAVVDSFDALKWVYNN-----SEKFNGKYG 163
Query: 158 DFERVFIYGDNAGGNIA 174
+ + GD+AGGN+A
Sbjct: 164 ----IAVGGDSAGGNLA 176
>pdb|1JJI|A Chain A, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|B Chain B, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|C Chain C, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
pdb|1JJI|D Chain D, The Crystal Structure Of A Hyper-Thermophilic
Carboxylesterase From The Archaeon Archaeoglobus
Fulgidus
Length = 311
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 78 PLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAAL 137
P++VY +GGGF I ++ + + V VD+R APEH P A D + A
Sbjct: 80 PVLVYYHGGGFVI--CSIESHDALCRRIARLSNSTVVSVDYRLAPEHKFPAAVYDCYDAT 137
Query: 138 KWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIA 174
KWVA + + D ++F+ GD+AGGN+A
Sbjct: 138 KWVAENAE--------ELRIDPSKIFVGGDSAGGNLA 166
>pdb|3FAK|A Chain A, Structural And Functional Analysis Of A Hormone-Sensitive
Lipase Like Este5 From A Metagenome Library
pdb|3G9T|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Butyrate For 5sec
pdb|3G9U|A Chain A, Crystal Structure Of Este5, Was Soaked By P-nitrophenyl
Butyrate For 5min
pdb|3G9Z|A Chain A, Crystal Structure Of Este5, Was Soaked By P-Nitrophenyl
Caprylate
pdb|3H17|A Chain A, Crystal Structure Of Este5-Pmsf (I)
pdb|3H18|A Chain A, Crystal Structure Of Este5-pmsf (ii)
pdb|3H19|A Chain A, Crystal Structure Of Este5, Was Soaked By Methyl Alcohol
pdb|3H1A|A Chain A, Crystal Structure Of Este5, Was Soaked By Ethyl Alcohol
pdb|3H1B|A Chain A, Crystal Structure Of Este5, Was Soaked By Isopropyl
Alcohol
pdb|3L1H|A Chain A, Crystal Structure Of Este5, Was Soaked By Fecl3
pdb|3L1I|A Chain A, Crystal Structure Of Este5, Was Soaked By Cuso4
pdb|3L1J|A Chain A, Crystal Structure Of Este5, Was Soaked By Znso4
Length = 322
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 80 VVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKW 139
++Y++GGG+ + T+ + V + ++ A+ +D+R APEHP P A ED AA +W
Sbjct: 83 ILYLHGGGYVM--GSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRW 140
Query: 140 VASHVDGQGPEDWLNHYADFERVFIYGDNAGGNI 173
+ L+ + + I GD+AGG +
Sbjct: 141 L------------LDQGFKPQHLSISGDSAGGGL 162
>pdb|3V9A|A Chain A, Crystal Structure Of EsteraseLIPASE FROM UNCULTURED
BACTERIUM
Length = 309
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 80 VVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKW 139
++Y++GGG+ + T+ + V + ++ A+ +D+R APEHP P A ED AA +W
Sbjct: 70 ILYLHGGGYVM--GSINTHRSMVGEISRASQAAALLLDYRLAPEHPFPAAVEDGVAAYRW 127
Query: 140 VASHVDGQGPEDWLNHYADFERVFIYGDNAGGNI 173
+ L+ + + I GD+AGG +
Sbjct: 128 L------------LDQGFKPQHLSISGDSAGGGL 149
>pdb|1LZK|A Chain A, Bacterial Heroin Esterase Complex With Transition State
Analog Dimethylarsenic Acid
Length = 323
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 29 ERLVGNEIVPPSFDPKTSVDSNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGF 88
+ L+G + SFD + + + + + R P NT P +P++++I+GGGF
Sbjct: 34 DALIGAXLADLSFDGVSLRELSAPGLDGDPEVKIRFVTPDNTAGP---VPVLLWIHGGGF 90
Query: 89 CIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVDGQG 148
I A + + + E V++R APE P D +AAL ++ +H + G
Sbjct: 91 AIGTA--ESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELG 148
Query: 149 PEDWLNHYADFERVFIYGDNAGGNIAHHKVMR 180
D R+ + G +AGG +A V++
Sbjct: 149 --------IDPSRIAVGGQSAGGGLAAGTVLK 172
>pdb|1LZL|A Chain A, Bacterial Heroin Esterase
Length = 323
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 69/152 (45%), Gaps = 13/152 (8%)
Query: 29 ERLVGNEIVPPSFDPKTSVDSNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGF 88
+ L+G + SFD + + + + + R P NT P +P++++I+GGGF
Sbjct: 34 DALIGAMLADLSFDGVSLRELSAPGLDGDPEVKIRFVTPDNTAGP---VPVLLWIHGGGF 90
Query: 89 CIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVDGQG 148
I A + + + E V++R APE P D +AAL ++ +H + G
Sbjct: 91 AIGTA--ESSDPFCVEVARELGFAVANVEYRLAPETTFPGPVNDCYAALLYIHAHAEELG 148
Query: 149 PEDWLNHYADFERVFIYGDNAGGNIAHHKVMR 180
D R+ + G +AGG +A V++
Sbjct: 149 --------IDPSRIAVGGQSAGGGLAAGTVLK 172
>pdb|1JKM|B Chain B, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
pdb|1JKM|A Chain A, Brefeldin A Esterase, A Bacterial Homologue Of Human
Hormone Sensitive Lipase
Length = 361
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 68/174 (39%), Gaps = 29/174 (16%)
Query: 47 VDSNDVVYSPE-------NNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYH 99
D +DV S E N ++ ++ P LP +VY +GGG I + +
Sbjct: 75 TDRDDVETSTETILGVDGNEITLHVFRPAGVEG---VLPGLVYTHGGGMTILTTDNRVHR 131
Query: 100 NYVNTLVSEAKVIAVFVDHRRA----PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNH 155
+ L + V+ V VD R A HP P ED AA+ WV H + G
Sbjct: 132 RWCTDLAAAGSVV-VMVDFRNAWTAEGHHPFPSGVEDCLAAVLWVDEHRESLG------- 183
Query: 156 YADFERVFIYGDNAGGNIAHHKVMRLPR----EILDGFNVVGIVLAHTYFWGKE 205
V + G++ GGN+A + R + +DG ++ Y W E
Sbjct: 184 ---LSGVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYISGGYAWDHE 234
>pdb|3DNM|A Chain A, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|B Chain B, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|C Chain C, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
pdb|3DNM|D Chain D, Crystal Structure Hormone-Sensitive Lipase From A
Metagenome Library
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 80 VVYIYGGGFCIYFAFHPTYHNYVNT-LVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALK 138
++Y +GGG Y + P+ H + T L ++ +D+R APE+P P A +D AA +
Sbjct: 97 ILYFHGGG---YISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 153
Query: 139 WVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMR 180
+ L +R+ I GD+AGG + +++
Sbjct: 154 AL------------LKTAGSADRIIIAGDSAGGGLTTASMLK 183
>pdb|3QH4|A Chain A, Crystal Structure Of Esterase Lipw From Mycobacterium
Marinum
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 78 PLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAAL 137
P+VVY + GGF + T H L A+ V VD+R APEHP P A D+ L
Sbjct: 86 PVVVYCHAGGFAL--GNLDTDHRQCLELARRARCAVVSVDYRLAPEHPYPAALHDAIEVL 143
