BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047395
(432 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 341 bits (874), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 169/350 (48%), Positives = 239/350 (68%), Gaps = 15/350 (4%)
Query: 79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYREA 137
DD +GH ++ +G+ L RY+I+ +GEGTFG+V+ C+D R G VA+K++++++KY+EA
Sbjct: 17 DDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEA 76
Query: 138 AMTEIDVLELLKRYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
A EI+VLE + D CVQ+ +WFDY H+CI FE+LG S +DFL+ NNY P+P+
Sbjct: 77 ARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPI 136
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
VR + QL + V F+HD +L HTDLKPENILFV+ DY++T + +R
Sbjct: 137 HQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNS------DYELTYNLEKKRD--ER 188
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
KS+A++V+DFGS ++H+ H+ IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E
Sbjct: 189 SVKSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYV 248
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
G LFQTH+N EHLAMMER+LGPIP M+++ K +K+ RGRLDW E ++ ++
Sbjct: 249 GFTLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRGRLDWDENTSAGRYVREN 306
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
K P + L + +H L DL++ +L Y+P+ RLT +AL+HPFF R
Sbjct: 307 CK-PLRRYLTSEAEEHHQ--LFDLIESMLEYEPAKRLTLGEALQHPFFAR 353
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 319 bits (817), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 160/343 (46%), Positives = 230/343 (67%), Gaps = 15/343 (4%)
Query: 84 HYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREAAMTEI 142
H + G+ L++RY+I+ +GEG FG+V++C+D + G VA+K+V+++ +Y EAA +EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 143 DVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE 201
VLE L D S RCVQ+ WF++ HICIVFE+LG S YDF+++N + PF +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
+ Q+ + V F+H +L HTDLKPENILFV +Y + + K+ T +N
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN--------P 174
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
IKV+DFGS Y+ + H+ +VSTRHYRAPEVIL LGWS PCD+WS+GCILIE G +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
TH++ EHLAMMER+LGP+P+HM+++ K K+ RLDW E +++ + K P
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PL 291
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ ++ Q V+H L DL+Q +L YDP+ R+T +ALKHPFF
Sbjct: 292 KEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 318 bits (814), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 232/349 (66%), Gaps = 15/349 (4%)
Query: 79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREA 137
DDK+GH + +G+ L RY+I+ +GEGTFG+V++CLD G++ VA+K++R++ KYREA
Sbjct: 35 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 94
Query: 138 AMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
A EI+VL+ +K D+ CV + +WF++ H+CI FE+LG + ++FL++NN++P+P+
Sbjct: 95 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 154
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
VR + QL + F+H+ +L HTDLKPENILFV+ E+ + + + +
Sbjct: 155 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS------- 207
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
K+++I+V DFGS ++H+ H IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E
Sbjct: 208 -VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 266
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
G LFQTHEN EHL MME++LGPIP HM+ R K +K+ +G L W E ++ +K
Sbjct: 267 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKEN 324
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
K P ++ ++H L DL++ +L +DP+ R+T +AL HPFF
Sbjct: 325 CK-PLKSYMLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFA 370
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 317 bits (812), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 232/349 (66%), Gaps = 15/349 (4%)
Query: 79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREA 137
DDK+GH + +G+ L RY+I+ +GEGTFG+V++CLD G++ VA+K++R++ KYREA
Sbjct: 12 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 71
Query: 138 AMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
A EI+VL+ +K D+ CV + +WF++ H+CI FE+LG + ++FL++NN++P+P+
Sbjct: 72 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 131
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
VR + QL + F+H+ +L HTDLKPENILFV+ E+ + + + +
Sbjct: 132 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS------- 184
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
K+++I+V DFGS ++H+ H IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E
Sbjct: 185 -VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 243
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
G LFQTHEN EHL MME++LGPIP HM+ R K +K+ +G L W E ++ +K
Sbjct: 244 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKEN 301
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
K P ++ ++H L DL++ +L +DP+ R+T +AL HPFF
Sbjct: 302 CK-PLKSYMLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 317 bits (811), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 154/349 (44%), Positives = 232/349 (66%), Gaps = 15/349 (4%)
Query: 79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREA 137
DDK+GH + +G+ L RY+I+ +GEGTFG+V++CLD G++ VA+K++R++ KYREA
Sbjct: 3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREA 62
Query: 138 AMTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
A EI+VL+ +K D+ CV + +WF++ H+CI FE+LG + ++FL++NN++P+P+
Sbjct: 63 ARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPL 122
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
VR + QL + F+H+ +L HTDLKPENILFV+ E+ + + + +
Sbjct: 123 PHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS------- 175
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
K+++I+V DFGS ++H+ H IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E
Sbjct: 176 -VKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYR 234
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
G LFQTHEN EHL MME++LGPIP HM+ R K +K+ +G L W E ++ +K
Sbjct: 235 GFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKEN 292
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
K P ++ ++H L DL++ +L +DP+ R+T +AL HPFF
Sbjct: 293 CK-PLKSYMLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 315 bits (807), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/343 (46%), Positives = 228/343 (66%), Gaps = 15/343 (4%)
Query: 84 HYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETG-ETVAIKVVRSIKKYREAAMTEI 142
H + G+ L++RY+I+ +GEG FG+V++C+D + G VA+K+V+++ +Y EAA +EI
Sbjct: 3 HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 143 DVLELLKRYD-RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE 201
VLE L D S RCVQ+ WF++ HICIVFE+LG S YDF+++N + PF +D +R+
Sbjct: 63 QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
+ Q+ + V F+H +L HTDLKPENILFV +Y + + K+ T +N
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN--------P 174
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
IKV+DFGS Y+ + H+ +V RHYRAPEVIL LGWS PCD+WS+GCILIE G +F
Sbjct: 175 DIKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF 234
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
TH++ EHLAMMER+LGP+P+HM+++ K K+ RLDW E +++ + K P
Sbjct: 235 PTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHDRLDWDEHSSAGRYVSRACK-PL 291
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ ++ Q V+H L DL+Q +L YDP+ R+T +ALKHPFF
Sbjct: 292 KEFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 254 bits (649), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 140/355 (39%), Positives = 213/355 (60%), Gaps = 17/355 (4%)
Query: 76 WRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR 135
++ DD+ H+ + G L + + ++RK+G+GTFG+VL C + + A+KVVR+IKKY
Sbjct: 16 FQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT 75
Query: 136 EAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP 195
+A E D+L+ ++ D + + V+ F Y +H+C++FE LGPSLY+ + +NNY F
Sbjct: 76 RSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFH 135
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD---VN 252
++ ++ ++L+ + ++ + L HTDLKPENIL P + K +T R TD +
Sbjct: 136 IEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEK---SLITVRRVTDGKKIQ 192
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
Y+ KS+ IK+IDFG ++ H I++TR YRAPEVIL LGW DMWS GC+L
Sbjct: 193 IYR--TKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLA 250
Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRG--RLDWPEGATS 369
EL +G LF+THE++EHLAMME ++ PIP++ML K K+V + +L WPE A+S
Sbjct: 251 ELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS 310
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
SIK V K L ++ + D L +L+ DP+ R + + LKH F
Sbjct: 311 INSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 188/360 (52%), Gaps = 38/360 (10%)
Query: 79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
DD G Y+ +++ RY++L+ IG+G+FGQV+ D + + VA+K+VR+ K++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 139 MTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
EI +LE L++ D+ + + + F +RNHIC+ FE+L +LY+ ++KN ++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
LVR+ +L+C+ +H R+IH DLKPENIL K RS
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-----------KQQGRS---------- 239
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
IKVIDFGS+ YEHQ + +R YRAPEVILG + P DMWS+GCIL EL +G
Sbjct: 240 ----GIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
L + + LA M +LG +P L K A+ FV T+ VL
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 378 KLPRLQNLVMQHVDHSAGY-----------LIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
R + ++ S + +D L+ L +DP+ R+T AL+HP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 206 bits (525), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 188/360 (52%), Gaps = 38/360 (10%)
Query: 79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
DD G Y+ +++ RY++L+ IG+G+FGQV+ D + + VA+K+VR+ K++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 139 MTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
EI +LE L++ D+ + + + F +RNHIC+ FE+L +LY+ ++KN ++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
LVR+ +L+C+ +H R+IH DLKPENIL K RS
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-----------KQQGRS---------- 239
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
IKVIDFGS+ YEHQ + +R YRAPEVILG + P DMWS+GCIL EL +G
Sbjct: 240 ----GIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
L + + LA M +LG +P L K A+ FV T+ VL
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 378 KLPRLQNLVMQHVDHSAGY-----------LIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
R + ++ S + +D L+ L +DP+ R+T AL+HP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 206 bits (523), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 187/360 (51%), Gaps = 38/360 (10%)
Query: 79 DDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA 138
DD G Y+ +++ RY++L+ IG+G FGQV+ D + + VA+K+VR+ K++ A
Sbjct: 81 DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 139 MTEIDVLELLKRYDRSGS-RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
EI +LE L++ D+ + + + F +RNHIC+ FE+L +LY+ ++KN ++ F +
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
LVR+ +L+C+ +H R+IH DLKPENIL K RS
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILL-----------KQQGRS---------- 239
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
IKVIDFGS+ YEHQ + +R YRAPEVILG + P DMWS+GCIL EL +G
Sbjct: 240 ----GIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295
Query: 318 EALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
L + + LA M +LG +P L K A+ FV T+ VL
Sbjct: 296 YPLLPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVL 354
Query: 378 KLPRLQNLVMQHVDHSAGY-----------LIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
R + ++ S + +D L+ L +DP+ R+T AL+HP+ R
Sbjct: 355 NGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRR 414
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 187/360 (51%), Gaps = 53/360 (14%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
GE RY+I IG+G+FGQV+ DR E VAIK++++ K + A E+ +LEL+
Sbjct: 30 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 150 RYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++D V ++ F +RNH+C+VFEML +LYD LR N+R ++L R+ +Q+
Sbjct: 90 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 209 CVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ F+ +L +IH DLKPENIL +P K SAIK++
Sbjct: 150 ALLFLATPELSIIHCDLKPENILLCNP-------------------------KRSAIKIV 184
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
DFGS+ Q + +R YR+PEV+LG+ + DMWS+GCIL+E+ +GE LF
Sbjct: 185 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA---VLKLP--- 380
++ + + VLG P H+L + K A KF + P+G + + K K P
Sbjct: 245 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 299
Query: 381 RLQNLVMQHVDHSAG------------YL--IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+L N++ G YL DL+ +L YDP +R+ + AL+H FF +
Sbjct: 300 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 359
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 194 bits (492), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 187/360 (51%), Gaps = 53/360 (14%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
GE RY+I IG+G+FGQV+ DR E VAIK++++ K + A E+ +LEL+
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 150 RYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++D V ++ F +RNH+C+VFEML +LYD LR N+R ++L R+ +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 209 CVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ F+ +L +IH DLKPENIL +P K SAIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNP-------------------------KRSAIKIV 203
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
DFGS+ Q + +R YR+PEV+LG+ + DMWS+GCIL+E+ +GE LF
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI---KAVLKLP--- 380
++ + + VLG P H+L + K A KF + P+G + + K K P
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 318
Query: 381 RLQNLVMQHVDHSAG------------YL--IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+L N++ G YL DL+ +L YDP +R+ + AL+H FF +
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 186/360 (51%), Gaps = 53/360 (14%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
GE RY+I IG+G+FGQV+ DR E VAIK++++ K + A E+ +LEL+
Sbjct: 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 150 RYDRSGSR-CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++D V ++ F +RNH+C+VFEML +LYD LR N+R ++L R+ +Q+
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 209 CVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ F+ +L +IH DLKPENIL +P K AIK++
Sbjct: 169 ALLFLATPELSIIHCDLKPENILLCNP-------------------------KRXAIKIV 203
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
DFGS+ Q + +R YR+PEV+LG+ + DMWS+GCIL+E+ +GE LF
Sbjct: 204 DFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA---VLKLP--- 380
++ + + VLG P H+L + K A KF + P+G + + K K P
Sbjct: 264 VDQMNKIVEVLGIPPAHILDQAPK-ARKFFEK----LPDGTWNLKKTKDGKREYKPPGTR 318
Query: 381 RLQNLVMQHVDHSAG------------YL--IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+L N++ G YL DL+ +L YDP +R+ + AL+H FF +
Sbjct: 319 KLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 187/382 (48%), Gaps = 47/382 (12%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
K G++ +G+ RY ++RK+G G F V C D + VA+KVV+S + Y E A+
Sbjct: 17 KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 141 EIDVLELLKRYDRSGSR---CVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRP 193
EI +L+ ++ D S VQ+ + F H+C+VFE+LG L ++ K+NY+
Sbjct: 77 EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 194 FPVDLVREIGRQLLECVAFMHD-LRLIHTDLKPENILF-VSPEYLK-----IPDYKVTAR 246
PV V+ I RQ+L+ + ++H ++IHTD+KPENIL V Y++ +++
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 247 SPTDVNYYKRLPKSSA--------------IKVIDFGSTAYEHQEHNYIVSTRHYRAPEV 292
P + P + +K+ D G+ + H+ + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 293 ILGLGWSYPCDMWSVGCILIELCSGEALFQTHE------NLEHLAMMERVLGPIPQHMLK 346
++G G+S P D+WS C+ EL +G+ LF+ H + +H+A + +LG IP+H
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 347 RVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD---HSAGYLIDLLQG 403
E F RRG L R K LK L +++++ A D L
Sbjct: 317 SGKYSREFFNRRGEL--------RHITK--LKPWSLFDVLVEKYGWPHEDAAQFTDFLIP 366
Query: 404 LLRYDPSSRLTAHDALKHPFFT 425
+L P R +A + L+HP+
Sbjct: 367 MLEMVPEKRASAGECLRHPWLN 388
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 196/384 (51%), Gaps = 49/384 (12%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
K G++L +G+ RY ++RK+G G F V D + + VA+KVV+S + Y E A+
Sbjct: 7 KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD 66
Query: 141 EIDVLELLKRYDRSGSR---CVQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRP 193
EI +L+ ++ D + VQ+ + F HIC+VFE+LG L ++ K+NY+
Sbjct: 67 EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 126
Query: 194 FPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK-----IPDYKVTAR 246
P+ V++I +Q+L+ + ++H R+IHTD+KPENIL V+ +Y++ +++ +
Sbjct: 127 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 186
Query: 247 SPTDVNYYKRLPKSSA----------------IKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
P + P ++ +K+ D G+ + H+ + TR YR+
Sbjct: 187 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL 246
Query: 291 EVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE------HLAMMERVLGPIPQHM 344
EV++G G++ P D+WS C+ EL +G+ LF+ H E H+A++ +LG +P+ +
Sbjct: 247 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 306
Query: 345 LKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH---VDHSAGYLIDLL 401
+ E F ++G L + I + + LV ++ + +AG+ D L
Sbjct: 307 IVAGKYSKEFFTKKGDL---------KHITKLKPWGLFEVLVEKYEWSQEEAAGF-TDFL 356
Query: 402 QGLLRYDPSSRLTAHDALKHPFFT 425
+L P R TA + L+HP+
Sbjct: 357 LPMLELIPEKRATAAECLRHPWLN 380
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/384 (28%), Positives = 196/384 (51%), Gaps = 49/384 (12%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
K G++L +G+ RY ++RK+G G F V D + + VA+KVV+S + Y E A+
Sbjct: 23 KGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALD 82
Query: 141 EIDVLELLKRYDRSGSR---CVQIRNWFDYR----NHICIVFEMLGPSLYDFLRKNNYRP 193
EI +L+ ++ D + VQ+ + F HIC+VFE+LG L ++ K+NY+
Sbjct: 83 EIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQG 142
Query: 194 FPVDLVREIGRQLLECVAFMH-DLRLIHTDLKPENILF-VSPEYLK-----IPDYKVTAR 246
P+ V++I +Q+L+ + ++H R+IHTD+KPENIL V+ +Y++ +++ +
Sbjct: 143 LPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGA 202
Query: 247 SPTDVNYYKRLPKSSA----------------IKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
P + P ++ +K+ D G+ + H+ + TR YR+
Sbjct: 203 PPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSL 262
Query: 291 EVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE------HLAMMERVLGPIPQHM 344
EV++G G++ P D+WS C+ EL +G+ LF+ H E H+A++ +LG +P+ +
Sbjct: 263 EVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKL 322
Query: 345 LKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH---VDHSAGYLIDLL 401
+ E F ++G L + I + + LV ++ + +AG+ D L
Sbjct: 323 IVAGKYSKEFFTKKGDL---------KHITKLKPWGLFEVLVEKYEWSQEEAAGF-TDFL 372
Query: 402 QGLLRYDPSSRLTAHDALKHPFFT 425
+L P R TA + L+HP+
Sbjct: 373 LPMLELIPEKRATAAECLRHPWLN 396
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 51/350 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+RY ++RK+G G F V D VA+K+VR K Y EAA EI +L+ + D +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 155 ------GSRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR 204
+ +++ + F+++ H+ +VFE+LG +L ++K +R P+ V++I +
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 205 QLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
QLL + +MH +IHTD+KPEN+L ++I D SP ++ I
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVL------MEIVD------SPENL---------IQI 177
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
K+ D G+ + + + + TR YR+PEV+LG W D+WS C++ EL +G+ LF+
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 324 HE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
E + +H+A + +LG +P ++L+ F RG L R K L
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL--------RNISK--L 287
Query: 378 KLPRLQNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
K L++++ + S A + D L +L+ DP R A + HP+
Sbjct: 288 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 175/350 (50%), Gaps = 51/350 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+RY ++RK+G G F V D VA+K+VR K Y EAA EI +L+ + D +
Sbjct: 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 78
Query: 155 ------GSRCVQIRNWFDYRN----HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR 204
+ +++ + F+++ H+ +VFE+LG +L ++K +R P+ V++I +
Sbjct: 79 KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138
Query: 205 QLLECVAFMHD-LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
QLL + +MH +IHTD+KPEN+L ++I D SP ++ I
Sbjct: 139 QLLLGLDYMHRRCGIIHTDIKPENVL------MEIVD------SPENL---------IQI 177
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
K+ D G+ + + + + TR YR+PEV+LG W D+WS C++ EL +G+ LF+
Sbjct: 178 KIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237
Query: 324 HE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
E + +H+A + +LG +P ++L+ F RG L R K L
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLL--------RNISK--L 287
Query: 378 KLPRLQNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
K L++++ + S A + D L +L+ DP R A + HP+
Sbjct: 288 KFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 153/331 (46%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L DF+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKPEN+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 219 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 66
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L DF+ + P+ L++ QLL+ +AF H
Sbjct: 67 -IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 166
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 222 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 262
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 263 GR---SLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L DF+ + P+ L++ QLL+ +AF H
Sbjct: 66 -IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 221 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 65 -IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKPEN+L + +K+ D+ L ++ + V Y H+
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 220 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 66
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 67 -IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKPEN+L + +K+ D+ L ++ + V Y H+
Sbjct: 126 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 166
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 222 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 262
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 263 GR---SLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 65 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKPEN+L + +K+ D+ L ++ + V Y H+
Sbjct: 124 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 220 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 66 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKPEN+L + +K+ D+ L ++ + V Y H+
Sbjct: 125 RVLHRDLKPENLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 221 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 163/356 (45%), Gaps = 77/356 (21%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+S++K L K+G GT+ V L++ TG VA+K V+ S + A+ EI +++ LK
Sbjct: 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH- 62
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK----NNYRPFPVDLVREIGRQLL 207
V++ + N + +VFE + L ++ N R ++LV+ QLL
Sbjct: 63 ----ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +AF H+ +++H DLKP+N+L LK+ D+ L ++ I V
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG--------------LARAFGIPVNT 164
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
F S V T YRAP+V++G +S D+WS GCIL E+ +G+ LF +
Sbjct: 165 FSSE----------VVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND 214
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR----- 381
E L ++ ++G P E WP +V KLP+
Sbjct: 215 EEQLKLIFDIMG-----------TPNESL-------WP----------SVTKLPKYNPNI 246
Query: 382 -------LQNLVMQHVDHSA-GYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY 429
L+ ++ H G L+D L GLL+ +P RL+A AL HP+F Y+
Sbjct: 247 QQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
G ++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ V++ + N + +VFE L L F+ + P+ L++ QLL+
Sbjct: 61 ELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+AF H R++H DLKP+N+L + +K+ D+ L ++ + V
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV---- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE 328
Y H+ V T YRAPE++LG +S D+WS+GCI E+ + ALF ++
Sbjct: 161 -RTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--V 386
L + R LG P E + WP G TS K Q+ V
Sbjct: 215 QLFRIFRTLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKV 255
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ +D LL +L YDP+ R++A AL HPFF
Sbjct: 256 VPPLDEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/338 (29%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
G ++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ V++ + N + +VFE L L F+ + P+ L++ QLL+
Sbjct: 61 ELNHPN--IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+AF H R++H DLKP+N+L + +K+ D+ L ++ + V
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV---- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE 328
Y H+ V T YRAPE++LG +S D+WS+GCI E+ + ALF ++
Sbjct: 161 -RTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--V 386
L + R LG P E + WP G TS K Q+ V
Sbjct: 215 QLFRIFRTLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKV 255
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ +D LL +L YDP+ R++A AL HPFF
Sbjct: 256 VPPLDEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 71 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 170
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 171 -----VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 226 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 266
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 267 GR---SLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 65 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 220 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 65 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 220 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 219 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 63 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 67
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 68 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 167
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 168 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 223 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 263
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 264 GR---SLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 66
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 67 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 126 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 166
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 167 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 222 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 262
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 263 GR---SLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 66 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 221 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 67
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 68 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 167
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 168 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 223 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 263
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 264 GR---SLLSQMLHYDPNKRISAKAALAHPFF 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 66 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 125 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 165
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 166 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P ++ WP G TS K Q+ V+ +D
Sbjct: 221 TLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 261
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 262 GR---SLLSQMLHYDPNKRISAKAALAHPFF 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 63 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 63 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 12 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 71 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 170
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 171 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 226 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 266
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 267 GR---SLLSQMLHYDPNKRISAKAALAHPFF 294
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 178/339 (52%), Gaps = 24/339 (7%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
+Y++++K+G+G +G V +DR TGE VA+K + + + +A T EI +L L ++
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHE 69
