Query         047392
Match_columns 258
No_of_seqs    196 out of 2095
Neff          9.6 
Searched_HMMs 13730
Date          Mon Mar 25 18:45:24 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047392.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047392hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1w3ba_ a.118.8.1 (A:) O-GlcNA  98.4 1.2E-05 8.9E-10   65.4  18.9  136  111-256   252-388 (388)
  2 d1w3ba_ a.118.8.1 (A:) O-GlcNA  98.3 1.5E-05 1.1E-09   64.8  16.9  136  112-257   219-355 (388)
  3 d2onda1 a.118.8.7 (A:242-549)   98.1 8.7E-05 6.4E-09   59.7  16.3  143  109-257   112-257 (308)
  4 d1fcha_ a.118.8.1 (A:) Peroxin  98.0 0.00038 2.8E-08   55.6  19.2  117  112-232   152-268 (323)
  5 d1elwa_ a.118.8.1 (A:) Hop {Hu  98.0 0.00012 8.6E-09   50.2  13.7  100  139-246    10-109 (117)
  6 d2onda1 a.118.8.7 (A:242-549)   98.0 0.00019 1.3E-08   57.7  16.3  119  110-233   148-270 (308)
  7 d1fcha_ a.118.8.1 (A:) Peroxin  98.0 0.00046 3.3E-08   55.1  18.6  140  110-256    67-255 (323)
  8 d1hh8a_ a.118.8.1 (A:) Neutrop  97.9 0.00053 3.9E-08   51.2  16.7  134  110-253    19-167 (192)
  9 d1a17a_ a.118.8.1 (A:) Protein  97.9  0.0002 1.5E-08   51.6  13.5   92  139-234    17-108 (159)
 10 d2c2la1 a.118.8.1 (A:24-224) S  97.9 0.00029 2.1E-08   52.3  14.3   98  130-232     2-100 (201)
 11 d1nzna_ a.118.8.1 (A:) Mitocho  97.8 0.00014   1E-08   50.4  10.1  107  136-249     3-113 (122)
 12 d1xnfa_ a.118.8.1 (A:) Lipopro  97.6  0.0027   2E-07   48.5  17.1  119  112-234    15-135 (259)
 13 d2h6fa1 a.118.6.1 (A:55-369) P  97.6  0.0015 1.1E-07   52.5  15.3  116  113-234    60-176 (315)
 14 d1hxia_ a.118.8.1 (A:) Peroxin  97.5 0.00051 3.7E-08   46.5  10.5   90  138-231    22-111 (112)
 15 d1p5qa1 a.118.8.1 (A:258-427)   97.3  0.0065 4.7E-07   43.9  14.9   97  137-234    18-126 (170)
 16 d2ff4a2 a.118.8.3 (A:105-283)   97.3  0.0035 2.6E-07   46.0  13.3  101  140-243    19-143 (179)
 17 d2fbna1 a.118.8.1 (A:22-174) P  97.2   0.012 8.7E-07   41.6  15.3  101  138-243    23-136 (153)
 18 d2h6fa1 a.118.6.1 (A:55-369) P  97.2  0.0055   4E-07   49.0  14.6  130  112-251    94-230 (315)
 19 d1a17a_ a.118.8.1 (A:) Protein  97.2  0.0074 5.4E-07   42.9  13.6  110  110-226    24-136 (159)
 20 d2ff4a2 a.118.8.3 (A:105-283)   97.1  0.0019 1.4E-07   47.5   9.8   72  132-206    67-143 (179)
 21 d1elra_ a.118.8.1 (A:) Hop {Hu  97.1  0.0085 6.2E-07   41.1  12.7   97  135-234     7-109 (128)
 22 d1elwa_ a.118.8.1 (A:) Hop {Hu  97.1   0.011 8.1E-07   39.7  13.0   91  110-207    17-107 (117)
 23 d1xnfa_ a.118.8.1 (A:) Lipopro  96.8   0.016 1.2E-06   44.0  13.7  119  109-233    50-168 (259)
 24 d2c2la1 a.118.8.1 (A:24-224) S  96.7  0.0094 6.8E-07   43.5  11.0   85  168-257     3-88  (201)
 25 d1kt1a1 a.118.8.1 (A:254-421)   96.6   0.016 1.2E-06   41.5  11.5   97  136-233    19-127 (168)
 26 d1hxia_ a.118.8.1 (A:) Peroxin  96.6  0.0088 6.4E-07   39.9   9.3   80  111-195    31-110 (112)
 27 d1hh8a_ a.118.8.1 (A:) Neutrop  96.6   0.011 7.8E-07   43.7  10.6   85  141-232    14-98  (192)
 28 d1ihga1 a.118.8.1 (A:197-365)   96.6   0.032 2.3E-06   39.8  12.9   97  136-234    31-141 (169)
 29 d1qqea_ a.118.8.1 (A:) Vesicul  96.3   0.016 1.2E-06   45.3  10.6  129  106-234    47-188 (290)
 30 d1p5qa1 a.118.8.1 (A:258-427)   96.2    0.11 8.3E-06   36.9  15.3   85  111-198    28-125 (170)
 31 d1zbpa1 e.61.1.1 (A:2-265) Hyp  96.1  0.0088 6.4E-07   46.7   8.0  111  111-233    11-128 (264)
 32 d1qqea_ a.118.8.1 (A:) Vesicul  96.0    0.17 1.2E-05   39.2  15.3  143  109-252    90-249 (290)
 33 d2hr2a1 a.118.8.8 (A:2-157) Hy  96.0    0.12 9.1E-06   36.0  13.1  100  133-232     8-128 (156)
 34 d1nzna_ a.118.8.1 (A:) Mitocho  95.9   0.055   4E-06   36.6  10.3   91  112-208    15-109 (122)
 35 d2fbna1 a.118.8.1 (A:22-174) P  95.6     0.2 1.4E-05   34.9  13.6   69  133-206    68-136 (153)
 36 d1hz4a_ a.118.8.2 (A:) Transcr  95.2    0.26 1.9E-05   37.9  13.6  120  111-233    27-162 (366)
 37 d1kt1a1 a.118.8.1 (A:254-421)   95.1    0.34 2.4E-05   34.1  15.2   93  134-231    66-160 (168)
 38 d1elra_ a.118.8.1 (A:) Hop {Hu  95.0   0.017 1.3E-06   39.4   5.0   55  177-232    12-66  (128)
 39 d1dcea1 a.118.6.1 (A:1-241,A:3  94.8    0.65 4.7E-05   36.2  17.0  136  113-258    46-195 (334)
 40 d1zbpa1 e.61.1.1 (A:2-265) Hyp  94.2   0.028   2E-06   43.7   5.1   59  142-205     6-64  (264)
 41 d1ihga1 a.118.8.1 (A:197-365)   94.0     0.4 2.9E-05   33.6  11.0   76  132-212    77-153 (169)
 42 d1zu2a1 a.118.8.1 (A:1-145) Mi  93.9    0.12 8.7E-06   35.8   7.7  113  109-234    10-143 (145)
 43 d1hz4a_ a.118.8.2 (A:) Transcr  93.8    0.21 1.6E-05   38.4  10.0  124  134-257   215-350 (366)
 44 d1tjca_ a.118.8.1 (A:) Prolyl   93.5    0.37 2.7E-05   30.4   9.1   60  138-197    11-74  (95)
 45 d1zu2a1 a.118.8.1 (A:1-145) Mi  93.3    0.63 4.6E-05   31.9  10.7   96  149-252    14-130 (145)
 46 d2hr2a1 a.118.8.8 (A:2-157) Hy  93.3    0.36 2.6E-05   33.4   9.5   86  112-197    25-128 (156)
 47 d1tjca_ a.118.8.1 (A:) Prolyl   92.4     0.7 5.1E-05   29.0   9.2   64  174-241    10-79  (95)
 48 d1b89a_ a.118.1.3 (A:) Clathri  91.5     2.6 0.00019   33.3  14.5  115  114-254    32-146 (336)
 49 d1v54e_ a.118.11.1 (E:) Cytoch  90.8       1 7.4E-05   28.8   8.2   46  187-232    24-69  (105)
 50 d1ya0a1 a.118.8.1 (A:1-497) SM  90.1    0.72 5.3E-05   38.5   9.4  115  132-255   120-234 (497)
 51 d1dcea1 a.118.6.1 (A:1-241,A:3  89.6     1.8 0.00013   33.4  11.0  109  109-223    86-197 (334)
 52 d1wy6a1 a.118.20.1 (A:7-167) H  88.8     1.7 0.00012   29.4   8.4   64  171-235    88-151 (161)
 53 d2pqrb1 a.118.8.1 (B:5-128) Mi  86.8     2.3 0.00017   28.4   8.2   48  184-232    53-101 (124)
 54 d1v54e_ a.118.11.1 (E:) Cytoch  80.5       3 0.00022   26.5   6.2   44  151-196    25-68  (105)
 55 d1b89a_ a.118.1.3 (A:) Clathri  80.2      10 0.00073   29.7  11.0  103  130-256    12-114 (336)
 56 d1klxa_ a.118.18.1 (A:) Cystei  77.7     7.1 0.00052   25.5  14.7  111  111-235     8-126 (133)
 57 d1ya0a1 a.118.8.1 (A:1-497) SM  72.4      14   0.001   30.1  10.5   79  134-216   154-232 (497)
 58 d1khda1 a.46.2.1 (A:12-80) Ant  71.8     6.9 0.00051   22.6   7.0   16  184-199    50-65  (69)
 59 d2nsza1 a.118.1.14 (A:322-450)  70.6     9.1 0.00066   25.3   7.2   65  135-202    10-76  (129)
 60 d2nsza1 a.118.1.14 (A:322-450)  69.0      12 0.00087   24.7   7.5   25  172-196    10-34  (129)
 61 d1u9pa1 a.43.1.1 (A:72-107) Ar  67.1     3.7 0.00027   19.8   3.1   32  116-147     4-35  (36)
 62 d1khda1 a.46.2.1 (A:12-80) Ant  64.7      10 0.00074   21.8   7.3   64  171-235     1-66  (69)
 63 d2f6ma1 a.2.17.1 (A:322-385) V  61.2     8.6 0.00063   22.1   4.6   48  171-219     3-50  (64)
 64 d1mzba_ a.4.5.42 (A:) Ferric u  60.3      18  0.0013   23.7   7.1   34  173-206    19-53  (134)
 65 d1wy6a1 a.118.20.1 (A:7-167) H  57.6      23  0.0017   23.6  14.5   62  136-200    90-151 (161)
 66 d2f6ma1 a.2.17.1 (A:322-385) V  54.7     9.4 0.00068   21.9   4.0   44  135-181     4-47  (64)
 67 d1ouva_ a.118.18.1 (A:) Cystei  46.6      45  0.0033   23.7  14.6  127  110-253    16-154 (265)
 68 d1wgla_ a.5.2.4 (A:) Toll-inte  46.3      21  0.0016   19.9   5.0   50  146-202     7-56  (59)
 69 d1sxjd1 a.80.1.1 (D:263-353) R  42.2      31  0.0023   20.6   6.0   38  144-184    14-51  (91)
 70 d1ouva_ a.118.18.1 (A:) Cystei  42.0      53  0.0039   23.2  14.6  110  113-234   127-248 (265)
 71 d1mzba_ a.4.5.42 (A:) Ferric u  40.8      39  0.0028   21.9   6.3   60  194-256     6-66  (134)
 72 d1h6pa_ a.146.1.1 (A:) TRF2 {H  40.2      29  0.0021   24.6   5.5   50  148-197    87-141 (203)
 73 d1sxjd1 a.80.1.1 (D:263-353) R  36.3      40  0.0029   20.1   6.1   49  172-222     6-54  (91)
 74 d1ug3a1 a.118.1.14 (A:1235-142  34.5      12 0.00085   26.6   2.7   63  134-200    12-76  (193)
 75 d2pqrb1 a.118.8.1 (B:5-128) Mi  32.1      60  0.0044   20.9   9.9   71  130-205    33-107 (124)
 76 d1klxa_ a.118.18.1 (A:) Cystei  31.2      58  0.0042   20.5  12.2   81  111-200    38-126 (133)
 77 d1h6pa_ a.146.1.1 (A:) TRF2 {H  29.3      73  0.0053   22.4   6.2   49  112-161    87-142 (203)
 78 d1fpwa_ a.39.1.5 (A:) Frequeni  29.2      78  0.0057   21.4   6.9  113  115-230    65-189 (190)
 79 d1brwa1 a.46.2.1 (A:1-70) Pyri  28.8      47  0.0034   18.7   7.0   50  149-201    19-68  (70)
 80 d1us7b_ a.205.1.1 (B:) Hsp90 c  28.4     3.4 0.00024   29.9  -1.3   23  219-242   178-200 (201)
 81 d1fkma2 a.69.2.1 (A:443-630) Y  27.9      25  0.0018   24.5   3.5   45  153-199    22-66  (188)
 82 d1k1aa_ d.211.1.1 (A:) bcl-3 {  26.3      24  0.0017   23.9   3.3   86  138-228     6-94  (228)
 83 d1ddfa_ a.77.1.2 (A:) Fas {Hum  26.2      48  0.0035   21.4   4.6   47  146-196    53-99  (127)
 84 d1k1aa_ d.211.1.1 (A:) bcl-3 {  25.7      22  0.0016   24.0   3.0   76  112-193    16-94  (228)
 85 d1peqa1 a.98.1.1 (A:13-174) R1  24.4      37  0.0027   23.1   3.8   27  180-206   125-151 (162)
 86 d1oaia_ a.5.2.3 (A:) FG-bindin  24.0      33  0.0024   19.1   2.8   19  182-200    33-51  (59)
 87 d2fnaa1 a.4.5.11 (A:284-356) H  23.9      65  0.0048   18.7   5.2   47  172-220     8-54  (73)
 88 d1ddfa_ a.77.1.2 (A:) Fas {Hum  23.2      49  0.0036   21.3   4.2   45  114-161    57-101 (127)
 89 d1peqa1 a.98.1.1 (A:13-174) R1  20.0      47  0.0034   22.6   3.6   38  205-244   115-152 (162)

No 1  
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.44  E-value=1.2e-05  Score=65.42  Aligned_cols=136  Identities=13%  Similarity=0.088  Sum_probs=95.6

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHH
Q 047392          111 GINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALA  190 (258)
Q Consensus       111 ~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~  190 (258)
                      ..++|++.|++..+.  -+-+..+|..+...+.+.|+.++|.+.++...... +.  +...+..+...+.+.|++++|++
T Consensus       252 ~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~--~~~~~~~l~~~~~~~~~~~~A~~  326 (388)
T d1w3ba_         252 LIDLAIDTYRRAIEL--QPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLC-PT--HADSLNNLANIKREQGNIEEAVR  326 (388)
T ss_dssp             CHHHHHHHHHHHHHT--CSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHC-TT--CHHHHHHHHHHHHTTTCHHHHHH
T ss_pred             CHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHhhhccC-Cc--cchhhhHHHHHHHHCCCHHHHHH
Confidence            366777777776532  12345667777777888888888888887776653 22  55677788888888888888888


Q ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCC-HHHHHHHHHHHHHcCC
Q 047392          191 TFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPD-VYTYTILISSYCKYGM  256 (258)
Q Consensus       191 l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd-~~ty~~li~~~~~~g~  256 (258)
                      .|++..+.. +-+..+|..+-..+.+.|++++|.+.|++..+..    |+ ...|..|-..|-+.||
T Consensus       327 ~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~l~----P~~~~a~~~lg~~~~~~~D  388 (388)
T d1w3ba_         327 LYRKALEVF-PEFAAAHSNLASVLQQQGKLQEALMHYKEAIRIS----PTFADAYSNMGNTLKEMQD  388 (388)
T ss_dssp             HHHHHTTSC-TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTC----TTCHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHcCC
Confidence            888876532 2245667777778888888888888888877633    64 5567777777777664


No 2  
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.33  E-value=1.5e-05  Score=64.78  Aligned_cols=136  Identities=17%  Similarity=0.129  Sum_probs=103.6

Q ss_pred             HHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHH
Q 047392          112 INKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALAT  191 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l  191 (258)
                      .++|++.|+.....  ...+...+..+-..+.+.|++++|.+.|++..+..  | -+..+|..+-..|.+.|++++|.+.
T Consensus       219 ~~~A~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--p-~~~~~~~~l~~~~~~~~~~~~A~~~  293 (388)
T d1w3ba_         219 FDRAVAAYLRALSL--SPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQ--P-HFPDAYCNLANALKEKGSVAEAEDC  293 (388)
T ss_dssp             TTHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC--S-SCHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred             HHHHHHHHHHhHHH--hhhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--C-CCHHHHHHHHHHHHHcCCHHHHHHH
Confidence            45778888777643  23456667777788888888888888888887753  2 1455788888888999999999998


Q ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCC-HHHHHHHHHHHHHcCCC
Q 047392          192 FYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPD-VYTYTILISSYCKYGMQ  257 (258)
Q Consensus       192 ~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd-~~ty~~li~~~~~~g~~  257 (258)
                      ++..... .+.+...+..+...+.+.|++++|.+.|++..+..    |+ ..+|..+-..|.+.|++
T Consensus       294 ~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~----p~~~~~~~~la~~~~~~g~~  355 (388)
T d1w3ba_         294 YNTALRL-CPTHADSLNNLANIKREQGNIEEAVRLYRKALEVF----PEFAAAHSNLASVLQQQGKL  355 (388)
T ss_dssp             HHHHHHH-CTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHTTSC----TTCHHHHHHHHHHHHTTTCC
T ss_pred             HHhhhcc-CCccchhhhHHHHHHHHCCCHHHHHHHHHHHHHhC----CCCHHHHHHHHHHHHHcCCH
Confidence            8887654 24567788888888899999999999999987643    54 55677777888888875


No 3  
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.09  E-value=8.7e-05  Score=59.71  Aligned_cols=143  Identities=12%  Similarity=0.045  Sum_probs=104.7

Q ss_pred             ccCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHH-HHhcCChHH
Q 047392          109 TLGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKV-LGEEGLVNE  187 (258)
Q Consensus       109 ~~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~-~~~~g~~~~  187 (258)
                      ....+.|..+|+.+... ........|...+..+.+.|+++.|.++|++..+.+. .  +...|-..... +...|+.+.
T Consensus       112 ~~~~~~a~~i~~~~l~~-~~~~~~~~w~~~~~~~~~~~~~~~ar~i~~~al~~~~-~--~~~~~~~~a~~e~~~~~~~~~  187 (308)
T d2onda1         112 RMKYEKVHSIYNRLLAI-EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDAR-T--RHHVYVTAALMEYYCSKDKSV  187 (308)
T ss_dssp             TTCHHHHHHHHHHHHTS-SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTT-C--CTHHHHHHHHHHHHTSCCHHH
T ss_pred             cccHHHHHHHHHHHHHH-hcCChHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-C--cHHHHHHHHHHHHHhccCHHH
Confidence            35589999999998732 2222355789999999999999999999999887642 2  22233333332 345689999