Query: 138 KWVASHVDGQG 148
WV + G
Sbjct: 144 TWVVGNATRLG 154
>pdb|3K6K|A Chain A, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|B Chain B, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|C Chain C, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
pdb|3K6K|D Chain D, Crystal Structure At 2.2 Angstrom Of Hsl-Homolog Este7
From A Metagenome Library
Length = 322
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 80 VVYIYGGGFCIYFAFHPTYHNYVNT-LVSEAKVIAVFVDHRRAPEHPVPCAHEDSWAALK 138
++Y +GGG Y + P+ H + T L ++ +D+R APE+P P A +D AA +
Sbjct: 83 ILYFHGGG---YISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAAYR 139
Query: 139 WVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMR 180
+ L +R+ I GD+AGG + +++
Sbjct: 140 AL------------LKTAGSADRIIIAGDSAGGGLTTASMLK 169
>pdb|1C7J|A Chain A, Pnb Esterase 56c8
Length = 489
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 46 SVDSNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTL 105
S+ ++ E+ L ++ P + P+ LP++V+I+GG F + P Y + L
Sbjct: 69 SLSYTELPRQSEDCLYVNVFAP---DTPSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKL 123
Query: 106 VSEAKVIAVFVDHRRAP-----------EHPVPCAHEDSWAALKWVASHVDGQGPEDWLN 154
++ +VI V +++R P + D AALKWV ++ G
Sbjct: 124 AAQGEVIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFG------ 177
Query: 155 HYADFERVFIYGDNAGG 171
D + V ++G++AGG
Sbjct: 178 --GDPDNVTVFGESAGG 192
>pdb|1QE3|A Chain A, Pnb Esterase
Length = 489
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 46 SVDSNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTL 105
S+ ++ E+ L ++ P + P+ LP++V+I+GG F + P Y + L
Sbjct: 69 SLSYTELPRQSEDCLYVNVFAP---DTPSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKL 123
Query: 106 VSEAKVIAVFVDHRRAP-----------EHPVPCAHEDSWAALKWVASHVDGQGPEDWLN 154
++ +VI V +++R P + D AALKWV ++ G
Sbjct: 124 AAQGEVIVVTLNYRLGPFGFLHLSSFDEAYSDNLGLLDQAAALKWVRENISAFG------ 177
Query: 155 HYADFERVFIYGDNAGG 171
D + V ++G++AGG
Sbjct: 178 --GDPDNVTVFGESAGG 192
>pdb|1C7I|A Chain A, Thermophylic Pnb Esterase
Length = 489
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 62/137 (45%), Gaps = 24/137 (17%)
Query: 46 SVDSNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTL 105
S+ ++ E+ L ++ P + P+ LP++V+I+GG F + P Y + L
Sbjct: 69 SLSYKELPRQSEDCLYVNVFAP---DTPSQNLPVMVWIHGGAFYLGAGSEPLYDG--SKL 123
Query: 106 VSEAKVIAVFVDHRRAP-----------EHPVPCAHEDSWAALKWVASHVDGQGPEDWLN 154
++ +VI V +++R P + D AALKWV ++ G
Sbjct: 124 AAQGEVIVVTLNYRLGPFGFMHLSSFDEAYSDNLGLLDQAAALKWVRENISAFG------ 177
Query: 155 HYADFERVFIYGDNAGG 171
D + V ++G++AGG
Sbjct: 178 --GDPDNVTVFGESAGG 192
>pdb|2BCE|A Chain A, Cholesterol Esterase From Bos Taurus
Length = 579
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 49 SNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTY-HNYV---NT 104
+ D Y E+ L +++P+ +H LP++++IYGG F + + + NY+
Sbjct: 70 TQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEE 129
Query: 105 LVSEAKVIAVFVDHRRAP-------EHPVPCAHE--DSWAALKWVASHVDGQGPEDWLNH 155
+ + VI V ++R P + +P + D A+ WV +++ G
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFG------- 182
Query: 156 YADFERVFIYGDNAGG 171
D +++ ++G++AGG
Sbjct: 183 -GDPDQITLFGESAGG 197
>pdb|1AQL|A Chain A, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
pdb|1AQL|B Chain B, Crystal Structure Of Bovine Bile-Salt Activated Lipase
Complexed With Taurocholate
Length = 532
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 21/136 (15%)
Query: 49 SNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTY-HNYV---NT 104
+ D Y E+ L +++P+ +H LP++++IYGG F + + + NY+
Sbjct: 70 TQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEE 129
Query: 105 LVSEAKVIAVFVDHRRAP---------EHPVPCAHEDSWAALKWVASHVDGQGPEDWLNH 155
+ + VI V ++R P P D A+ WV +++ G
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFG------- 182
Query: 156 YADFERVFIYGDNAGG 171
D + + ++G++AGG
Sbjct: 183 -GDPDNITLFGESAGG 197
>pdb|1AKN|A Chain A, Structure Of Bile-salt Activated Lipase
Length = 579
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 63/136 (46%), Gaps = 21/136 (15%)
Query: 49 SNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTY-HNYV---NT 104
+ D Y E+ L +++P+ +H LP++++IYGG F + + + NY+
Sbjct: 70 TQDSTYGNEDCLYLNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEE 129
Query: 105 LVSEAKVIAVFVDHRRAP-------EHPVPCAHE--DSWAALKWVASHVDGQGPEDWLNH 155
+ + VI V ++R P + +P + D A+ WV +++ G
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDSNLPGNYGLWDQHMAIAWVKRNIEAFG------- 182
Query: 156 YADFERVFIYGDNAGG 171
D + + ++G++AGG
Sbjct: 183 -GDPDNITLFGESAGG 197
>pdb|1F6W|A Chain A, Structure Of The Catalytic Domain Of Human Bile Salt
Activated Lipase
Length = 533
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 77/195 (39%), Gaps = 36/195 (18%)
Query: 49 SNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTY-HNYV---NT 104
+ D Y E+ L +++P+ + LP++++IYGG F + + +NY+
Sbjct: 70 TQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEE 129
Query: 105 LVSEAKVIAVFVDHRRAP---------EHPVPCAHEDSWAALKWVASHVDGQGPEDWLNH 155
+ + VI V ++R P P D A+ WV ++ G
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFG------- 182
Query: 156 YADFERVFIYGDNAGGNIAHHKVMR-----LPREILDGFNVV---GIVLAHTYFWGKE-- 205
D + + ++G++AGG + + L R + V ++ + FW K+
Sbjct: 183 -GDPDNITLFGESAGGASVSLQTLSPYNKGLIRRAISQSGVALSPWVIQKNPLFWAKKVA 241
Query: 206 -----PVGDETIDAE 215
PVGD A+
Sbjct: 242 EKVGCPVGDAARMAQ 256
>pdb|1THG|A Chain A, 1.8 Angstroms Refined Structure Of The Lipase From
Geotrichum Candidum
Length = 544
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 26/184 (14%)
Query: 13 AQDVSPMFKIYEDGRVERLVGN-----EIVPPSFDPKTSVDSNDVVYSPENNLSARLYIP 67
A D SP + G L+ +++P F + V E+ L ++ P
Sbjct: 54 ANDFSPACMQLDPGNSLTLLDKALGLAKVIPEEFRGPLYDMAKGTVSMNEDCLYLNVFRP 113
Query: 68 KNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAK-VIAVFVDHRRAP---- 122
T P+ KLP++V+IYGG F + ++YV ++ + V+ V +++R P
Sbjct: 114 AGTK-PDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGPFGFL 172