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
+ +R D + +VF+ + L+ +R N P V QL++ + +
Sbjct: 70 NIVNLLNVLR--ADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKVIKY 124
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H L+H D+KP NIL + ++K+ D+ ++ RS ++ +R+ + + + +
Sbjct: 125 LHSGGLLHRDMKPSNILLNAECHVKVADFGLS-RSFVNI---RRVTNNIPLSINENTENF 180
Query: 273 YEHQE--HNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ Q +Y V+TR YRAPE++LG ++ DMWS+GCIL E+ G+ +F +
Sbjct: 181 DDDQPILTDY-VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ- 388
L ER++G I + V+ F + E R+S K + + +NL+++
Sbjct: 240 L---ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDI-FTKWKNLLLKI 295
Query: 389 --HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
D + L DLL LL+++P+ R++A+DALKHPF +
Sbjct: 296 NPKADCNEEAL-DLLDKLLQFNPNKRISANDALKHPFVS 333
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 63 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 65 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 164
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 165 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 220 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 260
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 261 GR---SLLSQMLHYDPNKRISAKAALAHPFF 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYXHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 122 bits (306), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 153/338 (45%), Gaps = 51/338 (15%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
G ++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK
Sbjct: 1 GPGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ V++ + N + +VFE + L F+ + P+ L++ QLL+
Sbjct: 61 ELNHPN--IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+AF H R++H DLKP+N+L + +K+ D+ L ++ + V
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV---- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLE 328
Y H+ V T YRAPE++LG +S D+WS+GCI E+ + ALF ++
Sbjct: 161 -RTYXHE-----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID 214
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--V 386
L + R LG P ++ WP G TS K Q+ V
Sbjct: 215 QLFRIFRTLG-TPDEVV-----------------WP-GVTSMPDYKPSFPKWARQDFSKV 255
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ +D LL +L YDP+ R++A AL HPFF
Sbjct: 256 VPPLDEDGR---SLLSQMLHYDPNKRISAKAALAHPFF 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ ++F H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 152/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+K +R + T I + LLK +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE + L F+ + P+ L++ QLL+ +AF H
Sbjct: 63 -IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 151/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+ +R + T I + LLK +
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN- 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 64 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 163
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 164 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 219 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 259
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 260 GR---SLLSQMLHYDPNKRISAKAALAHPFF 287
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/331 (29%), Positives = 151/331 (45%), Gaps = 51/331 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ + KIGEGT+G V ++ TGE VA+ +R + T I + LLK +
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN- 62
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + N + +VFE L L F+ + P+ L++ QLL+ +AF H
Sbjct: 63 -IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R++H DLKP+N+L + +K+ D+ L ++ + V Y H+
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFG--------------LARAFGVPV-----RTYTHE 162
Query: 277 EHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YRAPE++LG +S D+WS+GCI E+ + ALF ++ L + R
Sbjct: 163 -----VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 217
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL--VMQHVDHS 393
LG P E + WP G TS K Q+ V+ +D
Sbjct: 218 TLG-----------TPDE-------VVWP-GVTSMPDYKPSFPKWARQDFSKVVPPLDED 258
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL +L YDP+ R++A AL HPFF
Sbjct: 259 GR---SLLSQMLHYDPNKRISAKAALAHPFF 286
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/340 (29%), Positives = 158/340 (46%), Gaps = 60/340 (17%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEIDVLELLK 149
+ +Y+ + KIGEG++G V C +R+TG+ VAIK + ++ A+ EI +L+ LK
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK 60
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
V + F + + +VFE ++ L + R P LV+ I Q L+
Sbjct: 61 H-----PNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQ-RGVPEHLVKSITWQTLQA 114
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
V F H IH D+KPENIL K S IK+ DFG
Sbjct: 115 VNFCHKHNCIHRDVKPENILIT---------------------------KHSVIKLCDFG 147
Query: 270 STAYEHQEHNYI---VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
+Y V+TR YR+PE+++G + P D+W++GC+ EL SG L+
Sbjct: 148 FARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKS 207
Query: 326 NLEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+++ L ++ + LG IP+H ++V ++ ++ PE E LK P
Sbjct: 208 DVDQLYLIRKTLGDLIPRH--QQVFS-TNQYFSGVKIPDPEDMEPLE-----LKFP---- 255
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
++ + A + LL+G L DP+ RLT L HP+F
Sbjct: 256 ----NISYPA---LGLLKGCLHMDPTERLTCEQLLHHPYF 288
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 148/345 (42%), Gaps = 63/345 (18%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD- 152
TSRY+ + +IG G +G V D +G VA+K VR ++ + + LL+R +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 -------RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
R C R D + +VFE + L +L K P + ++++ RQ
Sbjct: 63 FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
L + F+H ++H DLKPENIL S +K+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKL 153
Query: 266 IDFG-STAYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
DFG + Y +Q + +V T YRAPEV+L ++ P DMWSVGCI E+ + LF
Sbjct: 154 ADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 213
Query: 324 HENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ + L + ++G P+ R V P F RG PR
Sbjct: 214 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------------PRP 253
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
V+ ++ S LL +L ++P R++A AL+H + +D
Sbjct: 254 VQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
+Y+ + +IGEG +G+V D + G VA+K VR ++ E + + E+ VL L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70
Query: 151 YD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
++ R C R D + +VFE + L +L K P + ++++ Q
Sbjct: 71 FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
LL + F+H R++H DLKP+NIL S S IK+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKL 161
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
DFG + Y Q +V T YRAPEV+L ++ P D+WSVGCI E+ + LF+
Sbjct: 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP-EGATSRESIKAVLKLPRL 382
+++ L + V+G +P G DWP + A R++ + P +
Sbjct: 222 SSDVDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-I 262
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ V +D DLL L ++P+ R++A+ AL HP+F
Sbjct: 263 EKFVTD-IDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
+Y+ + +IGEG +G+V D + G VA+K VR ++ E + + E+ VL L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70
Query: 151 YD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
++ R C R D + +VFE + L +L K P + ++++ Q
Sbjct: 71 FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
LL + F+H R++H DLKP+NIL S S IK+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKL 161
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
DFG + Y Q +V T YRAPEV+L ++ P D+WSVGCI E+ + LF+
Sbjct: 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP-EGATSRESIKAVLKLPRL 382
+++ L + V+G +P G DWP + A R++ + P +
Sbjct: 222 SSDVDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-I 262
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ V +D DLL L ++P+ R++A+ AL HP+F
Sbjct: 263 EKFVTD-IDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 148/345 (42%), Gaps = 63/345 (18%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD- 152
TSRY+ + +IG G +G V D +G VA+K VR ++ + + LL+R +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 -------RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
R C R D + +VFE + L +L K P + ++++ RQ
Sbjct: 63 FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
L + F+H ++H DLKPENIL S +K+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKL 153
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
DFG + Y +Q + +V T YRAPEV+L ++ P DMWSVGCI E+ + LF
Sbjct: 154 ADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 213
Query: 324 HENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ + L + ++G P+ R V P F RG PR
Sbjct: 214 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------------PRP 253
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
V+ ++ S LL +L ++P R++A AL+H + +D
Sbjct: 254 VQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 158/342 (46%), Gaps = 66/342 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLD-RETGETVAIKVVRSIKKYRE----AAMTEIDVLELLKR 150
+Y+ + +IGEG +G+V D + G VA+K VR ++ E + + E+ VL L+
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR-VQTGEEGMPLSTIREVAVLRHLET 70
Query: 151 YD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
++ R C R D + +VFE + L +L K P + ++++ Q
Sbjct: 71 FEHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
LL + F+H R++H DLKP+NIL S S IK+
Sbjct: 129 LLRGLDFLHSHRVVHRDLKPQNILVTS---------------------------SGQIKL 161
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
DFG + Y Q +V T YRAPEV+L ++ P D+WSVGCI E+ + LF+
Sbjct: 162 ADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG 221
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP-EGATSRESIKAVLKLPRL 382
+++ L + V+G +P G DWP + A R++ + P +
Sbjct: 222 SSDVDQLGKILDVIG-LP-----------------GEEDWPRDVALPRQAFHSKSAQP-I 262
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ V +D DLL L ++P+ R++A+ AL HP+F
Sbjct: 263 EKFVTD-IDELGK---DLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/345 (27%), Positives = 147/345 (42%), Gaps = 63/345 (18%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD- 152
TSRY+ + +IG G +G V D +G VA+K VR ++ + + LL+R +
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 153 -------RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
R C R D + +VFE + L +L K P + ++++ RQ
Sbjct: 63 FEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
L + F+H ++H DLKPENIL S +K+
Sbjct: 121 FLRGLDFLHANCIVHRDLKPENILVTS---------------------------GGTVKL 153
Query: 266 IDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
DFG + Y +Q +V T YRAPEV+L ++ P DMWSVGCI E+ + LF
Sbjct: 154 ADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG 213
Query: 324 HENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ + L + ++G P+ R V P F RG PR
Sbjct: 214 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------------PRP 253
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
V+ ++ S LL +L ++P R++A AL+H + +D
Sbjct: 254 VQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 295
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKS---QKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + S +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDSEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 150/353 (42%), Gaps = 66/353 (18%)
Query: 89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE------AAMTEI 142
LG TSRY+ + +IG G +G V D +G VA+K VR + + E+
Sbjct: 3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 143 DVLELLKRYD-----RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
+L L+ ++ R C R D + +VFE + L +L K P +
Sbjct: 63 ALLRRLEAFEHPNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAE 120
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
++++ RQ L + F+H ++H DLKPENIL S
Sbjct: 121 TIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTS------------------------- 155
Query: 258 PKSSAIKVIDFG-STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
+K+ DFG + Y +Q +V T YRAPEV+L ++ P DMWSVGCI E+
Sbjct: 156 --GGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKR-VDKPAEKFVRRGRLDWPEGATSRESIK 374
+ LF + + L + ++G P+ R V P F RG
Sbjct: 214 RRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRG--------------- 258
Query: 375 AVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
PR V+ ++ S LL +L ++P R++A AL+H + +D
Sbjct: 259 -----PRPVQSVVPEMEESGA---QLLLEMLTFNPHKRISAFRALQHSYLHKD 303
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 85 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + S +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDSEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 89 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + S +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDSEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 72/336 (21%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKV--------VRSIKKYREAA----MTEIDVLELLKR 150
+G G +G V +D+ +GE VAIK + + + YRE M +V+ LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ + S +RN++D F ++ P + L+K F + ++ + Q+L+ +
Sbjct: 110 FTPASS----LRNFYD--------FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGL 157
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H ++H DLKP N+ VN + +K++DFG
Sbjct: 158 KYIHSAGVVHRDLKPGNLA---------------------VN------EDCELKILDFGL 190
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ E V TR YRAPEVIL + ++ D+WSVGCI+ E+ +G+ LF+ + L+
Sbjct: 191 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 250
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
L + +V G P + + K DK A+ + I+++ + PR Q
Sbjct: 251 LTQILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRKD--FTQ 291
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
++ DLL+ +L D RLTA AL HPFF
Sbjct: 292 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 154/336 (45%), Gaps = 72/336 (21%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKV--------VRSIKKYREAA----MTEIDVLELLKR 150
+G G +G V +D+ +GE VAIK + + + YRE M +V+ LL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ + S +RN++D F ++ P + L+K F + ++ + Q+L+ +
Sbjct: 92 FTPASS----LRNFYD--------FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGL 139
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H ++H DLKP N+ VN + +K++DFG
Sbjct: 140 KYIHSAGVVHRDLKPGNLA---------------------VN------EDCELKILDFGL 172
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ E V TR YRAPEVIL + ++ D+WSVGCI+ E+ +G+ LF+ + L+
Sbjct: 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 232
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
L + +V G P + + K DK A+ + I+++ + PR Q
Sbjct: 233 LTQILKVTGVPGTEFVQKLNDKAAKSY-----------------IQSLPQTPRKD--FTQ 273
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
++ DLL+ +L D RLTA AL HPFF
Sbjct: 274 LFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 102 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 150
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 183
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 184 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 244 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 287
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 288 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKX---QKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 89 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 79 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 161 KILDFGLARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L IG G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 88 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 79 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 161 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 103 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 151
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 184
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 185 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 245 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 288
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 289 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 93 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 141
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 142 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 174
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 175 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 234
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 235 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 278
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 279 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 320
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 103 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 151
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 184
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 185 KILDFGLARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 245 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 288
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 289 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 81 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 129
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 130 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 162
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 163 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 222
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 223 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 266
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 267 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 308
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 94 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 142
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 175
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 176 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 236 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 279
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 280 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 95 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 176
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 177 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 237 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 280
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 281 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 95 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 176
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 177 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 237 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 280
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 281 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 79 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 161 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 95 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 144 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 176
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 177 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 236
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 237 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 280
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 281 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 322
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 80 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 128
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 161
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 162 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 222 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 265
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 266 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 88 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDXEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 94 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 142
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 143 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 175
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 176 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 235
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 236 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 279
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 280 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 321
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 80 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 128
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 129 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 161
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 162 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 221
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 222 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 265
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 266 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 307
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 103 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 151
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 152 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 184
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 185 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 244
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 245 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 288
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 289 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 330
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 85 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 85 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ D V+ +
Sbjct: 79 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLI 127
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 128 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 160
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 161 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 220
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 221 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLAQMPKM 264
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 265 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 306
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 90 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 172 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 102 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 150
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 151 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 183
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 184 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 243
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 244 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 287
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 288 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 329
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 90 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 172 KILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 85 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 134 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 166
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 167 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 226
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 227 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 270
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 271 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 312
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 88 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 82 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 130
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 131 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 163
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 164 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 223
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 224 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 267
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 268 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 309
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 106 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 154
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ + + +
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCEL 187
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 188 KILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 248 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 291
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 292 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 89 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 88 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 137 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 169
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 170 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 229
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 230 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 273
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 274 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 315
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 90 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 172 KILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 90 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 138
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 139 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 172 KILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 231
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 232 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 275
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 276 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 317
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 106 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 154
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 155 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 187
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 188 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 247
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 248 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 291
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 292 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 333
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 89 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 137
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ + + +
Sbjct: 138 YQILRGLKYIHSADIIHRDLKPSNL---------------------------AVNEDCEL 170
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 171 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 230
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 231 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 274
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 275 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 316
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D ++G +A+K ++ + + YRE M +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 112 VIGLLDVFTPATS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 160
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 161 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 193
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DFG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 194 KILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFP 253
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+++ L + R+ G P ++ R+ S E+ + LP++
Sbjct: 254 GTDHINQLQQIMRLTGTPPASVISRM-------------------PSHEARNYINSLPQM 294
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
V A L +DLL+ +L D R+TA +AL HP+F++
Sbjct: 295 PKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ 339
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 159/345 (46%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++D+G + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++DF + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++ FG + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 159/350 (45%), Gaps = 55/350 (15%)
Query: 87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE 146
F + ++ Y+I+ IG G +G V R TG+ VAIK + + A + L+
Sbjct: 46 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 147 LLKRYDRSGSRCVQ--IRNWFDYR--NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
+LK + ++ +R Y + +V +++ L+ + + +P ++ VR
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYF 163
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT---ARSPTDVNYYKRLPK 259
QLL + +MH ++IH DLKP N+L LKI D+ + SP + Y+
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM---- 219
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGE 318