Q ss_pred             HHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCC--HHHHHHHHHHHHHcCCC
Q 047392          188 ALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPD--VYTYTILISSYCKYGMQ  257 (258)
Q Consensus       188 a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd--~~ty~~li~~~~~~g~~  257 (258)
                      |..+|+.+.+. ++-+...|...+..+.+.|+.+.|+.+|++-..... ..|+  ...|...+.--.+.|++
T Consensus       188 a~~i~e~~l~~-~p~~~~~w~~y~~~~~~~g~~~~aR~~fe~ai~~~~-~~~~~~~~iw~~~~~fE~~~G~~  257 (308)
T d2onda1         188 AFKIFELGLKK-YGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGS-LPPEKSGEIWARFLAFESNIGDL  257 (308)
T ss_dssp             HHHHHHHHHHH-HTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSS-SCGGGCHHHHHHHHHHHHHHSCH
T ss_pred             HHHHHHHHHHh-hhhhHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHcCCH
Confidence            99999999875 345678899999999999999999999999876542 1243  45788888776677764


No 4  
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.04  E-value=0.00038  Score=55.57  Aligned_cols=117  Identities=11%  Similarity=-0.001  Sum_probs=95.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHH
Q 047392          112 INKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALAT  191 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l  191 (258)
                      ..+|.+.|.+......-..+...+..+-..+.+.|++++|...|++.....  | -+...|..+-.+|.+.|++++|.+.
T Consensus       152 ~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~--p-~~~~~~~~lg~~~~~~g~~~~A~~~  228 (323)
T d1fcha_         152 FLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR--P-NDYLLWNKLGATLANGNQSEEAVAA  228 (323)
T ss_dssp             HHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccccc--c-ccccchhhhhhcccccccchhHHHH
Confidence            567888887766443334567788888899999999999999999988764  2 1566899999999999999999999


Q ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHh
Q 047392          192 FYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMEL  232 (258)
Q Consensus       192 ~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~  232 (258)
                      |++..+.. +-+...|..+-..|.+.|++++|.+.|++-..
T Consensus       229 ~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~  268 (323)
T d1fcha_         229 YRRALELQ-PGYIRSRYNLGISCINLGAHREAVEHFLEALN  268 (323)
T ss_dssp             HHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHh-hccHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence            99987642 23567788899999999999999999998765


No 5  
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02  E-value=0.00012  Score=50.23  Aligned_cols=100  Identities=11%  Similarity=-0.015  Sum_probs=83.7

Q ss_pred             HHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcC
Q 047392          139 GIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVG  218 (258)
Q Consensus       139 i~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g  218 (258)
                      -+.+.+.|++++|...|++..+.. +  -+...|+.+-.+|.+.|++++|++.+.+..+.+ +.+...|..+-.++...|
T Consensus        10 g~~~~~~g~~~eAi~~~~~al~~~-p--~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~g~~~~~~~   85 (117)
T d1elwa_          10 GNKALSVGNIDDALQCYSEAIKLD-P--HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKAAALEFLN   85 (117)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHC-T--TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCHHHHHHHHHHHHhcC-C--cchhhhhcccccccccccccccchhhhhHHHhc-cchhhHHHHHHHHHHHcc
Confidence            355778899999999999998874 2  266689999999999999999999999998754 468888999999999999


Q ss_pred             CHHHHHHHHHHhHhCCCCCCCCHHHHHH
Q 047392          219 NFNKARFLLEQMELPGFRCPPDVYTYTI  246 (258)
Q Consensus       219 ~~~~a~~~f~~M~~~~~~~~pd~~ty~~  246 (258)
                      ++++|...|++-....    |+-..+..
T Consensus        86 ~~~~A~~~~~~a~~~~----p~~~~~~~  109 (117)
T d1elwa_          86 RFEEAKRTYEEGLKHE----ANNPQLKE  109 (117)
T ss_dssp             CHHHHHHHHHHHHTTC----TTCHHHHH
T ss_pred             CHHHHHHHHHHHHHhC----CCCHHHHH
Confidence            9999999999999744    76554433


No 6  
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.98  E-value=0.00019  Score=57.70  Aligned_cols=119  Identities=9%  Similarity=0.065  Sum_probs=87.2

Q ss_pred             cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHH-HHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHH
Q 047392          110 LGINKATEFYHWVERFFHFFHNEVTCKEMGI-VFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEA  188 (258)
Q Consensus       110 ~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~-~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a  188 (258)
                      .+.+.|.++|+........  +...|-.... -+...|+.+.|..+|+.+.+. .+-  +...|...++.+.+.|++++|
T Consensus       148 ~~~~~ar~i~~~al~~~~~--~~~~~~~~a~~e~~~~~~~~~a~~i~e~~l~~-~p~--~~~~w~~y~~~~~~~g~~~~a  222 (308)
T d2onda1         148 EGIKSGRMIFKKAREDART--RHHVYVTAALMEYYCSKDKSVAFKIFELGLKK-YGD--IPEYVLAYIDYLSHLNEDNNT  222 (308)
T ss_dssp             HCHHHHHHHHHHHHTSTTC--CTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH-HTT--CHHHHHHHHHHHHTTCCHHHH
T ss_pred             CChHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHhccCHHHHHHHHHHHHHh-hhh--hHHHHHHHHHHHHHcCChHHH
Confidence            4578899999888743222  2333333222 234468899999999998886 222  566799999999999999999


Q ss_pred             HHHHHHHHhC-CCCCC--HHHHHHHHHHHHHcCCHHHHHHHHHHhHhC
Q 047392          189 LATFYRMKQF-RCRPD--VYAYNVVINALCRVGNFNKARFLLEQMELP  233 (258)
Q Consensus       189 ~~l~~~M~~~-g~~p~--~~ty~~li~~~~~~g~~~~a~~~f~~M~~~  233 (258)
                      ..+|++-... +..|+  ...|...+.---+.|+.+.+..++++|.+.
T Consensus       223 R~~fe~ai~~~~~~~~~~~~iw~~~~~fE~~~G~~~~~~~~~~r~~~~  270 (308)
T d2onda1         223 RVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRRFTA  270 (308)
T ss_dssp             HHHHHHHHHSSSSCGGGCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence            9999997664 34443  457888888878889999999999998773


No 7  
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.98  E-value=0.00046  Score=55.07  Aligned_cols=140  Identities=13%  Similarity=0.050  Sum_probs=75.5

Q ss_pred             cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCC-------------------------
Q 047392          110 LGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNG-------------------------  164 (258)
Q Consensus       110 ~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~-------------------------  164 (258)
                      ..+++|++.|.+..+..  +-+...|..+...+...|++++|.+.+++.......                         
T Consensus        67 ~~~~~A~~~~~~al~~~--p~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (323)
T d1fcha_          67 EQELLAISALRRCLELK--PDNQTALMALAVSFTNESLQRQACEILRDWLRYTPAYAHLVTPAEEGAGGAGLGPSKRILG  144 (323)
T ss_dssp             TCHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTGGGCC---------------CTTH
T ss_pred             CChHHHHHHHHhhhccc--cccccccccccccccccccccccccchhhHHHhccchHHHHHhhhhhhhhcccccchhhHH
Confidence            44666666666554321  123445555566666666666666666665554200                         


Q ss_pred             ----------------------C-CcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHH
Q 047392          165 ----------------------E-LVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFN  221 (258)
Q Consensus       165 ----------------------~-~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~  221 (258)
                                            | ..+..++..+-..+...|++++|...|++..... +-+...|..+-..+.+.|+++
T Consensus       145 ~~~~~~~~~~a~~~~~~al~~~p~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~  223 (323)
T d1fcha_         145 SLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR-PNDYLLWNKLGATLANGNQSE  223 (323)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHhhHHHHHHHHHHHHHHHhhcccccccchhhHHHHHHHHHHhhhhcccccccccc-cccccchhhhhhcccccccch
Confidence                                  0 0123344455555666666666666666655432 223455566666666666666


Q ss_pred             HHHHHHHHhHhCCCCCCCC-HHHHHHHHHHHHHcCC
Q 047392          222 KARFLLEQMELPGFRCPPD-VYTYTILISSYCKYGM  256 (258)
Q Consensus       222 ~a~~~f~~M~~~~~~~~pd-~~ty~~li~~~~~~g~  256 (258)
                      +|.+.|++..+..    |+ ...|..+-..|.+.|+
T Consensus       224 ~A~~~~~~al~~~----p~~~~a~~~lg~~~~~~g~  255 (323)
T d1fcha_         224 EAVAAYRRALELQ----PGYIRSRYNLGISCINLGA  255 (323)
T ss_dssp             HHHHHHHHHHHHC----TTCHHHHHHHHHHHHHHTC
T ss_pred             hHHHHHHHHHHHh----hccHHHHHHHHHHHHHCCC
Confidence            6666666665532    33 3345555555655554


No 8  
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.91  E-value=0.00053  Score=51.17  Aligned_cols=134  Identities=9%  Similarity=-0.042  Sum_probs=102.1

Q ss_pred             cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHH
Q 047392          110 LGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEAL  189 (258)
Q Consensus       110 ~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~  189 (258)
                      .+++.|++.|.++.     .|+..+|.-+-.++.+.|++++|.+.|++-.+..  | -+...|+.+=.+|.+.|++++|.
T Consensus        19 ~d~~~Al~~~~~i~-----~~~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ld--p-~~~~a~~~~g~~~~~~g~~~~A~   90 (192)
T d1hh8a_          19 KDWKGALDAFSAVQ-----DPHSRICFNIGCMYTILKNMTEAEKAFTRSINRD--K-HLAVAYFQRGMLYYQTEKYDLAI   90 (192)
T ss_dssp             TCHHHHHHHHHTSS-----SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHHTTCHHHHH
T ss_pred             CCHHHHHHHHHhcC-----CCCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh--h-hhhhhHHHHHHHHHhhccHHHHH
Confidence            34779999998654     3778888889999999999999999999998874  2 25668999999999999999999


Q ss_pred             HHHHHHHhC------------CCC--CC-HHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHHH
Q 047392          190 ATFYRMKQF------------RCR--PD-VYAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPDVYTYTILISSYCK  253 (258)
Q Consensus       190 ~l~~~M~~~------------g~~--p~-~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~~  253 (258)
                      +-|++-...            |..  ++ ..++..+=.++.+.|++++|.+.|++.......  |+.......|..+.+
T Consensus        91 ~~~~kAl~~~~~n~~~~~~~~~~~~~~~~~e~~~n~a~~~~~~~~~~~A~~~l~~A~~~~~~--~~~~~~~~Al~~~~~  167 (192)
T d1hh8a_          91 KDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSE--PRHSKIDKAMECVWK  167 (192)
T ss_dssp             HHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCS--GGGGHHHHHHHHHHT
T ss_pred             HHHHHHHHhCccCchHHHHHhhhhcccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHh
Confidence            999987542            111  11 245556667889999999999999998876532  545555555555443


No 9  
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.89  E-value=0.0002  Score=51.64  Aligned_cols=92  Identities=10%  Similarity=-0.009  Sum_probs=68.0

Q ss_pred             HHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcC
Q 047392          139 GIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVG  218 (258)
Q Consensus       139 i~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g  218 (258)
                      -+.|.+.|++++|...|.+..+..  | -+...|..+-.+|...|++++|...|++..+.. +-+...|..+..++...|
T Consensus        17 gn~~~~~~~y~~A~~~~~~al~~~--p-~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~-p~~~~a~~~~g~~~~~~g   92 (159)
T d1a17a_          17 ANDYFKAKDYENAIKFYSQAIELN--P-SNAIYYGNRSLAYLRTECYGYALGDATRAIELD-KKYIKGYYRRAASNMALG   92 (159)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHS--T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHcCCHHHHHHHhhhccccc--h-hhhhhhhhhHHHHHhccccchHHHHHHHHHHHc-ccchHHHHHHHHHHHHcC
Confidence            345667888888888888877764  2 256677778888888888888888888877643 335567777888888888


Q ss_pred             CHHHHHHHHHHhHhCC
Q 047392          219 NFNKARFLLEQMELPG  234 (258)
Q Consensus       219 ~~~~a~~~f~~M~~~~  234 (258)
                      ++++|...|++.....
T Consensus        93 ~~~eA~~~~~~a~~~~  108 (159)
T d1a17a_          93 KFRAALRDYETVVKVK  108 (159)
T ss_dssp             CHHHHHHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHHHcC
Confidence            8888888888887643


No 10 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=97.86  E-value=0.00029  Score=52.27  Aligned_cols=98  Identities=14%  Similarity=0.005  Sum_probs=72.7

Q ss_pred             CCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC-CHHHHH
Q 047392          130 HNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRP-DVYAYN  208 (258)
Q Consensus       130 p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p-~~~ty~  208 (258)
                      |+...+...-+.+.+.|++++|...|++..+..  | -+...|+.+-.+|.+.|++++|+..|++..+.  .| +..+|.
T Consensus         2 ~~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~--p-~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l--~p~~~~a~~   76 (201)
T d2c2la1           2 PSAQELKEQGNRLFVGRKYPEAAACYGRAITRN--P-LVAVYYTNRALCYLKMQQPEQALADCRRALEL--DGQSVKAHF   76 (201)
T ss_dssp             CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--S-CCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--CTTCHHHHH
T ss_pred             hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--C-CCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHh--CCCcHHHHH
Confidence            555556666677788888888888888877653  1 25667888888888888888888888887653  34 466777


Q ss_pred             HHHHHHHHcCCHHHHHHHHHHhHh
Q 047392          209 VVINALCRVGNFNKARFLLEQMEL  232 (258)
Q Consensus       209 ~li~~~~~~g~~~~a~~~f~~M~~  232 (258)
                      .+-.+|.+.|++++|...|++...
T Consensus        77 ~lg~~~~~l~~~~~A~~~~~~al~  100 (201)
T d2c2la1          77 FLGQCQLEMESYDEAIANLQRAYS  100 (201)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHH
Confidence            788888888888888888887653


No 11 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.76  E-value=0.00014  Score=50.44  Aligned_cols=107  Identities=9%  Similarity=-0.007  Sum_probs=82.2

Q ss_pred             HHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCC---hHHHHHHHHHHHhCCCCCCH-HHHHHHH
Q 047392          136 KEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGL---VNEALATFYRMKQFRCRPDV-YAYNVVI  211 (258)
Q Consensus       136 ~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~---~~~a~~l~~~M~~~g~~p~~-~ty~~li  211 (258)
                      ..+++.+...+++++|.+.|++....+   ..+..++..+-.++.+.++   +++|+++|++.....-.|+. .+|..+=
T Consensus         3 ~~l~n~~~~~~~l~~Ae~~Y~~aL~~~---p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~~~~~~~~~~~~Lg   79 (122)
T d1nzna_           3 EAVLNELVSVEDLLKFEKKFQSEKAAG---SVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLA   79 (122)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHS---CCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred             HHHHHHhcCHHHHHHHHHHHHHHHhhC---CCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence            568888999999999999999998875   2266678888888887554   55799999998875533432 3677777


Q ss_pred             HHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHH
Q 047392          212 NALCRVGNFNKARFLLEQMELPGFRCPPDVYTYTILIS  249 (258)
Q Consensus       212 ~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~  249 (258)
                      .+|.+.|++++|.+.|++..+..    |+-.-...+..
T Consensus        80 ~~y~~~g~~~~A~~~~~~aL~~~----P~~~~A~~l~~  113 (122)
T d1nzna_          80 VGNYRLKEYEKALKYVRGLLQTE----PQNNQAKELER  113 (122)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHC----TTCHHHHHHHH
T ss_pred             HHHHHHhhhHHHHHHHHHHHHhC----cCCHHHHHHHH
Confidence            88899999999999999999843    87655444443


No 12 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=97.61  E-value=0.0027  Score=48.54  Aligned_cols=119  Identities=12%  Similarity=-0.080  Sum_probs=76.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCC--HHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHH
Q 047392          112 INKATEFYHWVERFFHFFHN--EVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEAL  189 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~--~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~  189 (258)
                      .+.|+.-+++........+.  ..+|..+-..|.+.|++++|.+.|++..+-.  | -+..+|+.+-.+|.+.|++++|+
T Consensus        15 ~e~al~~~~e~l~~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~--p-~~~~a~~~lg~~~~~~g~~~~A~   91 (259)
T d1xnfa_          15 QEVILARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIR--P-DMPEVFNYLGIYLTQAGNFDAAY   91 (259)
T ss_dssp             HHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--C-CCHHHHHHHHHHHHHTTCHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccC--C-CCHHHHhhhchHHHHHHHHHHhh
Confidence            34555555555533222221  2244445566777788888888888777653  1 14557777888888888888888


Q ss_pred             HHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCC
Q 047392          190 ATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPG  234 (258)
Q Consensus       190 ~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~  234 (258)
                      +.|++..+.. +-+..+|..+-..+...|+.++|.+.|++..+..
T Consensus        92 ~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~  135 (259)
T d1xnfa_          92 EAFDSVLELD-PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD  135 (259)
T ss_dssp             HHHHHHHHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred             hhhhHHHHHH-hhhhhhHHHHHHHHHHHhhHHHHHHHHHHHHhhc
Confidence            8888877632 2235566677777777888888888887776643


No 13 
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.55  E-value=0.0015  Score=52.46  Aligned_cols=116  Identities=4%  Similarity=-0.070  Sum_probs=72.3

Q ss_pred             HHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCC-hHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHH
Q 047392          113 NKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNN-VKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALAT  191 (258)
Q Consensus       113 ~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~-~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l  191 (258)
                      ++|++++++.-+-  -+-+...|+..-..+...|+ +++|.+.++...+...   -+..+|+.+-..+.+.|++++|++.
T Consensus        60 ~~Al~~~~~ai~l--nP~~~~a~~~r~~~l~~l~~~~~eal~~~~~al~~~p---~~~~a~~~~~~~~~~l~~~~eAl~~  134 (315)
T d2h6fa1          60 ERAFKLTRDAIEL--NAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP---KNYQVWHHRRVLVEWLRDPSQELEF  134 (315)
T ss_dssp             HHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred             HHHHHHHHHHHHH--CCCChHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHH---hhhhHHHHHhHHHHhhccHHHHHHH
Confidence            3667777766532  12234455666556655553 6777777777666531   1455677777777777777777777