Query: 123 -------EHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAH 175
E D L+WV+ ++ N D ++V I+G++AG
Sbjct: 173 GGDAITAEGNTNAGLHDQRKGLEWVSDNI--------ANFGGDPDKVMIFGESAGAMSVA 224
Query: 176 HKVM 179
H+++
Sbjct: 225 HQLI 228
>pdb|1JMY|A Chain A, Truncated Recombinant Human Bile Salt Stimulated Lipase
Length = 522
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 76/195 (38%), Gaps = 36/195 (18%)
Query: 49 SNDVVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTY-HNYV---NT 104
+ D Y E+ L +++P+ + LP++++IYGG F + + +NY+
Sbjct: 70 TQDSTYGDEDCLYLNIWVPQGRKQVSRDLPVMIWIYGGAFLMGSGHGANFLNNYLYDGEE 129
Query: 105 LVSEAKVIAVFVDHRRAP---------EHPVPCAHEDSWAALKWVASHVDGQGPEDWLNH 155
+ + VI V ++R P P D A+ WV ++ G
Sbjct: 130 IATRGNVIVVTFNYRVGPLGFLSTGDANLPGNYGLRDQHMAIAWVKRNIAAFG------- 182
Query: 156 YADFERVFIYGDNAGGNIAHHKVMR-----LPREILDGFNVV---GIVLAHTYFWGKE-- 205
D + ++G++AGG + + L R + V ++ + FW K+
Sbjct: 183 -GDPNNITLFGESAGGASVSLQTLSPYNKGLIRRAISQSGVALSPWVIQKNPLFWAKKVA 241
Query: 206 -----PVGDETIDAE 215
PVGD A+
Sbjct: 242 EKVGCPVGDAARMAQ 256
>pdb|1DX4|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Phenylmethylamino)-1,2,3,4-Tetrahydroacridine
pdb|1QO9|A Chain A, Native Acetylcholinesterase From Drosophila Melanogaster
pdb|1QON|A Chain A, Ache From Drosophila Melanogaster Complex With Tacrine
Derivative
9-(3-Iodobenzylamino)-1,2,3,4-Tetrahydroacridine
Length = 585
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 33/131 (25%)
Query: 67 PKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHR------- 119
P+NT N LP++++IYGGGF A Y+ + + + VI +R
Sbjct: 134 PQNTTN---GLPILIWIYGGGFMTGSATLDIYN--ADIMAAVGNVIVASFQYRVGAFGFL 188
Query: 120 -RAPEHPVPCAHE--------DSWAALKWVA--SHVDGQGPEDWLNHYADFERVFIYGDN 168
APE P A E D A++W+ +H G PE W+ ++G++
Sbjct: 189 HLAPEMPSEFAEEAPGNVGLWDQALAIRWLKDNAHAFGGNPE-WMT---------LFGES 238
Query: 169 AGGNIAHHKVM 179
AG + + ++M
Sbjct: 239 AGSSSVNAQLM 249
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 22/124 (17%)
Query: 57 ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFV 116
E+ L +Y P + N +LP++V+I+GGG + A TY L + V+ V +
Sbjct: 91 EDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTI 145
Query: 117 DHR--------RAPEHPVP-CAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGD 167
+R EH H D AAL+WV ++ G + V I+G+
Sbjct: 146 QYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFG--------GNPGSVTIFGE 197
Query: 168 NAGG 171
+AGG
Sbjct: 198 SAGG 201
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 22/124 (17%)
Query: 57 ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFV 116
E+ L +Y P + N +LP++V+I+GGG + A TY L + V+ V +
Sbjct: 94 EDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTI 148
Query: 117 DHR--------RAPEHPVP-CAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGD 167
+R EH H D AAL+WV ++ G + V I+G+
Sbjct: 149 QYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFG--------GNPGSVTIFGE 200
Query: 168 NAGG 171
+AGG
Sbjct: 201 SAGG 204
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 22/124 (17%)
Query: 57 ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFV 116
E+ L +Y P + N +LP++V+I+GGG + A TY L + V+ V +
Sbjct: 96 EDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTI 150
Query: 117 DHR--------RAPEHPVP-CAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGD 167
+R EH H D AAL+WV ++ G + V I+G+
Sbjct: 151 QYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFG--------GNPGSVTIFGE 202
Query: 168 NAGG 171
+AGG
Sbjct: 203 SAGG 206
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 22/124 (17%)
Query: 57 ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFV 116
E+ L +Y P + N +LP++V+I+GGG + A TY L + V+ V +
Sbjct: 96 EDCLYLNIYTPADLTKKN-RLPVMVWIHGGGLMVGAA--STYDGL--ALAAHENVVVVTI 150
Query: 117 DHR--------RAPEHPVP-CAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGD 167
+R EH H D AAL+WV ++ G + V I+G+
Sbjct: 151 QYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIASFG--------GNPGSVTIFGE 202
Query: 168 NAGG 171
+AGG
Sbjct: 203 SAGG 206
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 54/125 (43%), Gaps = 22/125 (17%)
Query: 57 ENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFV 116
E+ L +Y P + +LP++V+I+GGG + A TY L + V+ V +
Sbjct: 92 EDCLYLNIYTPADLTK-RGRLPVMVWIHGGGLMVGGA--STYDGL--ALSAHENVVVVTI 146
Query: 117 DHR--------RAPEHPVP-CAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGD 167
+R EH H D AAL+WV ++ N D V I+G+
Sbjct: 147 QYRLGIWGFFSTGDEHSRGNWGHLDQVAALRWVQDNIA--------NFGGDPGSVTIFGE 198
Query: 168 NAGGN 172
+AGG
Sbjct: 199 SAGGQ 203
>pdb|3GA7|A Chain A, 1.55 Angstrom Crystal Structure Of An Acetyl Esterase From
Salmonella Typhimurium
Length = 326
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 7/94 (7%)
Query: 52 VVYSPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKV 111
V +P +++ RLY P+ T+ + Y++GGGF + T+ L
Sbjct: 67 AVPTPYGDVTTRLYSPQPTSQAT-----LYYLHGGGFIL--GNLDTHDRIXRLLARYTGC 119
Query: 112 IAVFVDHRRAPEHPVPCAHEDSWAALKWVASHVD 145
+ +D+ +P+ P A E++ A + + H D
Sbjct: 120 TVIGIDYSLSPQARYPQAIEETVAVCSYFSQHAD 153
>pdb|3DOH|A Chain A, Crystal Structure Of A Thermostable Esterase
pdb|3DOH|B Chain B, Crystal Structure Of A Thermostable Esterase
pdb|3DOI|A Chain A, Crystal Structure Of A Thermostable Esterase Complex With
Paraoxon
pdb|3DOI|B Chain B, Crystal Structure Of A Thermostable Esterase Complex With
Paraoxon
Length = 380
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 53/140 (37%), Gaps = 35/140 (25%)
Query: 63 RLYIPKNTNNPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAP 122
RL++PK+ N P+ K PLVV+++G G NY+ + V V+ R
Sbjct: 161 RLFVPKDVN-PDRKYPLVVFLHGAG-------ERGTDNYLQVAGNRGAV--VWAQPRYQV 210
Query: 123 EHPV-----PCAHEDSWAALKWVASHVDGQGP--------------EDWLNHY-ADFERV 162
HP C SW+ L D + P L+ Y D R+
Sbjct: 211 VHPCFVLAPQCPPNSSWSTL-----FTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRI 265
Query: 163 FIYGDNAGGNIAHHKVMRLP 182
+I G + GG +M P
Sbjct: 266 YITGLSMGGYGTWTAIMEFP 285