T Y V+TR YRAPE++L L ++ D+WSVGCI E+ +
Sbjct: 220 -----------TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + L ++ VLG P+ ++ A E ++A ++
Sbjct: 261 QLFPGKNYVHQLQLIMMVLG-----------TPSPAVIQ---------AVGAERVRAYIQ 300
Query: 379 -LPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
LP Q + + V A + LL +LR++PS+R++A AL+HPF +
Sbjct: 301 SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 350
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 159/350 (45%), Gaps = 55/350 (15%)
Query: 87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLE 146
F + ++ Y+I+ IG G +G V R TG+ VAIK + + A + L+
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 147 LLKRYDRSGSRCVQ--IRNWFDYR--NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
+LK + ++ +R Y + +V +++ L+ + + +P ++ VR
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYF 164
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT---ARSPTDVNYYKRLPK 259
QLL + +MH ++IH DLKP N+L LKI D+ + SP + Y+
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFM---- 220
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGE 318
T Y V+TR YRAPE++L L ++ D+WSVGCI E+ +
Sbjct: 221 -----------TEY--------VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + L ++ VLG P+ ++ A E ++A ++
Sbjct: 262 QLFPGKNYVHQLQLIMMVLG-----------TPSPAVIQ---------AVGAERVRAYIQ 301
Query: 379 -LPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
LP Q + + V A + LL +LR++PS+R++A AL+HPF +
Sbjct: 302 SLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK 351
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
+ RYK R +G+G+FG+V+ C D+ TG+ A+KV+ R +K+ +E+ + E+ +LL
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 104
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K+ D +++ +F+ + + +V E+ G L+D + R VD R I RQ+L
Sbjct: 105 KQLDH--PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 160
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +MH +++H DLKPEN+L S K + I++ID
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 196
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
FG ST +E ++ + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 197 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 252
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
G +LK+V+K F + P+ ES K
Sbjct: 253 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 283
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DL++ +L Y PS R++A DAL H +
Sbjct: 284 -------------DLIRKMLTYVPSMRISARDALDHEWI 309
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++D G + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 157/375 (41%), Gaps = 93/375 (24%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE------AAMTEIDV 144
E + +Y + + +G G+FG V + D E+G+ A+K V +Y+ + +++
Sbjct: 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62
Query: 145 LELLKRYDRSGSRCVQIRNWFDYRN------------------------HICIVFEMLGP 180
++L+ + +G + D N ++ ++ E +
Sbjct: 63 IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD 122
Query: 181 SLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
+L+ L+ + R P++L+ QL V F+H L + H D+KP+N+L S
Sbjct: 123 TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS------ 176
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA--YEHQEHNYIVSTRHYRAPEVILGL 296
K + +K+ DFGS + + +R YRAPE++LG
Sbjct: 177 --------------------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGA 216
Query: 297 GWSYPC-DMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAE- 353
P D+WS+GC+ EL G+ LF +++ L + +++G P + M++ E
Sbjct: 217 TEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEV 276
Query: 354 KFVRRGRLDW----PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDP 409
+F DW PEG S IDLL+ +LRY+P
Sbjct: 277 RFPTLKAKDWRKILPEGTPS--------------------------LAIDLLEQILRYEP 310
Query: 410 SSRLTAHDALKHPFF 424
R+ ++A+ HPFF
Sbjct: 311 DLRINPYEAMAHPFF 325
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
+ RYK R +G+G+FG+V+ C D+ TG+ A+KV+ R +K+ +E+ + E+ +LL
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 103
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K+ D +++ +F+ + + +V E+ G L+D + R VD R I RQ+L
Sbjct: 104 KQLDH--PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 159
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +MH +++H DLKPEN+L S K + I++ID
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 195
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
FG ST +E ++ + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 196 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 251
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
G +LK+V+K F + P+ ES K
Sbjct: 252 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 282
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DL++ +L Y PS R++A DAL H +
Sbjct: 283 -------------DLIRKMLTYVPSMRISARDALDHEWI 308
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 96/342 (28%), Positives = 153/342 (44%), Gaps = 64/342 (18%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV----RSIKK--YREAAMTEIDVLEL 147
RY+ L +GEG F V D+ T + VAIK + RS K A+ EI +L+
Sbjct: 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQE 68
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
L S + + + F ++++I +VF+ + L ++ N+ P ++ L
Sbjct: 69 L-----SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH-IKAYMLMTL 122
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ + ++H ++H DLKP N+L LK+ D+ + A+S
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGL-AKS-------------------- 161
Query: 268 FGST--AYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTH 324
FGS AY HQ V TR YRAPE++ G + DMW+VGCIL EL
Sbjct: 162 FGSPNRAYXHQ-----VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD 216
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+L+ L + LG P E+ WP+ S+ +
Sbjct: 217 SDLDQLTRIFETLG-----------TPTEE-------QWPDMC----SLPDYVTFKSFPG 254
Query: 385 LVMQHVDHSAGY-LIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+ + H+ +AG L+DL+QGL ++P +R+TA ALK +F+
Sbjct: 255 IPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFS 296
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
+ RYK R +G+G+FG+V+ C D+ TG+ A+KV+ R +K+ +E+ + E+ +LL
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 80
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K+ D +++ +F+ + + +V E+ G L+D + R VD R I RQ+L
Sbjct: 81 KQLDH--PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 136
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +MH +++H DLKPEN+L S K + I++ID
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 172
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
FG ST +E ++ + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 173 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 228
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
G +LK+V+K F + P+ ES K
Sbjct: 229 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 259
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DL++ +L Y PS R++A DAL H +
Sbjct: 260 -------------DLIRKMLTYVPSMRISARDALDHEWI 285
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 156/337 (46%), Gaps = 39/337 (11%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLK 149
N++S +++ +GEG +G V + TGE VAIK + K + + EI +L+ K
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ +Q + F+ N + I+ E++ L+ R + + D ++ Q L
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
V +H +IH DLKP N+L S LK+ D+ + AR + P +++F
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGL-ARIIDESAADNSEPTGQQSGMVEF- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
V+TR YRAPEV+L +S D+WS GCIL EL +F +
Sbjct: 183 ------------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 329 HLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
L ++ ++G P + L+ ++ P +RE IK++ P M
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESP----------------RAREYIKSLPMYPAAPLEKM 274
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ G IDLLQ +L +DP+ R+TA +AL+HP+
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y L KIGEGT+G V GET A+K +R K+ T I + +LK S
Sbjct: 3 KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V++ + + + +VFE L L L V + QLL +A+ HD
Sbjct: 62 --IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLLQLLNGIAYCHD 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
R++H DLKP+N+L LKI D+ L ++ I V Y H
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFG--------------LARAFGIPV-----RKYTH 159
Query: 276 QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
+ V T YRAP+V++G +S D+WSVGCI E+ +G LF + L +
Sbjct: 160 E-----VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIF 214
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE-GATSRESIKAVLKLPRLQNLVMQHVDHS 393
R+LG P K +WP + + P ++ +D S
Sbjct: 215 RILG-----------TPNSK-------NWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
IDLL +L+ DP+ R+TA AL+H +F +
Sbjct: 257 G---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y L KIGEGT+G V GET A+K +R K+ T I + +LK S
Sbjct: 3 KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V++ + + + +VFE L L L V + QLL +A+ HD
Sbjct: 62 --IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLLQLLNGIAYCHD 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
R++H DLKP+N+L LKI D+ L ++ I V Y H
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFG--------------LARAFGIPV-----RKYTH 159
Query: 276 QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
+ V T YRAP+V++G +S D+WSVGCI E+ +G LF + L +
Sbjct: 160 E-----VVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE-GATSRESIKAVLKLPRLQNLVMQHVDHS 393
R+LG P K +WP + + P ++ +D S
Sbjct: 215 RILG-----------TPNSK-------NWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
IDLL +L+ DP+ R+TA AL+H +F +
Sbjct: 257 G---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++D G + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 105 bits (261), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 158/345 (45%), Gaps = 71/345 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK--------VVRSIKKYRE----AAMTEID 143
RY+ L +G G +G V D +TG VA+K ++ + + YRE M +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
V+ LL + + S + N + +V ++G L + ++ + D V+ +
Sbjct: 83 VIGLLDVFTPARS--------LEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLI 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + ++H +IH DLKP N+ VN + +
Sbjct: 132 YQILRGLKYIHSADIIHRDLKPSNLA---------------------VN------EDCEL 164
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQ 322
K++D G + E V+TR YRAPE++L + ++ D+WSVGCI+ EL +G LF
Sbjct: 165 KILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFP 224
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
++++ L ++ R++G +LK++ ++R I+++ ++P++
Sbjct: 225 GTDHIDQLKLILRLVGTPGAELLKKI----------------SSESARNYIQSLTQMPKM 268
Query: 383 QNLVMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+V A L +DLL+ +L D R+TA AL H +F +
Sbjct: 269 N---FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 310
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 39/337 (11%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLK 149
N++S +++ +GEG +G V + TGE VAIK + K + + EI +L+ K
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ +Q + F+ N + I+ E++ L+ R + + D ++ Q L
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
V +H +IH DLKP N+L S LK+ D+ + R+ SA D
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-----------RIIDESAA---DNS 170
Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
+ V+TR YRAPEV+L +S D+WS GCIL EL +F +
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 329 HLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
L ++ ++G P + L+ ++ P +RE IK++ P M
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESP----------------RAREYIKSLPMYPAAPLEKM 274
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ G IDLLQ +L +DP+ R+TA +AL+HP+
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 73/353 (20%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRY 151
+Y+ L +GEG++G V+ C +++TG VAIK K ++ AM EI +L+ L+
Sbjct: 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 152 DRSG--SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL----VREIGRQ 205
+ C + + W+ +VFE + ++ D + FP L V++ Q
Sbjct: 85 NLVNLLEVCKKKKRWY-------LVFEFVDHTILD-----DLELFPNGLDYQVVQKYLFQ 132
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
++ + F H +IH D+KPENIL + +S +K+
Sbjct: 133 IINGIGFCHSHNIIHRDIKPENIL---------------------------VSQSGVVKL 165
Query: 266 IDFG---STAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALF 321
DFG + A + ++ V+TR YRAPE+++G + + D+W++GC++ E+ GE LF
Sbjct: 166 CDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLF 225
Query: 322 QTHENLEHLAMMERVLGP-IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLP 380
+++ L + LG IP+H P VR PE RE ++ + P
Sbjct: 226 PGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR-----LPE-IKEREPLER--RYP 277
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD-YYRRF 432
+L +V IDL + L DP R + L H FF D + RF
Sbjct: 278 KLSEVV-----------IDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAERF 319
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/334 (29%), Positives = 145/334 (43%), Gaps = 51/334 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y L KIGEGT+G V GET A+K +R K+ T I + +LK S
Sbjct: 3 KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN 61
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V++ + + + +VFE L L L V + QLL +A+ HD
Sbjct: 62 --IVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVT-AKSFLLQLLNGIAYCHD 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
R++H DLKP+N+L LKI D+ L ++ I V Y H
Sbjct: 119 RRVLHRDLKPQNLLINREGELKIADFG--------------LARAFGIPV-----RKYTH 159
Query: 276 QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
+ + T YRAP+V++G +S D+WSVGCI E+ +G LF + L +
Sbjct: 160 E-----IVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIF 214
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE-GATSRESIKAVLKLPRLQNLVMQHVDHS 393
R+LG P K +WP + + P ++ +D S
Sbjct: 215 RILG-----------TPNSK-------NWPNVTELPKYDPNFTVYEPLPWESFLKGLDES 256
Query: 394 AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
IDLL +L+ DP+ R+TA AL+H +F +
Sbjct: 257 G---IDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 45/341 (13%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
S+Y+ L KIG+GTFG+V R+TG+ VA+K V + + A+ EI +L+LLK
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+ C + + + I +VF+ L L N F + ++ + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H +++H D+K N+L LK+ D+ + +
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFS 176
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+ ++ N +V T YR PE++LG + P D+W GCI+ E+ + + Q +
Sbjct: 177 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
LA++ ++ G I + VD + + L + ++ +KA ++ P
Sbjct: 236 QHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP------ 287
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
Y +DL+ LL DP+ R+ + DAL H FF D
Sbjct: 288 ---------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/337 (28%), Positives = 154/337 (45%), Gaps = 39/337 (11%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLK 149
N++S +++ +GEG +G V + TGE VAIK + K + + EI +L+ K
Sbjct: 8 NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ +Q + F+ N + I+ E++ L+ R + + D ++ Q L
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLH---RVISTQMLSDDHIQYFIYQTLRA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
V +H +IH DLKP N+L S LK+ D+ + R+ SA D
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-----------RIIDESAA---DNS 170
Query: 270 STAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
+ V+TR YRAPEV+L +S D+WS GCIL EL +F +
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH 230
Query: 329 HLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
L ++ ++G P + L+ ++ P +RE IK++ P M
Sbjct: 231 QLLLIFGIIGTPHSDNDLRCIESP----------------RAREYIKSLPMYPAAPLEKM 274
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ G IDLLQ +L +DP+ R+TA +AL+HP+
Sbjct: 275 FPRVNPKG--IDLLQRMLVFDPAKRITAKEALEHPYL 309
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 156/339 (46%), Gaps = 84/339 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
+ RYK R +G+G+FG+V+ C D+ TG+ A+KV+ R +K+ +E+ + E+ +LL
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 86
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K+ D +++ +F+ + + +V E+ G L+D + R VD R I RQ+L
Sbjct: 87 KQLDHPN--IMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 142
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +MH +++H DLKPEN+L S K + I++ID
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 178
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
FG ST +E ++ + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 179 FGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 234
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
G +LK+V+K F + P+ ES K
Sbjct: 235 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 265
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DL++ +L Y PS R++A DAL H +
Sbjct: 266 -------------DLIRKMLTYVPSMRISARDALDHEWI 291
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 154/354 (43%), Gaps = 82/354 (23%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
GE Y + IG G+FG V E+ E VAIK V K+++ E+ ++ ++K
Sbjct: 35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKN---RELQIMRIVK 90
Query: 150 RYDRSGSRCVQIRNWF----DYRNHICI--VFEMLGPSLYDFLR--KNNYRPFPVDLVRE 201
V ++ +F D ++ + + V E + ++Y R + P+ L++
Sbjct: 91 H-----PNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKL 145
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
QLL +A++H + + H D+KP+N+L P S
Sbjct: 146 YMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP--------------------------SG 179
Query: 262 AIKVIDFGSTAY--EHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGE 318
+K+IDFGS + + + +R+YRAPE+I G ++ D+WS GC++ EL G+
Sbjct: 180 VLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
Query: 319 ALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL- 377
LF ++ L + +VL G SRE IK +
Sbjct: 240 PLFPGESGIDQLVEIIKVL----------------------------GTPSREQIKTMNP 271
Query: 378 -----KLPRLQNLVMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
K P+++ V + IDL+ LL Y PS+RLTA +AL HPFF
Sbjct: 272 NYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 55/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKK--YREAAMTEIDVLELLKRYDR 153
Y+ L+ +G G +G V +D TG VAIK + R + + + A E+ +L+ ++ +
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 154 SGSRCVQIRN-WFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
G V + D +V +G L ++ + D ++ + Q+L+ + +
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK---HEKLGEDRIQFLVYQMLKGLRY 143
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H +IH DLKP N+ VN + +K++DFG
Sbjct: 144 IHAAGIIHRDLKPGNLA---------------------VN------EDCELKILDFGLAR 176
Query: 273 YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
E V TR YRAPEVIL + ++ D+WSVGCI+ E+ +G+ LF+ ++L+ L
Sbjct: 177 QADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLK 236
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
+ +V G P ++R+ K +G LP L+ +
Sbjct: 237 EIMKVTGTPPAEFVQRLQSDEAKNYMKG-------------------LPELEKKDFASIL 277
Query: 392 HSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFF 424
+A L ++LL+ +L D R+TA +AL HP+F
Sbjct: 278 TNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 45/341 (13%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
S+Y+ L KIG+GTFG+V R+TG+ VA+K V + + A+ EI +L+LLK
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+ C + + + I +VF+ L L N F + ++ + + LL
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 134
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H +++H D+K N+L LK+ D+ + +
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA-------------------RAFS 175
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+ ++ N +V T YR PE++LG + P D+W GCI+ E+ + + Q +
Sbjct: 176 LAKNSQPNRYXNRVV-TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE 234
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
LA++ ++ G I + VD + + L + ++ +KA ++ P
Sbjct: 235 QHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP------ 286
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
Y +DL+ LL DP+ R+ + DAL H FF D
Sbjct: 287 ---------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 318
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
S+Y+ L KIG+GTFG+V R+TG+ VA+K V + + A+ EI +L+LLK
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+ C + + + I +VF+ L L N F + ++ + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H +++H D+K N+L LK+ D+ + AR+
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL-ARA-------------------- 174
Query: 268 FGSTAYEHQEHNYI--VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
S A Q + Y V T YR PE++LG + P D+W GCI+ E+ + + Q +
Sbjct: 175 -FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
LA++ ++ G I + VD + + L + ++ +KA ++ P
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP---- 287
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
Y +DL+ LL DP+ R+ + DAL H FF D
Sbjct: 288 -----------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 149/335 (44%), Gaps = 55/335 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
+Y+ L KIGEGT+G V +RET E VA+K VR + +A+ EI +L+ LK
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-- 60
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +VFE L + N P ++V+ QLL+ + F
Sbjct: 61 ---KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLKP+N+L LK+ ++ L ++ I V + +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLANFG--------------LARAFGIPVRCYSAE- 161
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
V T YR P+V+ G +S DMWS GCI EL +G LF ++ + L
Sbjct: 162 ---------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ R+LG P E+ WP T K P +LV V
Sbjct: 213 KRIFRLLG-----------TPTEE-------QWP-SMTKLPDYKPYPMYPATTSLV-NVV 252
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
DLLQ LL+ +P R++A +AL+HP+F+
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 154/343 (44%), Gaps = 49/343 (14%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV---RSIKKYREAAMTEIDVLELLKR 150
S+Y+ L KIG+GTFG+V R+TG+ VA+K V + + A+ EI +L+LLK
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 151 YDRSG--SRC-VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+ C + + + I +VF+ L L N F + ++ + + LL
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLL 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H +++H D+K N+L LK+ D+ + AR+
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGL-ARA-------------------- 174
Query: 268 FGSTAYEHQEHNYI--VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTH 324
S A Q + Y V T YR PE++LG + P D+W GCI+ E+ + + Q +
Sbjct: 175 -FSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
LA++ ++ G I + VD + + L + ++ +KA ++ P
Sbjct: 234 TEQHQLALISQLCGSITPEVWPNVDN--YELYEKLELVKGQKRKVKDRLKAYVRDP---- 287
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
Y +DL+ LL DP+ R+ + DAL H FF D
Sbjct: 288 -----------YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD 319
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 159/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK EI +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R + G SR+ + R + QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIEL--DPRFNDILGRHSRK------RWERFVHSENQHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/335 (29%), Positives = 148/335 (44%), Gaps = 55/335 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---SIKKYREAAMTEIDVLELLKRYD 152
+Y+ L KIGEGT+G V +RET E VA+K VR + +A+ EI +L+ LK
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-- 60
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +VFE L + N P ++V+ QLL+ + F
Sbjct: 61 ---KNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLGF 116
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLKP+N+L LK+ D+ L ++ I V + +
Sbjct: 117 CHSRNVLHRDLKPQNLLINRNGELKLADFG--------------LARAFGIPVRCYSAE- 161
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
V T YR P+V+ G +S DMWS GCI EL + LF ++ + L
Sbjct: 162 ---------VVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ R+LG P E+ WP T K P +LV V
Sbjct: 213 KRIFRLLG-----------TPTEE-------QWP-SMTKLPDYKPYPMYPATTSLV-NVV 252
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
DLLQ LL+ +P R++A +AL+HP+F+
Sbjct: 253 PKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFS 287
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 151/345 (43%), Gaps = 68/345 (19%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
+ L +Y+ L K+GEGT+G V D + G VA+K +R + T I + LLK
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
V + + + +VFE + L L +N ++ QLL V
Sbjct: 76 LHHPN--IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGV 132
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
A H R++H DLKP+N+L S LK+ D+ L ++ I V
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFG--------------LARAFGIPV----- 173
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+Y H+ V T YRAP+V++G +S D+WS+GCI E+ +G+ LF + +
Sbjct: 174 RSYTHE-----VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
L + +LG P P+ +WP+ V +LP + Q
Sbjct: 229 LPKIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTFQ 259
Query: 389 HVDHS------AGYL---IDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ G+ IDLL +L +DP+ R++A DA+ HP+F
Sbjct: 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 151/345 (43%), Gaps = 68/345 (19%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
+ L +Y+ L K+GEGT+G V D + G VA+K +R + T I + LLK
Sbjct: 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
V + + + +VFE + L L +N ++ QLL V
Sbjct: 76 LHHPN--IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQLLRGV 132
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
A H R++H DLKP+N+L S LK+ D+ L ++ I V
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFG--------------LARAFGIPV----- 173
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+Y H+ V T YRAP+V++G +S D+WS+GCI E+ +G+ LF + +
Sbjct: 174 RSYTHE-----VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQ 228
Query: 330 LAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
L + +LG P P+ +WP+ V +LP + Q
Sbjct: 229 LPKIFSILGTPNPR-------------------EWPQ----------VQELPLWKQRTFQ 259
Query: 389 HVDHS------AGYL---IDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ G+ IDLL +L +DP+ R++A DA+ HP+F
Sbjct: 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 48/329 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y L K+GEGT+ V + T VA+K +R ++ A T I + LLK D +
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIR-LEHEEGAPCTAIREVSLLK--DLKHA 60
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V + + + +VFE L L +L + + V+ QLL +A+ H
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
+++H DLKP+N+L LK+ D+ + AR+ K +P + Y+++
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGL-ARA-------KSIP-----------TKTYDNE 160
Query: 277 EHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
V T YR P+++LG +S DMW VGCI E+ +G LF E L + R
Sbjct: 161 -----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
+LG P E+ WP G S E K ++ H
Sbjct: 216 ILG-----------TPTEE-------TWP-GILSNEEFKTYNYPKYRAEALLSHAPRLDS 256
Query: 396 YLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DLL LL+++ +R++A DA+KHPFF
Sbjct: 257 DGADLLTKLLQFEGRNRISAEDAMKHPFF 285
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 153/339 (45%), Gaps = 84/339 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKY--REAAMTEIDVLELL 148
+ RYK R +G+G+FG+V+ C D+ TG+ A+KV+ R +K+ +E+ + E+ +LL
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREV---QLL 80
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K+ D ++ +F+ + + +V E+ G L+D + R VD R I RQ+L
Sbjct: 81 KQLDH--PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK-RFSEVDAARII-RQVL 136
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ + H +++H DLKPEN+L S K + I++ID
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESK------------------------SKDANIRIID 172
Query: 268 FG-STAYE-HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
FG ST +E ++ + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 173 FGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFN--- 228
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
G +LK+V+K F + P+ ES K
Sbjct: 229 ------------GANEYDILKKVEKGKYTF------ELPQWKKVSESAK----------- 259
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DL++ L Y PS R++A DAL H +
Sbjct: 260 -------------DLIRKXLTYVPSXRISARDALDHEWI 285
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 145/346 (41%), Gaps = 57/346 (16%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
++ RY L+ IGEG +G V D VAIK + + Y + + EI +L +
Sbjct: 40 DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ G R + + + + IV +++ LY L+ D + Q+L
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILRG 156
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H ++H DLKP N+L + + +K+ DFG
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINT---------------------------TCDLKICDFG 189
Query: 270 STAYEHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
EH++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 190 LARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
L+ L + +LG Q L + + ++ + S+ + P+
Sbjct: 250 GKHYLDQLNHILGILGSPSQEDLNCI-------INMKARNYLQSLPSKTKVAWAKLFPK- 301
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