Q ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCC
Q 047392          192 FYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPG  234 (258)
Q Consensus       192 ~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~  234 (258)
                      ++++.+.. +-+...|+.+-..+.+.|++++|.+.|++..+..
T Consensus       135 ~~kal~~d-p~n~~a~~~~~~~~~~~~~~~~Al~~~~~al~~~  176 (315)
T d2h6fa1         135 IADILNQD-AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKED  176 (315)
T ss_dssp             HHHHHHHC-TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC
T ss_pred             Hhhhhhhh-hcchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHC
Confidence            77776532 2346667777777777777777777777776644


No 14 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=97.55  E-value=0.00051  Score=46.48  Aligned_cols=90  Identities=11%  Similarity=0.005  Sum_probs=75.3

Q ss_pred             HHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHc
Q 047392          138 MGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRV  217 (258)
Q Consensus       138 li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~  217 (258)
                      +-..+.+.|++++|...|++..+..  | -+...|..+-.+|.+.|++++|+..|++..+.. +-+...|..+-..|...
T Consensus        22 ~g~~~~~~g~~~~A~~~~~~al~~~--p-~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~a~~~la~~y~~~   97 (112)
T d1hxia_          22 EGLSMLKLANLAEAALAFEAVCQKE--P-EREEAWRSLGLTQAENEKDGLAIIALNHARMLD-PKDIAVHAALAVSHTNE   97 (112)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHS--T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhHHHHHHHhhhcccc--c-ccchhhhhhhhhhhhhhhHHHhhcccccccccc-cccccchHHHHHHHHHC
Confidence            3445778999999999999988874  2 156789999999999999999999999987743 34578888899999999


Q ss_pred             CCHHHHHHHHHHhH
Q 047392          218 GNFNKARFLLEQME  231 (258)
Q Consensus       218 g~~~~a~~~f~~M~  231 (258)
                      |+.++|.+.|++..
T Consensus        98 g~~~~A~~~l~~~l  111 (112)
T d1hxia_          98 HNANAALASLRAWL  111 (112)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHh
Confidence            99999999998754


No 15 
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.32  E-value=0.0065  Score=43.94  Aligned_cols=97  Identities=12%  Similarity=0.005  Sum_probs=66.5

Q ss_pred             HHHHHHHccCChHHHHHHHHHHHHcCCC-CC-----------cCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH
Q 047392          137 EMGIVFARGNNVKGLWDFLKEMSRRGNG-EL-----------VTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDV  204 (258)
Q Consensus       137 ~li~~~~~~g~~~~a~~~~~~m~~~g~~-~~-----------~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~  204 (258)
                      ..-+.+.+.|++++|.+.|.+..+.--. ..           .-..+|+.+-.+|.+.|++++|+..+++..+.. +-++
T Consensus        18 ~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~al~~~-p~~~   96 (170)
T d1p5qa1          18 ERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD-SNNE   96 (170)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCH
T ss_pred             HHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhhhhcc-ccch
Confidence            3445667777787777777766554110 00           012356677778888888888888888877643 2367


Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHhHhCC
Q 047392          205 YAYNVVINALCRVGNFNKARFLLEQMELPG  234 (258)
Q Consensus       205 ~ty~~li~~~~~~g~~~~a~~~f~~M~~~~  234 (258)
                      .+|..+-.+|...|++++|...|++..+..
T Consensus        97 ~a~~~~g~~~~~~g~~~~A~~~~~~al~l~  126 (170)
T d1p5qa1          97 KGLSRRGEAHLAVNDFELARADFQKVLQLY  126 (170)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred             hhhHHHHHHHHHhhhHHHHHHHHHHHHHhC
Confidence            777777788888888888888888887743


No 16 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.31  E-value=0.0035  Score=46.04  Aligned_cols=101  Identities=12%  Similarity=0.004  Sum_probs=72.1

Q ss_pred             HHHHccCChHHHHHHHHHHHHc--CCC-CC---c-------------CHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCC
Q 047392          140 IVFARGNNVKGLWDFLKEMSRR--GNG-EL---V-------------TTSTVTCLIKVLGEEGLVNEALATFYRMKQFRC  200 (258)
Q Consensus       140 ~~~~~~g~~~~a~~~~~~m~~~--g~~-~~---~-------------~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~  200 (258)
                      ......|++++|.+.|.+-.+-  |.. +.   .             ....+..+...+.+.|++++|+..+++..+.. 
T Consensus        19 ~~~~~~g~~e~A~~~~~~AL~l~rG~~l~~~~~~~w~~~~r~~l~~~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~-   97 (179)
T d2ff4a2          19 VHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFEH-   97 (179)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-
T ss_pred             HHHHHCCCHHHHHHHHHHHHhhCcccccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhC-
Confidence            3455667777776666665543  100 00   0             12357778888999999999999999987642 


Q ss_pred             CCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHh-----CCCCCCCCHHH
Q 047392          201 RPDVYAYNVVINALCRVGNFNKARFLLEQMEL-----PGFRCPPDVYT  243 (258)
Q Consensus       201 ~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~-----~~~~~~pd~~t  243 (258)
                      +-+...|..++.+|.+.|+.++|.+.|+++..     .|+.  |...|
T Consensus        98 P~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~--P~~~l  143 (179)
T d2ff4a2          98 PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGID--PGPTL  143 (179)
T ss_dssp             TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCC--CCHHH
T ss_pred             CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCC--cCHHH
Confidence            45778899999999999999999999998743     5755  88766


No 17 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=97.24  E-value=0.012  Score=41.63  Aligned_cols=101  Identities=15%  Similarity=0.004  Sum_probs=78.8

Q ss_pred             HHHHHHccCChHHHHHHHHHHHHcCCCC--Cc-----------CHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH
Q 047392          138 MGIVFARGNNVKGLWDFLKEMSRRGNGE--LV-----------TTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDV  204 (258)
Q Consensus       138 li~~~~~~g~~~~a~~~~~~m~~~g~~~--~~-----------~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~  204 (258)
                      --+.+.+.|++++|...|.+..+.-...  ..           ...+|+.+-.+|.+.|++++|++.+++..+.. +-++
T Consensus        23 ~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~-p~~~  101 (153)
T d2fbna1          23 EGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID-KNNV  101 (153)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhcccccc-chhh
Confidence            3456678899999998888876541100  00           23467889999999999999999999988753 4578


Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHH
Q 047392          205 YAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPDVYT  243 (258)
Q Consensus       205 ~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~t  243 (258)
                      .+|..+-.++...|++++|...|++.....    |+-..
T Consensus       102 ka~~~~g~~~~~lg~~~~A~~~~~~al~l~----P~n~~  136 (153)
T d2fbna1         102 KALYKLGVANMYFGFLEEAKENLYKAASLN----PNNLD  136 (153)
T ss_dssp             HHHHHHHHHHHHHTCHHHHHHHHHHHHHHS----TTCHH
T ss_pred             hhhHHhHHHHHHcCCHHHHHHHHHHHHHhC----CCCHH
Confidence            999999999999999999999999998844    75443


No 18 
>d2h6fa1 a.118.6.1 (A:55-369) Protein farnesyltransferase alpha-subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.21  E-value=0.0055  Score=49.05  Aligned_cols=130  Identities=8%  Similarity=0.007  Sum_probs=96.3

Q ss_pred             HHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHH
Q 047392          112 INKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALAT  191 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l  191 (258)
                      .++|++.++...+.  -+-+..+|+.+-..+.+.|+.++|.+.++++.+.. +  -+...|+.+-..+.+.|++++|++.
T Consensus        94 ~~eal~~~~~al~~--~p~~~~a~~~~~~~~~~l~~~~eAl~~~~kal~~d-p--~n~~a~~~~~~~~~~~~~~~~Al~~  168 (315)
T d2h6fa1          94 LHEEMNYITAIIEE--QPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQD-A--KNYHAWQHRQWVIQEFKLWDNELQY  168 (315)
T ss_dssp             HHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHC-T--TCHHHHHHHHHHHHHHTCCTTHHHH
T ss_pred             HHHHHHHHHHHHHH--HHhhhhHHHHHhHHHHhhccHHHHHHHHhhhhhhh-h--cchHHHHHHHHHHHHHHhhHHHHHH
Confidence            56889999887643  23457788888888999999999999999998864 1  2677899999999999999999999


Q ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHcCC------HHHHHHHHHHhHhCCCCCCC-CHHHHHHHHHHH
Q 047392          192 FYRMKQFRCRPDVYAYNVVINALCRVGN------FNKARFLLEQMELPGFRCPP-DVYTYTILISSY  251 (258)
Q Consensus       192 ~~~M~~~g~~p~~~ty~~li~~~~~~g~------~~~a~~~f~~M~~~~~~~~p-d~~ty~~li~~~  251 (258)
                      |++..+.. +-+...|+.+-..+.+.+.      +++|.+.+.+.....    | |...|..+-..+
T Consensus       169 ~~~al~~~-p~n~~a~~~r~~~l~~~~~~~~~~~~~~ai~~~~~al~~~----P~~~~~~~~l~~ll  230 (315)
T d2h6fa1         169 VDQLLKED-VRNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLV----PHNESAWNYLKGIL  230 (315)
T ss_dssp             HHHHHHHC-TTCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHS----TTCHHHHHHHHHHH
T ss_pred             HHHHHHHC-CccHHHHHHHHHHHHHccccchhhhhHHhHHHHHHHHHhC----CCchHHHHHHHHHH
Confidence            99998753 2356677766555555554      567888888877644    4 455555554443


No 19 
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.17  E-value=0.0074  Score=42.88  Aligned_cols=110  Identities=11%  Similarity=0.005  Sum_probs=81.7

Q ss_pred             cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHH
Q 047392          110 LGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEAL  189 (258)
Q Consensus       110 ~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~  189 (258)
                      ...++|++.|.+..+.  -+-+...|..+-.+|.+.|++++|.+.|+...+..  | -+...|..+..+|...|++++|.
T Consensus        24 ~~y~~A~~~~~~al~~--~p~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~--p-~~~~a~~~~g~~~~~~g~~~eA~   98 (159)
T d1a17a_          24 KDYENAIKFYSQAIEL--NPSNAIYYGNRSLAYLRTECYGYALGDATRAIELD--K-KYIKGYYRRAASNMALGKFRAAL   98 (159)
T ss_dssp             TCHHHHHHHHHHHHHH--STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHHTTCHHHHH
T ss_pred             CCHHHHHHHhhhcccc--chhhhhhhhhhHHHHHhccccchHHHHHHHHHHHc--c-cchHHHHHHHHHHHHcCCHHHHH
Confidence            3467999999998753  23567788889999999999999999999998874  2 26678999999999999999999


Q ss_pred             HHHHHHHhCCCCCC-HHHHHHHHHH--HHHcCCHHHHHHH
Q 047392          190 ATFYRMKQFRCRPD-VYAYNVVINA--LCRVGNFNKARFL  226 (258)
Q Consensus       190 ~l~~~M~~~g~~p~-~~ty~~li~~--~~~~g~~~~a~~~  226 (258)
                      +.|++.....  |+ ...+..+-.+  ....+.+++|...
T Consensus        99 ~~~~~a~~~~--p~~~~~~~~l~~~~~~~~~~~~~~a~~~  136 (159)
T d1a17a_          99 RDYETVVKVK--PHDKDAKMKYQECNKIVKQKAFERAIAG  136 (159)
T ss_dssp             HHHHHHHHHS--TTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence            9999998753  44 4444333323  2233445555443


No 20 
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=97.08  E-value=0.0019  Score=47.50  Aligned_cols=72  Identities=13%  Similarity=0.048  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHH-----hCCCCCCHHH
Q 047392          132 EVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMK-----QFRCRPDVYA  206 (258)
Q Consensus       132 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~-----~~g~~p~~~t  206 (258)
                      ...+..+...+.+.|++++|...+++..+.. +  .+...|..++.+|.+.|+.++|++.|+++.     +.|+.|+..+
T Consensus        67 ~~a~~~la~~~~~~g~~~~Al~~~~~al~~~-P--~~e~~~~~l~~al~~~Gr~~eAl~~y~~~~~~L~~eLG~~P~~~l  143 (179)
T d2ff4a2          67 VLAHTAKAEAEIACGRASAVIAELEALTFEH-P--YREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTL  143 (179)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-T--TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred             HHHHHHHHHHHHHCCCchHHHHHHHHHHHhC-C--ccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHhCCCcCHHH
Confidence            3467788999999999999999999998874 2  377899999999999999999999999974     4699999876


No 21 
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.08  E-value=0.0085  Score=41.06  Aligned_cols=97  Identities=14%  Similarity=0.100  Sum_probs=76.4

Q ss_pred             HHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC--CCCC----HHHHH
Q 047392          135 CKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFR--CRPD----VYAYN  208 (258)
Q Consensus       135 y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g--~~p~----~~ty~  208 (258)
                      +..+=+.+.+.|++++|.+.|.+..+.+  | -+...|..+-.+|.+.|++++|++.++++.+..  ....    ..+|.
T Consensus         7 ~k~~G~~~~~~~~y~~Ai~~y~~al~~~--p-~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~~~~~~a~~~~   83 (128)
T d1elra_           7 EKELGNDAYKKKDFDTALKHYDKAKELD--P-TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA   83 (128)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCHHHHHHHHHHHHHhC--c-ccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHHHHHHHHHHHH
Confidence            4456677889999999999999998874  2 267789999999999999999999999987521  1111    24666


Q ss_pred             HHHHHHHHcCCHHHHHHHHHHhHhCC
Q 047392          209 VVINALCRVGNFNKARFLLEQMELPG  234 (258)
Q Consensus       209 ~li~~~~~~g~~~~a~~~f~~M~~~~  234 (258)
                      .+=..+...+++++|.+.|++-....
T Consensus        84 ~lg~~~~~~~~~~~A~~~~~kal~~~  109 (128)
T d1elra_          84 RIGNSYFKEEKYKDAIHFYNKSLAEH  109 (128)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCHHHHHHHHHHHHhcC
Confidence            77778888999999999998877643


No 22 
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.06  E-value=0.011  Score=39.72  Aligned_cols=91  Identities=12%  Similarity=-0.010  Sum_probs=75.1

Q ss_pred             cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHH
Q 047392          110 LGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEAL  189 (258)
Q Consensus       110 ~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~  189 (258)
                      ...++|++.|++....  -+-+...|..+-.++.+.|++++|...+++..+.+.   -+...|..+-.++...|++++|+
T Consensus        17 g~~~eAi~~~~~al~~--~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p---~~~~~~~~~g~~~~~~~~~~~A~   91 (117)
T d1elwa_          17 GNIDDALQCYSEAIKL--DPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP---DWGKGYSRKAAALEFLNRFEEAK   91 (117)
T ss_dssp             TCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT---TCHHHHHHHHHHHHHTTCHHHHH
T ss_pred             CCHHHHHHHHHHHHhc--CCcchhhhhcccccccccccccccchhhhhHHHhcc---chhhHHHHHHHHHHHccCHHHHH
Confidence            3477999999998743  245677899999999999999999999999998752   26678999999999999999999


Q ss_pred             HHHHHHHhCCCCCCHHHH
Q 047392          190 ATFYRMKQFRCRPDVYAY  207 (258)
Q Consensus       190 ~l~~~M~~~g~~p~~~ty  207 (258)
                      ..|++..+.  .|+...+
T Consensus        92 ~~~~~a~~~--~p~~~~~  107 (117)
T d1elwa_          92 RTYEEGLKH--EANNPQL  107 (117)
T ss_dssp             HHHHHHHTT--CTTCHHH
T ss_pred             HHHHHHHHh--CCCCHHH
Confidence            999999874  4654433


No 23 
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=96.84  E-value=0.016  Score=43.97  Aligned_cols=119  Identities=10%  Similarity=-0.062  Sum_probs=87.8

Q ss_pred             ccCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHH
Q 047392          109 TLGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEA  188 (258)
Q Consensus       109 ~~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a  188 (258)
                      ....++|++.|++...-  -+-+..+|+.+-.++.+.|++++|.+.|++..+..  |. +..+|..+-.+|...|++++|
T Consensus        50 ~g~~~~A~~~~~~al~l--~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~-~~~a~~~lg~~~~~~g~~~~A  124 (259)
T d1xnfa_          50 LGLRALARNDFSQALAI--RPDMPEVFNYLGIYLTQAGNFDAAYEAFDSVLELD--PT-YNYAHLNRGIALYYGGRDKLA  124 (259)
T ss_dssp             TTCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-CTHHHHHHHHHHHHTTCHHHH
T ss_pred             CCCHHHHHHHHHHhhcc--CCCCHHHHhhhchHHHHHHHHHHhhhhhhHHHHHH--hh-hhhhHHHHHHHHHHHhhHHHH
Confidence            34467999999998743  12457789999999999999999999999998864  22 345788899999999999999


Q ss_pred             HHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhC
Q 047392          189 LATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELP  233 (258)
Q Consensus       189 ~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~  233 (258)
                      .+.|++..+.. +.+......+.-++.+.+..+.+..+.......
T Consensus       125 ~~~~~~al~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (259)
T d1xnfa_         125 QDDLLAFYQDD-PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKS  168 (259)
T ss_dssp             HHHHHHHHHHC-TTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHhhc-cccHHHHHHHHHHHHHhhhHHHHHHHHHHhhcc
Confidence            99999987643 234444444445555666666666666655543


No 24 
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=96.71  E-value=0.0094  Score=43.53  Aligned_cols=85  Identities=11%  Similarity=-0.148  Sum_probs=68.8

Q ss_pred             CHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCC-HHHHHH
Q 047392          168 TTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPD-VYTYTI  246 (258)
Q Consensus       168 ~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd-~~ty~~  246 (258)
                      ++..+-..=+.|.+.|++++|++.|++..+.. +-+...|+.+-.+|.+.|++++|...|++.....    |+ ..+|..
T Consensus         3 ~a~~l~~~Gn~~~~~g~~~~Ai~~~~kal~~~-p~~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~----p~~~~a~~~   77 (201)
T d2c2la1           3 SAQELKEQGNRLFVGRKYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD----GQSVKAHFF   77 (201)
T ss_dssp             CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC----TTCHHHHHH
T ss_pred             hHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhC----CCcHHHHHH
Confidence            44445555577899999999999999987643 4577889999999999999999999999998743    75 567888