>pdb|1GZ7|A Chain A, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|B Chain B, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|C Chain C, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
pdb|1GZ7|D Chain D, Crystal Structure Of The Closed State Of Lipase 2 From
Candida Rugosa
Length = 534
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 20/106 (18%)
Query: 77 LPLVVYIYGGGFCI-YFAFHPTYHNYVNTLVSEAKVIAVFVDHRRAP-----------EH 124
LP++++I+GGGF + + P +++ VI V +++R A E
Sbjct: 114 LPVMLWIFGGGFELGGSSLFPGDQMVAKSVLMGKPVIHVSMNYRVASWGFLAGPDIQNEG 173
Query: 125 PVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
D A++WVA ++ G G D +V IYG++AG
Sbjct: 174 SGNAGLHDQRLAMQWVADNIAGFG--------GDPSKVTIYGESAG 211
>pdb|1CLE|A Chain A, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
pdb|1CLE|B Chain B, Structure Of Uncomplexed And Linoleate-Bound Candida
Cylindracea Cholesterol Esterase
Length = 534
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 20/106 (18%)
Query: 77 LPLVVYIYGGGFCIYF-AFHPTYHNYVNTLVSEAKVIAVFVDHRRA-----------PEH 124
LP++++I+GGGF I P +++ +I V V++R A E
Sbjct: 114 LPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG 173
Query: 125 PVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
+D ++WVA ++ G G D +V I+G++AG
Sbjct: 174 SGNAGLKDQRLGMQWVADNIAGFG--------GDPSKVTIFGESAG 211
>pdb|1LLF|A Chain A, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
pdb|1LLF|B Chain B, Cholesterol Esterase (Candida Cylindracea) Crystal
Structure At 1.4a Resolution
Length = 534
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 20/106 (18%)
Query: 77 LPLVVYIYGGGFCIYF-AFHPTYHNYVNTLVSEAKVIAVFVDHRRA-----------PEH 124
LP++++I+GGGF I P +++ +I V V++R A E
Sbjct: 114 LPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIKAEG 173
Query: 125 PVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
+D ++WVA ++ G G D +V I+G++AG
Sbjct: 174 SGNAGLKDQRLGMQWVADNIAGFG--------GDPSKVTIFGESAG 211
>pdb|3BE8|A Chain A, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|3BE8|B Chain B, Crystal Structure Of The Synaptic Protein Neuroligin 4
pdb|2WQZ|A Chain A, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2WQZ|B Chain B, Crystal Structure Of Synaptic Protein Neuroligin-4 In
Complex With Neurexin-beta 1: Alternative Refinement
pdb|2XB6|A Chain A, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
pdb|2XB6|B Chain B, Revisited Crystal Structure Of Neurexin1beta-neuroligin4
Complex
Length = 588
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 27/157 (17%)
Query: 29 ERLVGNEIVPPSFDPKTSVDSNDVVYSPENNLSARLYIPK--NTNNPNHKLPLVVYIYGG 86
ER + ++++P F V E+ L +Y+P + ++ N K P++VYI+GG
Sbjct: 85 ERSLLHDMLPIWFTANLDTLMTYVQDQNEDCLYLNIYVPTEDDIHDQNSKKPVMVYIHGG 144
Query: 87 GFCIYFAFHPTYHNYVN--TLVSEAKVIAVFVDHRRAPEHPVPCAHE---------DSWA 135
++ N ++ L S VI + +++R + + D
Sbjct: 145 ------SYMEGTGNMIDGSILASYGNVIVITINYRLGILGFLSTGDQAAKGNYGLLDQIQ 198
Query: 136 ALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGN 172
AL+W+ +V G D +RV I+G AG +
Sbjct: 199 ALRWIEENVGAFG--------GDPKRVTIFGSGAGAS 227
>pdb|1KU6|A Chain A, Fasciculin 2-Mouse Acetylcholinesterase Complex
Length = 549
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|1MAA|A Chain A, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|B Chain B, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|C Chain C, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
pdb|1MAA|D Chain D, Mouse Acetylcholinesterase Catalytic Domain, Glycosylated
Protein
Length = 547
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|2XUF|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUF|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Mth)
pdb|2XUG|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
pdb|2XUG|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (1
Wk)
Length = 544
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|2XUD|A Chain A, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUD|B Chain B, Crystal Structure Of The Y337a Mutant Of Mouse
Acetylcholinesterase
pdb|2XUH|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUH|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Anti Complex (10
Mth)
pdb|2XUI|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUI|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1 Wk)
pdb|2XUJ|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUJ|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (1
Mth)
pdb|2XUK|A Chain A, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUK|B Chain B, Crystal Structure Of Mache-Y337a-Tz2pa6 Syn Complex (10
Mth)
pdb|2XUO|A Chain A, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUO|B Chain B, Crystal Structure Of Mache-Y337a Mutant In Complex With
Soaked Tz2pa6 Anti Inhibitor
pdb|2XUP|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUP|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Syn Inhibitor
pdb|2XUQ|A Chain A, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
pdb|2XUQ|B Chain B, Crystal Structure Of The Mache-Y337a Mutant In Complex
With Soaked Tz2pa6 Anti-Syn Inhibitors
Length = 543
Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|2C0P|A Chain A, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0P|B Chain B, Aged Form Of Mouse Acetylcholinesterase Inhibited By Tabun
pdb|2C0Q|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2C0Q|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun
pdb|2JEY|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2JEY|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Hlo-7
pdb|2WHR|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|2WHR|B Chain B, Crystal Structure Of Acetylcholinesterase In Complex With
K027
pdb|4A23|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4A23|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Racemic
C5685
pdb|4ARA|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARA|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(r)-c5685 At 2.5 A Resolution.