S +DLL +L ++P+ R+T +AL HP+ + Y
Sbjct: 302 ----------SDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQYY 337
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 77/338 (22%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
RY I+ +G+G+FG+VL C DR T + A+KV+ + T + +ELLK+
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
D +++ + + IV E+ G L+D + K + F I +Q+ +
Sbjct: 79 DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGI 134
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
+MH ++H DLKPENIL S E K IK+IDFG
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGL 170
Query: 270 STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
ST ++ + + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF------- 222
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
G +LKRV+ F D P+ T + K
Sbjct: 223 --------YGKNEYDILKRVETGKYAF------DLPQWRTISDDAK-------------- 254
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
DL++ +L + PS R+TA L+HP+ +
Sbjct: 255 ----------DLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 77/338 (22%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
RY I+ +G+G+FG+VL C DR T + A+KV+ + T + +ELLK+
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
D +++ + + IV E+ G L+D + K + F I +Q+ +
Sbjct: 79 DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGI 134
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
+MH ++H DLKPENIL S E K IK+IDFG
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGL 170
Query: 270 STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
ST ++ + + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF------- 222
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
G +LKRV+ F D P+ T + K
Sbjct: 223 --------YGKNEYDILKRVETGKYAF------DLPQWRTISDDAK-------------- 254
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
DL++ +L + PS R+TA L+HP+ +
Sbjct: 255 ----------DLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 141/338 (41%), Gaps = 77/338 (22%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
RY I+ +G+G+FG+VL C DR T + A+KV+ + T + +ELLK+
Sbjct: 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
D +++ + + IV E+ G L+D + K + F I +Q+ +
Sbjct: 79 DHPN--IMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGI 134
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG- 269
+MH ++H DLKPENIL S E K IK+IDFG
Sbjct: 135 TYMHKHNIVHRDLKPENILLESKE------------------------KDCDIKIIDFGL 170
Query: 270 STAYEHQ-EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
ST ++ + + T +Y APEV+ G + CD+WS G IL L SG F
Sbjct: 171 STCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF------- 222
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
G +LKRV+ F D P+ T + K
Sbjct: 223 --------YGKNEYDILKRVETGKYAF------DLPQWRTISDDAK-------------- 254
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
DL++ +L + PS R+TA L+HP+ +
Sbjct: 255 ----------DLIRKMLTFHPSLRITATQCLEHPWIQK 282
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 152/340 (44%), Gaps = 53/340 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ + K+GEGT+G+V +D T ETVAIK +R + T I + LLK
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+++++ + + + ++FE L ++ KN + +++ QL+ V F H
Sbjct: 95 --IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHS 150
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG---STA 272
R +H DLKP+N+L V+ S T V +K+ DFG +
Sbjct: 151 RRCLHRDLKPQNLLL-----------SVSDASETPV-----------LKIGDFGLARAFG 188
Query: 273 YEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
++ + + T YR PE++LG +S D+WS+ CI E+ LF ++ L
Sbjct: 189 IPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLF 248
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV- 390
+ VLG +P WP G T+ K P+ + ++ V
Sbjct: 249 KIFEVLG-LPDDT-----------------TWP-GVTALPDWKQ--SFPKFRGKTLKRVL 287
Query: 391 -DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYY 429
+DLL +L DP R++A +AL+HP+F+ + +
Sbjct: 288 GALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 152/349 (43%), Gaps = 85/349 (24%)
Query: 83 GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAM 139
G ++ + +L+ Y+ ++K+G G +G+VL C D+ T AIK++R +
Sbjct: 25 GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 140 TEIDVLELLKRYDRSGSRCVQIRNWF-DYRNHICIVFEMLGPSLYD-FLRKNNYRPFPVD 197
E+ VL+LL +++ ++F D RN+ ++ G L+D + + +
Sbjct: 85 EEVAVLKLLDH-----PNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAA 139
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
+ I +Q+L V ++H ++H DLKPEN+L S E
Sbjct: 140 V---IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE----------------------- 173
Query: 258 PKSSAIKVIDFG-STAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
K + IK++DFG S +E+Q+ + T +Y APEV L + CD+WS+G IL L
Sbjct: 174 -KDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILL 231
Query: 316 SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKA 375
+G F G Q +L++V+K F D PE E K
Sbjct: 232 AGYPPFG---------------GQTDQEILRKVEKGKYTF------DSPEWKNVSEGAK- 269
Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DL++ +L++D R++A AL+HP+
Sbjct: 270 -----------------------DLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 72/348 (20%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R+++ R G+GTFG V ++ TG +VAIK V ++R + + L +L
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHH----- 78
Query: 156 SRCVQIRNWF------DYRN-HICIVFEMLGPSLYDFLRKNNYR----PFPVDLVREIGR 204
VQ++++F D R+ ++ +V E + +L+ R N YR P P+ L++
Sbjct: 79 PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCR-NYYRRQVAPPPI-LIKVFLF 136
Query: 205 QLLECVAFMH--DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
QL+ + +H + + H D+KP N+L +
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD--------------------------GT 170
Query: 263 IKVIDFGST-AYEHQEHNYI-VSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEA 319
+K+ DFGS E N + +R+YRAPE+I G ++ D+WSVGCI E+ GE
Sbjct: 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKP---AEKFVRRGRLDWPEGATSRESIKAV 376
+F+ + L + RVLG + +L++++ + + +G + W
Sbjct: 231 IFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG-IPW------------- 276
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
N+ H A DLL LL+Y P R+ ++AL HP+F
Sbjct: 277 ------SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYF 318
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 146/318 (45%), Gaps = 76/318 (23%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
+ +GEG+F C+ +++ + A+K++ K+ EI L+L + + V+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLCEGH----PNIVK 70
Query: 161 IRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
+ F + H +V E+L G L++ ++K + F I R+L+ V+ MHD+ ++
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVV 128
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
H DLKPEN+LF TD N + IK+IDFG + ++
Sbjct: 129 HRDLKPENLLF------------------TDEN------DNLEIKIIDFGFARLKPPDNQ 164
Query: 280 YIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE-NLEHLAMMER 335
+ + T HY APE++ G+ CD+WS+G IL + SG+ FQ+H+ +L + +E
Sbjct: 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE- 223
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
++K++ K F EG E+ K V + +
Sbjct: 224 --------IMKKIKKGDFSF---------EG----EAWKNVSQEAK-------------- 248
Query: 396 YLIDLLQGLLRYDPSSRL 413
DL+QGLL DP+ RL
Sbjct: 249 ---DLIQGLLTVDPNKRL 263
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 144/346 (41%), Gaps = 65/346 (18%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L +S +K+ DFG
Sbjct: 143 HSANVLHRDLKPSNLL---------------------------LNTTSDLKICDFGLARV 175
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ--- 383
L+ L H+L + P+++ + G + ++ +L LP
Sbjct: 236 LDQL-----------NHILGILGSPSQEDLNCG--------INLKARNYLLSLPHKNKVP 276
Query: 384 -NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
N + + D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 277 WNRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQYY 319
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 45/340 (13%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
++ RY L IGEG +G V D VAIK + + Y + + EI +L +
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ G + + + +V ++G LY L+ + D + Q+L
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRG 156
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H ++H DLKP N+L + LKI D+ + + D ++ L
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL------------ 204
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
T Y V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+
Sbjct: 205 -TEY--------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
L + +LG Q L + R L P K+P N +
Sbjct: 256 QLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFP 300
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 301 NADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 65/342 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
R + LR +G G +G V D + VA+K + R + A T E+ +L+ LK +
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 153 RSG-----SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
G + I ++ + + +V ++G L + ++ + + V+ + QLL
Sbjct: 89 VIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLL 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H +IH DLKP N+ VN + S ++++D
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVA---------------------VN------EDSELRILD 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
FG +E V+TR YRAPE++L + ++ D+WSVGCI+ EL G+ALF +
Sbjct: 175 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 327 LEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L +ME V P P+ + K + A +++ LP +
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 274
Query: 386 VMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+ + A L IDLL +L D R++A +AL H +F++
Sbjct: 275 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L + LKI D+ + + D ++ L T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+ L
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
+ +LG Q L + R L P K+P N + + D
Sbjct: 240 ILGILGSPSQEDLNXI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 108
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 109 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 201
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 202 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 262 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 299
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 110
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 111 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 169
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 170 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 203
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 204 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 263
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 264 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 301
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 302 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 342
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 147/342 (42%), Gaps = 82/342 (23%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLK 149
+ L+ RY+ ++K+G G +G+VL C D+ TG AIK++ +S + +D + +LK
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 150 RYDRSGSRCVQIRNWF-DYRNHICIVFEMLGPSLYD--FLRKNNYRPFPVDLVREIGRQL 206
+ D +++ +F D RN+ ++ G L+D LR+ F I +Q+
Sbjct: 77 QLDHPN--IMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVIMKQV 130
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L ++H ++H DLKPEN+L S + + IK++
Sbjct: 131 LSGTTYLHKHNIVHRDLKPENLLLESK------------------------SRDALIKIV 166
Query: 267 DFGSTAYEH--QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG +A+ + + T +Y APEV L + CD+WS G IL L G F
Sbjct: 167 DFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG-- 223
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
G Q +LKRV+K F D P+ + K ++KL
Sbjct: 224 -------------GQTDQEILKRVEKGKFSF------DPPDWTQVSDEAKQLVKL----- 259
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+L Y+PS R++A +AL HP+ +
Sbjct: 260 -------------------MLTYEPSKRISAEEALNHPWIVK 282
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 112
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 113 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 171
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 172 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 205
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 206 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 265
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 266 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 303
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 304 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 344
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 108
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 109 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 167
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 168 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 201
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 202 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 261
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 262 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 299
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 300 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 153
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 154 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 212
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 213 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 246
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 247 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 306
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 307 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 344
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 345 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 385
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L + LKI D+ + + D ++ L T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+ L
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
+ +LG Q L + R L P K+P N + + D
Sbjct: 240 ILGILGSPSQEDLNXI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 102
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 103 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 161
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 162 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 195
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 196 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 255
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 256 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 293
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 294 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 334
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 154/342 (45%), Gaps = 65/342 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
R + LR +G G +G V D + VA+K + R + A T E+ +L+ LK +
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 88
Query: 153 RSG-----SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
G + I ++ + + +V ++G L + ++ + + V+ + QLL
Sbjct: 89 VIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLL 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H +IH DLKP N+ VN + S ++++D
Sbjct: 142 RGLKYIHSAGIIHRDLKPSNVA---------------------VN------EDSELRILD 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
FG +E V+TR YRAPE++L + ++ D+WSVGCI+ EL G+ALF +
Sbjct: 175 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 234
Query: 327 LEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L +ME V P P+ + K + A +++ LP +
Sbjct: 235 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 274
Query: 386 VMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+ + A L IDLL +L D R++A +AL H +F++
Sbjct: 275 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 316
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L + LKI D+ + + D ++ L T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 191
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+ L
Sbjct: 192 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 243
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
+ +LG Q L + R L P K+P N + + D
Sbjct: 244 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 288
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 289 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 158/366 (43%), Gaps = 63/366 (17%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + ++ +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K + VR
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-----KKLQPTVRTYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
+ P+ A S E + + P +H A DLL +L D S R++ +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
+HP+
Sbjct: 317 QHPYIN 322
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 79
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 80 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 138
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 139 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 172
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 173 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 232
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 233 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 270
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 271 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 311
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 82/341 (24%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREAAMTEIDVLELLK 149
L+ RY+ ++K+G G +G+VL C D+ TG AIK+++ S+ + +D + +LK
Sbjct: 1 GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGAL-LDEVAVLK 59
Query: 150 RYDRSGSRCVQIRNWF-DYRNHICIVFEMLGPSLYD-FLRKNNYRPFPVDLVREIGRQLL 207
+ D +++ +F D RN+ ++ G L+D + + + + I +Q+L
Sbjct: 60 QLDH--PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV---IMKQVL 114
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
++H ++H DLKPEN+L S + + IK++D
Sbjct: 115 SGTTYLHKHNIVHRDLKPENLLLESK------------------------SRDALIKIVD 150
Query: 268 FGSTAYEH--QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
FG +A+ + + T +Y APEV L + CD+WS G IL L G F
Sbjct: 151 FGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG--- 206
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
G Q +LKRV+K F D P+ + K ++KL
Sbjct: 207 ------------GQTDQEILKRVEKGKFSF------DPPDWTQVSDEAKQLVKL------ 242
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+L Y+PS R++A +AL HP+ +
Sbjct: 243 ------------------MLTYEPSKRISAEEALNHPWIVK 265
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 56/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ L+ IG G G V D VAIK + + + A L L+K +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 156 SRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ + N F + + +V E++ +L ++ + + + Q+L
Sbjct: 85 --IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLXG 138
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ +H +IH DLKP NI+ S LKI D+ + + T F
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-----------------SFM 181
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 182 MTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 330 L-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL--QNLV 386
++E++ P P+ M K + VR + P+ A L P+L +L
Sbjct: 234 WNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKLFPDSLF 280
Query: 387 MQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 281 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 93
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 94 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 152
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 153 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 186
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 187 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 246
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 247 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 284
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 285 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 325
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 86
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 87 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 179
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 180 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 240 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 277
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 278 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 82
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 83 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 141
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 142 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 175
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 176 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 235
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 236 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 273
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 274 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 314
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 86
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 87 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 145
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 146 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 179
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 180 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 239
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 240 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 277
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 278 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 318
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 87
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 88 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 146
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 147 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 180
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 181 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 240
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 241 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 278
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 279 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 319
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENI 85
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 143 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 175
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 280
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 281 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLAQYY 319
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ L+ IG G G V D VAIK + + + A L L+K
Sbjct: 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 71
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
CV +N N + +V E++ +L ++ + + +
Sbjct: 72 --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLL 125
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 126 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-------------- 171
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 172 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ ++ ++E++ P P+ M K + VR + P+ A L P+L
Sbjct: 221 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 267
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 268 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 78
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 79 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 137
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 138 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 171
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 172 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 231
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 232 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 269
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 270 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 310
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ L+ IG G G V D VAIK + + + A L L+K
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 78
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
CV +N N + +V E++ +L ++ + + +
Sbjct: 79 --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLL 132
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 133 YQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-------------- 178
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 179 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ ++ ++E++ P P+ M K + VR + P+ A L P+L
Sbjct: 228 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 274
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 156/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + ++ +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
HP+
Sbjct: 318 HPYIN 322
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 75 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 75 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 75 -IVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 75
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 76 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 134
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 135 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 168
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 169 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 228
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 229 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 266
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 267 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 307
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 147/358 (41%), Gaps = 74/358 (20%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
+ RY+ L+ IG G G V D G VA+K + + + A L LLK
Sbjct: 19 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-- 76
Query: 152 DRSGSRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
CV +N N + +V E++ +L + + + +
Sbjct: 77 ------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----HMELDHERM 126
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAST---------- 176
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
+F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ EL G
Sbjct: 177 -------NFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSV 221
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRV---------DKPAEKFVRRGRLDWPEGATSR 370
+FQ ++++ + LG + + ++PA + L +P+
Sbjct: 222 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEEL-FPDWIFPS 280
Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
ES + +K + + DLL +L DP R++ +AL+HP+ T Y
Sbjct: 281 ESERDKIKTSQAR---------------DLLSKMLVIDPDKRISVDEALRHPYITVWY 323
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 138/338 (40%), Gaps = 84/338 (24%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDR 153
Y IL ++G G FG V C+++ TG K + + + KY EI ++ L
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLHH--- 107
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
+ + + + F+ + + ++ E L G L+D + +Y+ +++ + RQ E +
Sbjct: 108 --PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYM-RQACEGLKH 164
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
MH+ ++H D+KPENI+ K+S++K+IDFG
Sbjct: 165 MHEHSIVHLDIKPENIMC-------------------------ETKKASSVKIIDFGLAT 199
Query: 273 YEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
+ + +T + APE++ + DMW++G + L SG + F ++LE L
Sbjct: 200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL 259
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
++R DW + S+ K
Sbjct: 260 QNVKRC-------------------------DWEFDEDAFSSVSPEAK------------ 282
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
D ++ LL+ +P RLT HDAL+HP+ D+
Sbjct: 283 --------DFIKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L + LKI D+ + + D ++ L T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+ L
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
+ +LG Q L + R L P K+P N + + D
Sbjct: 240 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 145/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K+++ L+++++ D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 75 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L + LKI D+ + + D ++ L T Y
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFL-------------TEY 191
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+ L
Sbjct: 192 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 243
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
+ +LG Q L + R L P K+P N + + D
Sbjct: 244 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 288
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 289 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 56/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ L+ IG G G V D VAIK + + + A L L+K +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 156 SRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ + N F + + +V E++ +L ++ + + + Q+L