Q ss_pred             HHHHHHHcCCC
Q 047392          247 LISSYCKYGMQ  257 (258)
Q Consensus       247 li~~~~~~g~~  257 (258)
                      +-.+|.+.|++
T Consensus        78 lg~~~~~l~~~   88 (201)
T d2c2la1          78 LGQCQLEMESY   88 (201)
T ss_dssp             HHHHHHHTTCH
T ss_pred             HHHHHHHCCCH
Confidence            88888888764


No 25 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=96.61  E-value=0.016  Score=41.54  Aligned_cols=97  Identities=12%  Similarity=-0.005  Sum_probs=61.2

Q ss_pred             HHHHHHHHccCChHHHHHHHHHHHHc---CCCCC---------cCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC
Q 047392          136 KEMGIVFARGNNVKGLWDFLKEMSRR---GNGEL---------VTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPD  203 (258)
Q Consensus       136 ~~li~~~~~~g~~~~a~~~~~~m~~~---g~~~~---------~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~  203 (258)
                      ...-..+.+.|++++|...|.+-...   .....         .....|+-+-.+|.+.|++++|+..+++..... +.+
T Consensus        19 ~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~-p~~   97 (168)
T d1kt1a1          19 KEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLD-SAN   97 (168)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTC
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhhhhcc-cch
Confidence            34445566677777777777554332   11100         012245556667777888888888777776532 456


Q ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHhHhC
Q 047392          204 VYAYNVVINALCRVGNFNKARFLLEQMELP  233 (258)
Q Consensus       204 ~~ty~~li~~~~~~g~~~~a~~~f~~M~~~  233 (258)
                      ...|..+-.++...|++++|...|++....
T Consensus        98 ~~a~~~~~~~~~~l~~~~~A~~~~~~al~l  127 (168)
T d1kt1a1          98 EKGLYRRGEAQLLMNEFESAKGDFEKVLEV  127 (168)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence            667777777777888888888888887763


No 26 
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=96.60  E-value=0.0088  Score=39.94  Aligned_cols=80  Identities=15%  Similarity=0.023  Sum_probs=67.4

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHH
Q 047392          111 GINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALA  190 (258)
Q Consensus       111 ~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~  190 (258)
                      .+++|+..|++.....  +-+...|..+-.++.+.|++++|...|++..+-.  | -+...|..+-.+|...|++++|.+
T Consensus        31 ~~~~A~~~~~~al~~~--p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~--p-~~~~a~~~la~~y~~~g~~~~A~~  105 (112)
T d1hxia_          31 NLAEAALAFEAVCQKE--PEREEAWRSLGLTQAENEKDGLAIIALNHARMLD--P-KDIAVHAALAVSHTNEHNANAALA  105 (112)
T ss_dssp             CHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHhhhcccc--cccchhhhhhhhhhhhhhhHHHhhcccccccccc--c-ccccchHHHHHHHHHCCCHHHHHH
Confidence            3669999999987542  2358889999999999999999999999988864  2 256789999999999999999999


Q ss_pred             HHHHH
Q 047392          191 TFYRM  195 (258)
Q Consensus       191 l~~~M  195 (258)
                      .|++.
T Consensus       106 ~l~~~  110 (112)
T d1hxia_         106 SLRAW  110 (112)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99875


No 27 
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.60  E-value=0.011  Score=43.67  Aligned_cols=85  Identities=14%  Similarity=0.020  Sum_probs=71.4

Q ss_pred             HHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCH
Q 047392          141 VFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNF  220 (258)
Q Consensus       141 ~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~  220 (258)
                      .+...|++++|.+.|+++    ..+  +..+|..+=.+|.+.|++++|++.|++-.+.. +-+...|..+=.++.+.|+.
T Consensus        14 ~~~~~~d~~~Al~~~~~i----~~~--~~~~~~nlG~~~~~~g~~~~A~~~~~kAl~ld-p~~~~a~~~~g~~~~~~g~~   86 (192)
T d1hh8a_          14 LAADKKDWKGALDAFSAV----QDP--HSRICFNIGCMYTILKNMTEAEKAFTRSINRD-KHLAVAYFQRGMLYYQTEKY   86 (192)
T ss_dssp             HHHHTTCHHHHHHHHHTS----SSC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCH
T ss_pred             HHHHCCCHHHHHHHHHhc----CCC--CHHHHHHHHHHHHHcCCchhHHHHHHHHHHHh-hhhhhhHHHHHHHHHhhccH
Confidence            456789999999999864    223  66788899999999999999999999998743 34677888888889999999


Q ss_pred             HHHHHHHHHhHh
Q 047392          221 NKARFLLEQMEL  232 (258)
Q Consensus       221 ~~a~~~f~~M~~  232 (258)
                      ++|.+.|++-..
T Consensus        87 ~~A~~~~~kAl~   98 (192)
T d1hh8a_          87 DLAIKDLKEALI   98 (192)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998764


No 28 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=96.57  E-value=0.032  Score=39.82  Aligned_cols=97  Identities=12%  Similarity=0.008  Sum_probs=74.8

Q ss_pred             HHHHHHHHccCChHHHHHHHHHHHHcC--------------CCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCC
Q 047392          136 KEMGIVFARGNNVKGLWDFLKEMSRRG--------------NGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCR  201 (258)
Q Consensus       136 ~~li~~~~~~g~~~~a~~~~~~m~~~g--------------~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~  201 (258)
                      ...-..+.+.|++++|.+.|.+..+..              ..| .+...|+.+-.+|.+.|++++|+..+++..+.. +
T Consensus        31 ~~~~~~~~~~~~y~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~-~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~-p  108 (169)
T d1ihga1          31 KNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQP-VALSCVLNIGACKLKMSDWQGAVDSCLEALEID-P  108 (169)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHH-HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-T
T ss_pred             HHHHHHHHHcCCHHHHHHHHHHHHHhhhhhhhhhhhHHHHHhCh-hhHHHHHHHHHHHHhhcccchhhhhhhhhhhhh-h
Confidence            334555677888888888887664320              001 134467778889999999999999999998753 4


Q ss_pred             CCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCC
Q 047392          202 PDVYAYNVVINALCRVGNFNKARFLLEQMELPG  234 (258)
Q Consensus       202 p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~  234 (258)
                      -+...|..+-.++.+.|++++|.+.|++..+..
T Consensus       109 ~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l~  141 (169)
T d1ihga1         109 SNTKALYRRAQGWQGLKEYDQALADLKKAQEIA  141 (169)
T ss_dssp             TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred             hhhhHHHhHHHHHHHccCHHHHHHHHHHHHHhC
Confidence            577889999999999999999999999999854


No 29 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.31  E-value=0.016  Score=45.33  Aligned_cols=129  Identities=11%  Similarity=-0.027  Sum_probs=88.5

Q ss_pred             cccccCHHHHHHHHHHHHhh---CCCCC-CHHHHHHHHHHHHccCChHHHHHHHHHHHHcC---CCCCcCHHHHHHHHHH
Q 047392          106 QKVTLGINKATEFYHWVERF---FHFFH-NEVTCKEMGIVFARGNNVKGLWDFLKEMSRRG---NGELVTTSTVTCLIKV  178 (258)
Q Consensus       106 ~~~~~~~~~a~~~f~~m~~~---~~~~p-~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g---~~~~~~~~t~~~li~~  178 (258)
                      |.....+++|.+.|.+..+-   .+-.+ -..+|+.+-.+|.+.|++++|.+.+++..+-.   -.+.....++..+...
T Consensus        47 y~~~~~~~~A~~~y~kA~~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~  126 (290)
T d1qqea_          47 YRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEI  126 (290)
T ss_dssp             HHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHCcCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHh
Confidence            33344456888888776432   11112 24578889999999999999999988654431   1111124456667667


Q ss_pred             HHh-cCChHHHHHHHHHHHh----CCCCC-CHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCC
Q 047392          179 LGE-EGLVNEALATFYRMKQ----FRCRP-DVYAYNVVINALCRVGNFNKARFLLEQMELPG  234 (258)
Q Consensus       179 ~~~-~g~~~~a~~l~~~M~~----~g~~p-~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~  234 (258)
                      |-. .|++++|.+.+++..+    .+-.+ -..+|..+...+.+.|++++|.+.|++.....
T Consensus       127 ~~~~~~~~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~~~g~y~~A~~~~~~~~~~~  188 (290)
T d1qqea_         127 LENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSS  188 (290)
T ss_dssp             HHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred             HhhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHHHcChHHHHHHHHHHHHHhC
Confidence            744 6999999999998753    22222 13557888899999999999999999987643


No 30 
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.22  E-value=0.11  Score=36.89  Aligned_cols=85  Identities=7%  Similarity=-0.008  Sum_probs=65.8

Q ss_pred             CHHHHHHHHHHHHhhCCCCCC-------------HHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHH
Q 047392          111 GINKATEFYHWVERFFHFFHN-------------EVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIK  177 (258)
Q Consensus       111 ~~~~a~~~f~~m~~~~~~~p~-------------~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~  177 (258)
                      ..++|++.|.+........+.             ..+|+-+-.+|.+.|++++|...++...+..  | -++..|..+-.
T Consensus        28 ~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~al~~~--p-~~~~a~~~~g~  104 (170)
T d1p5qa1          28 KYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELD--S-NNEKGLSRRGE  104 (170)
T ss_dssp             CHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--T-TCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhhhhcc--c-cchhhhHHHHH
Confidence            356777777766533221111             3457778888999999999999999998874  2 26778999999


Q ss_pred             HHHhcCChHHHHHHHHHHHhC
Q 047392          178 VLGEEGLVNEALATFYRMKQF  198 (258)
Q Consensus       178 ~~~~~g~~~~a~~l~~~M~~~  198 (258)
                      +|...|++++|...|++..+.
T Consensus       105 ~~~~~g~~~~A~~~~~~al~l  125 (170)
T d1p5qa1         105 AHLAVNDFELARADFQKVLQL  125 (170)
T ss_dssp             HHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHhhhHHHHHHHHHHHHHh
Confidence            999999999999999999874


No 31 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=96.15  E-value=0.0088  Score=46.74  Aligned_cols=111  Identities=10%  Similarity=-0.047  Sum_probs=74.5

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHH
Q 047392          111 GINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALA  190 (258)
Q Consensus       111 ~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~  190 (258)
                      ++++|++.|++..+.  -+-|...+..+...|+..|++++|.+.++...+..  |. +...+..+-..+.       +..
T Consensus        11 ~l~eAl~~l~~al~~--~P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l~--P~-~~~~~~~l~~ll~-------a~~   78 (264)
T d1zbpa1          11 QLQQALELLIEAIKA--SPKDASLRSSFIELLCIDGDFERADEQLMQSIKLF--PE-YLPGASQLRHLVK-------AAQ   78 (264)
T ss_dssp             CHHHHHHHHHHHHHT--CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--GG-GHHHHHHHHHHHH-------HHH
T ss_pred             CHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC--CC-cHHHHHHHHHHHH-------hcc
Confidence            467999999998742  34667899999999999999999999999998763  31 2223333333332       222


Q ss_pred             HHHHHHh-------CCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhC
Q 047392          191 TFYRMKQ-------FRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELP  233 (258)
Q Consensus       191 l~~~M~~-------~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~  233 (258)
                      -.+++..       .+-.++...+......+.+.|+.++|.+++++..+.
T Consensus        79 ~~~~a~~~~~~~~~~~~p~~~~~~l~~a~~~~~~gd~~~A~~~~~~a~e~  128 (264)
T d1zbpa1          79 ARKDFAQGAATAKVLGENEELTKSLVSFNLSMVSQDYEQVSELALQIEEL  128 (264)
T ss_dssp             HHHHHTTSCCCEECCCSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             ccHHHHHHhhhhhcccCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhc
Confidence            2333322       121233344445556678899999999999998764


No 32 
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.01  E-value=0.17  Score=39.17  Aligned_cols=143  Identities=9%  Similarity=-0.074  Sum_probs=87.2

Q ss_pred             ccCHHHHHHHHHHHHh---hCC-CCCCHHHHHHHHHHH-HccCChHHHHHHHHHHHHc---CCCCCcCHHHHHHHHHHHH
Q 047392          109 TLGINKATEFYHWVER---FFH-FFHNEVTCKEMGIVF-ARGNNVKGLWDFLKEMSRR---GNGELVTTSTVTCLIKVLG  180 (258)
Q Consensus       109 ~~~~~~a~~~f~~m~~---~~~-~~p~~~~y~~li~~~-~~~g~~~~a~~~~~~m~~~---g~~~~~~~~t~~~li~~~~  180 (258)
                      ...+++|++.|++..+   ..+ ......++..+...| ...|++++|.+.+++..+-   .-.+..-..+|..+...|.
T Consensus        90 ~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~~~~~~~~~~~~~~la~~~~  169 (290)
T d1qqea_          90 GGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQSVALSNKCFIKCADLKA  169 (290)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred             hCCcHHHHHHHHHhhHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhHHHHHHHHHH
Confidence            3345677777775432   111 111234555566666 4569999999999876432   1111112346888999999


Q ss_pred             hcCChHHHHHHHHHHHhCCCC-----CCH-HHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCC---HHHHHHHHHHH
Q 047392          181 EEGLVNEALATFYRMKQFRCR-----PDV-YAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPD---VYTYTILISSY  251 (258)
Q Consensus       181 ~~g~~~~a~~l~~~M~~~g~~-----p~~-~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd---~~ty~~li~~~  251 (258)
                      +.|++++|.+.|++.....-.     ... ..|..++..+...|+.+.|...|++....... -++   ......++.++
T Consensus       170 ~~g~y~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~A~~~~~~~~~~~~~-~~~sre~~~l~~l~~a~  248 (290)
T d1qqea_         170 LDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPN-FADSRESNFLKSLIDAV  248 (290)
T ss_dssp             HTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----------HHHHHHHHHHH
T ss_pred             HcChHHHHHHHHHHHHHhCccchhhhhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC-ccchHHHHHHHHHHHHH
Confidence            999999999999998763211     111 12334445666789999999999999875411 022   23445566655


Q ss_pred             H
Q 047392          252 C  252 (258)
Q Consensus       252 ~  252 (258)
                      -
T Consensus       249 ~  249 (290)
T d1qqea_         249 N  249 (290)
T ss_dssp             H
T ss_pred             H
Confidence            4


No 33 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=95.95  E-value=0.12  Score=36.01  Aligned_cols=100  Identities=11%  Similarity=-0.049  Sum_probs=72.2

Q ss_pred             HHHHHH--HHHHHccCChHHHHHHHHHHHHcCCC-CCc--------CHHHHHHHHHHHHhcCChHHHHHHHHHHHhC---
Q 047392          133 VTCKEM--GIVFARGNNVKGLWDFLKEMSRRGNG-ELV--------TTSTVTCLIKVLGEEGLVNEALATFYRMKQF---  198 (258)
Q Consensus       133 ~~y~~l--i~~~~~~g~~~~a~~~~~~m~~~g~~-~~~--------~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~---  198 (258)
                      .+|..+  .....+.|++++|...|++-.+-.-. |..        ....|+.+-.+|.+.|++++|.+-+++..+.   
T Consensus         8 ~a~~~l~~g~~~~~~g~y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~   87 (156)
T d2hr2a1           8 GAYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNR   87 (156)
T ss_dssp             HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccc
Confidence            356666  34456789999999999998763211 100        2457889999999999999999999997641   


Q ss_pred             --CCCCC-----HHHHHHHHHHHHHcCCHHHHHHHHHHhHh
Q 047392          199 --RCRPD-----VYAYNVVINALCRVGNFNKARFLLEQMEL  232 (258)
Q Consensus       199 --g~~p~-----~~ty~~li~~~~~~g~~~~a~~~f~~M~~  232 (258)
                        ...++     ...|+.+=.+|...|+.++|...|++..+
T Consensus        88 ~~~~~~~~~~~~~~a~~~~g~~~~~lg~~eeA~~~~~~Al~  128 (156)
T d2hr2a1          88 RGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE  128 (156)
T ss_dssp             HCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             cccccccccchhHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence              12222     22456667889999999999999998653


No 34 
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.86  E-value=0.055  Score=36.58  Aligned_cols=91  Identities=14%  Similarity=-0.034  Sum_probs=67.9

Q ss_pred             HHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCCh---HHHHHHHHHHHHcCCCCCcC-HHHHHHHHHHHHhcCChHH
Q 047392          112 INKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNV---KGLWDFLKEMSRRGNGELVT-TSTVTCLIKVLGEEGLVNE  187 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~---~~a~~~~~~m~~~g~~~~~~-~~t~~~li~~~~~~g~~~~  187 (258)
                      +++|.+.|+.....  -+.+..++..+-.++.+.++.   ++|.+++++..+..  |.++ ..+|..|=.+|.+.|++++
T Consensus        15 l~~Ae~~Y~~aL~~--~p~~~~~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~--~~~~~~~~~~~Lg~~y~~~g~~~~   90 (122)
T d1nzna_          15 LLKFEKKFQSEKAA--GSVSKSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG--SKEEQRDYVFYLAVGNYRLKEYEK   90 (122)
T ss_dssp             HHHHHHHHHHHHHH--SCCCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS--CHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHhh--CCCCHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhcc--CCchHHHHHHHHHHHHHHHhhhHH
Confidence            67999999988753  235667777788888876655   46999999987654  3223 2367778899999999999


Q ss_pred             HHHHHHHHHhCCCCCCHHHHH
Q 047392          188 ALATFYRMKQFRCRPDVYAYN  208 (258)
Q Consensus       188 a~~l~~~M~~~g~~p~~~ty~  208 (258)
                      |++.|++..+.  .|+-.-..
T Consensus        91 A~~~~~~aL~~--~P~~~~A~  109 (122)
T d1nzna_          91 ALKYVRGLLQT--EPQNNQAK  109 (122)
T ss_dssp             HHHHHHHHHHH--CTTCHHHH
T ss_pred             HHHHHHHHHHh--CcCCHHHH
Confidence            99999999884  47655433


No 35 
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=95.63  E-value=0.2  Score=34.87  Aligned_cols=69  Identities=10%  Similarity=0.116  Sum_probs=58.0