pdb|4ARB|A Chain A, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution.
pdb|4ARB|B Chain B, Mus Musculus Acetylcholinesterase In Complex With
(s)-c5685 At 2.25 A Resolution
Length = 548
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|1MAH|A Chain A, Fasciculin2-Mouse Acetylcholinesterase Complex
pdb|1J06|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J06|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In The Apo
Form
pdb|1J07|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1J07|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Decidium Complex
pdb|1N5R|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|1N5R|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Propidium Complex
pdb|2H9Y|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2H9Y|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With M-(N,N, N-Trimethylammonio)trifluoroacetophenone
pdb|2HA0|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA0|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With 4- Ketoamyltrimethylammonium
pdb|2HA2|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA2|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Succinylcholine
pdb|2HA3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2HA3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Complexed
With Choline
pdb|2GYU|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYU|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Hi-6
pdb|2GYV|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYV|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Ortho-7
pdb|2GYW|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2GYW|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Obidoxime
pdb|2WLS|A Chain A, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|2WLS|B Chain B, Crystal Structure Of Mus Musculus Acetylcholinesterase In
Complex With Amts13
pdb|4BC0|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC0|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 12-h Soak): Cresyl-phosphoserine Adduct
pdb|4BC1|A Chain A, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|B Chain B, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|C Chain C, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
pdb|4BC1|D Chain D, Structure Of Mouse Acetylcholinesterase Inhibited By Cbdp
( 30-min Soak): Cresyl-saligenin-phosphoserine Adduct
Length = 543
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|4A16|A Chain A, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|B Chain B, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|C Chain C, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
pdb|4A16|D Chain D, Structure Of Mouse Acetylcholinesterase Complex With
Huprine Derivative
Length = 545
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 104 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 163
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 164 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 215
Query: 184 EIL 186
L
Sbjct: 216 RSL 218
>pdb|1C2B|A Chain A, Electrophorus Electricus Acetylcholinesterase
Length = 540
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 104 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 163
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 164 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 215
Query: 184 EIL 186
L
Sbjct: 216 RSL 218
>pdb|1N5M|A Chain A, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
pdb|1N5M|B Chain B, Crystal Structure Of The Mouse
Acetylcholinesterase-Gallamine Complex
Length = 541
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|1C2O|A Chain A, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|B Chain B, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|C Chain C, Electrophorus Electricus Acetylcholinesterase
pdb|1C2O|D Chain D, Electrophorus Electricus Acetylcholinesterase
Length = 539
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 103 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 162
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 163 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 214
Query: 184 EIL 186
L
Sbjct: 215 RSL 217
>pdb|1Q83|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q83|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Syn Complex
pdb|1Q84|A Chain A, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
pdb|1Q84|B Chain B, Crystal Structure Of The Mouse Acetylcholinesterase-Tz2pa6
Anti Complex
Length = 580
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 138 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 197
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G++AG ++ LP
Sbjct: 198 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGESAGAASVGMHILSLPS 249
Query: 184 EIL 186
L
Sbjct: 250 RSL 252
>pdb|2WHP|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
Length = 548
Score = 32.0 bits (71), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G+ AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGEXAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|2JGF|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGF|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Fenamiphos
pdb|2JGI|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGI|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Non-Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGK|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGK|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Fenamiphos
pdb|2JGL|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGL|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Vx And Sarin
pdb|2JGM|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JGM|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase Inhibited
By Aged Diisopropyl Fluorophosphate (Dfp)
pdb|2JEZ|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JEZ|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Hlo-7
pdb|2JF0|A Chain A, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|2JF0|B Chain B, Mus Musculus Acetylcholinesterase In Complex With Tabun
And Ortho-7
pdb|3DL4|A Chain A, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|3DL4|B Chain B, Non-Aged Form Of Mouse Acetylcholinesterase Inhibited By
Tabun- Update
pdb|2WHP|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin And In Complex With Hi-6
pdb|2WHQ|A Chain A, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WHQ|B Chain B, Crystal Structure Of Acetylcholinesterase, Phosphonylated
By Sarin (Aged) In Complex With Hi-6
pdb|2WU3|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU3|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Hi-6
pdb|2WU4|A Chain A, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2WU4|B Chain B, Crystal Structure Of Mouse Acetylcholinesterase In Complex
With Fenamiphos And Ortho-7
pdb|2Y2U|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2U|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Vx-Update
pdb|2Y2V|A Chain A, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