Sbjct: 85 --IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME----LDHERMSYLLYQMLCG 138
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ +H +IH DLKP NI+ S LKI D+ + + T F
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-----------------SFM 181
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 182 MTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 330 L-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL--QNLV 386
++E++ P P+ M K + VR + P+ A L P+L +L
Sbjct: 234 WNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKLFPDSLF 280
Query: 387 MQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 281 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 26 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 85
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 142
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 143 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 175
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 236 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 280
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 281 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 319
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 143/340 (42%), Gaps = 45/340 (13%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
++ RY L IGEG +G V D VAIK + + Y + + EI +L +
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 99
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ G + + + IV +++ LY L+ + D + Q+L
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRG 156
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H ++H DLKP N+L + LKI D+ + + D ++ L
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL------------ 204
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
T Y V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+
Sbjct: 205 -TEY--------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD 255
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
L + +LG Q L + R L P K+P N +
Sbjct: 256 QLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFP 300
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 301 NADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 337
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 65/339 (19%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K ++ L+++++ D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 75 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 168 GSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E A + K+ R
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTEFAFPQIKAHPWTKVFR---- 272
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ I L LL Y P++RLT +A H FF
Sbjct: 273 -----PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 148/342 (43%), Gaps = 56/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ L+ IG G G V D VAIK + + + A L L+K +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 156 SRCVQIRNWFDYR------NHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ + N F + + +V E++ +L ++ + + + Q+L
Sbjct: 85 --IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCG 138
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ +H +IH DLKP NI+ S LKI D+ + + T F
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGT-----------------SFM 181
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF + ++
Sbjct: 182 MTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ 233
Query: 330 L-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL--QNLV 386
++E++ P P+ M K + VR + P+ A L P+L +L
Sbjct: 234 WNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKLFPDSLF 280
Query: 387 MQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 281 PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 153/342 (44%), Gaps = 65/342 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMT--EIDVLELLKRYD 152
R + LR +G G +G V D + VA+K + R + A T E+ +L+ LK +
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN 80
Query: 153 RSG-----SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
G + I ++ + + +V ++G L + ++ + + V+ + QLL
Sbjct: 81 VIGLLDVFTPATSIEDF----SEVYLVTTLMGADLNNIVK---CQALSDEHVQFLVYQLL 133
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H +IH DLKP N+ VN + ++++D
Sbjct: 134 RGLKYIHSAGIIHRDLKPSNVA---------------------VN------EDCELRILD 166
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
FG +E V+TR YRAPE++L + ++ D+WSVGCI+ EL G+ALF +
Sbjct: 167 FGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDY 226
Query: 327 LEHLA-MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L +ME V P P+ + K + A +++ LP +
Sbjct: 227 IDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--------------------SLPPMPQK 266
Query: 386 VMQHVDHSAGYL-IDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+ + A L IDLL +L D R++A +AL H +F++
Sbjct: 267 DLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ 308
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 32 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 91
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 148
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L + LKI D+ + + D ++ L T Y
Sbjct: 149 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL-------------TEY 195
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+ L
Sbjct: 196 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 247
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
+ +LG Q L + R L P K+P N + + D
Sbjct: 248 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 292
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 293 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 325
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L + LKI D+ + + D ++ L T Y
Sbjct: 141 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFL-------------TEY 187
Query: 274 EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
V+TR YRAPE++L G++ D+WSVGCIL E+ S +F L+ L
Sbjct: 188 --------VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNH 239
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
+ +LG Q L + R L P K+P N + + D
Sbjct: 240 ILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRLFPNADS 284
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 285 KA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 144/341 (42%), Gaps = 69/341 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K ++ L+++++ D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 75 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E K P+++
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTE-----------FKFPQIKAH 265
Query: 386 VMQHV--DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
V + I L LL Y P++RLT +A H FF
Sbjct: 266 PWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 24 RYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 140
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 141 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 173
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 234 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 278
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 279 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 138
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 139 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 171
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 232 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 276
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 277 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 145 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 177
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 178 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 282
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 283 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 145
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 146 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 178
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 179 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 239 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 283
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 284 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 322
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 29 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 88
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 145
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 146 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 178
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 239 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 283
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 284 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 322
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 30 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 89
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 146
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 147 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 179
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 239
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 240 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 284
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 285 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 323
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 21 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 80
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 137
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 138 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 170
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 230
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 231 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 275
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 276 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 314
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 145 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 177
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 282
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 283 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
HP+
Sbjct: 318 HPYIN 322
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 145/357 (40%), Gaps = 72/357 (20%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
+ RY+ L+ IG G G V D G VA+K + + + A L LLK
Sbjct: 21 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-- 78
Query: 152 DRSGSRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
CV +N N + +V E++ +L + + + +
Sbjct: 79 ------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI----HMELDHERM 128
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACT---------- 178
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
+F T Y V TR+YRAPEVILG+G++ D+WSVGCI+ EL G
Sbjct: 179 -------NFMMTPY--------VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCV 223
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR--------RGRLDWPEGATSRE 371
+FQ ++++ + LG + + +V + +P+ E
Sbjct: 224 IFQGTDHIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSE 283
Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
S + +K + + DLL +L DP R++ +AL+HP+ T Y
Sbjct: 284 SERDKIKTSQAR---------------DLLSKMLVIDPDKRISVDEALRHPYITVWY 325
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 65/339 (19%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G+FG V ++GE VAIK V K ++ L+++++ D
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE------LQIMRKLDHCN- 74
Query: 157 RCVQIRNWFDYRN------HICIVFEMLGPSLYDFLR--KNNYRPFPVDLVREIGRQLLE 208
V++R +F ++ +V + + ++Y R + PV V+ QL
Sbjct: 75 -IVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFR 133
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+A++H + H D+KP+N+L P ++ +K+ DF
Sbjct: 134 SLAYIHSFGICHRDIKPQNLLLD--------------------------PDTAVLKLCDF 167
Query: 269 GSTA--YEHQEHNYIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILIELCSGEALFQTHE 325
GS + + + +R+YRAPE+I G ++ D+WS GC+L EL G+ +F
Sbjct: 168 GSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDS 227
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
++ L + +VLG P + +R ++ E A + K+ R
Sbjct: 228 GVDQLVEIIKVLG-----------TPTREQIREMNPNYTEFAFPQIKAHPWTKVFR---- 272
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ I L LL Y P++RLT +A H FF
Sbjct: 273 -----PRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 306
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAIK + + Y + + EI +L + +
Sbjct: 22 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENI 81
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 138
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 139 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 171
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 232 LDQLNHILGILGSPEQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 276
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 277 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 315
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 158/366 (43%), Gaps = 63/366 (17%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V+ D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + ++ +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVG I+ E+ G LF ++++ ++E++ P P+ M K + VR
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-----KKLQPTVRTYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
+ P+ A S E + + P +H A DLL +L D S R++ +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
+HP+
Sbjct: 317 QHPYIN 322
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ L+ IG G G V D VAIK + + + A L L+K
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 116
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
CV +N N + +V E++ +L ++ + + +
Sbjct: 117 --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 170
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 216
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 217 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ ++ ++E++ P P+ M K + VR + P+ A L P+L
Sbjct: 266 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 312
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 4 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 64 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 115
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 116 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 171
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 172 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 206
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 207 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 264
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 265 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318
Query: 421 HPFFT 425
HP+
Sbjct: 319 HPYIN 323
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 141/346 (40%), Gaps = 57/346 (16%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLK 149
++ RY L IGEG +G V D VAIK + + Y + + EI +L +
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR 83
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ G + + + IV +++ LY L+ + D + Q+L
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYFLYQILRG 140
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H ++H DLKP N+L L + +K+ DFG
Sbjct: 141 LKYIHSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFG 173
Query: 270 STAYEHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQ 322
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 174 LARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Query: 323 THENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
L+ L + +LG Q L + R L P K+P
Sbjct: 234 GKHYLDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP-- 278
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
N + + D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 279 WNRLFPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 147/348 (42%), Gaps = 68/348 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
RY+ L+ IG G G V D VAIK + + + A L L+K
Sbjct: 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 116
Query: 156 SRCVQIRNWFDYRN------------HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
CV +N N + +V E++ +L ++ + + +
Sbjct: 117 --CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 170
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 171 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 216
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 217 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ ++ ++E++ P P+ M K + VR + P+ A L P+L
Sbjct: 266 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 312
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 313 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 360
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
HP+
Sbjct: 318 HPYIN 322
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 57/342 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI--KKYREAAMTEIDVLELLKRYDR 153
RY L IGEG +G V D VAI+ + + Y + + EI +L + +
Sbjct: 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
G + + + IV +++ LY L+ + D + Q+L + ++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYI 144
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H ++H DLKP N+L L + +K+ DFG
Sbjct: 145 HSANVLHRDLKPSNLL---------------------------LNTTCDLKICDFGLARV 177
Query: 274 EHQEHNYI------VSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQTHEN 326
+H++ V+TR YRAPE++L G++ D+WSVGCIL E+ S +F
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
L+ L + +LG Q L + R L P K+P N +
Sbjct: 238 LDQLNHILGILGSPSQEDLNCI---INLKARNYLLSLPHKN----------KVP--WNRL 282
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
+ D A +DLL +L ++P R+ AL HP+ + Y
Sbjct: 283 FPNADSKA---LDLLDKMLTFNPHKRIEVEQALAHPYLEQYY 321
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 123/260 (47%), Gaps = 35/260 (13%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIK-KYREAAMTEIDVLELLKRYDRSGSRCVQI 161
+G G FGQV C + TG +A K++++ K +E EI V+ L + +Q+
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDH-----ANLIQL 151
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ F+ +N I +V E + G L+D + +Y +D + + +Q+ E + MH + ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM-KQICEGIRHMHQMYILH 210
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYEHQEHN 279
DLKPENIL V+ + + IK+IDFG + Y+ +E
Sbjct: 211 LDLKPENILCVNRD-------------------------AKQIKIIDFGLARRYKPREKL 245
Query: 280 YI-VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ T + APEV+ S+P DMWSVG I L SG + F + E L +
Sbjct: 246 KVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRW 305
Query: 339 PIPQHMLKRVDKPAEKFVRR 358
+ + + + A++F+ +
Sbjct: 306 DLEDEEFQDISEEAKEFISK 325
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI----D 143
RY+ L+ IG G G V D VAIK + + + YRE + + +
Sbjct: 24 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 83
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
++ LL + + + + +V E++ +L ++ + + +
Sbjct: 84 IISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 131
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 132 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 177
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 178 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 226
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ ++ ++E++ P P+ M K + VR + P+ A L P+L
Sbjct: 227 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 273
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 274 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 321
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI----D 143
RY+ L+ IG G G V D VAIK + + + YRE + + +
Sbjct: 25 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 84
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
++ LL + + + + +V E++ +L ++ + + +
Sbjct: 85 IISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 132
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 133 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 178
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 179 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 227
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ ++ ++E++ P P+ M K + VR + P+ A L P+L
Sbjct: 228 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 274
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 275 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 150/348 (43%), Gaps = 68/348 (19%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI----D 143
RY+ L+ IG G G V D VAIK + + + YRE + + +
Sbjct: 26 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKN 85
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG 203
++ LL + + + + +V E++ +L ++ + + +
Sbjct: 86 IISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLL 133
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 134 YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT-------------- 179
Query: 264 KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ + LF
Sbjct: 180 ---SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 228
Query: 324 HENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRL 382
+ ++ ++E++ P P+ M K + VR + P+ A L P+L
Sbjct: 229 RDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LTFPKL 275
Query: 383 --QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
+L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 276 FPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
+ RY+ L+ IG G G V D VAIK + + + YRE + +
Sbjct: 22 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 81
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
+++ LL + + + + +V E++ +L ++ + +
Sbjct: 82 NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 129
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 179
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ +
Sbjct: 180 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 224
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + ++ ++E++ P P+ M K + VR + P+ A L
Sbjct: 225 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 271
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
P+L +L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 272 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 323
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
+ RY+ L+ IG G G V D VAIK + + + YRE + +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
+++ LL + + + + +V E++ +L ++ + +
Sbjct: 75 NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 172
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ +
Sbjct: 173 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + ++ ++E++ P P+ M K + VR + P+ A L
Sbjct: 218 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 264
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
P+L +L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 265 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
+ RY+ L+ IG G G V D VAIK + + + YRE + +
Sbjct: 21 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 80
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
+++ LL + + + + +V E++ +L ++ + +
Sbjct: 81 NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 128
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 178
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ +
Sbjct: 179 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 223
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + ++ ++E++ P P+ M K + VR + P+ A L
Sbjct: 224 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 270
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
P+L +L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 271 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 322
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
HP+
Sbjct: 318 HPYIN 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
+ RY+ L+ IG G G V D VAIK + + + YRE + +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
+++ LL + + + + +V E++ +L ++ + +
Sbjct: 75 NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 172
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ +
Sbjct: 173 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 217
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + ++ ++E++ P P+ M K + VR + P+ A L
Sbjct: 218 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 264
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
P+L +L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 265 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 316
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
HP+
Sbjct: 318 HPYIN 322
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 134/339 (39%), Gaps = 80/339 (23%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLK 149
+++ Y I ++G G FG V +R TG A K V + + +E EI + +L+
Sbjct: 47 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 106
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
V + + F+ N + +++E M G L++ + + + D E RQ+ +
Sbjct: 107 H-----PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCK 160
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ MH+ +H DLKPENI+F + +S+ +K+IDF
Sbjct: 161 GLCHMHENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDF 195
Query: 269 GSTAY--EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
G TA+ Q T + APEV G Y DMWSVG + L SG + F +
Sbjct: 196 GLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND 255
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
E L ++ + + + + F+R+
Sbjct: 256 DETLRNVKSCDWNMDDSAFSGISEDGKDFIRK---------------------------- 287
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
LL DP++R+T H AL+HP+ T
Sbjct: 288 -----------------LLLADPNTRMTIHQALEHPWLT 309
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 151/352 (42%), Gaps = 68/352 (19%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
+ RY+ L+ IG G G V D VAIK + + + YRE + +
Sbjct: 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 73
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
+++ LL + + + + +V E++ +L ++ + +
Sbjct: 74 NHKNIISLLNVFTPQKT--------LEEFQDVYLVMELMDANLCQVIQME----LDHERM 121
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 171
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ +
Sbjct: 172 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + ++ ++E++ P P+ M K + VR + P+ A L
Sbjct: 217 LFPGRDYIDQWNKVIEQLGTPCPEFM-----KKLQPTVRNYVENRPKYAG--------LT 263
Query: 379 LPRL--QNLVMQHVDHS---AGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
P+L +L +H+ A DLL +L DP+ R++ DAL+HP+
Sbjct: 264 FPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYIN 315
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 157/366 (42%), Gaps = 63/366 (17%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + ++ +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGTS-----------------FMMTPY--------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVG I+ E+ G LF ++++ ++E++ P P+ M K + VR
Sbjct: 206 VDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-----KKLQPTVRTYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
+ P+ A S E + + P +H A DLL +L D S R++ +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
+HP+
Sbjct: 317 QHPYIN 322
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 131/333 (39%), Gaps = 80/333 (24%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSG 155
Y I ++G G FG V +R TG A K V + + +E EI + +L+
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH----- 213
Query: 156 SRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V + + F+ N + +++E M G L++ + + + D E RQ+ + + MH
Sbjct: 214 PTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
+ +H DLKPENI+F + +S+ +K+IDFG TA+
Sbjct: 273 ENNYVHLDLKPENIMFTT-------------------------KRSNELKLIDFGLTAHL 307
Query: 274 -EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
Q T + APEV G Y DMWSVG + L SG + F + E L
Sbjct: 308 DPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRN 367
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDH 392
++ + + + + F+R+
Sbjct: 368 VKSCDWNMDDSAFSGISEDGKDFIRK---------------------------------- 393
Query: 393 SAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
LL DP++R+T H AL+HP+ T
Sbjct: 394 -----------LLLADPNTRMTIHQALEHPWLT 415
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 5 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 64
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 65 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 116
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 117 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 172
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T + +P V TR+YRAPEVILG+G+
Sbjct: 173 GLARTAGTS---FMMVP----------------------FVVTRYYRAPEVILGMGYKEN 207
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 208 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 265
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 266 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 319
Query: 421 HPFFT 425
HP+
Sbjct: 320 HPYIN 324
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 154/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 8 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 67
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 68 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 119