Q ss_pred             HHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHH
Q 047392          133 VTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYA  206 (258)
Q Consensus       133 ~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~t  206 (258)
                      .+|+-+-.+|.+.|++++|.+.+++..+..   .-++.+|..+-.+|...|++++|...|++..+..  |+-..
T Consensus        68 ~~~~Nla~~~~~l~~~~~Al~~~~~al~~~---p~~~ka~~~~g~~~~~lg~~~~A~~~~~~al~l~--P~n~~  136 (153)
T d2fbna1          68 SCNLNLATCYNKNKDYPKAIDHASKVLKID---KNNVKALYKLGVANMYFGFLEEAKENLYKAASLN--PNNLD  136 (153)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS--TTCHH
T ss_pred             HHHhhHHHHHHHhcccchhhhhhhcccccc---chhhhhhHHhHHHHHHcCCHHHHHHHHHHHHHhC--CCCHH
Confidence            467778888999999999999999988874   2377899999999999999999999999988743  65433


No 36 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=95.15  E-value=0.26  Score=37.86  Aligned_cols=120  Identities=9%  Similarity=-0.006  Sum_probs=83.6

Q ss_pred             CHHHHHHHHHHHHhhCCCCCC------HHHHHHHHHHHHccCChHHHHHHHHHHHHcCC---CCCcCHHHHHHHHHHHHh
Q 047392          111 GINKATEFYHWVERFFHFFHN------EVTCKEMGIVFARGNNVKGLWDFLKEMSRRGN---GELVTTSTVTCLIKVLGE  181 (258)
Q Consensus       111 ~~~~a~~~f~~m~~~~~~~p~------~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~---~~~~~~~t~~~li~~~~~  181 (258)
                      ++++|+++|++.....   |+      ...++.+-..+...|++++|.+.|++..+...   .......++..+...+..
T Consensus        27 ~~~~A~~~~~~aL~~~---~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (366)
T d1hz4a_          27 NPDEAERLAKLALEEL---PPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFA  103 (366)
T ss_dssp             CHHHHHHHHHHHHHTC---CTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHhhC---cCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence            3569999999876432   32      34677777888899999999999988765311   111123456777788899


Q ss_pred             cCChHHHHHHHHHHHh----CCCCCC---HHHHHHHHHHHHHcCCHHHHHHHHHHhHhC
Q 047392          182 EGLVNEALATFYRMKQ----FRCRPD---VYAYNVVINALCRVGNFNKARFLLEQMELP  233 (258)
Q Consensus       182 ~g~~~~a~~l~~~M~~----~g~~p~---~~ty~~li~~~~~~g~~~~a~~~f~~M~~~  233 (258)
                      .|++..|...+.+...    .+....   ...+..+-..+...|+++.+...+.+....
T Consensus       104 ~~~~~~a~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~  162 (366)
T d1hz4a_         104 QGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEV  162 (366)
T ss_dssp             TTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhHhcccchhhHHHHHHHHHHHHHHHhcchhhhHHHHHHHHHH
Confidence            9999999998887643    222211   234555667788899999999999888653


No 37 
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=95.06  E-value=0.34  Score=34.12  Aligned_cols=93  Identities=8%  Similarity=-0.022  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 047392          134 TCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINA  213 (258)
Q Consensus       134 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~  213 (258)
                      .|+-+-.+|.+.|++++|...+++..+..   ..+...|..+-.+|...|++++|.+.|++..+.  .|+.......+..
T Consensus        66 ~~~Nla~~~~~l~~~~~Ai~~~~~al~l~---p~~~~a~~~~~~~~~~l~~~~~A~~~~~~al~l--~P~n~~~~~~l~~  140 (168)
T d1kt1a1          66 AFLNLAMCYLKLREYTKAVECCDKALGLD---SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--NPQNKAARLQIFM  140 (168)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--CTTCHHHHHHHHH
T ss_pred             HHHhHHHHHHHhhhcccchhhhhhhhhcc---cchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHH
Confidence            45556677889999999999999998864   236778999999999999999999999999874  3554443333333


Q ss_pred             H-HHcCCH-HHHHHHHHHhH
Q 047392          214 L-CRVGNF-NKARFLLEQME  231 (258)
Q Consensus       214 ~-~~~g~~-~~a~~~f~~M~  231 (258)
                      + .+.+.. +...++|..|.
T Consensus       141 ~~~~~~~~~e~~kk~~~~~f  160 (168)
T d1kt1a1         141 CQKKAKEHNERDRRTYANMF  160 (168)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhHHHHHHHHHHHHH
Confidence            3 333332 33455555553


No 38 
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.95  E-value=0.017  Score=39.38  Aligned_cols=55  Identities=16%  Similarity=0.149  Sum_probs=48.5

Q ss_pred             HHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHh
Q 047392          177 KVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMEL  232 (258)
Q Consensus       177 ~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~  232 (258)
                      ..|.+.|++++|++.|++..+.+ +-+...|..+-.+|.+.|++++|.+.+++...
T Consensus        12 ~~~~~~~~y~~Ai~~y~~al~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~   66 (128)
T d1elra_          12 NDAYKKKDFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIE   66 (128)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHhHHHHHHHcCchHHHHHHHHHHHH
Confidence            46888999999999999998753 34688899999999999999999999999876


No 39 
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=94.81  E-value=0.65  Score=36.16  Aligned_cols=136  Identities=10%  Similarity=-0.052  Sum_probs=93.7

Q ss_pred             HHHHHHHHHHHhhCCCCCCHH-HHHH---HHHHHHc-------cCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHh
Q 047392          113 NKATEFYHWVERFFHFFHNEV-TCKE---MGIVFAR-------GNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGE  181 (258)
Q Consensus       113 ~~a~~~f~~m~~~~~~~p~~~-~y~~---li~~~~~-------~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~  181 (258)
                      ++|++++++....   .|+.. .|+.   ++..+..       .|.+++|..+++...+... -  +...|..+-.++..
T Consensus        46 ~~al~~~~~~l~~---~P~~~~a~~~r~~~l~~l~~~~~~~~~~~~~~~al~~~~~~l~~~p-k--~~~~~~~~~~~~~~  119 (334)
T d1dcea1          46 ESVLELTSQILGA---NPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP-K--SYGTWHHRCWLLSR  119 (334)
T ss_dssp             HHHHHHHHHHHHH---CTTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCT-T--CHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHH---CCCcHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhCC-C--cHHHHHHhhHHHHH
Confidence            4889999987643   26643 3432   3333333       3447889999999887642 2  55567777777766


Q ss_pred             cC--ChHHHHHHHHHHHhCCCCCCHHHHHHHH-HHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHHHcCCCC
Q 047392          182 EG--LVNEALATFYRMKQFRCRPDVYAYNVVI-NALCRVGNFNKARFLLEQMELPGFRCPPDVYTYTILISSYCKYGMQT  258 (258)
Q Consensus       182 ~g--~~~~a~~l~~~M~~~g~~p~~~ty~~li-~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~~~g~~~  258 (258)
                      .+  ++++|...++++.+.. +++...|...+ ..+-..|..++|...+++.....-   -|...|..+-..+.+.|+.+
T Consensus       120 ~~~~~~~~a~~~~~~al~~~-~~~~~~~~~~~~~~~~~~~~~~~Al~~~~~~i~~~p---~~~~a~~~l~~~~~~~~~~~  195 (334)
T d1dcea1         120 LPEPNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNF---SNYSSWHYRSCLLPQLHPQP  195 (334)
T ss_dssp             CSSCCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTC---CCHHHHHHHHHHHHHHSCCC
T ss_pred             hccccHHHHHHHHHHHHhhC-chhhhhhhhHHHHHHHhccccHHHHHHHHHHHHcCC---CCHHHHHHHHHHHHHhcCHH
Confidence            65  4889999999987742 34566665555 455568999999999999998762   35667888877788877653


No 40 
>d1zbpa1 e.61.1.1 (A:2-265) Hypothetical protein VPA1032 {Vibrio parahaemolyticus [TaxId: 670]}
Probab=94.19  E-value=0.028  Score=43.71  Aligned_cols=59  Identities=14%  Similarity=0.155  Sum_probs=49.4

Q ss_pred             HHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHH
Q 047392          142 FARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVY  205 (258)
Q Consensus       142 ~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~  205 (258)
                      ..+.|++++|.+.+++-.+..   .-|...+..+...|+..|++++|.+.|+...+.  .|+..
T Consensus         6 aL~~G~l~eAl~~l~~al~~~---P~d~~ar~~La~lL~~~G~~e~A~~~l~~a~~l--~P~~~   64 (264)
T d1zbpa1           6 ALSEGQLQQALELLIEAIKAS---PKDASLRSSFIELLCIDGDFERADEQLMQSIKL--FPEYL   64 (264)
T ss_dssp             HTTTTCHHHHHHHHHHHHHTC---TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CGGGH
T ss_pred             HHHCCCHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--CCCcH
Confidence            346799999999999998874   237778999999999999999999999999874  36543


No 41 
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=94.02  E-value=0.4  Score=33.62  Aligned_cols=76  Identities=13%  Similarity=0.053  Sum_probs=59.5

Q ss_pred             HHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC-CHHHHHHH
Q 047392          132 EVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRP-DVYAYNVV  210 (258)
Q Consensus       132 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p-~~~ty~~l  210 (258)
                      ...|..+-.++.+.|++++|...+++..+..  | -+...|..+-.+|.+.|++++|.+.|++..+.  .| |...+..+
T Consensus        77 ~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~--p-~~~~a~~~~g~~~~~l~~~~~A~~~~~~al~l--~p~n~~~~~~l  151 (169)
T d1ihga1          77 LSCVLNIGACKLKMSDWQGAVDSCLEALEID--P-SNTKALYRRAQGWQGLKEYDQALADLKKAQEI--APEDKAIQAEL  151 (169)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--T-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcccchhhhhhhhhhhhh--h-hhhhHHHhHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHH
Confidence            3456667788899999999999999998763  2 26778999999999999999999999999874  34 44444444


Q ss_pred             HH
Q 047392          211 IN  212 (258)
Q Consensus       211 i~  212 (258)
                      -.
T Consensus       152 ~~  153 (169)
T d1ihga1         152 LK  153 (169)
T ss_dssp             HH
T ss_pred             HH
Confidence            33


No 42 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=93.90  E-value=0.12  Score=35.83  Aligned_cols=113  Identities=13%  Similarity=0.014  Sum_probs=61.4

Q ss_pred             ccCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHcc----------CChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHH
Q 047392          109 TLGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARG----------NNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKV  178 (258)
Q Consensus       109 ~~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~----------g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~  178 (258)
                      ...+++|.+.|+.....  -+-+...|..+-.+|...          +.+++|.+.|++..+-.  | -+..+|..+=.+
T Consensus        10 ~~~fe~A~~~~e~al~~--~P~~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~--P-~~~~a~~~lG~~   84 (145)
T d1zu2a1          10 ILLFEQIRQDAENTYKS--NPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID--P-KKDEAVWCIGNA   84 (145)
T ss_dssp             HHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC--T-TCHHHHHHHHHH
T ss_pred             HccHHHHHHHHHHHHhh--CCcchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhc--c-hhhHHHhhHHHH
Confidence            34467777777776642  133444555555555433          33456777777766653  2 144466666666


Q ss_pred             HHhcCC-----------hHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCC
Q 047392          179 LGEEGL-----------VNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPG  234 (258)
Q Consensus       179 ~~~~g~-----------~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~  234 (258)
                      |...|+           +++|.+.|++..+  +.|+-..|..-+..+      ..|.+++.+..+.|
T Consensus        85 y~~~g~~~~~~~~~~~~~~~A~~~~~kal~--l~P~~~~~~~~L~~~------~ka~~~~~e~~k~~  143 (145)
T d1zu2a1          85 YTSFAFLTPDETEAKHNFDLATQFFQQAVD--EQPDNTHYLKSLEMT------AKAPQLHAEAYKQG  143 (145)
T ss_dssp             HHHHHHHCCCHHHHHHHHHHHHHHHHHHHH--HCTTCHHHHHHHHHH------HTHHHHHHHHHHSS
T ss_pred             HHHcccchhhHHHHHHhHHHhhhhhhcccc--cCCCHHHHHHHHHHH------HHHHHHHHHHHHHh
Confidence            655442           4556666655554  346655554444333      35556666655554


No 43 
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=93.80  E-value=0.21  Score=38.41  Aligned_cols=124  Identities=10%  Similarity=0.038  Sum_probs=84.5

Q ss_pred             HHHHHHHHHHccCChHHHHHHHHHHHHcCCC-CCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHh----CCCCCCH-HHH
Q 047392          134 TCKEMGIVFARGNNVKGLWDFLKEMSRRGNG-ELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQ----FRCRPDV-YAY  207 (258)
Q Consensus       134 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~-~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~----~g~~p~~-~ty  207 (258)
                      .+..+...+...|+.++|...+.+..+.... +......+..+-..|...|++++|.+.+++...    .+..|+. .+|
T Consensus       215 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~  294 (366)
T d1hz4a_         215 ANKVRVIYWQMTGDKAAAANWLRHTAKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNL  294 (366)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHSCCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred             HHHHHHHHHHhcccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhcccChHHHHHH
Confidence            4556667788899999999998876544221 223445677788899999999999999998753    3554543 456


Q ss_pred             HHHHHHHHHcCCHHHHHHHHHHhHh----CCCC--CCCCHHHHHHHHHHHHHcCCC
Q 047392          208 NVVINALCRVGNFNKARFLLEQMEL----PGFR--CPPDVYTYTILISSYCKYGMQ  257 (258)
Q Consensus       208 ~~li~~~~~~g~~~~a~~~f~~M~~----~~~~--~~pd~~ty~~li~~~~~~g~~  257 (258)
                      ..+-..|.+.|+.++|.+.|++-..    .|..  +.-.......++..+.+.|++
T Consensus       295 ~~la~~~~~~g~~~~A~~~l~~Al~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l  350 (366)
T d1hz4a_         295 LLLNQLYWQAGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTL  350 (366)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCCCHHHHTTHHHHHHHHHHHHHTTCS
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence            7777889999999999999988643    2321  001123445555666655544


No 44 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.50  E-value=0.37  Score=30.38  Aligned_cols=60  Identities=13%  Similarity=0.097  Sum_probs=28.5

Q ss_pred             HHHHHHccCChHHHHHHHHHHHHcC---CCCCcC-HHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 047392          138 MGIVFARGNNVKGLWDFLKEMSRRG---NGELVT-TSTVTCLIKVLGEEGLVNEALATFYRMKQ  197 (258)
Q Consensus       138 li~~~~~~g~~~~a~~~~~~m~~~g---~~~~~~-~~t~~~li~~~~~~g~~~~a~~l~~~M~~  197 (258)
                      +-..+.+.|++++|...|++-.+..   ..+.++ ..+++.|-.+|.+.|++++|++.+++..+
T Consensus        11 lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~   74 (95)
T d1tjca_          11 LGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE   74 (95)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHH
Confidence            4444555555555555555543321   111111 23455555555555555555555555544


No 45 
>d1zu2a1 a.118.8.1 (A:1-145) Mitochondrial import receptor subunit tom20-3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=93.28  E-value=0.63  Score=31.87  Aligned_cols=96  Identities=17%  Similarity=0.098  Sum_probs=66.1

Q ss_pred             HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHH----------hcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcC
Q 047392          149 KGLWDFLKEMSRRGNGELVTTSTVTCLIKVLG----------EEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVG  218 (258)
Q Consensus       149 ~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~----------~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g  218 (258)
                      ++|.+.|+.-.+.. +-  +...+..+=.+|.          ..+.+++|++.|++..+.. +-+..+|+.+=..|...|
T Consensus        14 e~A~~~~e~al~~~-P~--~~~~~~~~g~~l~~~~~~~~~~e~~~~~~~Ai~~~~kAl~l~-P~~~~a~~~lG~~y~~~g   89 (145)
T d1zu2a1          14 EQIRQDAENTYKSN-PL--DADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLID-PKKDEAVWCIGNAYTSFA   89 (145)
T ss_dssp             HHHHHHHHHHHHHC-TT--CHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhC-Cc--chHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHhc-chhhHHHhhHHHHHHHcc
Confidence            67778888877763 22  4445555555554          4578899999999988643 346677777766666544


Q ss_pred             -----------CHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHH
Q 047392          219 -----------NFNKARFLLEQMELPGFRCPPDVYTYTILISSYC  252 (258)
Q Consensus       219 -----------~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~  252 (258)
                                 .+++|.+.|++...    +.|+-.+|..-+..+-
T Consensus        90 ~~~~~~~~~~~~~~~A~~~~~kal~----l~P~~~~~~~~L~~~~  130 (145)
T d1zu2a1          90 FLTPDETEAKHNFDLATQFFQQAVD----EQPDNTHYLKSLEMTA  130 (145)
T ss_dssp             HHCCCHHHHHHHHHHHHHHHHHHHH----HCTTCHHHHHHHHHHH
T ss_pred             cchhhHHHHHHhHHHhhhhhhcccc----cCCCHHHHHHHHHHHH
Confidence                       35788899998887    4488888877776554


No 46 
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=93.27  E-value=0.36  Score=33.43  Aligned_cols=86  Identities=12%  Similarity=0.006  Sum_probs=60.4

Q ss_pred             HHHHHHHHHHHHhhCCCCCC----------HHHHHHHHHHHHccCChHHHHHHHHHHHHc---CCCCCcC-----HHHHH
Q 047392          112 INKATEFYHWVERFFHFFHN----------EVTCKEMGIVFARGNNVKGLWDFLKEMSRR---GNGELVT-----TSTVT  173 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~----------~~~y~~li~~~~~~g~~~~a~~~~~~m~~~---g~~~~~~-----~~t~~  173 (258)
                      +++|++.|++..+-..-.|+          ..+|+.+-.+|.+.|++++|.+-+++..+-   .....++     ...|+
T Consensus        25 y~~Ai~~y~~Al~i~~~~~~~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~a~~  104 (156)
T d2hr2a1          25 YDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEGKLWISAVY  104 (156)
T ss_dssp             HHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhChhhhhhhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhcccccccccccccchhHHHHh
Confidence            56788888776532111122          467888999999999999999998887642   1111111     22467


Q ss_pred             HHHHHHHhcCChHHHHHHHHHHHh
Q 047392          174 CLIKVLGEEGLVNEALATFYRMKQ  197 (258)
Q Consensus       174 ~li~~~~~~g~~~~a~~l~~~M~~  197 (258)
                      .+=.+|...|++++|.+.|++..+
T Consensus       105 ~~g~~~~~lg~~eeA~~~~~~Al~  128 (156)
T d2hr2a1         105 SRALALDGLGRGAEAMPEFKKVVE  128 (156)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHHH
Confidence            778899999999999999998653


No 47 
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.36  E-value=0.7  Score=28.96  Aligned_cols=64  Identities=19%  Similarity=0.091  Sum_probs=49.1