pdb|2Y2V|B Chain B, Nonaged Form Of Mouse Acetylcholinesterase Inhibited By
Sarin-Update
Length = 548
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G+ AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGEXAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|2HA4|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA4|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Acetylcholine
pdb|2HA5|A Chain A, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA5|B Chain B, Crystal Structure Of Mutant S203a Of Acetylcholinesterase
Complexed With Acetylthiocholine
pdb|2HA6|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA6|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Succinylcholine
pdb|2HA7|A Chain A, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
pdb|2HA7|B Chain B, Crystal Structure Of Mutant S203a Of Mouse
Acetylcholinesterase Complexed With Butyrylthiocholine
Length = 543
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 16/123 (13%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPE 123
P P++++IYGGGF A Y V A ++++ F+ + E
Sbjct: 107 RPASPTPVLIWIYGGGFYSGAASLDVYDGRFLAQVEGAVLVSMNYRVGTFGFLALPGSRE 166
Query: 124 HPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGNIAHHKVMRLPR 183
P D AL+WV ++ G D V ++G+ AG ++ LP
Sbjct: 167 APGNVGLLDQRLALQWVQENIAAFG--------GDPMSVTLFGEAAGAASVGMHILSLPS 218
Query: 184 EIL 186
L
Sbjct: 219 RSL 221
>pdb|1LPM|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
pdb|1LPN|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPO|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPP|A Chain A, Analogs Of Reaction Intermediates Identify A Unique
Substrate Binding Site In Candida Rugosa Lipase
pdb|1LPS|A Chain A, A Structural Basis For The Chiral Preferences Of Lipases
Length = 549
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 55 SPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCI-YFAFHPTYHNYVNTLVSEAKVIA 113
S E+ L+ + P T LP++++I+GGGF + + P ++ +I
Sbjct: 108 SSEDCLTINVVRPPGTK-AGANLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIH 166
Query: 114 VFVDHRRA-----------PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERV 162
V V++R + E +D ++WVA ++ G D +V
Sbjct: 167 VSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIAAFG--------GDPTKV 218
Query: 163 FIYGDNAG 170
I+G++AG
Sbjct: 219 TIFGESAG 226
>pdb|1CRL|A Chain A, Insights Into Interfacial Activation From An 'open'
Structure Of Candida Rugosa Lipase
pdb|1TRH|A Chain A, Two Conformational States Of Candida Rugosa Lipase
pdb|3RAR|A Chain A, X-Ray Structure Of A Bound Phosphonate Transition State
Analog And Enantioselectivity Of Candida Rugosa Lipase
Toward Chiral Carboxylic Acids
Length = 534
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 54/128 (42%), Gaps = 21/128 (16%)
Query: 55 SPENNLSARLYIPKNTNNPNHKLPLVVYIYGGGFCI-YFAFHPTYHNYVNTLVSEAKVIA 113
S E+ L+ + P T LP++++I+GGGF + + P ++ +I
Sbjct: 93 SSEDCLTINVVRPPGTK-AGANLPVMLWIFGGGFEVGGTSTFPPAQMITKSIAMGKPIIH 151
Query: 114 VFVDHRRA-----------PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERV 162
V V++R + E +D ++WVA ++ G D +V
Sbjct: 152 VSVNYRVSSWGFLAGDEIKAEGSANAGLKDQRLGMQWVADNIAAFG--------GDPTKV 203
Query: 163 FIYGDNAG 170
I+G++AG
Sbjct: 204 TIFGESAG 211
>pdb|3LII|A Chain A, Recombinant Human Acetylcholinesterase
pdb|3LII|B Chain B, Recombinant Human Acetylcholinesterase
Length = 540
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHR----------RA 121
P P++V+IYGGGF + Y LV + + V +++R +
Sbjct: 104 RPTSPTPVLVWIYGGGFYSGASSLDVYDG--RFLVQAERTVLVSMNYRVGAFGFLALPGS 161
Query: 122 PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
E P D AL+WV +V G D V ++G++AG
Sbjct: 162 REAPGNVGLLDQRLALQWVQENVAAFG--------GDPTSVTLFGESAG 202
>pdb|1B41|A Chain A, Human Acetylcholinesterase Complexed With Fasciculin-Ii,
Glycosylated Protein
Length = 539
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHR----------RA 121
P P++V+IYGGGF + Y LV + + V +++R +
Sbjct: 103 RPTSPTPVLVWIYGGGFYSGASSLDVYDG--RFLVQAERTVLVSMNYRVGAFGFLALPGS 160
Query: 122 PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
E P D AL+WV +V G D V ++G++AG
Sbjct: 161 REAPGNVGLLDQRLALQWVQENVAAFG--------GDPTSVTLFGESAG 201
>pdb|4EY4|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY4|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In The Apo State
pdb|4EY5|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY5|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Huperzine A
pdb|4EY6|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY6|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With (-)-Galantamine
pdb|4EY7|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY7|B Chain B, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Donepezil
pdb|4EY8|A Chain A, Crystal Structure Of Recombinant Human
Acetylcholinesterase In Complex With Fasciculin-2
Length = 542
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHR----------RA 121
P P++V+IYGGGF + Y LV + + V +++R +
Sbjct: 106 RPTSPTPVLVWIYGGGFYSGASSLDVYDG--RFLVQAERTVLVSMNYRVGAFGFLALPGS 163
Query: 122 PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
E P D AL+WV +V G D V ++G++AG
Sbjct: 164 REAPGNVGLLDQRLALQWVQENVAAFG--------GDPTSVTLFGESAG 204
>pdb|1SOM|A Chain A, Torpedo Californica Acetylcholinesterase Inhibited By
Nerve Agent Gd (Soman).
pdb|1DX6|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Galanthamine At 2.3a Resolution
pdb|1E3Q|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Bw284c51
pdb|1E66|A Chain A, Structure Of Acetylcholinesterase Complexed With
(-)-Huprine X At 2.1a Resolution
pdb|1HBJ|A Chain A, X-Ray Crystal Structure Of Complex Between Torpedo
Californica Ache And A Reversible Inhibitor, 4-Amino-5-
Fluo Ro-2-Methyl-3-(3-Trifluoroacetylbenzylthiomethyl)
Quinoline
pdb|1H22|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(10)-Hupyridone At 2.15a Resolution
pdb|1H23|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With (S,S)-(-)-Bis(12)-Hupyridone At 2.15a Resolution
pdb|1W4L|A Chain A, Complex Of Tcache With Bis-Acting Galanthamine Derivative
pdb|1W6R|A Chain A, Complex Of Tcache With Galanthamine Derivative
pdb|1W75|A Chain A, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W75|B Chain B, Native Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache)
pdb|1W76|A Chain A, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1W76|B Chain B, Orthorhombic Form Of Torpedo Californica
Acetylcholinesterase (Ache) Complexed With Bis-Acting
Galanthamine Derivative
pdb|1ODC|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-4'-Quinolyl-N'-9"-(1",2",3",4"
-Tetrahydroacridinyl)-1,8-Diaminooctane At 2.2a
Resolution
pdb|1U65|A Chain A, Ache W. Cpt-11
pdb|1ZGB|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(R)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|A Chain A, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|1ZGC|B Chain B, Crystal Structure Of Torpedo Californica
Acetylcholinesterase In Complex With An
(Rs)-Tacrine(10)-Hupyridone Inhibitor.