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 120 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 175
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T F T Y V TR+YRAPEVILG+G+
Sbjct: 176 GLARTAGT-----------------SFMMTPY--------VVTRYYRAPEVILGMGYKEN 210
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ + LF + ++ ++E++ P P+ M K +P + R
Sbjct: 211 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 268
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 269 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 322
Query: 421 HPFFT 425
HP+
Sbjct: 323 HPYIN 327
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 155/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ + T + P+ V TR+YRAPEVILG+G+
Sbjct: 171 GLARTAGTS---FMMTPE----------------------VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ G LF ++++ ++E++ P P+ M K +P + R
Sbjct: 206 VDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNALKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
HP+
Sbjct: 318 HPYIN 322
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 158/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E VA+K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N+L + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVL-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 146/347 (42%), Gaps = 58/347 (16%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--------SIKKYREAAMTEI- 142
+ RY+ L+ IG G G V D VAIK + + + YRE + +
Sbjct: 15 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCV 74
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
+++ LL + S + + IV E++ +L ++ + +
Sbjct: 75 NHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDANLCQVIQME----LDHERM 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ Q+L + +H +IH DLKP NI+ S LKI D+ + + T
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT---------- 172
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
F T Y V TR+YRAPEVILG+G+ D+WSVGCI+ E+ +
Sbjct: 173 -------SFMMTPY--------VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKI 217
Query: 320 LFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLK 378
LF + ++ ++E++ P P+ M K +P + R + S E + +
Sbjct: 218 LFPGRDYIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENRPKY--AGYSFEKLFPDVL 273
Query: 379 LPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
P +H A DLL +L D S R++ +AL+HP+
Sbjct: 274 FPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 316
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 144/354 (40%), Gaps = 104/354 (29%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY------------REAAMTEI-- 142
Y++ IG+G F V C++RETG+ A+K+V + K+ REA++ +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 143 --DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
++ELL+ Y G + F++ + + FE++ + F+ + +
Sbjct: 85 HPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFV-------YSEAVAS 133
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
RQ+LE + + HD +IH D+KPEN+L S E S
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPENVLLASKE------------------------NS 169
Query: 261 SAIKVIDFGSTAYEHQEHNYI----VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ +K+ DFG A + E + V T H+ APEV+ + P D+W G IL L S
Sbjct: 170 APVKLGDFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
G L ER+ I IK
Sbjct: 229 G--------CLPFYGTKERLFEGI--------------------------------IKGK 248
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
K+ Q H+ SA DL++ +L DP+ R+T ++AL HP+ RD Y
Sbjct: 249 YKMNPRQ---WSHISESAK---DLVRRMLMLDPAERITVYEALNHPWLKERDRY 296
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 142/339 (41%), Gaps = 81/339 (23%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
+ L+ +++ ++G G V C + T + A+KV++ ++ TEI VL L
Sbjct: 49 DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRL-- 105
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
S ++++ F+ I +V E++ G L+D + + Y + + +Q+LE
Sbjct: 106 ---SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEA 160
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
VA++H+ ++H DLKPEN+L+ +P PD + +K+ DFG
Sbjct: 161 VAYLHENGIVHRDLKPENLLYATPA----PD--------------------APLKIADFG 196
Query: 270 -STAYEHQE-HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQTHEN 326
S EHQ + T Y APE++ G + DMWSVG I I LC E + +
Sbjct: 197 LSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD 256
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
Q M +R+ F+ W E + + +
Sbjct: 257 ---------------QFMFRRILNCEYYFISPW---WDEVSLNAK--------------- 283
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
DL++ L+ DP RLT AL+HP+ T
Sbjct: 284 ------------DLVRKLIVLDPKKRLTTFQALQHPWVT 310
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 149/363 (41%), Gaps = 86/363 (23%)
Query: 83 GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA- 137
G ++ + L Y + + +G G G+V +R+T + VAIK++ +I REA
Sbjct: 4 GSHMSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREAD 63
Query: 138 -AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
A+ +E+LK+ + ++I+N+FD ++ ++ M G L+D + N +
Sbjct: 64 PALNVETEIEILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKE 119
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
+ Q+L V ++H+ +IH DLKPEN+L S E
Sbjct: 120 ATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE---------------------- 157
Query: 257 LPKSSAIKVIDFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCIL 311
+ IK+ DFG + E + T Y APEV++ + G++ D WS+G IL
Sbjct: 158 --EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
Query: 312 IELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSR 370
SG F H R + + G+ ++ PE
Sbjct: 216 FICLSGYPPFSEH----------------------RTQVSLKDQITSGKYNFIPE----- 248
Query: 371 ESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
V V A +DL++ LL DP +R T +AL+HP+ D
Sbjct: 249 ---------------VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMK 290
Query: 430 RRF 432
R+F
Sbjct: 291 RKF 293
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 81/337 (24%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
++I+ ++G+G FG+V ++ET A KV+ + + E M EID+L
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH----- 93
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V++ + F Y N++ I+ E D + RP ++ + +Q L+ + ++HD
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++IH DLK NILF +K+ D+ V+A++ +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI------------------------ 189
Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
Q + + T ++ APEV++ + Y D+WS+G LIE+ E
Sbjct: 190 QRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP----------- 238
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
P H L ++ +LK+ + + +
Sbjct: 239 ----------PHHELN-------------------------PMRVLLKIAKSEPPTLAQP 263
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
+ D L+ L + +R T L+HPF T D
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 81/337 (24%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
++I+ ++G+G FG+V ++ET A KV+ + + E M EID+L
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH----- 93
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V++ + F Y N++ I+ E D + RP ++ + +Q L+ + ++HD
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++IH DLK NILF +K+ D+ V+A++ +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXI------------------------ 189
Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
Q + + T ++ APEV++ + Y D+WS+G LIE+ E
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP----------- 238
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
P H L ++ +LK+ + + +
Sbjct: 239 ----------PHHELN-------------------------PMRVLLKIAKSEPPTLAQP 263
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
+ D L+ L + +R T L+HPF T D
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/337 (21%), Positives = 133/337 (39%), Gaps = 81/337 (24%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSG 155
++I+ ++G+G FG+V ++ET A KV+ + + E M EID+L
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH----- 93
Query: 156 SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V++ + F Y N++ I+ E D + RP ++ + +Q L+ + ++HD
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++IH DLK NILF +K+ D+ V+A++ +
Sbjct: 154 NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI------------------------ 189
Query: 276 QEHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
Q + + T ++ APEV++ + Y D+WS+G LIE+ E
Sbjct: 190 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP----------- 238
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
P H L ++ +LK+ + + +
Sbjct: 239 ----------PHHELN-------------------------PMRVLLKIAKSEPPTLAQP 263
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
+ D L+ L + +R T L+HPF T D
Sbjct: 264 SRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 300
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
L Y + + +G G G+V +R+T + VAIK++ +I REA A+ +E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+LK+ + ++I+N+FD ++ ++ M G L+D + N + + Q+
Sbjct: 68 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L V ++H+ +IH DLKPEN+L S E + IK+
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 159
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
DFG + E + T Y APEV++ + G++ D WS+G IL SG F
Sbjct: 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
H R + + G+ ++ PE
Sbjct: 220 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 242
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
V V A +DL++ LL DP +R T +AL+HP+ D R+F
Sbjct: 243 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 155/362 (42%), Gaps = 83/362 (22%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMTEI------ 142
G +L SRY L+ +G G G V +D + + VAIK +V + + + A+ EI
Sbjct: 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 143 ---DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLV 199
+++++ + SGS+ N + IV E + L + L + P +
Sbjct: 66 DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHA 122
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPE--YLKIPDYKVTARSPTDVNYYKRL 257
R QLL + ++H ++H DLKP N LF++ E LKI D+ +
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPAN-LFINTEDLVLKIGDFGLA------------- 168
Query: 258 PKSSAIKVIDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC 315
+++D Y H+ H + + T+ YR+P ++L ++ DMW+ GCI E+
Sbjct: 169 ------RIMD---PHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 219
Query: 316 SGEALFQTHENLEHLAMM------------ERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
+G+ LF LE + ++ + +L IP ++ + +P + +
Sbjct: 220 TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQL----L 275
Query: 364 PEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
P SRE+ +D L+ +L + P RLTA +AL HP+
Sbjct: 276 P--GISREA-------------------------VDFLEQILTFSPMDRLTAEEALSHPY 308
Query: 424 FT 425
+
Sbjct: 309 MS 310
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
L Y + + +G G G+V +R+T + VAIK++ +I REA A+ +E
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+LK+ + ++I+N+FD ++ ++ M G L+D + N + + Q+
Sbjct: 67 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 122
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L V ++H+ +IH DLKPEN+L S E + IK+
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 158
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
DFG + E + T Y APEV++ + G++ D WS+G IL SG F
Sbjct: 159 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
H R + + G+ ++ PE
Sbjct: 219 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 241
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
V V A +DL++ LL DP +R T +AL+HP+ D R+F
Sbjct: 242 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 286
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
L Y + + +G G G+V +R+T + VAIK++ +I REA A+ +E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+LK+ + ++I+N+FD ++ ++ M G L+D + N + + Q+
Sbjct: 68 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L V ++H+ +IH DLKPEN+L S E + IK+
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 159
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
DFG + E + T Y APEV++ + G++ D WS+G IL SG F
Sbjct: 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
H R + + G+ ++ PE
Sbjct: 220 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 242
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
V V A +DL++ LL DP +R T +AL+HP+ D R+F
Sbjct: 243 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 145/353 (41%), Gaps = 86/353 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
L Y + + +G G G+V +R+T + VAIK++ +I REA A+ +E
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+LK+ + ++I+N+FD ++ ++ M G L+D + N + + Q+
Sbjct: 68 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L V ++H+ +IH DLKPEN+L S E + IK+
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 159
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
DFG + E + T Y APEV++ + G++ D WS+G IL SG F
Sbjct: 160 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW-PEGATSRESIKAVLKLP 380
H R + + G+ ++ PE
Sbjct: 220 SEH----------------------RTQVSLKDQITSGKYNFIPE--------------- 242
Query: 381 RLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
V V A +DL++ LL DP +R T +AL+HP+ D R+F
Sbjct: 243 -----VWAEVSEKA---LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 287
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--------EAAMTEIDVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + + M ++++LL
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLMGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 93 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 156/365 (42%), Gaps = 61/365 (16%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ AR+ T++ + V TR+YRAPEVILG+G+
Sbjct: 171 GL-ART---------------------AGTSFMMEPE---VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ + LF + ++ ++E++ P P+ M K +P + R
Sbjct: 206 VDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKL--QPTVRTYVENR 263
Query: 361 LDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALK 420
+ S E + + P +H A DLL +L D S R++ +AL+
Sbjct: 264 PKY--AGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEALQ 317
Query: 421 HPFFT 425
HP+
Sbjct: 318 HPYIN 322
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/366 (25%), Positives = 157/366 (42%), Gaps = 63/366 (17%)
Query: 77 RNDDKDGHYLFALGEN---LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---- 129
R+ + Y +G++ + RY+ L+ IG G G V D VAIK +
Sbjct: 3 RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 62
Query: 130 ----SIKKYREAAMTEI----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS 181
+ + YRE + + +++ LL + S + + IV E++ +
Sbjct: 63 NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS--------LEEFQDVYIVMELMDAN 114
Query: 182 LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
L ++ + + + Q+L + +H +IH DLKP NI+ S LKI D+
Sbjct: 115 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDF 170
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+ AR+ T++ + V TR+YRAPEVILG+G+
Sbjct: 171 GL-ART---------------------AGTSFMMEPE---VVTRYYRAPEVILGMGYKEN 205
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHL-AMMERVLGPIPQHMLKRVDKPAEKFVRRGR 360
D+WSVGCI+ E+ + LF + ++ ++E++ P P M K + VR
Sbjct: 206 VDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFM-----KKLQPTVRNYV 260
Query: 361 LDWPEGAT-SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
+ P+ A S E + + P +H A DLL +L D S R++ +AL
Sbjct: 261 ENRPKYAGYSFEKLFPDVLFPADS----EHNKLKASQARDLLSKMLVIDASKRISVDEAL 316
Query: 420 KHPFFT 425
+HP+
Sbjct: 317 QHPYIN 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 158/345 (45%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 54 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 113
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 114 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 157
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 158 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 191
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 192 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 251
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ + R++ E R S K LK
Sbjct: 252 DNHDQLVKIAKVLGT----------DGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMN 301
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 302 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 341
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 93 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 93 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 93 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLXGGPNIVKLL 93
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 94 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 137
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 171
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 172 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 231
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 232 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 281
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 282 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 93 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 34 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 93
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 94 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 137
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 138 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 171
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 172 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 231
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 232 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 281
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 282 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 321
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 84/352 (23%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
L Y + + +G G G+V +R+T + VAI+++ +I REA A+ +E
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+LK+ + ++I+N+FD ++ ++ M G L+D + N + + Q+
Sbjct: 207 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 262
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L V ++H+ +IH DLKPEN+L S E + IK+
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 298
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
DFG + E + T Y APEV++ + G++ D WS+G IL SG F
Sbjct: 299 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
H R + + G+ ++ + S KA
Sbjct: 359 SEH----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKA------ 390
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
+DL++ LL DP +R T +AL+HP+ D R+F
Sbjct: 391 ----------------LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 426
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 35 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 94
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 95 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 138
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 139 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 172
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 173 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 232
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 233 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 282
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 283 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 322
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 144/352 (40%), Gaps = 84/352 (23%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----SIKKYREA--AMTEIDVLE 146
L Y + + +G G G+V +R+T + VAI+++ +I REA A+ +E
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+LK+ + ++I+N+FD ++ ++ M G L+D + N + + Q+
Sbjct: 193 ILKKLNHPC--IIKIKNFFDAEDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQM 248
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L V ++H+ +IH DLKPEN+L S E + IK+
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQE------------------------EDCLIKIT 284
Query: 267 DFGSTAY--EHQEHNYIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILIELCSGEALF 321
DFG + E + T Y APEV++ + G++ D WS+G IL SG F
Sbjct: 285 DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
H R + + G+ ++ + S KA
Sbjct: 345 SEH----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKA------ 376
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYYRRF 432
+DL++ LL DP +R T +AL+HP+ D R+F
Sbjct: 377 ----------------LDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKF 412
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 160/345 (46%), Gaps = 72/345 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEI--------DVLELL 148
Y+++RK+G G + +V + ++ E IK+++ +KK + +I ++++LL
Sbjct: 33 YEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVKKKKIKREIKILQNLCGGPNIVKLL 92
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
S+ + F+Y N+ F++L P+L D+ +R +LL+
Sbjct: 93 DIVRDQHSKTPSL--IFEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLK 136
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ + H ++H D+KP N++ D+++ +++ID+
Sbjct: 137 ALDYCHSQGIMHRDVKPHNVMI---------DHEL-----------------RKLRLIDW 170
Query: 269 GSTAYEH--QEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELC-SGEALFQTH 324
G + H +E+N V++R+++ PE+++ L + Y DMWS+GC+ + E F H
Sbjct: 171 GLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGH 230
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP---EGATSRESIKAVLKLPR 381
+N + L + +VLG ++ ++ + R++ E R S K LK
Sbjct: 231 DNHDQLVKIAKVLGTDGLNV----------YLNKYRIELDPQLEALVGRHSRKPWLKFMN 280
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
N QH+ ID L LLRYD RLTA +A+ HP+F +
Sbjct: 281 ADN---QHLVSPEA--IDFLDKLLRYDHQERLTALEAMTHPYFQQ 320
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 91
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 148 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 181
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 242 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 291
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 292 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 91
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 92 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 147
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 148 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 181
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 182 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 241
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 242 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 291
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ +D L LLRYD SRLTA +A++HP+F
Sbjct: 292 --VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 37 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 90
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 91 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 146
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 147 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 180
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 241 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 290
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 291 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 322
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 44 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 97
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 98 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 153
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 154 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 187
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 188 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 247
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 248 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 297
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 298 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 329
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 157/334 (47%), Gaps = 54/334 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+ + + +VFE + + DF K Y+ +R ++L+ + + H
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILKALDYCH 148
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
+ ++H D+KP N++ + E+ K+ ++ID+G +
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAEFY 182
Query: 275 H--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLEHL 330
H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N + L
Sbjct: 183 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 242
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
+ +VLG + + +DK + R R S K + +N QH+
Sbjct: 243 VRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---QHL 292
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+D L LLRYD SRLTA +A++HP+F
Sbjct: 293 VSPEA--LDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 159/336 (47%), Gaps = 58/336 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y+++RK+G G + +V + ++ E V +K+++ +KK + + +LE L R G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIK--ILENL----RGGP 92
Query: 157 RCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKN--NYRPFPVDLVREIGRQLLECVAF 212
+ + + +VFE + + + LR+ +Y +R ++L+ + +
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQTLTDYD------IRFYMYEILKALDY 146
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H + ++H D+KP N++ + E+ K+ ++ID+G
Sbjct: 147 CHSMGIMHRDVKPHNVM-IDHEHRKL-------------------------RLIDWGLAE 180
Query: 273 YEH--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIELC-SGEALFQTHENLE 328
+ H QE+N V++R+++ PE+++ + Y DMWS+GC+L + E F H+N +
Sbjct: 181 FYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 240
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQ 388
L + +VLG + + +DK + R R S K + +N Q
Sbjct: 241 QLVRIAKVLGT--EDLYDYIDKYNIELDPRF-----NDILGRHSRKRWERFVHSEN---Q 290
Query: 389 HVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
H+ + +D L LLRYD SRLTA +A++HP+F
Sbjct: 291 HL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 121/297 (40%), Gaps = 52/297 (17%)
Query: 72 GTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI 131
G +R +D + HY +GE L G G F V C + TG+ A K ++
Sbjct: 1 GMSTFRQEDVEDHY--EMGEEL----------GSGQFAIVRKCRQKGTGKEYAAKFIKKR 48
Query: 132 K-------KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLY 183
+ RE E+++L ++ + + + F+ + + ++ E++ G L+
Sbjct: 49 RLSSSRRGVSREEIEREVNILREIRH-----PNIITLHDIFENKTDVVLILELVSGGELF 103
Query: 184 DFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV 243
DFL + D + +Q+L+ V ++H R+ H DLKPENI+ +
Sbjct: 104 DFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD----------- 150
Query: 244 TARSPTDVNYYKRLPKSSAIKVIDFGST--AYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
K +P + IK+IDFG E I T + APE++
Sbjct: 151 -----------KNVP-NPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE 198
Query: 302 CDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
DMWS+G I L SG + F E L + V + + A+ F+RR
Sbjct: 199 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 66 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 156 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 215 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 253
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 254 ------------------------LLVKDPKKRMTIQDSLQHPW 273
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 66 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 118
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 119 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 155
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 156 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 214
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 215 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 253
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 254 ------------------------LLVKDPKKRMTIQDSLQHPW 273
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 153/361 (42%), Gaps = 40/361 (11%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAA--MTEIDVLELLK 149
+ RY+I IG G++G V + D+ VAIK ++R + + + EI +L L
Sbjct: 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN 110
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL----VREIGRQ 205
+ I + + + +V E+ R PV L ++ +
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRT------PVYLTELHIKTLLYN 164
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV--TARSPTDVNYYKRL-PKSSA 262
LL V ++H ++H DLKP N L +K+ D+ + T P + N + P+
Sbjct: 165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCSGEALF 321
+ ++ F T ++ V TR YRAPE+IL ++ D+WS+GCI EL L
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL-----LN 279
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAE--KFVRRGRLDWPE------GATSRESI 373
EN+ + A + L K KF RG D G S E I
Sbjct: 280 MIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDI 339
Query: 374 KAVLK---------LPRLQNL-VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
+A+ K P+ + + + S+ I LL+ +L ++P+ R+T ++ L HPF
Sbjct: 340 EALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399
Query: 424 F 424
F
Sbjct: 400 F 400
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 130/344 (37%), Gaps = 87/344 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPW 274
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 130/345 (37%), Gaps = 87/345 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEID 143