Q ss_pred             HHHHHHHhcCChHHHHHHHHHHHhC-----CCCCC-HHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCCH
Q 047392          174 CLIKVLGEEGLVNEALATFYRMKQF-----RCRPD-VYAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPDV  241 (258)
Q Consensus       174 ~li~~~~~~g~~~~a~~l~~~M~~~-----g~~p~-~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~  241 (258)
                      -+=..+.+.|++++|...|++-.+.     ...++ ..+++.|=.++.+.|++++|...|++..+..    |+-
T Consensus        10 ~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~----P~~   79 (95)
T d1tjca_          10 ELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD----PEH   79 (95)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC----TTC
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhC----cCC
Confidence            3445678899999999999886531     12233 5678889999999999999999999998743    764


No 48 
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=91.49  E-value=2.6  Score=33.28  Aligned_cols=115  Identities=16%  Similarity=0.074  Sum_probs=56.0

Q ss_pred             HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHH
Q 047392          114 KATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFY  193 (258)
Q Consensus       114 ~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~  193 (258)
                      .|..+|..+.+          |..++..+.+.++++.|.+++...   +     +..+|..+...+.......-|     
T Consensus        32 ~A~~lY~~~~d----------~~rl~~~~v~l~~~~~avd~~~k~---~-----~~~~~k~~~~~l~~~~e~~la-----   88 (336)
T d1b89a_          32 AAKLLYNNVSN----------FGRLASTLVHLGEYQAAVDGARKA---N-----STRTWKEVCFACVDGKEFRLA-----   88 (336)
T ss_dssp             THHHHHHHTTC----------HHHHHHHHHTTTCHHHHHHHHHHH---T-----CHHHHHHHHHHHHHTTCHHHH-----
T ss_pred             HHHHHHHhCCC----------HHHHHHHHHhhccHHHHHHHHHHc---C-----CHHHHHHHHHHHHhCcHHHHH-----
Confidence            55566655542          455666666666666665555432   1     333455555555554444332     


Q ss_pred             HHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHHHc
Q 047392          194 RMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPDVYTYTILISSYCKY  254 (258)
Q Consensus       194 ~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~~~  254 (258)
                      .+...+...+......++..|-..|..++...+++......   .++...++-++..|++.
T Consensus        89 ~i~~~~~~~~~d~l~~~v~~ye~~~~~e~Li~~Le~~~~~~---~~~~~~~~~L~~lyak~  146 (336)
T d1b89a_          89 QMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLE---RAHMGMFTELAILYSKF  146 (336)
T ss_dssp             HHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTST---TCCHHHHHHHHHHHHTT
T ss_pred             HHHHHHhhcCHHHHHHHHHHHHHcCChHHHHHHHHHHHcCC---ccchHHHHHHHHHHHHh
Confidence            11122223344444455555555555555555555443221   14444555555555543


No 49 
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=90.82  E-value=1  Score=28.82  Aligned_cols=46  Identities=17%  Similarity=0.219  Sum_probs=22.1

Q ss_pred             HHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHh
Q 047392          187 EALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMEL  232 (258)
Q Consensus       187 ~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~  232 (258)
                      ++.+-++.+-...+.|++....+.+.+|=|.+++..|.++|+-.+.
T Consensus        24 e~rrgmN~l~~~DlVPeP~Ii~aALrAcRRvND~alAVR~lE~vK~   69 (105)
T d1v54e_          24 ELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKD   69 (105)
T ss_dssp             HHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence            3444444444444445555555555555555555555555544443


No 50 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=90.10  E-value=0.72  Score=38.54  Aligned_cols=115  Identities=13%  Similarity=0.065  Sum_probs=66.4

Q ss_pred             HHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 047392          132 EVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVI  211 (258)
Q Consensus       132 ~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li  211 (258)
                      ...+..+-..+.+.|+.++|...+..-....     ...++..|=+.+...|++++|...|++-.+.. +-+...|+.|=
T Consensus       120 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-----~~~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~-P~~~~~~~~Lg  193 (497)
T d1ya0a1         120 RVKSSQLGIISNKQTHTSAIVKPQSSSCSYI-----CQHCLVHLGDIARYRNQTSQAESYYRHAAQLV-PSNGQPYNQLA  193 (497)
T ss_dssp             -----------------------CCHHHHHH-----HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTBSHHHHHHH
T ss_pred             HHHHHHhHHHHHhCCCHHHHHHHHHHHhCCC-----HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCchHHHHHHH
Confidence            4445556666677777777776665543321     12356667777888899999999998877642 23447888888


Q ss_pred             HHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHHHcC
Q 047392          212 NALCRVGNFNKARFLLEQMELPGFRCPPDVYTYTILISSYCKYG  255 (258)
Q Consensus       212 ~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~~~g  255 (258)
                      ..+...|+..+|...|.+-.....   |-..++..|...|.+..
T Consensus       194 ~~~~~~~~~~~A~~~y~ral~~~~---~~~~a~~nL~~~~~~~~  234 (497)
T d1ya0a1         194 ILASSKGDHLTTIFYYCRSIAVKF---PFPAASTNLQKALSKAL  234 (497)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHSSSB---CCHHHHHHHHHHHHHHT
T ss_pred             HHHHHcCCHHHHHHHHHHHHhCCC---CCHHHHHHHHHHHHHhh
Confidence            888889999999999888887542   66777888887776543


No 51 
>d1dcea1 a.118.6.1 (A:1-241,A:351-443) Rab geranylgeranyltransferase alpha-subunit, N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=89.58  E-value=1.8  Score=33.44  Aligned_cols=109  Identities=7%  Similarity=-0.106  Sum_probs=76.6

Q ss_pred             ccCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCC--hHHHHHHHHHHHHcCCCCCcCHHHHHHHH-HHHHhcCCh
Q 047392          109 TLGINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNN--VKGLWDFLKEMSRRGNGELVTTSTVTCLI-KVLGEEGLV  185 (258)
Q Consensus       109 ~~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~--~~~a~~~~~~m~~~g~~~~~~~~t~~~li-~~~~~~g~~  185 (258)
                      ....++|+.+|+...+.  -+.+...|..+..++...++  .++|...+.+..+... .  +...+..++ ..+-..|+.
T Consensus        86 ~~~~~~al~~~~~~l~~--~pk~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~-~--~~~~~~~~~~~~~~~~~~~  160 (334)
T d1dcea1          86 AALVKAELGFLESCLRV--NPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADE-R--NFHCWDYRRFVAAQAAVAP  160 (334)
T ss_dssp             HHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCT-T--CHHHHHHHHHHHHHTCCCH
T ss_pred             HHHHHHHHHHHHHHHHh--CCCcHHHHHHhhHHHHHhccccHHHHHHHHHHHHhhCc-h--hhhhhhhHHHHHHHhcccc
Confidence            33367889999987643  23456667777667766654  7889999999887632 2  444555444 566778999


Q ss_pred             HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHH
Q 047392          186 NEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKA  223 (258)
Q Consensus       186 ~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a  223 (258)
                      ++|+..+++..+.. +-+...|+.+-..+.+.|+.++|
T Consensus       161 ~~Al~~~~~~i~~~-p~~~~a~~~l~~~~~~~~~~~~A  197 (334)
T d1dcea1         161 AEELAFTDSLITRN-FSNYSSWHYRSCLLPQLHPQPDS  197 (334)
T ss_dssp             HHHHHHHHTTTTTT-CCCHHHHHHHHHHHHHHSCCCCS
T ss_pred             HHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhcCHHHH
Confidence            99999999887754 34677788877777787776554


No 52 
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=88.78  E-value=1.7  Score=29.38  Aligned_cols=64  Identities=20%  Similarity=0.113  Sum_probs=43.3

Q ss_pred             HHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCC
Q 047392          171 TVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPGF  235 (258)
Q Consensus       171 t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~  235 (258)
                      -++--++...+.|+-|+-.+++.+..+.+ +|++...-.+-.+|.+.|+..++-+++.+-.++|+
T Consensus        88 ~vdlALd~lv~~~kkd~Ld~i~~~l~kn~-~i~~~~llkia~A~kkig~~re~nell~~ACe~G~  151 (161)
T d1wy6a1          88 HVNKALDILVIQGKRDKLEEIGREILKNN-EVSASILVAIANALRRVGDERDATTLLIEACKKGE  151 (161)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHC--C-CSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHhccHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhH
Confidence            45566677777777777777777755533 56666666677777777777777777777777764


No 53 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=86.77  E-value=2.3  Score=28.35  Aligned_cols=48  Identities=4%  Similarity=0.002  Sum_probs=27.5

Q ss_pred             ChHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHHHcCCHHHHHHHHHHhHh
Q 047392          184 LVNEALATFYRMKQFRCRPDV-YAYNVVINALCRVGNFNKARFLLEQMEL  232 (258)
Q Consensus       184 ~~~~a~~l~~~M~~~g~~p~~-~ty~~li~~~~~~g~~~~a~~~f~~M~~  232 (258)
                      ++++|+.+|++....+ +.+. .++-.|=-+|.+.|+.++|.+.++...+
T Consensus        53 d~~~gI~lLe~~~~~~-p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~  101 (124)
T d2pqrb1          53 DERLGVKILTDIYKEA-ESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFE  101 (124)
T ss_dssp             HHHHHHHHHHHHHHHC-GGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence            3556677776665432 1122 3434444556677777777777777766


No 54 
>d1v54e_ a.118.11.1 (E:) Cytochrome c oxidase subunit E {Cow (Bos taurus) [TaxId: 9913]}
Probab=80.51  E-value=3  Score=26.53  Aligned_cols=44  Identities=7%  Similarity=-0.016  Sum_probs=22.5

Q ss_pred             HHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 047392          151 LWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMK  196 (258)
Q Consensus       151 a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~  196 (258)
                      +.+-++.+-.....|  +..+..+-+.+|-|..++.-|.++|+-.+
T Consensus        25 ~rrgmN~l~~~DlVP--eP~Ii~aALrAcRRvND~alAVR~lE~vK   68 (105)
T d1v54e_          25 LRKGMNTLVGYDLVP--EPKIIDAALRACRRLNDFASAVRILEVVK   68 (105)
T ss_dssp             HHHHHHHHTTSSBCC--CHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccccCC--CcHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence            333344443333333  44455566666666666666666665555


No 55 
>d1b89a_ a.118.1.3 (A:) Clathrin heavy chain proximal leg segment {Cow (Bos taurus) [TaxId: 9913]}
Probab=80.21  E-value=10  Score=29.66  Aligned_cols=103  Identities=17%  Similarity=0.050  Sum_probs=62.9

Q ss_pred             CCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHH
Q 047392          130 HNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNV  209 (258)
Q Consensus       130 p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~  209 (258)
                      ||..--..+..-|-+.|.++.|..+|..+.        |   |.-++.+|.+.++++.|.+++.+.      -+..+|..
T Consensus        12 ~n~~d~~~i~~~c~~~~lye~A~~lY~~~~--------d---~~rl~~~~v~l~~~~~avd~~~k~------~~~~~~k~   74 (336)
T d1b89a_          12 PNNAHIQQVGDRCYDEKMYDAAKLLYNNVS--------N---FGRLASTLVHLGEYQAAVDGARKA------NSTRTWKE   74 (336)
T ss_dssp             C----------------CTTTHHHHHHHTT--------C---HHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHH
T ss_pred             CCcCCHHHHHHHHHHCCCHHHHHHHHHhCC--------C---HHHHHHHHHhhccHHHHHHHHHHc------CCHHHHHH
Confidence            555545566777889999999999998652        5   899999999999999999988766      26779999


Q ss_pred             HHHHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHHHcCC
Q 047392          210 VINALCRVGNFNKARFLLEQMELPGFRCPPDVYTYTILISSYCKYGM  256 (258)
Q Consensus       210 li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~~~g~  256 (258)
                      +...|.+.....-|     .+...+..  .+......++..|-..|.
T Consensus        75 ~~~~l~~~~e~~la-----~i~~~~~~--~~~d~l~~~v~~ye~~~~  114 (336)
T d1b89a_          75 VCFACVDGKEFRLA-----QMCGLHIV--VHADELEELINYYQDRGY  114 (336)
T ss_dssp             HHHHHHHTTCHHHH-----HHTTTTTT--TCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhCcHHHHH-----HHHHHHhh--cCHHHHHHHHHHHHHcCC
Confidence            99998887765443     22222322  444455566666665554


No 56 
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=77.70  E-value=7.1  Score=25.49  Aligned_cols=111  Identities=13%  Similarity=0.082  Sum_probs=74.6

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHh----cCChH
Q 047392          111 GINKATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGE----EGLVN  186 (258)
Q Consensus       111 ~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~----~g~~~  186 (258)
                      +.++|++.|++..+. |..   ..+..|.  .....+.++|.+.+++-.+.|     +......|=..|..    ..+.+
T Consensus         8 d~~~A~~~~~kaa~~-g~~---~a~~~l~--~~~~~~~~~a~~~~~~aa~~g-----~~~a~~~Lg~~y~~g~~~~~d~~   76 (133)
T d1klxa_           8 DLKKAIQYYVKACEL-NEM---FGCLSLV--SNSQINKQKLFQYLSKACELN-----SGNGCRFLGDFYENGKYVKKDLR   76 (133)
T ss_dssp             HHHHHHHHHHHHHHT-TCT---THHHHHH--TCTTSCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHCSSSCCCHH
T ss_pred             CHHHHHHHHHHHHHC-CCh---hhhhhhc--cccccCHHHHHHHHhhhhccc-----chhhhhhHHHhhhhccccchhhH
Confidence            467899999988743 422   2233332  234467889999999988887     44444555444543    46789


Q ss_pred             HHHHHHHHHHhCCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHhHhCCC
Q 047392          187 EALATFYRMKQFRCRPDVYAYNVVINALCR----VGNFNKARFLLEQMELPGF  235 (258)
Q Consensus       187 ~a~~l~~~M~~~g~~p~~~ty~~li~~~~~----~g~~~~a~~~f~~M~~~~~  235 (258)
                      +|.+.|++--+.|.   +.....|=..|.+    ..+.++|.++|++-.+.|.
T Consensus        77 ~A~~~~~~aa~~g~---~~a~~~Lg~~y~~G~gv~~d~~~A~~~~~~Aa~~G~  126 (133)
T d1klxa_          77 KAAQYYSKACGLND---QDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS  126 (133)
T ss_dssp             HHHHHHHHHHHTTC---HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHhhhhccCc---chHHHHHHHHHHcCCccCCCHHHHHHHHHHHHHCCC
Confidence            99999999988773   4444444344444    4589999999999888774


No 57 
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.42  E-value=14  Score=30.09  Aligned_cols=79  Identities=11%  Similarity=0.045  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 047392          134 TCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINA  213 (258)
Q Consensus       134 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~  213 (258)
                      ++..+-..+...|++++|...|.+-.+..  |. +...|+.|=..|...|+..+|..-|.+-.... .|-..+++.|...
T Consensus       154 ~~~~LG~l~~~~~~~~~A~~~y~~A~~l~--P~-~~~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~-~~~~~a~~nL~~~  229 (497)
T d1ya0a1         154 CLVHLGDIARYRNQTSQAESYYRHAAQLV--PS-NGQPYNQLAILASSKGDHLTTIFYYCRSIAVK-FPFPAASTNLQKA  229 (497)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT-BSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSS-BCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccHHHHHHHHHHHHHHC--CC-chHHHHHHHHHHHHcCCHHHHHHHHHHHHhCC-CCCHHHHHHHHHH
Confidence            45556677888899999999999987763  21 44579999999999999999998888876643 3556666666655


Q ss_pred             HHH
Q 047392          214 LCR  216 (258)
Q Consensus       214 ~~~  216 (258)
                      |.+
T Consensus       230 ~~~  232 (497)
T d1ya0a1         230 LSK  232 (497)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            554


No 58 
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=71.82  E-value=6.9  Score=22.63  Aligned_cols=16  Identities=6%  Similarity=-0.201  Sum_probs=7.4

Q ss_pred             ChHHHHHHHHHHHhCC
Q 047392          184 LVNEALATFYRMKQFR  199 (258)
Q Consensus       184 ~~~~a~~l~~~M~~~g  199 (258)
                      ..++.....+-|.+++
T Consensus        50 t~dEi~g~~~am~~~~   65 (69)
T d1khda1          50 RPEEIAGAASALLADA   65 (69)
T ss_dssp             CHHHHHHHHHHHHHTS
T ss_pred             CHHHHHHHHHHHHHhC
Confidence            4444444444444443


No 59 
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=70.63  E-value=9.1  Score=25.29  Aligned_cols=65  Identities=11%  Similarity=0.014  Sum_probs=46.8

Q ss_pred             HHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChH--HHHHHHHHHHhCCCCC
Q 047392          135 CKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVN--EALATFYRMKQFRCRP  202 (258)
Q Consensus       135 y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~--~a~~l~~~M~~~g~~p  202 (258)
                      .+.+|.-|...|+.++|...++++....+   -..+++..+..++=+.++-.  .+.+++..+...|+-+
T Consensus        10 ~~~ll~EY~~~~D~~Ea~~~l~eL~~p~~---~~e~V~~~i~~ale~~~~~r~~~~~~Ll~~L~~~~~is   76 (129)
T d2nsza1          10 IDMLLKEYLLSGDISEAEHCLKELEVPHF---HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTIT   76 (129)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHTCGGG---HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSC
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHcCCchh---hHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHCCCCC
Confidence            57889999999999999999999853322   14556777777776666543  3577888888876433


No 60 
>d2nsza1 a.118.1.14 (A:322-450) Programmed cell death 4, PDCD4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=69.00  E-value=12  Score=24.65  Aligned_cols=25  Identities=20%  Similarity=0.216  Sum_probs=14.1

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHH
Q 047392          172 VTCLIKVLGEEGLVNEALATFYRMK  196 (258)
Q Consensus       172 ~~~li~~~~~~g~~~~a~~l~~~M~  196 (258)
                      ...+|+-|...|+.++|.+-++++.
T Consensus        10 ~~~ll~EY~~~~D~~Ea~~~l~eL~   34 (129)
T d2nsza1          10 IDMLLKEYLLSGDISEAEHCLKELE   34 (129)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHcC
Confidence            3455555555555555555555554


No 61 
>d1u9pa1 a.43.1.1 (A:72-107) Arc repressor {Salmonella bacteriophage P22 [TaxId: 10754]}
Probab=67.07  E-value=3.7  Score=19.84  Aligned_cols=32  Identities=9%  Similarity=-0.067  Sum_probs=18.0