pdb|2BAG|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With Ganstigmine
pdb|2CKM|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (7 Carbon Linker)
pdb|2CMF|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With
Alkylene-Linked Bis-Tacrine Dimer (5 Carbon Linker)
pdb|2J4F|A Chain A, Torpedo Acetylcholinesterase - Hg Heavy-Atom Derivative
pdb|1EVE|A Chain A, Three Dimensional Structure Of The Anti-Alzheimer Drug,
E2020 (Aricept), Complexed With Its Target
Acetylcholinesterase
pdb|2J3Q|A Chain A, Torpedo Acetylcholinesterase Complexed With Fluorophore
Thioflavin T
pdb|2VQ6|A Chain A, Torpedo Californica Acetylcholinesterase Complexed With 2-
Pam
pdb|2J3D|A Chain A, Native Monoclinic Form Of Torpedo Acetylcholinesterase
pdb|3M3D|A Chain A, Crystal Structure Of Acetylcholinesterase In Complex With
Xenon
pdb|3ZV7|A Chain A, Torpedo Californica Acetylcholinesterase Inhibition By
Bisnorcymserine
Length = 543
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPEHPVPCAH 130
++V+IYGGGF + Y+ E ++++ F+ + E P
Sbjct: 111 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 171 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 203
>pdb|1UT6|A Chain A, Structure Of Acetylcholinesterase (E.C. 3.1.1.7) Complexed
With N-9-(1',2',3',4'-Tetrahydroacridinyl)-1,8-
Diaminooctane At 2.4 Angstroms Resolution.
pdb|1ACJ|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
pdb|1ACL|A Chain A, Quaternary Ligand Binding To Aromatic Residues In The
Active-Site Gorge Of Acetylcholinesterase
Length = 537
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 111 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 171 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 203
>pdb|1GQR|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Rivastigmine
pdb|1GQS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Nap
pdb|1JJB|A Chain A, A Neutral Molecule In Cation-Binding Site: Specific
Binding Of Peg-Sh To Acetylcholinesterase From Torpedo
Californica
Length = 532
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 108 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 167
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 168 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 200
>pdb|1FSS|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Fasciculin-Ii
pdb|1CFJ|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With O-Isopropylmethylphosphonofluoridate
(Gb, Sarin)
pdb|1VXO|A Chain A, Methylphosphonylated Acetylcholinesterase (Aged) Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1VXR|A Chain A, O-Ethylmethylphosphonylated Acetylcholinesterase Obtained
By Reaction With
O-Ethyl-S-[2-[bis(1-Methylethyl)amino]ethyl]
Methylphosphonothioate (Vx)
pdb|1QTI|A Chain A, Acetylcholinesterase (E.C.3.1.1.7)
pdb|1QID|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point A) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIE|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point B) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIF|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point C) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIG|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point D) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIH|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point E) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QII|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point F) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIJ|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point G) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIK|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point H) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1QIM|A Chain A, Specific Chemical And Structural Damage At Nine Time
Points (Point I) Caused By Intense Synchrotron Radiation
To Torpedo Californica Acetylcholinesterase
pdb|1EA5|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica At 1.8a Resolution
pdb|1GPK|A Chain A, Structure Of Acetylcholinesterase Complex With
(+)-Huperzine A At 2.1a Resolution
pdb|1GPN|A Chain A, Structure Of Acetylcholinesterase Complexed With Huperzine
B At 2.35a Resolution
pdb|2C4H|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
500mm Acetylthiocholine
pdb|2C5F|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium
pdb|2C5G|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Thiocholine
pdb|1AMN|A Chain A, Transition State Analog: Acetylcholinesterase Complexed
With M-(N,N,N-Trimethylammonio)trifluoroacetophenone
pdb|1AX9|A Chain A, Acetylcholinesterase Complexed With Edrophonium, Laue Data
pdb|1OCE|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With Mf268
pdb|1VOT|A Chain A, Acetylcholinesterase (E.C. 3.1.1.7) Complexed With
Huperzine A
pdb|2ACE|A Chain A, Native Acetylcholinesterase (E.C. 3.1.1.7) From Torpedo
Californica
pdb|2ACK|A Chain A, Acetylcholinesterase Complexed With Edrophonium,
Monochromatic Data
pdb|2V96|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V96|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With 1-(2-
Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine At 100k
pdb|2V97|A Chain A, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V97|B Chain B, Structure Of The Unphotolysed Complex Of Tcache With
1-(2- Nitrophenyl)-2,2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature
pdb|2V98|A Chain A, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2V98|B Chain B, Structure Of The Complex Of Tcache With
1-(2-Nitrophenyl)-2, 2,2-Trifluoroethyl-Arsenocholine
After A 9 Seconds Annealing To Room Temperature, During
The First 5 Seconds Of Which Laser Irradiation At 266nm
Took Place
pdb|2VA9|A Chain A, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VA9|B Chain B, Structure Of Native Tcache After A 9 Seconds Annealing To
Room Temperature During The First 5 Seconds Of Which
Laser Irradiation At 266nm Took Place
pdb|2VJA|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJA|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 100k
pdb|2VJB|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJB|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset D At 100k
pdb|2VJC|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJC|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-oxo-n,n,n-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset A At 150k
pdb|2VJD|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VJD|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With A
Non Hydrolysable Substrate Analogue, 4-Oxo-N,N,N-
Trimethylpentanaminium - Orthorhombic Space Group -
Dataset C At 150k
pdb|2VT6|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT6|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 9400000 Gy
pdb|2VT7|A Chain A, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2VT7|B Chain B, Native Torpedo Californica Acetylcholinesterase Collected
With A Cumulated Dose Of 800000 Gy
pdb|2WFZ|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman
pdb|2WG0|A Chain A, Aged Conjugate Of Torpedo Californica Acetylcholinesterase
With Soman (Obtained By In Crystallo Aging)
pdb|2WG1|A Chain A, Ternary Complex Of The Aged Conjugate Of Torpedo