EN+ Y ++G G F V C ++ TG A K ++ + RE E+
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+L+ ++ + + ++ + + ++ E++ G L+DFL + + E
Sbjct: 67 ILKEIQH-----PNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEF 119
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+L V ++H L++ H DLKPENI+ + + +PK
Sbjct: 120 LKQILNGVYYLHSLQIAHFDLKPENIMLLD----------------------RNVPKPR- 156
Query: 263 IKVIDFGSTAYE---HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
IK+IDFG A++ E I T + APE++ DMWS+G I L SG +
Sbjct: 157 IKIIDFG-LAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 215
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F E LA + V A+ F+RR
Sbjct: 216 PFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR--------------------- 254
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
LL DP R+T D+L+HP+
Sbjct: 255 ------------------------LLVKDPKKRMTIQDSLQHPWI 275
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 43/243 (17%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAM-TEIDVLELLKR 150
N+ + + +G G F +V R TG+ A+K ++ +R++++ EI VL+ +K
Sbjct: 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYD-FLRKNNYRPFPVDLVREIGRQLLE 208
V + + ++ H +V +++ G L+D L + Y LV + Q+L
Sbjct: 66 -----ENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLS 117
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H+ ++H DLKPEN+L+++PE ++S I + DF
Sbjct: 118 AVKYLHENGIVHRDLKPENLLYLTPE------------------------ENSKIMITDF 153
Query: 269 GSTAYEHQEHNYIVSTR----HYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQT 323
G + E N I+ST Y APEV+ +S D WS+G I I LC ++
Sbjct: 154 GLS---KMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210
Query: 324 HEN 326
E+
Sbjct: 211 TES 213
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 114/272 (41%), Gaps = 40/272 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEIDVLELLK 149
Y++ ++G G F V C + TG+ A K ++ + RE E+++L ++
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
+ + + F+ + + ++ E++ G L+DFL + D + +Q+L+
Sbjct: 88 H-----PNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILD 140
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H R+ H DLKPENI+ + K +P + IK+IDF
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDF 177
Query: 269 GST--AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
G E I T + APE++ DMWS+G I L SG + F
Sbjct: 178 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 237
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E L + V + + A+ F+RR
Sbjct: 238 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 269
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 115/272 (42%), Gaps = 40/272 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK-------KYREAAMTEIDVLELLK 149
Y++ ++G G F V C + TG+ A K ++ + RE E+++L ++
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
+ + + + F+ + + ++ E++ G L+DFL + D + +Q+L+
Sbjct: 67 HPN-----IITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILD 119
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H R+ H DLKPENI+ + K +P + IK+IDF
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLD----------------------KNVP-NPRIKLIDF 156
Query: 269 GST--AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
G E I T + APE++ DMWS+G I L SG + F
Sbjct: 157 GIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK 216
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E L + V + + A+ F+RR
Sbjct: 217 QETLTNISAVNYDFDEEYFSNTSELAKDFIRR 248
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 128/332 (38%), Gaps = 81/332 (24%)
Query: 103 IGE-GTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSGSRCVQ 160
IGE G FG+V ++ET A KV+ + + E M EID+L V+
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDH-----PNIVK 71
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + F Y N++ I+ E D + RP ++ + +Q L+ + ++HD ++IH
Sbjct: 72 LLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIH 131
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DLK NILF +K+ D+ V+A+ +T Q +
Sbjct: 132 RDLKAGNILFTLDGDIKLADFGVSAK-----------------------NTRTXIQRRDS 168
Query: 281 IVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMER 335
+ T ++ APEV++ + Y D+WS+G LIE+ E
Sbjct: 169 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEP---------------- 212
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG 395
P H L ++ +LK+ + + + +
Sbjct: 213 -----PHHELN-------------------------PMRVLLKIAKSEPPTLAQPSRWSS 242
Query: 396 YLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
D L+ L + +R T L+HPF T D
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD 274
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 109/243 (44%), Gaps = 43/243 (17%)
Query: 89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELL 148
+G+ + RYKI+ K+G G V D VAIK + + +E E L
Sbjct: 5 IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKE---------ETL 55
Query: 149 KRYDR--------SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLV 199
KR++R S V + + + + +V E + GP+L +++ ++ P VD
Sbjct: 56 KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTA 113
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
Q+L+ + HD+R++H D+KP+NIL S + LKI D+ + K L +
Sbjct: 114 INFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIA----------KALSE 163
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
+S + N+++ T Y +PE G D++S+G +L E+ GE
Sbjct: 164 TSLTQT-------------NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 320 LFQ 322
F
Sbjct: 211 PFN 213
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 141/354 (39%), Gaps = 104/354 (29%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY------------REAAMTEI-- 142
Y++ IG+G F V C++RETG+ A+K+V + K+ REA++ +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 143 --DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
++ELL+ Y G + F++ + + FE++ + F+ + +
Sbjct: 87 HPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFV-------YSEAVAS 135
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
RQ+LE + + HD +IH D+KP +L S E S
Sbjct: 136 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NS 171
Query: 261 SAIKVIDFGSTAYEHQEHNYI----VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ +K+ FG A + E + V T H+ APEV+ + P D+W G IL L S
Sbjct: 172 APVKLGGFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 230
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
G L ER+ I IK
Sbjct: 231 G--------CLPFYGTKERLFEGI--------------------------------IKGK 250
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
K+ Q H+ SA DL++ +L DP+ R+T ++AL HP+ RD Y
Sbjct: 251 YKMNPRQ---WSHISESAK---DLVRRMLMLDPAERITVYEALNHPWLKERDRY 298
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 94/342 (27%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G++ + C+ + T A+KV I K + EI E+L RY +
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEI---EILLRYGQH-P 81
Query: 157 RCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLV-REIGRQLLECVAFM 213
+ +++ +D H+ +V E++ G L LR+ + V IG+ V ++
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 214 HDLRLIHTDLKPENILFV----SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
H ++H DLKP NIL+V +PE L+I DFG
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRI---------------------------CDFG 170
Query: 270 STAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
E+ +++ T ++ APEV+ G+ CD+WS+G +L + +G F
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--- 227
Query: 327 LEHLAMMERVLGP--IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
GP P+ +L R+ + KF G +W T E+ K
Sbjct: 228 -----------GPSDTPEEILTRIG--SGKFTLSGG-NW---NTVSETAK---------- 260
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
DL+ +L DP RLTA L+HP+ T+
Sbjct: 261 --------------DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 139/342 (40%), Gaps = 94/342 (27%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y + IG G++ + C+ + T A+KV I K + EI E+L RY +
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKV---IDKSKRDPSEEI---EILLRYGQH-P 81
Query: 157 RCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLV-REIGRQLLECVAFM 213
+ +++ +D H+ +V E++ G L LR+ + V IG+ V ++
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGK----TVEYL 137
Query: 214 HDLRLIHTDLKPENILFV----SPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
H ++H DLKP NIL+V +PE L+I DFG
Sbjct: 138 HSQGVVHRDLKPSNILYVDESGNPECLRI---------------------------CDFG 170
Query: 270 STAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
E+ +++ T ++ APEV+ G+ CD+WS+G +L + +G F
Sbjct: 171 FAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFAN--- 227
Query: 327 LEHLAMMERVLGP--IPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
GP P+ +L R+ + KF G +W T E+ K
Sbjct: 228 -----------GPSDTPEEILTRIG--SGKFTLSGG-NW---NTVSETAK---------- 260
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
DL+ +L DP RLTA L+HP+ T+
Sbjct: 261 --------------DLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 141/354 (39%), Gaps = 104/354 (29%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY------------REAAMTEI-- 142
Y++ IG+G F V C++RETG+ A+K+V + K+ REA++ +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 143 --DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVR 200
++ELL+ Y G + F++ + + FE++ + F+ + +
Sbjct: 85 HPHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFV-------YSEAVAS 133
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
RQ+LE + + HD +IH D+KP +L S E S
Sbjct: 134 HYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE------------------------NS 169
Query: 261 SAIKVIDFGSTAYEHQEHNYI----VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ +K+ FG A + E + V T H+ APEV+ + P D+W G IL L S
Sbjct: 170 APVKLGGFG-VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 317 GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAV 376
G L ER+ I IK
Sbjct: 229 G--------CLPFYGTKERLFEGI--------------------------------IKGK 248
Query: 377 LKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT-RDYY 429
K+ Q H+ SA DL++ +L DP+ R+T ++AL HP+ RD Y
Sbjct: 249 YKMNPRQ---WSHISESAK---DLVRRMLMLDPAERITVYEALNHPWLKERDRY 296
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 101/223 (45%), Gaps = 32/223 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
+ +L K+GEG++G V + +ETG+ VAIK V ++ + + EI +++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVESDLQEIIKEISIMQQC-----DSP 84
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V+ + + IV E G S+ D +R N + D + I + L+ + ++H
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN-KTLTEDEIATILQSTLKGLEYLHF 143
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+R IH D+K NIL + + K+ D+ V G
Sbjct: 144 MRKIHRDIKAGNILLNTEGHAKLADFGVA------------------------GQLTDXM 179
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
+ N ++ T + APEVI +G++ D+WS+G IE+ G+
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGK 222
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 33 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 81
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 82 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 142 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 177
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 178 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 236
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
L I M R +R G+ ++P S S + +
Sbjct: 237 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 270
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 271 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 298
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 136/342 (39%), Gaps = 82/342 (23%)
Query: 93 LTSRYKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
+T Y++ +++ G G G+VL+C R TG+ A+K++ K R+ E+D +
Sbjct: 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD-----HHW 76
Query: 152 DRSGS-RCVQIRNWFDYRNH----ICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
SG V I + ++ +H + I+ E M G L+ +++ + F EI R
Sbjct: 77 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 136
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
+ + F+H + H D+KPEN+L+ S E K + +K+
Sbjct: 137 IGTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKL 172
Query: 266 IDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG Q T +Y APEV+ + CDMWS+G I+ L G
Sbjct: 173 TDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG------- 225
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
P + + + ++ +R G+ +P N
Sbjct: 226 ------------FPPFYSNTGQAISPGMKRRIRLGQYGFP-------------------N 254
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
V A LI L LL+ DP+ RLT + HP+ +
Sbjct: 255 PEWSEVSEDAKQLIRL---LLKTDPTERLTITQFMNHPWINQ 293
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 159/365 (43%), Gaps = 83/365 (22%)
Query: 73 TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK 132
P W N D Y+++RK+G G + +V + ++ E V +K+++ +K
Sbjct: 36 VPSWGNQDD---------------YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK 80
Query: 133 KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNN 190
K + E+ +LE L R G+ +++ + +VFE + + DF K
Sbjct: 81 K--KKIKREVKILENL----RGGTNIIKLIDTVKDPVSKTPALVFEYINNT--DF--KQL 130
Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Y+ +R +LL+ + + H ++H D+KP N++
Sbjct: 131 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH------------------ 172
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSV 307
+ +++ID+G + H QE+N V++R+++ PE+++ + Y DMWS+
Sbjct: 173 --------QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 224
Query: 308 GCILIELC-SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE- 365
GC+L + E F +N + L + +VLG + ++++ +D
Sbjct: 225 GCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT----------EELYGYLKKYHIDLDPH 274
Query: 366 -----GATSRESIKAVLKLPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDAL 419
G SR+ R +N + H +DLL LLRYD RLTA +A+
Sbjct: 275 FNDILGQHSRK---------RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAM 325
Query: 420 KHPFF 424
+HP+F
Sbjct: 326 EHPYF 330
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 159/365 (43%), Gaps = 83/365 (22%)
Query: 73 TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK 132
P W N D Y+++RK+G G + +V + ++ E V +K+++ +K
Sbjct: 31 VPSWGNQDD---------------YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVK 75
Query: 133 KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNN 190
K + E+ +LE L R G+ +++ + +VFE + + DF K
Sbjct: 76 K--KKIKREVKILENL----RGGTNIIKLIDTVKDPVSKTPALVFEYINNT--DF--KQL 125
Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Y+ +R +LL+ + + H ++H D+KP N++
Sbjct: 126 YQILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDH------------------ 167
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSV 307
+ +++ID+G + H QE+N V++R+++ PE+++ + Y DMWS+
Sbjct: 168 --------QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSL 219
Query: 308 GCILIELC-SGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE- 365
GC+L + E F +N + L + +VLG + ++++ +D
Sbjct: 220 GCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT----------EELYGYLKKYHIDLDPH 269
Query: 366 -----GATSRESIKAVLKLPRLQNLVMQHVDHSAG-YLIDLLQGLLRYDPSSRLTAHDAL 419
G SR+ R +N + H +DLL LLRYD RLTA +A+
Sbjct: 270 FNDILGQHSRK---------RWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAM 320
Query: 420 KHPFF 424
+HP+F
Sbjct: 321 EHPYF 325
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
Y I ++G G F V C ++ TG A K ++ + RE E+ +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++ + + + ++ R + ++ E++ G L+DFL + + +Q+L+
Sbjct: 74 HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H ++ H DLKPENI+ + + IP IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
G A+E + E I T + APE++ DMWS+G I L SG + F
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E LA + V + + + A+ F+R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 127/297 (42%), Gaps = 57/297 (19%)
Query: 87 FALGENLTSRYKILRK-IGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEI 142
F EN + Y + K +G G F V C+ + TG+ A K ++ ++ R + EI
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIV---------FEMLGPSLYDFLRKNNYRP 193
VLEL K S R + + ++ + I ++ F + P L + + +N
Sbjct: 80 AVLELAK----SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN---- 131
Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
D++R I +Q+LE V ++H ++H DLKP+NIL S L
Sbjct: 132 ---DVIRLI-KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPL----------------- 170
Query: 254 YKRLPKSSAIKVIDFGST-----AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVG 308
IK++DFG + A E +E I+ T Y APE++ + DMW++G
Sbjct: 171 -------GDIKIVDFGMSRKIGHACELRE---IMGTPEYLAPEILNYDPITTATDMWNIG 220
Query: 309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE 365
I L + + F +N E + +V + V + A F++ + PE
Sbjct: 221 IIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPE 277
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 93/344 (27%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 69 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 117
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 118 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 177
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 178 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 213
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 214 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 272
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
L I M R +R G+ ++ PE + E +K
Sbjct: 273 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 306
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 307 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 333
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 42/273 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
Y I ++G G F V C ++ TG A K ++ + RE E+ +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++ + + + ++ R + ++ E++ G L+DFL + + +Q+L+
Sbjct: 74 HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H ++ H DLKPENI+ + + IP IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
G A+E + E I T + APE++ DMWS+G I L SG + F
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E LA + V + + + A+ F+R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 93/344 (27%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 111
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 171
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 207
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 208 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
L I M R +R G+ ++ PE + E +K
Sbjct: 267 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 300
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 301 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 327
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 136/342 (39%), Gaps = 82/342 (23%)
Query: 93 LTSRYKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
+T Y++ +++ G G G+VL+C R TG+ A+K++ K R+ E+D +
Sbjct: 7 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD-----HHW 57
Query: 152 DRSGS-RCVQIRNWFDYRNH----ICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
SG V I + ++ +H + I+ E M G L+ +++ + F EI R
Sbjct: 58 QASGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRD 117
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
+ + F+H + H D+KPEN+L+ S E K + +K+
Sbjct: 118 IGTAIQFLHSHNIAHRDVKPENLLYTSKE------------------------KDAVLKL 153
Query: 266 IDFGSTAYEHQEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG Q T +Y APEV+ + CDMWS+G I+ L G
Sbjct: 154 TDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG------- 206
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
P + + + ++ +R G+ +P N
Sbjct: 207 ------------FPPFYSNTGQAISPGMKRRIRLGQYGFP-------------------N 235
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
V A LI L LL+ DP+ RLT + HP+ +
Sbjct: 236 PEWSEVSEDAKQLIRL---LLKTDPTERLTITQFMNHPWINQ 274
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 65
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 161
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 162 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
L I M R +R G+ ++P S S + +
Sbjct: 221 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 254
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 255 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 282
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
Y I ++G G F V C ++ TG A K ++ + RE E+ +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++ + + + ++ R + ++ E++ G L+DFL + + +Q+L+
Sbjct: 74 HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H ++ H DLKPENI+ + + IP IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
G A+E + E I T + APE++ DMWS+G I L SG + F
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E LA + V + + A+ F+R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 25 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 73
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 74 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 133
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 134 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 169
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 170 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 228
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
L I M R +R G+ ++P S S + +
Sbjct: 229 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 262
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 263 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 290
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 141/344 (40%), Gaps = 93/344 (27%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 67
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 163
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 164 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
L I M R +R G+ ++ PE + E +K
Sbjct: 223 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 256
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 257 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 141/345 (40%), Gaps = 93/345 (26%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 18 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 66
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 67 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 126
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 127 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 162
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 163 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
L I M R +R G+ ++ PE + E +K
Sbjct: 222 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 255
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 256 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 283
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
Y I ++G G F V C ++ TG A K ++ + RE E+ +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++ + + + ++ R + ++ E++ G L+DFL + + +Q+L+
Sbjct: 74 HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H ++ H DLKPENI+ + + IP IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
G A+E + E I T + APE++ DMWS+G I L SG + F
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E LA + V + + A+ F+R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK-------YREAAMTEIDVLELLK 149
Y I ++G G F V C ++ TG A K ++ + RE E+ +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++ + + + ++ R + ++ E++ G L+DFL + + +Q+L+
Sbjct: 74 HHN-----VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H ++ H DLKPENI+ + + IP IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
G A+E + E I T + APE++ DMWS+G I L SG + F
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E LA + V + + A+ F+R+
Sbjct: 223 KQETLANITSVSYDFDEEFFSHTSELAKDFIRK 255
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 141/345 (40%), Gaps = 93/345 (26%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 24 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 72
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 73 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 132
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 133 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 168
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 169 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 227
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
L I M R +R G+ ++ PE + E +K
Sbjct: 228 HGLA-----------ISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 261
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 262 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 289
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 140/343 (40%), Gaps = 89/343 (25%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 23 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 71
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 72 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 131
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 132 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 167
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 168 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 226
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
L I M R +R G+ ++P S S + +
Sbjct: 227 HGLA-----------ISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 260
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 261 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQS 288
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 140/342 (40%), Gaps = 89/342 (26%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 67
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 163
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 164 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 222
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
L I M R +R G+ ++P S S + +
Sbjct: 223 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 256
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 257 ---------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 283
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 140/344 (40%), Gaps = 93/344 (27%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 17 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 65
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 66 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 125
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 126 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 161
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG A E HN + T +Y APEV+ + CDMWS+G I+ L G F ++
Sbjct: 162 FG-FAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 220
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRL 382
L I M R +R G+ ++ PE + E +K
Sbjct: 221 HGL-----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM------- 254
Query: 383 QNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 255 -----------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 281
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 135/358 (37%), Gaps = 96/358 (26%)
Query: 87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR---------SIKKYREA 137
+A + +Y IG G V C+ R TG A+K++ +++ REA
Sbjct: 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREA 145
Query: 138 AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV 196
E +L R + + + ++ + + +VF+++ L+D+L +
Sbjct: 146 TRRETHIL----RQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSE 199
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
R I R LLE V+F+H ++H DLKPENIL
Sbjct: 200 KETRSIMRSLLEAVSFLHANNIVHRDLKPENIL--------------------------- 232
Query: 257 LPKSSAIKVIDFGSTAYEH--QEHNYIVSTRHYRAPEVI------LGLGWSYPCDMWSVG 308
L + I++ DFG + + ++ + T Y APE++ G+ D+W+ G
Sbjct: 233 LDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACG 292
Query: 309 CILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGAT 368
IL L +G F + L M+ E + +W
Sbjct: 293 VILFTLLAGSPPFWHRRQILMLRMI------------------MEGQYQFSSPEW----- 329
Query: 369 SRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
D + + DL+ LL+ DP +RLTA AL+HPFF R
Sbjct: 330 ----------------------DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 93/341 (27%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV----------RSIKKYREAAMTEIDVLELLKRYD 152
+G G V C+ + T + A+K++ +++ REA + E+D+L R
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL----RKV 80
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+Q+++ ++ +VF+++ L+D+L + R+I R LLE +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 138
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+H L ++H DLKPENIL +K+ D+ + + +D G
Sbjct: 139 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDPGEK 179
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILIELCSGEALFQTHE 325
E + T Y APE+I G+ DMWS G I+ L +G F +
Sbjct: 180 LRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 233
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
+ ML+ + +F G +W
Sbjct: 234 QM---------------LMLRMIMSGNYQF---GSPEW---------------------- 253
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
D + + DL+ L P R TA +AL HPFF +
Sbjct: 254 -----DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 143/360 (39%), Gaps = 81/360 (22%)
Query: 102 KIGEGTFGQVLD------------CLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK 149
K+G GT+G V L + G +++ R I RE + +V+ L K