Q ss_pred             HHHHHHHHhhCCCCCCHHHHHHHHHHHHccCC
Q 047392          116 TEFYHWVERFFHFFHNEVTCKEMGIVFARGNN  147 (258)
Q Consensus       116 ~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~  147 (258)
                      +++..+..++.|...|...|..++..+-+.|+
T Consensus         4 ldlvrkvaeeng~s~ns~iy~~vmes~kkegr   35 (36)
T d1u9pa1           4 LDLVRKVAEENGRSVNSEIYQRVMESFKKEGR   35 (36)
T ss_dssp             HHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHcCcchhHHHHHHHHHHHHHccC
Confidence            44444444444555666666666666665554


No 62 
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=64.68  E-value=10  Score=21.83  Aligned_cols=64  Identities=11%  Similarity=-0.065  Sum_probs=46.0

Q ss_pred             HHHHHHHHHHhcCC--hHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHhHhCCC
Q 047392          171 TVTCLIKVLGEEGL--VNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQMELPGF  235 (258)
Q Consensus       171 t~~~li~~~~~~g~--~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~  235 (258)
                      ||..+|......++  .+++..+++.+.... .+|...=..|+....+.-..++...+.+-|.+.+.
T Consensus         1 t~~~il~kl~~g~~Ls~ee~~~~~~~i~~g~-~~d~qiaafL~al~~kg~t~dEi~g~~~am~~~~~   66 (69)
T d1khda1           1 THQPILEKLFKSQSMTQEESHQLFAAIVRGE-LEDSQLAAALISMKMRGERPEEIAGAASALLADAQ   66 (69)
T ss_dssp             CCHHHHHHHHTTCCCCHHHHHHHHHHHTTTC-SCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSC
T ss_pred             CHHHHHHHHHcCCCCCHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhCC
Confidence            46778888877665  678888998887643 35555555555555566668888889999988875


No 63 
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=61.22  E-value=8.6  Score=22.08  Aligned_cols=48  Identities=10%  Similarity=0.100  Sum_probs=33.7

Q ss_pred             HHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCC
Q 047392          171 TVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGN  219 (258)
Q Consensus       171 t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~  219 (258)
                      .+|-|++++++.--+++++..+++....|. .+..+|---+..+++..-
T Consensus         3 a~nQl~~l~Aed~AieDaiy~L~~aL~~G~-I~~d~ylK~vR~LaReQF   50 (64)
T d2f6ma1           3 GLNQLYNLVAQDYALTDTIEALSRMLHRGT-IPLDTFVKQGRELARQQF   50 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTS-SCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-cCHHHHHHHHHHHHHHHH
Confidence            367777777777777777777777777773 557777777777666543


No 64 
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=60.25  E-value=18  Score=23.72  Aligned_cols=34  Identities=6%  Similarity=0.002  Sum_probs=15.0

Q ss_pred             HHHHHHHHhcC-ChHHHHHHHHHHHhCCCCCCHHH
Q 047392          173 TCLIKVLGEEG-LVNEALATFYRMKQFRCRPDVYA  206 (258)
Q Consensus       173 ~~li~~~~~~g-~~~~a~~l~~~M~~~g~~p~~~t  206 (258)
                      ..++..+...+ ..-.|.+|++.+++.|...+..|
T Consensus        19 ~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~i~~aT   53 (134)
T d1mzba_          19 VKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLAT   53 (134)
T ss_dssp             HHHHHHHHCC-CCSBCHHHHHHHHHHTTCCCCHHH
T ss_pred             HHHHHHHHhCCCCCCCHHHHHHHHHHhCCCccHHH
Confidence            34444444332 23444555555555444444443


No 65 
>d1wy6a1 a.118.20.1 (A:7-167) Hypothetical protein ST1625 {Archaeon Sulfolobus tokodaii [TaxId: 111955]}
Probab=57.57  E-value=23  Score=23.59  Aligned_cols=62  Identities=10%  Similarity=0.039  Sum_probs=40.4

Q ss_pred             HHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCC
Q 047392          136 KEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRC  200 (258)
Q Consensus       136 ~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~  200 (258)
                      +..++.+.++|+-++-.++++++.+.+ ++  +....-.+-.+|.+-|...++.+++.+.-+.|+
T Consensus        90 dlALd~lv~~~kkd~Ld~i~~~l~kn~-~i--~~~~llkia~A~kkig~~re~nell~~ACe~G~  151 (161)
T d1wy6a1          90 NKALDILVIQGKRDKLEEIGREILKNN-EV--SASILVAIANALRRVGDERDATTLLIEACKKGE  151 (161)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHHHC--C-CS--CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHhcC-CC--CHHHHHHHHHHHHHhcchhhHHHHHHHHHHHhH
Confidence            344566677777777777777765543 22  444566677777888888888777777766664


No 66 
>d2f6ma1 a.2.17.1 (A:322-385) Vacuolar protein sorting-associated protein 23, VPS23 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=54.69  E-value=9.4  Score=21.91  Aligned_cols=44  Identities=16%  Similarity=0.164  Sum_probs=21.5

Q ss_pred             HHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHh
Q 047392          135 CKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGE  181 (258)
Q Consensus       135 y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~  181 (258)
                      +|-|+..+++..-++.+...+++..++|.   .+..+|--.+..+++
T Consensus         4 ~nQl~~l~Aed~AieDaiy~L~~aL~~G~---I~~d~ylK~vR~LaR   47 (64)
T d2f6ma1           4 LNQLYNLVAQDYALTDTIEALSRMLHRGT---IPLDTFVKQGRELAR   47 (64)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHTS---SCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHcCC---cCHHHHHHHHHHHHH
Confidence            44555555555555555555555555552   233344444444444


No 67 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=46.56  E-value=45  Score=23.68  Aligned_cols=127  Identities=15%  Similarity=0.147  Sum_probs=71.8

Q ss_pred             cCHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHc----cCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHh----
Q 047392          110 LGINKATEFYHWVERFFHFFHNEVTCKEMGIVFAR----GNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGE----  181 (258)
Q Consensus       110 ~~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~----  181 (258)
                      .+.++|++.|++..+. |   +...+-.|=..|..    ..+...|...+..-.+.+     +......|-..+..    
T Consensus        16 ~d~~~A~~~~~kAa~~-g---~~~A~~~Lg~~y~~G~~~~~d~~~a~~~~~~a~~~~-----~~~a~~~l~~~~~~~~~~   86 (265)
T d1ouva_          16 KDFTQAKKYFEKACDL-K---ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-----YSNGCHLLGNLYYSGQGV   86 (265)
T ss_dssp             TCHHHHHHHHHHHHHT-T---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTSSS
T ss_pred             CCHHHHHHHHHHHHHC-C---CHHHHHHHHHHHHcCCCcchhHHHHHHhhccccccc-----ccchhhcccccccccccc
Confidence            4578888888887643 4   44444444444443    456777888887777765     22234444444333    


Q ss_pred             cCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHHH
Q 047392          182 EGLVNEALATFYRMKQFRCRPDVYAYNVVINALCR----VGNFNKARFLLEQMELPGFRCPPDVYTYTILISSYCK  253 (258)
Q Consensus       182 ~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~----~g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~~  253 (258)
                      .++.+.|...++.-.+.|..   .....+-..+..    ......+...+.+....     .+...+..|-..|..
T Consensus        87 ~~~~~~a~~~~~~a~~~g~~---~a~~~l~~~~~~~~~~~~~~~~a~~~~~~~~~~-----~~~~~~~~L~~~~~~  154 (265)
T d1ouva_          87 SQNTNKALQYYSKACDLKYA---EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL-----NDGDGCTILGSLYDA  154 (265)
T ss_dssp             CCCHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT-----TCHHHHHHHHHHHHH
T ss_pred             chhhHHHHHHHhhhhhhhhh---hHHHhhcccccCCCcccchhHHHHHHhhhhhcc-----cccchhhhhhhhhcc
Confidence            45677888888887776532   222222222222    34566777777776654     344555555555544


No 68 
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=46.33  E-value=21  Score=19.94  Aligned_cols=50  Identities=10%  Similarity=0.203  Sum_probs=23.8

Q ss_pred             CChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC
Q 047392          146 NNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRP  202 (258)
Q Consensus       146 g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p  202 (258)
                      +..++..+.+.+|    + |..|..+..+++.  +..|+++.|...+=+|-.....|
T Consensus         7 ~~~Ee~i~~LkeM----F-P~~D~~vI~~VL~--a~~G~vd~aid~LL~Msd~~~gp   56 (59)
T d1wgla_           7 GCSEEDLKAIQDM----F-PNMDQEVIRSVLE--AQRGNKDAAINSLLQMGEEPSGP   56 (59)
T ss_dssp             SSCHHHHHHHHHH----C-SSSCHHHHHHHHT--TTTTCHHHHHHHHHHSSCCCCSC
T ss_pred             cCcHHHHHHHHHH----C-CCCCHHHHHHHHH--HcCCCHHHHHHHHHhcCCCCcCC
Confidence            3344444444444    2 3445434433333  24456666666666665444333


No 69 
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=42.18  E-value=31  Score=20.64  Aligned_cols=38  Identities=8%  Similarity=0.143  Sum_probs=20.2

Q ss_pred             ccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCC
Q 047392          144 RGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGL  184 (258)
Q Consensus       144 ~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~  184 (258)
                      +.|++++|.+..+++.+.|+... |  ..+.|........+
T Consensus        14 ~~~~f~~a~~~i~~l~~~Gys~~-d--Il~~l~~~vv~~~~   51 (91)
T d1sxjd1          14 KSGDFDEIKKYVNTFMKSGWSAA-S--VVNQLHEYYITNDN   51 (91)
T ss_dssp             HSCCHHHHHHHHHHHHHTSCCCT-T--HHHHHHHHHHHCSS
T ss_pred             HcCCHHHHHHHHHHHHHcCCCHH-H--HHHHHHHHHHhcCC
Confidence            35666666666666666665431 2  34444444444443


No 70 
>d1ouva_ a.118.18.1 (A:) Cysteine rich protein C (HcpC) {Helicobacter pylori [TaxId: 210]}
Probab=42.04  E-value=53  Score=23.24  Aligned_cols=110  Identities=12%  Similarity=0.065  Sum_probs=63.9

Q ss_pred             HHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHc----cCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHh----cCC
Q 047392          113 NKATEFYHWVERFFHFFHNEVTCKEMGIVFAR----GNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGE----EGL  184 (258)
Q Consensus       113 ~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~----~g~  184 (258)
                      ..|...+......    .+...+..|-..+..    ..+...+...++.-.+.|     +......|=..|..    ..+
T Consensus       127 ~~a~~~~~~~~~~----~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~a~~~g-----~~~A~~~lg~~y~~g~~~~~d  197 (265)
T d1ouva_         127 KKAVEYFTKACDL----NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK-----DSPGCFNAGNMYHHGEGATKN  197 (265)
T ss_dssp             HHHHHHHHHHHHT----TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTCSSCCC
T ss_pred             HHHHHHhhhhhcc----cccchhhhhhhhhccCCCcccccccchhhhhcccccc-----ccccccchhhhcccCcccccc
Confidence            3555555554432    445556666666654    344556666676666665     33333333333333    467


Q ss_pred             hHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH----cCCHHHHHHHHHHhHhCC
Q 047392          185 VNEALATFYRMKQFRCRPDVYAYNVVINALCR----VGNFNKARFLLEQMELPG  234 (258)
Q Consensus       185 ~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~----~g~~~~a~~~f~~M~~~~  234 (258)
                      .++|...|.+-.+.|   ++..+..|=..|-+    ..+.++|.++|++-...|
T Consensus       198 ~~~A~~~~~~aa~~g---~~~a~~~LG~~y~~G~g~~~n~~~A~~~~~kAa~~g  248 (265)
T d1ouva_         198 FKEALARYSKACELE---NGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG  248 (265)
T ss_dssp             HHHHHHHHHHHHHTT---CHHHHHHHHHHHHTTSSSSCCSTTHHHHHHHHHHHT
T ss_pred             hhhhhhhHhhhhccc---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHCc
Confidence            888888888877766   34444444444443    236778888888877766


No 71 
>d1mzba_ a.4.5.42 (A:) Ferric uptake regulation protein, FUR {Pseudomonas aeruginosa [TaxId: 287]}
Probab=40.77  E-value=39  Score=21.86  Aligned_cols=60  Identities=8%  Similarity=0.077  Sum_probs=44.4

Q ss_pred             HHHhCCCCCCHHHHHHHHHHHHHc-CCHHHHHHHHHHhHhCCCCCCCCHHHHHHHHHHHHHcCC
Q 047392          194 RMKQFRCRPDVYAYNVVINALCRV-GNFNKARFLLEQMELPGFRCPPDVYTYTILISSYCKYGM  256 (258)
Q Consensus       194 ~M~~~g~~p~~~ty~~li~~~~~~-g~~~~a~~~f~~M~~~~~~~~pd~~ty~~li~~~~~~g~  256 (258)
                      ++++.|++++..= ..++..+.+. +..-.|.++++.+.+.+..  .+..|-=--|..+...|-
T Consensus         6 ~Lr~~GlR~T~qR-~~Il~~L~~~~~~h~sa~ei~~~l~~~~~~--i~~aTVYR~L~~l~e~gl   66 (134)
T d1mzba_           6 ELRKAGLKVTLPR-VKILQMLDSAEQRHMSAEDVYKALMEAGED--VGLATVYRVLTQFEAAGL   66 (134)
T ss_dssp             HHHHTTCCCCHHH-HHHHHHHHCC-CCSBCHHHHHHHHHHTTCC--CCHHHHHHHHHHHHHHTS
T ss_pred             HHHHcCCCCCHHH-HHHHHHHHhCCCCCCCHHHHHHHHHHhCCC--ccHHHHHHHHHHHHhccE
Confidence            4788999988754 4777777776 4578899999999999855  888874444566666653


No 72 
>d1h6pa_ a.146.1.1 (A:) TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.21  E-value=29  Score=24.62  Aligned_cols=50  Identities=4%  Similarity=-0.038  Sum_probs=31.5

Q ss_pred             hHHHHHHHHHHHHcCCCCCcCHHH-----HHHHHHHHHhcCChHHHHHHHHHHHh
Q 047392          148 VKGLWDFLKEMSRRGNGELVTTST-----VTCLIKVLGEEGLVNEALATFYRMKQ  197 (258)
Q Consensus       148 ~~~a~~~~~~m~~~g~~~~~~~~t-----~~~li~~~~~~g~~~~a~~l~~~M~~  197 (258)
                      +|.|..+++.+.+....+.....+     --..+-.|.+.|.+++|.++|++.-.
T Consensus        87 LESAl~v~~~I~~E~~~~~~l~e~i~~lik~qaV~VCmekg~Fk~A~eil~r~f~  141 (203)
T d1h6pa_          87 LESAINVLEMIKTEFTLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMS  141 (203)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhc
Confidence            466777777776665433211112     22345568899999999999987654


No 73 
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=36.29  E-value=40  Score=20.12  Aligned_cols=49  Identities=10%  Similarity=0.052  Sum_probs=34.9

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHH
Q 047392          172 VTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNK  222 (258)
Q Consensus       172 ~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~  222 (258)
                      -..+++. |+.|++++|.+..+++...|+...-+ .+.|.........+++
T Consensus         6 i~~il~~-~~~~~f~~a~~~i~~l~~~Gys~~dI-l~~l~~~vv~~~~i~~   54 (91)
T d1sxjd1           6 LIEIVEK-VKSGDFDEIKKYVNTFMKSGWSAASV-VNQLHEYYITNDNFDT   54 (91)
T ss_dssp             HHHHHHH-HHSCCHHHHHHHHHHHHHTSCCCTTH-HHHHHHHHHHCSSSCH
T ss_pred             HHHHHHH-HHcCCHHHHHHHHHHHHHcCCCHHHH-HHHHHHHHHhcCCCCH
Confidence            3445554 57899999999999999999877644 4566666666555443


No 74 
>d1ug3a1 a.118.1.14 (A:1235-1427) Eukaryotic initiation factor eIF4G {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.54  E-value=12  Score=26.60  Aligned_cols=63  Identities=8%  Similarity=-0.040  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHhCCC
Q 047392          134 TCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGL--VNEALATFYRMKQFRC  200 (258)
Q Consensus       134 ~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~--~~~a~~l~~~M~~~g~  200 (258)
                      ....+|.-|...|+.++|...++++....+   ...+++..+..++= .++  -+.+-+++..+.+.|+
T Consensus        12 k~~~il~Ey~~~~D~~Ea~~~l~el~~p~~---~~~~V~~~i~~~le-~~~~~re~~~~Ll~~L~~~~~   76 (193)
T d1ug3a1          12 KSKAIIEEYLHLNDMKEAVQCVQELASPSL---LFIFVRHGVESTLE-RSAIAREHMGQLLHQLLCAGH   76 (193)
T ss_dssp             HHHHHHHHHHHHCCHHHHHHHHHTTCCGGG---HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHcCCchh---HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHCCC
Confidence            567788888888888888888888743221   12334444444432 222  2345566666666554


No 75 
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.09  E-value=60  Score=20.94  Aligned_cols=71  Identities=7%  Similarity=-0.079  Sum_probs=45.8

Q ss_pred             CCHHHHHHHHHHHHccC---ChHHHHHHHHHHHHcCCCCCcCH-HHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHH
Q 047392          130 HNEVTCKEMGIVFARGN---NVKGLWDFLKEMSRRGNGELVTT-STVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVY  205 (258)
Q Consensus       130 p~~~~y~~li~~~~~~g---~~~~a~~~~~~m~~~g~~~~~~~-~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~  205 (258)
                      |+..|-=..--+++++.   +++++..++++..+.+  |. +. ..+--|--+|.+.|++++|.+.++...+.  .|+-.
T Consensus        33 ~s~qt~F~YAw~Lv~S~~~~d~~~gI~lLe~~~~~~--p~-~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~i--eP~n~  107 (124)
T d2pqrb1          33 ATIQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEA--ES-RRRECLYYLTIGCYKLGEYSMAKRYVDTLFEH--ERNNK  107 (124)
T ss_dssp             SCHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHC--GG-GHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCH
T ss_pred             CCcchHHHHHHHHHcCCcHHHHHHHHHHHHHHHhcC--ch-hHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcc--CCCcH
Confidence            44333222444555543   4568999999988753  21 21 24455666788999999999999999874  46543