Californica Aceylcholinesterase With Soman And 2-Pam
pdb|2WG2|A Chain A, Non-Aged Conjugate Of Torpedo Californica
Acetylcholinesterase With Soman (Alternative Refinement)
pdb|2XI4|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
pdb|2XI4|B Chain B, Torpedo Californica Acetylcholinesterase In Complex With
Aflatoxin B1 (Orthorhombic Space Group)
Length = 537
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPEHPVPCAH 130
++V+IYGGGF + Y+ E ++++ F+ + E P
Sbjct: 111 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 171 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 203
>pdb|2CEK|A Chain A, Conformational Flexibility In The Peripheral Site Of
Torpedo Californica Acetylcholinesterase Revealed By The
Complex Structure With A Bifunctional Inhibitor
Length = 535
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 111 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 171 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 203
>pdb|2W6C|X Chain X, Ache In Complex With A Bis-(-)-Nor-Meptazinol Derivative
pdb|2W9I|A Chain A, Ache In Complex With Methylene Blue
Length = 586
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 132 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 191
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 192 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 224
>pdb|1EEA|A Chain A, Acetylcholinesterase
Length = 534
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 111 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 171 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 203
>pdb|3I6M|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Piperidinopropyl-Galanthamine
pdb|3I6Z|A Chain A, 3d Structure Of Torpedo Californica Acetylcholinesterase
Complexed With N-Saccharinohexyl-Galanthamine
Length = 534
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 110 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 169
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G++AGG
Sbjct: 170 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGESAGG 202
>pdb|1F8U|A Chain A, Crystal Structure Of Mutant E202q Of Human
Acetylcholinesterase Complexed With Green Mamba Venom
Peptide Fasciculin-ii
Length = 583
Score = 28.9 bits (63), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 20/109 (18%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHR----------RA 121
P P++V+IYGGGF + Y LV + + V +++R +
Sbjct: 107 RPTSPTPVLVWIYGGGFYSGASSLDVYDG--RFLVQAERTVLVSMNYRVGAFGFLALPGS 164
Query: 122 PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
E P D AL+WV +V G D V ++G +AG
Sbjct: 165 REAPGNVGLLDQRLALQWVQENVAAFG--------GDPTSVTLFGQSAG 205
>pdb|2X8B|A Chain A, Crystal Structure Of Human Acetylcholinesterase Inhibited
By Aged Tabun And Complexed With Fasciculin-Ii
Length = 583
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 20/109 (18%)
Query: 72 NPNHKLPLVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAVFVDHR----------RA 121
P P++V+IYGGGF + Y LV + + V +++R +
Sbjct: 107 RPTSPTPVLVWIYGGGFYSGASSLDVYDG--RFLVQAERTVLVSMNYRVGAFGFLALPGS 164
Query: 122 PEHPVPCAHEDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAG 170
E P D AL+WV +V G D V ++G+ AG
Sbjct: 165 REAPGNVGLLDQRLALQWVQENVAAFG--------GDPTSVTLFGEXAG 205
>pdb|3GEL|A Chain A, O-Methylphosphorylated Torpedo Acetylcholinesterase
Obtained By Reaction With Methyl Paraoxon (Aged)
Length = 532
Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 108 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 167
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G+ AGG
Sbjct: 168 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGEXAGG 200
>pdb|2DFP|A Chain A, X-Ray Structure Of Aged Di-Isopropyl-Phosphoro-Fluoridate
(Dfp) Bound To Acetylcholinesterase
Length = 534
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFC-------IYFAFHPTYHNYVNTLVSEAKVIAV-FVDHRRAPEHPVPCAH 130
++V+IYGGGF +Y + Y V + +V A F+ + E P
Sbjct: 110 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 169
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G+ AGG
Sbjct: 170 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGEXAGG 202
>pdb|2C58|A Chain A, Torpedo Californica Acetylcholinesterase In Complex With
20mm Acetylthiocholine
Length = 537
Score = 28.5 bits (62), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 16/101 (15%)
Query: 79 LVVYIYGGGFCIYFAFHPTYHNYVNTLVSEAKVIAV--------FVDHRRAPEHPVPCAH 130
++V+IYGGGF + Y+ E ++++ F+ + E P
Sbjct: 111 VMVWIYGGGFYSGSSTLDVYNGKYLAYTEEVVLVSLSYRVGAFGFLALHGSQEAPGNVGL 170
Query: 131 EDSWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGG 171
D AL+WV ++ G D + V I+G+ AGG
Sbjct: 171 LDQRMALQWVHDNIQFFG--------GDPKTVTIFGEXAGG 203
>pdb|3BIW|A Chain A, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|B Chain B, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|C Chain C, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIW|D Chain D, Crystal Structure Of The Neuroligin-1NEUREXIN-1beta
Synaptic Adhesion Complex
pdb|3BIX|A Chain A, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|B Chain B, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|C Chain C, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
pdb|3BIX|D Chain D, Crystal Structure Of The Extracellular Esterase Domain Of
Neuroligin-1
Length = 574
Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 29/160 (18%)
Query: 25 DGRVERLVGNEIVPPSFDPKTSVDSNDVVYSPENNLSARLYIPK--NTNNPNHKLPLVVY 82
DGR+ + ++P F V S+ V E+ L +Y+P + + P++VY
Sbjct: 81 DGRLPEV----MLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVY 136
Query: 83 IYGGGFCIYFAFHPTYHNYVNT-LVSEAKVIAVFVDHRRAPEHPVPCAHE---------D 132
I+GG + T + Y + L S VI + V++R + + D
Sbjct: 137 IHGGSY-----MEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLD 191
Query: 133 SWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGN 172
AL+W + ++ G D R+ ++G AGG+
Sbjct: 192 LIQALRWTSENIGFFG--------GDPLRITVFGSGAGGS 223
>pdb|3B3Q|A Chain A, Crystal Structure Of A Synaptic Adhesion Complex
pdb|3B3Q|B Chain B, Crystal Structure Of A Synaptic Adhesion Complex
Length = 577
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 66/160 (41%), Gaps = 29/160 (18%)
Query: 25 DGRVERLVGNEIVPPSFDPKTSVDSNDVVYSPENNLSARLYIPK--NTNNPNHKLPLVVY 82
DGR+ + ++P F V S+ V E+ L +Y+P + + P++VY
Sbjct: 94 DGRLPEV----MLPVWFTNNLDVVSSYVQDQSEDCLYLNIYVPTEDDIRDSGGPKPVMVY 149
Query: 83 IYGGGFCIYFAFHPTYHNYVNT-LVSEAKVIAVFVDHRRAPEHPVPCAHE---------D 132
I+GG + T + Y + L S VI + V++R + + D
Sbjct: 150 IHGGSY-----MEGTGNLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAKGNYGLLD 204
Query: 133 SWAALKWVASHVDGQGPEDWLNHYADFERVFIYGDNAGGN 172
AL+W + ++ G D R+ ++G AGG+
Sbjct: 205 LIQALRWTSENIGFFG--------GDPLRITVFGSGAGGS 236
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,420,698
Number of Sequences: 62578
Number of extensions: 471436
Number of successful extensions: 992
Number of sequences better than 100.0: 79
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 932
Number of HSP's gapped (non-prelim): 83
length of query: 300
length of database: 14,973,337
effective HSP length: 98
effective length of query: 202
effective length of database: 8,840,693
effective search space: 1785819986
effective search space used: 1785819986
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)