No 76 
>d1klxa_ a.118.18.1 (A:) Cysteine rich protein B (HcpB) {Helicobacter pylori [TaxId: 210]}
Probab=31.19  E-value=58  Score=20.51  Aligned_cols=81  Identities=9%  Similarity=0.082  Sum_probs=54.4

Q ss_pred             CHHHHHHHHHHHHhhCCCCCCHHHHHHHHHHHHc----cCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHh----c
Q 047392          111 GINKATEFYHWVERFFHFFHNEVTCKEMGIVFAR----GNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGE----E  182 (258)
Q Consensus       111 ~~~~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~----~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~----~  182 (258)
                      +.++|++.|++..+. |   +...+..|=..|..    ..+.++|.++|++-.+.|     +......|=..|..    .
T Consensus        38 ~~~~a~~~~~~aa~~-g---~~~a~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa~~g-----~~~a~~~Lg~~y~~G~gv~  108 (133)
T d1klxa_          38 NKQKLFQYLSKACEL-N---SGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLN-----DQDGCLILGYKQYAGKGVV  108 (133)
T ss_dssp             CHHHHHHHHHHHHHT-T---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT-----CHHHHHHHHHHHHHTSSSC
T ss_pred             CHHHHHHHHhhhhcc-c---chhhhhhHHHhhhhccccchhhHHHHHHHhhhhccC-----cchHHHHHHHHHHcCCccC
Confidence            367999999988743 4   33444444444432    356789999999998887     33345555555554    4


Q ss_pred             CChHHHHHHHHHHHhCCC
Q 047392          183 GLVNEALATFYRMKQFRC  200 (258)
Q Consensus       183 g~~~~a~~l~~~M~~~g~  200 (258)
                      .+.++|.++|+.--+.|.
T Consensus       109 ~d~~~A~~~~~~Aa~~G~  126 (133)
T d1klxa_         109 KNEKQAVKTFEKACRLGS  126 (133)
T ss_dssp             CCHHHHHHHHHHHHHTTC
T ss_pred             CCHHHHHHHHHHHHHCCC
Confidence            688899999998877763


No 77 
>d1h6pa_ a.146.1.1 (A:) TRF2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.32  E-value=73  Score=22.40  Aligned_cols=49  Identities=12%  Similarity=0.186  Sum_probs=34.8

Q ss_pred             HHHHHHHHHHHHhhCCCCCCHHH-------HHHHHHHHHccCChHHHHHHHHHHHHc
Q 047392          112 INKATEFYHWVERFFHFFHNEVT-------CKEMGIVFARGNNVKGLWDFLKEMSRR  161 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~~~~-------y~~li~~~~~~g~~~~a~~~~~~m~~~  161 (258)
                      ++.|+.+++.+.++. ..|+...       =-..+-.|.+.|.+++|.+++++.-..
T Consensus        87 LESAl~v~~~I~~E~-~~~~~l~e~i~~lik~qaV~VCmekg~Fk~A~eil~r~f~~  142 (203)
T d1h6pa_          87 LESAINVLEMIKTEF-TLTEAVVESSRKLVKEAAVIICIKNKEFEKASKILKKHMSK  142 (203)
T ss_dssp             HHHHHHHHHHHHHHT-TCCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHHHHhc-ccchhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHhcC
Confidence            899999999998653 3344221       123456789999999999999887554


No 78 
>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.19  E-value=78  Score=21.37  Aligned_cols=113  Identities=10%  Similarity=-0.030  Sum_probs=60.2

Q ss_pred             HHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcC-----------
Q 047392          115 ATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEG-----------  183 (258)
Q Consensus       115 a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g-----------  183 (258)
                      +.++|+.......-..+..-+-..+..+++...-+++..+|+..-..|-+ ..+..-+..++..+....           
T Consensus        65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~~e~~~~~F~~~D~d~dG-~is~~E~~~~~~~~~~~~~~~~~~~~~~~  143 (190)
T d1fpwa_          65 ANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSWAFELYDLNHDG-YITFDEMLTIVASVYKMMGSMVTLNEDEA  143 (190)
T ss_dssp             HHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCSTHHHHHHHHHHCSSCSS-EEEHHHHHHHHHHHHTTSCSTTSSSCCCC
T ss_pred             HHHHHHHhCcCCCCcccHHHHHHHHHHHccCchHHHHHHHHHHhccCCCC-cCcHHHHHHHHHHHHHhcccccCCCchhh
Confidence            34556555322211233333333444444444455666666665433322 223333444444443211           


Q ss_pred             C-hHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHh
Q 047392          184 L-VNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNFNKARFLLEQM  230 (258)
Q Consensus       184 ~-~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~~~a~~~f~~M  230 (258)
                      . -+.+.++|+++...+  -..++|.-++.++-+.-.+-+++.+|+.|
T Consensus       144 ~~~~~v~~if~~~D~d~--dG~Is~~EF~~~~~~~p~i~~~l~~~d~~  189 (190)
T d1fpwa_         144 TPEMRVKKIFKLMDKNE--DGYITLDEFREGSKVDPSIIGALNLYDGL  189 (190)
T ss_dssp             CHHHHHHHHHHHHTTTC--SSEEEHHHHHHHHHSSTTHHHHHHHHHCC
T ss_pred             hHHHHHHHHHHHhCCCC--CCcCcHHHHHHHHHHCHHHHHHhhhhccc
Confidence            1 145667888886543  34567777888887877888888888765


No 79 
>d1brwa1 a.46.2.1 (A:1-70) Pyrimidine nucleoside phosphorylase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=28.79  E-value=47  Score=18.71  Aligned_cols=50  Identities=8%  Similarity=-0.124  Sum_probs=21.4

Q ss_pred             HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCC
Q 047392          149 KGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCR  201 (258)
Q Consensus       149 ~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~  201 (258)
                      +++..+++.+.+..+.   +...-.-|+..+.|.-..++...+-+.|.++|-.
T Consensus        19 ~E~~~~~~~i~~g~~s---~~qi~afL~al~~kG~t~~Ei~~~~~aM~~sg~~   68 (70)
T d1brwa1          19 EEIEWIVRGYTNGDIP---DYQMSALAMAIYFRGMTEEETAALTMAMVQSGEM   68 (70)
T ss_dssp             HHHHHHHHHHHTTSSC---HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHTSCC
T ss_pred             HHHHHHHHHHHcCCCC---HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhccc
Confidence            4455555555443221   2222233333333333455555555555555443


No 80 
>d1us7b_ a.205.1.1 (B:) Hsp90 co-chaperone CDC37 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.39  E-value=3.4  Score=29.94  Aligned_cols=23  Identities=13%  Similarity=0.277  Sum_probs=19.2

Q ss_pred             CHHHHHHHHHHhHhCCCCCCCCHH
Q 047392          219 NFNKARFLLEQMELPGFRCPPDVY  242 (258)
Q Consensus       219 ~~~~a~~~f~~M~~~~~~~~pd~~  242 (258)
                      .+++|+..++++..+|+ +.||..
T Consensus       178 ~~eeAe~h~~rcidsGl-wvp~~~  200 (201)
T d1us7b_         178 DPTDAKYHMQRCIDSGL-WVPNSK  200 (201)
T ss_dssp             SSSHHHHHHHHHHHHTS-SCCTTC
T ss_pred             CHHHHHHHHHHHHhcCC-CCCCCC
Confidence            56789999999999998 778853


No 81 
>d1fkma2 a.69.2.1 (A:443-630) Ypt/Rab-GAP domain of gyp1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.95  E-value=25  Score=24.51  Aligned_cols=45  Identities=7%  Similarity=-0.050  Sum_probs=23.3

Q ss_pred             HHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC
Q 047392          153 DFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMKQFR  199 (258)
Q Consensus       153 ~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g  199 (258)
                      ++++.+.+.|+.+  ..+++.=++..|++.=.++.+.++++.+...|
T Consensus        22 ~L~~hl~~~~i~~--~~~~~rW~~~lf~~~~~~~~~~rlWD~~~~~~   66 (188)
T d1fkma2          22 DLYNHFQNEHVEF--IQFAFRWMNCLLMREFQMGTVIRMWDTYLSET   66 (188)
T ss_dssp             HHHHHHHHTTCCT--HHHHHHHHHTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHcCCCe--eeeeHHHHHHHhhccCCHHHHHHHHHHHHhCC
Confidence            4444444445444  44555555555555555555555555555433


No 82 
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.27  E-value=24  Score=23.85  Aligned_cols=86  Identities=12%  Similarity=0.010  Sum_probs=48.2

Q ss_pred             HHHHHHccCChHHHHHHHHHHHHcCCCCC-cCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHH--HHHHHHH
Q 047392          138 MGIVFARGNNVKGLWDFLKEMSRRGNGEL-VTTSTVTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAY--NVVINAL  214 (258)
Q Consensus       138 li~~~~~~g~~~~a~~~~~~m~~~g~~~~-~~~~t~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty--~~li~~~  214 (258)
                      .|.-.++.|+++-+..+++.+.+.|..+. .|..-+|.|. ..+..|+.+-+    +.+.+.|..++...-  ...+...
T Consensus         6 pLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~-~A~~~~~~~iv----~~Ll~~ga~~~~~~~~~~~~~~~a   80 (228)
T d1k1aa_           6 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLH-LAVITTLPSVV----RLLVTAGASPMALDRHGQTAAHLA   80 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHH-HHHHTTCHHHH----HHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccce-ehhcccccccc----cccccccccccccccccccccccc
Confidence            45556788999988888888888887653 2332344444 44667776544    444445554444321  2233344


Q ss_pred             HHcCCHHHHHHHHH
Q 047392          215 CRVGNFNKARFLLE  228 (258)
Q Consensus       215 ~~~g~~~~a~~~f~  228 (258)
                      ...+..+-......
T Consensus        81 ~~~~~~~~~~~~~~   94 (228)
T d1k1aa_          81 CEHRSPTCLRALLD   94 (228)
T ss_dssp             HHTTCHHHHHHHHH
T ss_pred             cccccccchhhhhh
Confidence            44555544443333


No 83 
>d1ddfa_ a.77.1.2 (A:) Fas {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.15  E-value=48  Score=21.35  Aligned_cols=47  Identities=17%  Similarity=0.131  Sum_probs=32.7

Q ss_pred             CChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 047392          146 NNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEALATFYRMK  196 (258)
Q Consensus       146 g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a~~l~~~M~  196 (258)
                      +..+++.+++..-+.+. +   +..|...|+.++-+.|..+-|.++-+.+.
T Consensus        53 d~~eq~~qmL~~W~~~~-G---~~at~~~L~~aL~~~~~~dlAeki~~~~~   99 (127)
T d1ddfa_          53 DTAEQKVQLLRNWHQLH-G---KKEAYDTLIKDLKKANLCTLAEKIQTIIL   99 (127)
T ss_dssp             CCSSHHHHHHHHHHHHS-C---SSSHHHHHHHHHHHTTCSSHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHh-C---chhHHHHHHHHHHHcCcHHHHHHHHHHHh
Confidence            34567777776666542 1   23378888888888888888888777654


No 84 
>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.68  E-value=22  Score=24.03  Aligned_cols=76  Identities=4%  Similarity=-0.105  Sum_probs=33.1

Q ss_pred             HHHHHHHHHHHHhhCCCCCC---HHHHHHHHHHHHccCChHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHhcCChHHH
Q 047392          112 INKATEFYHWVERFFHFFHN---EVTCKEMGIVFARGNNVKGLWDFLKEMSRRGNGELVTTSTVTCLIKVLGEEGLVNEA  188 (258)
Q Consensus       112 ~~~a~~~f~~m~~~~~~~p~---~~~y~~li~~~~~~g~~~~a~~~~~~m~~~g~~~~~~~~t~~~li~~~~~~g~~~~a  188 (258)
                      ++-+..+.+.+. +.|..++   ..-++.|. ..+..|+.+-    ++.+.+.|..+..........+......+..+-.
T Consensus        16 ~~~v~~Ll~~~~-~~g~~in~~d~~g~TpL~-~A~~~~~~~i----v~~Ll~~ga~~~~~~~~~~~~~~~a~~~~~~~~~   89 (228)
T d1k1aa_          16 LPAVHRLVNLFQ-QGGRELDIYNNLRQTPLH-LAVITTLPSV----VRLLVTAGASPMALDRHGQTAAHLACEHRSPTCL   89 (228)
T ss_dssp             HHHHHHHHHHHH-HTTCCSCCCCTTSCCHHH-HHHHTTCHHH----HHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHHHHHHH-HCCCCCCccCCCCCccce-ehhccccccc----ccccccccccccccccccccccccccccccccch
Confidence            444444444444 3455443   33444444 4455676654    4444555544422111122334444455555443


Q ss_pred             HHHHH
Q 047392          189 LATFY  193 (258)
Q Consensus       189 ~~l~~  193 (258)
                      .....
T Consensus        90 ~~~~~   94 (228)
T d1k1aa_          90 RALLD   94 (228)
T ss_dssp             HHHHH
T ss_pred             hhhhh
Confidence            33333


No 85 
>d1peqa1 a.98.1.1 (A:13-174) R1 subunit of ribonucleotide reductase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=24.41  E-value=37  Score=23.14  Aligned_cols=27  Identities=19%  Similarity=-0.021  Sum_probs=13.9

Q ss_pred             HhcCChHHHHHHHHHHHhCCCCCCHHH
Q 047392          180 GEEGLVNEALATFYRMKQFRCRPDVYA  206 (258)
Q Consensus       180 ~~~g~~~~a~~l~~~M~~~g~~p~~~t  206 (258)
                      ...|+.+.|.++++.|...-+.|-+-|
T Consensus       125 l~~~~~~~a~~~y~~~~~~~~~~aTPT  151 (162)
T d1peqa1         125 LAQGDETLATQLTDEMLSGRFQPATPT  151 (162)
T ss_dssp             HHTTCHHHHHHHHHHHHHTSEEECHHH
T ss_pred             HccCcHHHHHHHHHHHHhCCeeCCCcH
Confidence            334555555555555555555554443


No 86 
>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.98  E-value=33  Score=19.09  Aligned_cols=19  Identities=11%  Similarity=-0.047  Sum_probs=14.3

Q ss_pred             cCChHHHHHHHHHHHhCCC
Q 047392          182 EGLVNEALATFYRMKQFRC  200 (258)
Q Consensus       182 ~g~~~~a~~l~~~M~~~g~  200 (258)
                      .-+++.|...|.+++..|-
T Consensus        33 ~Wd~~~A~~~F~~l~~~~~   51 (59)
T d1oaia_          33 NWDYTRSAQAFTHLKAKGE   51 (59)
T ss_dssp             TTCHHHHHHHHHHHHHTTC
T ss_pred             CCCHHHHHHHHHHHHhCCC
Confidence            4578888888888887653


No 87 
>d2fnaa1 a.4.5.11 (A:284-356) Hypothetical protein SSO1545, C-terminal domain {Sulfolobus solfataricus [TaxId: 2287]}
Probab=23.88  E-value=65  Score=18.66  Aligned_cols=47  Identities=6%  Similarity=-0.017  Sum_probs=24.8

Q ss_pred             HHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHcCCH
Q 047392          172 VTCLIKVLGEEGLVNEALATFYRMKQFRCRPDVYAYNVVINALCRVGNF  220 (258)
Q Consensus       172 ~~~li~~~~~~g~~~~a~~l~~~M~~~g~~p~~~ty~~li~~~~~~g~~  220 (258)
                      |-.++.+.+...+|.+..+.++.-.  |-..+-.+++.++..+.+.|-+
T Consensus         8 Y~~ILkaia~G~rWs~IK~yle~~~--G~~I~d~~ls~lL~nL~k~~~i   54 (73)
T d2fnaa1           8 YLNIMRTLSKCGKWSDVKRALELEE--GIEISDSEIYNYLTQLTKHSWI   54 (73)
T ss_dssp             HHHHHHHHTTCBCHHHHHHHHHHHH--CSCCCHHHHHHHHHHHHHTTSE
T ss_pred             HHHHHHHHHccCcHHHHHHHHHHHc--CCCCChHHHHHHHHHHHHcCce
Confidence            5556666665555555444443322  4345555566666666655544


No 88 
>d1ddfa_ a.77.1.2 (A:) Fas {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.16  E-value=49  Score=21.32  Aligned_cols=45  Identities=2%  Similarity=-0.061  Sum_probs=34.7

Q ss_pred             HHHHHHHHHHhhCCCCCCHHHHHHHHHHHHccCChHHHHHHHHHHHHc
Q 047392          114 KATEFYHWVERFFHFFHNEVTCKEMGIVFARGNNVKGLWDFLKEMSRR  161 (258)
Q Consensus       114 ~a~~~f~~m~~~~~~~p~~~~y~~li~~~~~~g~~~~a~~~~~~m~~~  161 (258)
                      .+.+++.....+.|   +..|...|+.++-+.|..+-|.++-+.+...
T Consensus        57 q~~qmL~~W~~~~G---~~at~~~L~~aL~~~~~~dlAeki~~~~~~~  101 (127)
T d1ddfa_          57 QKVQLLRNWHQLHG---KKEAYDTLIKDLKKANLCTLAEKIQTIILKD  101 (127)
T ss_dssp             HHHHHHHHHHHHSC---SSSHHHHHHHHHHHTTCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhC---chhHHHHHHHHHHHcCcHHHHHHHHHHHhhh
Confidence            66777766665544   3457899999999999999999887776544


No 89 
>d1peqa1 a.98.1.1 (A:13-174) R1 subunit of ribonucleotide reductase, N-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=20.03  E-value=47  Score=22.57  Aligned_cols=38  Identities=18%  Similarity=0.163  Sum_probs=28.6

Q ss_pred             HHHHHHHHHHHHcCCHHHHHHHHHHhHhCCCCCCCCHHHH
Q 047392          205 YAYNVVINALCRVGNFNKARFLLEQMELPGFRCPPDVYTY  244 (258)
Q Consensus       205 ~ty~~li~~~~~~g~~~~a~~~f~~M~~~~~~~~pd~~ty  244 (258)
                      .-.-..+..+...|+.+.|.++++.|...-+.  |...|+
T Consensus       115 q~~~m~vAl~l~~~~~~~a~~~y~~~~~~~~~--~aTPT~  152 (162)
T d1peqa1         115 EDRVTMVALTLAQGDETLATQLTDEMLSGRFQ--PATPTF  152 (162)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHHHHHTSEE--ECHHHH
T ss_pred             HHHHHHHHHHHccCcHHHHHHHHHHHHhCCee--CCCcHh
Confidence            33344555566678999999999999998855  877774


Done!