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRE--LKHPNVISLQK 85
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP--FPVDLVREIGRQLL 207
+ R V + FDY H ++ + K N +P P +V+ + Q+L
Sbjct: 86 VFLSHADRKVWL--LFDYAEH-----DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ + ++H ++H DLKP NIL + P+ +K+ D
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMG-----------------------EGPERGRVKIAD 175
Query: 268 ------FGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEAL 320
F S + + +V T YRAPE++LG ++ D+W++GCI EL + E +
Sbjct: 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPI 235
Query: 321 FQTHE------NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW------PEGAT 368
F + N H ++R+ + PA+K DW PE +T
Sbjct: 236 FHCRQEDIKTSNPYHHDQLDRIFN--------VMGFPADK-------DWEDIKKMPEHST 280
Query: 369 SRESI-KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
+ + L + +H LLQ LL DP R+T+ A++ P+F D
Sbjct: 281 LMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 132/340 (38%), Gaps = 75/340 (22%)
Query: 88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLEL 147
+GE + +K+ +G+G+F V TG VAIK++ Y+ A M + E+
Sbjct: 5 CIGEKIED-FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQRVQNEV 62
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+++ N+F+ N++ +V EM + KN +PF + R Q++
Sbjct: 63 KIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII 122
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H ++H DL N+L +KI D+ + + ++P
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQ--------LKMP--------- 165
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
H++H + T +Y +PE+ D+WS+GC+ L G F T
Sbjct: 166 -------HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT---- 214
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
+ V + + +L + P S SI+A
Sbjct: 215 ------DTVKNTLNKVVLADYEMP-----------------SFLSIEAK----------- 240
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LLR +P+ RL+ L HPF +R+
Sbjct: 241 -----------DLIHQLLRRNPADRLSLSSVLDHPFMSRN 269
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 130/341 (38%), Gaps = 93/341 (27%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV----------RSIKKYREAAMTEIDVLELLKRYD 152
+G G V C+ + T + A+K++ +++ REA + E+D+L R
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL----RKV 67
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+Q+++ ++ +VF+++ L+D+L + R+I R LLE +
Sbjct: 68 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 125
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+H L ++H DLKPENIL +K+ D+ + + +D G
Sbjct: 126 ALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ-------------------LDPGEK 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILIELCSGEALFQTHE 325
E + T Y APE+I G+ DMWS G I+ L +G F +
Sbjct: 167 LRE------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK 220
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
+ ML+ + +F G +W
Sbjct: 221 QM---------------LMLRMIMSGNYQF---GSPEW---------------------- 240
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
D + + DL+ L P R TA +AL HPFF +
Sbjct: 241 -----DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 139/342 (40%), Gaps = 83/342 (24%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELL 148
+ L Y++ IG G F +V TGE VAIK++ ++ TEI+ L+ L
Sbjct: 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNL 65
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+ Q+ + + N I +V E G L+D++ + + R + RQ++
Sbjct: 66 RH-----QHICQLYHVLETANKIFMVLEYCPGGELFDYIISQD--RLSEEETRVVFRQIV 118
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
VA++H H DLKPEN+LF LK+ D+ + A+ + +Y+ +
Sbjct: 119 SAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTC--------- 169
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHEN 326
GS AY APE+I G + D+WS+G +L L G F ++
Sbjct: 170 CGSLAYA--------------APELIQGKSYLGSEADVWSMGILLYVLMCG---FLPFDD 212
Query: 327 LEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLV 386
+A+ ++++ RG+ D P+ +
Sbjct: 213 DNVMALYKKIM--------------------RGKYDVPKWLSPSS--------------- 237
Query: 387 MQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
I LLQ +L+ DP R++ + L HP+ +DY
Sbjct: 238 -----------ILLLQQMLQVDPKKRISMKNLLNHPWIMQDY 268
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 103/224 (45%), Gaps = 37/224 (16%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR-EAAMTEIDV-LELLKRYDRSGSRC 158
RK+G G FG V +R +G +V+++I K R + M +I+ +E+LK D
Sbjct: 28 RKLGSGAFGDVHLVEERSSGLE---RVIKTINKDRSQVPMEQIEAEIEVLKSLDHPN--I 82
Query: 159 VQIRNWF-DYRNHICIVFEMLGPSLYDFLRKNNYR--PFPVDLVREIGRQLLECVAFMHD 215
++I F DY N ++ G L + + R V E+ +Q++ +A+ H
Sbjct: 83 IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYE 274
++H DLKPENILF SP S IK+IDFG + ++
Sbjct: 143 QHVVHKDLKPENILF-------------QDTSP-----------HSPIKIIDFGLAELFK 178
Query: 275 HQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
EH+ T Y APEV ++ CD+WS G ++ L +G
Sbjct: 179 SDEHSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 134/342 (39%), Gaps = 83/342 (24%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELL 148
++T Y++ IG+G F V C+ TG A K++ + K + + E + LL
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K S V++ + +VF+++ G L++ + Y D I +Q+L
Sbjct: 61 KH-----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS-EADASHCI-QQIL 113
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E V H + ++H DLKPEN+L S K +A+K+ D
Sbjct: 114 EAVLHCHQMGVVHRDLKPENLLLASK------------------------CKGAAVKLAD 149
Query: 268 FG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG + Q T Y +PEV+ + P D+W+ G IL L G F
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDE 209
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ QH L + ++ G D+P + P +N
Sbjct: 210 D----------------QHKLYQQ-------IKAGAYDFPSPEWDTVT-------PEAKN 239
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
L+ Q +L +P+ R+TAH+ALKHP+ +
Sbjct: 240 LINQ---------------MLTINPAKRITAHEALKHPWVCQ 266
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 116/273 (42%), Gaps = 42/273 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-------REAAMTEIDVLELLK 149
Y I ++G G F V C ++ TG A K ++ + RE E+ +L +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
+ + + + ++ R + ++ E++ G L+DFL + + +Q+L+
Sbjct: 74 HPN-----IITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILD 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V ++H ++ H DLKPENI+ + + IP IK+IDF
Sbjct: 127 GVNYLHTKKIAHFDLKPENIMLLDKN-IPIPH----------------------IKLIDF 163
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
G A+E + E I T + APE++ DMWS+G I L SG + F
Sbjct: 164 G-LAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT 222
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
E LA + V + + + A+ F+R+
Sbjct: 223 KQETLANITAVSYDFDEEFFSQTSELAKDFIRK 255
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 131/343 (38%), Gaps = 97/343 (28%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV----------RSIKKYREAAMTEIDVLELLKRYD 152
+G G V C+ + T + A+K++ +++ REA + E+D+L R
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL----RKV 80
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+Q+++ ++ +VF+++ L+D+L + R+I R LLE +
Sbjct: 81 SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVIC 138
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+H L ++H DLKPENIL D+N IK+ DFG +
Sbjct: 139 ALHKLNIVHRDLKPENILL-----------------DDDMN----------IKLTDFGFS 171
Query: 272 AY--EHQEHNYIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILIELCSGEALFQT 323
++ + T Y APE+I G+ DMWS G I+ L +G F
Sbjct: 172 CQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH 231
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
+ + ML+ + +F G +W
Sbjct: 232 RKQM---------------LMLRMIMSGNYQF---GSPEW-------------------- 253
Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
D + + DL+ L P R TA +AL HPFF +
Sbjct: 254 -------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 120/300 (40%), Gaps = 64/300 (21%)
Query: 69 AQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV 128
Q+G P +N D LF L KIG+G+FG+V +D T + VAIK++
Sbjct: 6 VQSGLPGMQNLKADPEELFTK----------LEKIGKGSFGEVFKGIDNRTQKVVAIKII 55
Query: 129 --RSIKKYREAAMTEIDVLE------LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP 180
+ E EI VL + K Y GS + W I+ E LG
Sbjct: 56 DLEEAEDEIEDIQQEITVLSQCDSPYVTKYY---GSYLKDTKLW--------IIMEYLGG 104
Query: 181 -SLYDFLRKNNYRPFPVD--LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLK 237
S D L P P+D + I R++L+ + ++H + IH D+K N+L +K
Sbjct: 105 GSALDLLE-----PGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVK 159
Query: 238 IPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG 297
+ D+ V + TD + N V T + APEVI
Sbjct: 160 LADFGVAGQL-TDTQI-----------------------KRNXFVGTPFWMAPEVIKQSA 195
Query: 298 WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
+ D+WS+G IEL GE H L + ++ + P + KP ++FV
Sbjct: 196 YDSKADIWSLGITAIELARGEP---PHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVE 252
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 129/338 (38%), Gaps = 78/338 (23%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
T Y++ IG G++ C+ + T A+K++ K+ + +E+L RY
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRY 72
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ + +++ +D ++ +V E++ G L D + + + F + + + V
Sbjct: 73 GQH-PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTV 129
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H ++H DLKP NIL+V +I++ DFG
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGF 166
Query: 271 TAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
E+ +++ T ++ APEV+ G+ CD+WS+G +L + +G F
Sbjct: 167 AKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFAN---- 222
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
GP D P E R G + S+ K
Sbjct: 223 ----------GPD--------DTPEEILARIGSGKFSLSGGYWNSVSDTAK--------- 255
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
DL+ +L DP RLTA L+HP+
Sbjct: 256 -----------DLVSKMLHVDPHQRLTAALVLRHPWIV 282
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 48/255 (18%)
Query: 70 QNG--TPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKV 127
+NG + W+ +D +F E L G G F +V+ ++ TG+ A+K
Sbjct: 5 ENGESSSSWKKQAEDIKKIFEFKETL----------GTGAFSEVVLAEEKATGKLFAVKC 54
Query: 128 V--RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYD 184
+ +++K + EI VL +K V + + ++ NH+ +V +++ G L+D
Sbjct: 55 IPKKALKGKESSIENEIAVLRKIKH-----ENIVALEDIYESPNHLYLVMQLVSGGELFD 109
Query: 185 FLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
+ + + + + RQ+L+ V ++H + ++H DLKPEN+L+ S +
Sbjct: 110 RIVEKGF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQD---------- 157
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPC 302
+ S I + DFG + E + + T Y APEV+ +S
Sbjct: 158 --------------EESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAV 203
Query: 303 DMWSVGCILIELCSG 317
D WS+G I L G
Sbjct: 204 DCWSIGVIAYILLCG 218
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 94/227 (41%), Gaps = 45/227 (19%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE-----LLKRYD 152
L +IG+G+FG+V +D T E VAIK++ + E EI VL + RY
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY- 82
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
GS + W I+ E LG S D L+ P + I R++L+ +
Sbjct: 83 -FGSYLKSTKLW--------IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLD 130
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H R IH D+K N+L +K+ D+ V G
Sbjct: 131 YLHSERKIHRDIKAANVLLSEQGDVKLADFGVA------------------------GQL 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
+ N V T + APEVI + + D+WS+G IEL GE
Sbjct: 167 TDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
Y+I++ +GEG+FG+V TG+ VA+K++ K ++ M EI L LL+
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 72
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+++ + ++ I +V E G L+D++ + + R +Q++ V
Sbjct: 73 ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H +++H DLKPEN+L +KI D+ ++ TD N+ K GS
Sbjct: 127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 175
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
Y E ++S + Y PEV D+WS G IL + LC S LF+
Sbjct: 176 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 222
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
N + + + L P ++KR+
Sbjct: 223 NISN--GVYTLPKFLSPGAAGLIKRM 246
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
Y+I++ +GEG+FG+V TG+ VA+K++ K ++ M EI L LL+
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 73
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+++ + ++ I +V E G L+D++ + + R +Q++ V
Sbjct: 74 ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H +++H DLKPEN+L +KI D+ ++ TD N+ K GS
Sbjct: 128 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 176
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
Y E ++S + Y PEV D+WS G IL + LC S LF+
Sbjct: 177 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 223
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
N + + + L P ++KR+
Sbjct: 224 NISN--GVYTLPKFLSPGAAGLIKRM 247
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++I+ ++G+G FG+V ++ETG A KV+ + K E I +E+L D
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP-- 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + + + I+ E D + R ++ + RQ+LE + F+H
Sbjct: 69 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R+IH DLK N+L +++ D+ V+A++ +K + Q
Sbjct: 129 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN---------------LKTL---------Q 164
Query: 277 EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGE 318
+ + + T ++ APEV++ + Y D+WS+G LIE+ E
Sbjct: 165 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 33/227 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++I+ ++G+G FG+V ++ETG A KV+ + K E I +E+L D
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIET--KSEEELEDYIVEIEILATCDHP-- 76
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + + + I+ E D + R ++ + RQ+LE + F+H
Sbjct: 77 YIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK 136
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
R+IH DLK N+L +++ D+ V+A++ +K + Q
Sbjct: 137 RIIHRDLKAGNVLMTLEGDIRLADFGVSAKN---------------LKTL---------Q 172
Query: 277 EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGE 318
+ + + T ++ APEV++ + Y D+WS+G LIE+ E
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
Y+I++ +GEG+FG+V TG+ VA+K++ K ++ M EI L LL+
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 67
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+++ + ++ I +V E G L+D++ + + R +Q++ V
Sbjct: 68 ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 121
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H +++H DLKPEN+L +KI D+ ++ TD N+ K GS
Sbjct: 122 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 170
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
Y E ++S + Y PEV D+WS G IL + LC S LF+
Sbjct: 171 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 217
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
N + + + L P ++KR+
Sbjct: 218 NISN--GVYTLPKFLSPGAAGLIKRM 241
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 120/266 (45%), Gaps = 48/266 (18%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELLKRY 151
Y+I++ +GEG+FG+V TG+ VA+K++ K ++ M EI L LL+
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK-KVLAKSDMQGRIEREISYLRLLRH- 63
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+++ + ++ I +V E G L+D++ + + R +Q++ V
Sbjct: 64 ----PHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVE 117
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H +++H DLKPEN+L +KI D+ ++ TD N+ K GS
Sbjct: 118 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLS-NIMTDGNFLKT----------SCGSP 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-IELC--------SGEALFQ 322
Y E ++S + Y PEV D+WS G IL + LC S LF+
Sbjct: 167 NYAAPE---VISGKLYAGPEV----------DVWSCGVILYVMLCRRLPFDDESIPVLFK 213
Query: 323 THENLEHLAMMERVLGPIPQHMLKRV 348
N + + + L P ++KR+
Sbjct: 214 NISN--GVYTLPKFLSPGAAGLIKRM 237
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 152/373 (40%), Gaps = 77/373 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR---EAAMTEIDVLELLKR-YD 152
Y+I IG G++G V D+ + VAIK V + + + + EI +L LK Y
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL----VREIGRQLLE 208
+ + + + + IV E+ L + P+ L V+ I LL
Sbjct: 90 IRLHDLIIPEDLLKF-DELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLL 142
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV--TARSPTDVNYYKRLPKSSAIKVI 266
F+H+ +IH DLKP N L +KI D+ + T S D++ L + +
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCS--------- 316
+ + Q +++V TR YRAPE+IL ++ D+WS GCI EL +
Sbjct: 203 GPHNKNLKKQLTSHVV-TRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNP 261
Query: 317 --------GEALF---------QTHE--NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
G + F + HE N + L ++ V+G P+ LK +
Sbjct: 262 TNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCI--------- 312
Query: 358 RGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYL------IDLLQGLLRYDPSS 411
T +E IK + P +D S Y IDLL+ +LR++
Sbjct: 313 ----------TKQEVIKYIKLFP-----TRDGIDLSKKYSSISKEGIDLLESMLRFNAQK 357
Query: 412 RLTAHDALKHPFF 424
R+T AL HP+
Sbjct: 358 RITIDKALSHPYL 370
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
E++ Y +G G F +V+ D+ T + VAIK + + + +E +M EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+K V + + ++ H+ ++ +++ G L+D + + + D R I Q+
Sbjct: 73 IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L+ V ++HDL ++H DLKPEN+L+ S L + S I +
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG + E + T Y APEV+ +S D WS+G I L G F
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ + + E++L K +F D P +S K
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
D ++ L+ DP R T AL+HP+ D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 141/353 (39%), Gaps = 59/353 (16%)
Query: 86 LFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-------RSIKKYREA- 137
L A + S Y + R I G++G V +D E G VAIK V R++ ++
Sbjct: 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSF 71
Query: 138 ----AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP 193
+ EI +L + G R + + + + +V E++ L +
Sbjct: 72 LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
P ++ +L + +H+ ++H DL P NIL + I D+ + D N
Sbjct: 132 SP-QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN- 189
Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILI 312
+ V+ R YRAPE+++ G++ DMWS GC++
Sbjct: 190 ------------------------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA 225
Query: 313 ELCSGEALFQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE 371
E+ + +ALF+ L + V+G P + ++ A ++R + P
Sbjct: 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP------- 278
Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
R V+ D A +DL+ +L ++P R++ AL+HP+F
Sbjct: 279 --------ARAWTAVVPTADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 141/353 (39%), Gaps = 59/353 (16%)
Query: 86 LFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVV-------RSIKKYREA- 137
L A + S Y + R I G++G V +D E G VAIK V R++ ++
Sbjct: 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSF 71
Query: 138 ----AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRP 193
+ EI +L + G R + + + + +V E++ L +
Sbjct: 72 LCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVI 131
Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
P ++ +L + +H+ ++H DL P NIL + I D+ + D N
Sbjct: 132 SP-QHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADAN- 189
Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILI 312
+ V+ R YRAPE+++ G++ DMWS GC++
Sbjct: 190 ------------------------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMA 225
Query: 313 ELCSGEALFQTHENLEHLAMMERVLG-PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRE 371
E+ + +ALF+ L + V+G P + ++ A ++R + P
Sbjct: 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVP------- 278
Query: 372 SIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
R V+ D A +DL+ +L ++P R++ AL+HP+F
Sbjct: 279 --------ARAWTAVVPTADPVA---LDLIAKMLEFNPQRRISTEQALRHPYF 320
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
E++ Y +G G F +V+ D+ T + VAIK + + + +E +M EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+K V + + ++ H+ ++ +++ G L+D + + + D R I Q+
Sbjct: 73 IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L+ V ++HDL ++H DLKPEN+L+ S L + S I +
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG + E + T Y APEV+ +S D WS+G I L G F
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ + + E++L K +F D P +S K
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
D ++ L+ DP R T AL+HP+ D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 157/366 (42%), Gaps = 66/366 (18%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR---EAAMTEIDVLELLKRYDR 153
Y I IG G++G V D+ T + VAIK V + + + + EI +L LK
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE----IGRQLLEC 209
+ I + + + IV E+ L + P+ L E I LL
Sbjct: 88 IRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLLG 141
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV--TARSPTDVNYYKRLPKSSAIKVID 267
F+H+ +IH DLKP N L +K+ D+ + T S D N L ++
Sbjct: 142 ENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGP-- 199
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILIELCS---------- 316
+ + Q +++V TR YRAPE+IL ++ D+WS GCI EL +
Sbjct: 200 -HNKNLKKQLTSHVV-TRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPT 257
Query: 317 -------GEALF---------QTHE--NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
G + F + HE N + L ++ ++G + LK ++KP + ++
Sbjct: 258 NRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKP--EVIKY 315
Query: 359 GRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDA 418
+L +P R+ I K P + + G I+LL+ +L+++P+ R+T A
Sbjct: 316 IKL-FPH----RKPINLKQKYPSISD---------DG--INLLESMLKFNPNKRITIDQA 359
Query: 419 LKHPFF 424
L HP+
Sbjct: 360 LDHPYL 365
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 131/326 (40%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
KIGEG+ G V R +G+ VA+K + K+ R E+ E++ D V++
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 136
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
N + + + +V E L G +L D + + + + +L+ ++ +H +IH
Sbjct: 137 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 193
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K ++IL +K+ D+ A+ +V K L
Sbjct: 194 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 230
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
V T ++ APE+I L + D+WS+G ++IE+ GE + L+ + M+
Sbjct: 231 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 282
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
R + P PRL+NL V S L
Sbjct: 283 -------------------RDNLP---------------PRLKNL--HKVSPS---LKGF 303
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
L LL DP+ R TA + LKHPF +
Sbjct: 304 LDRLLVRDPAQRATAAELLKHPFLAK 329
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 142/354 (40%), Gaps = 94/354 (26%)
Query: 83 GHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR------------- 129
G Y+ + Y +RK+G G +G+VL C ++ AIKV++
Sbjct: 24 GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 130 -SIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR 187
+I+K+ E EI +L+ L +++ + F+ + + +V E G L++ +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDH-----PNIIKLFDVFEDKKYFYLVTEFYEGGELFEQII 138
Query: 188 KNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS 247
N F I +Q+L + ++H ++H D+KPENIL + L
Sbjct: 139 --NRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSL----------- 185
Query: 248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMW 305
IK++DFG +++ +++ + T +Y APEV L ++ CD+W
Sbjct: 186 -------------LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVW 231
Query: 306 SVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE 365
S G I+ L G F G Q ++K+V+K F D+ +
Sbjct: 232 SCGVIMYILLCGYPPFG---------------GQNDQDIIKKVEKGKYYF------DFND 270
Query: 366 GATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDAL 419
+ K ++KL +L YD + R TA +AL
Sbjct: 271 WKNISDEAKELIKL------------------------MLTYDYNKRCTAEEAL 300
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
E++ Y +G G F +V+ D+ T + VAIK + + + +E +M EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+K V + + ++ H+ ++ +++ G L+D + + + D R I Q+
Sbjct: 73 IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L+ V ++HDL ++H DLKPEN+L+ S L + S I +
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG + E + T Y APEV+ +S D WS+G I L G F
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ + + E++L K +F D P +S K
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
D ++ L+ DP R T AL+HP+ D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 137/343 (39%), Gaps = 81/343 (23%)
Query: 90 GENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAM-TEIDVLEL 147
E++ Y +G G F +V+ D+ T + VAIK + + + +E +M EI VL
Sbjct: 13 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+K V + + ++ H+ ++ +++ G L+D + + + D R I Q+
Sbjct: 73 IKH-----PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYT-ERDASRLI-FQV 125
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L+ V ++HDL ++H DLKPEN+L+ S L + S I +
Sbjct: 126 LDAVKYLHDLGIVHRDLKPENLLYYS------------------------LDEDSKIMIS 161
Query: 267 DFGSTAYEHQEH--NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG + E + T Y APEV+ +S D WS+G I L G F
Sbjct: 162 DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDE 221
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ + + E++L K +F D P +S K
Sbjct: 222 NDAK---LFEQIL------------KAEYEF------DSPYWDDISDSAK---------- 250
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
D ++ L+ DP R T AL+HP+ D
Sbjct: 251 --------------DFIRHLMEKDPEKRFTCEQALQHPWIAGD 279
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
KIGEG+ G V R +G+ VA+K + K+ R E+ E++ D V++
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 213
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
N + + + +V E L G +L D + + + + +L+ ++ +H +IH
Sbjct: 214 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIH 270
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K ++IL +K+ D+ A+ +V K L
Sbjct: 271 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 307
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
V T ++ APE+I L + D+WS+G ++IE+ GE + L+ + M+
Sbjct: 308 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 359
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
R + P PRL+NL + L
Sbjct: 360 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 380
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
L LL DP+ R TA + LKHPF +
Sbjct: 381 LDRLLVRDPAQRATAAELLKHPFLAK 406
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 132/324 (40%), Gaps = 78/324 (24%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
KIGEG+ G V ++ TG+ VA+K + K+ R E+ E++ D V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR----ELLFNEVVIMRDYHHDNVVDM 107
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + + + +V E L G +L D + + + + +L ++++H+ +IH
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIH 164
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K ++IL S +K+ D+ A+ +V K L
Sbjct: 165 RDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL----------------------- 201
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
V T ++ APEVI L + D+WS+G ++IE+ GE +
Sbjct: 202 -VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY------------------- 241
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
++P + +RR R P + +VL+ G+L DL
Sbjct: 242 -------FNEPPLQAMRRIRDSLPPRVKDLHKVSSVLR----------------GFL-DL 277
Query: 401 LQGLLRYDPSSRLTAHDALKHPFF 424
+L +PS R TA + L HPF
Sbjct: 278 ---MLVREPSQRATAQELLGHPFL 298
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y KIG+G G V +D TG+ VAI+ + ++ E+ + E+L +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 76
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V + + + + +V E L G SL D + + + + R+ L+ + F+H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLH 133
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
++IH D+K +NIL L ++K+ DFG A
Sbjct: 134 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 166
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
E + + +V T ++ APEV+ + D+WS+G + IE+ GE + L L
Sbjct: 167 TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 332 MM 333
++
Sbjct: 227 LI 228
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
KIGEG+ G V R +G+ VA+K + K+ R E+ E++ D V++
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 93
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
N + + + +V E L G +L D + + + + +L+ ++ +H +IH
Sbjct: 94 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 150
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K ++IL +K+ D+ A+ +V K L
Sbjct: 151 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 187
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
V T ++ APE+I L + D+WS+G ++IE+ GE + L+ + M+
Sbjct: 188 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 239
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
R + P PRL+NL + L
Sbjct: 240 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 260
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
L LL DP+ R TA + LKHPF +
Sbjct: 261 LDRLLVRDPAQRATAAELLKHPFLAK 286
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 111/269 (41%), Gaps = 54/269 (20%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
L KIG+G+FG+V +D T + VAIK++ + E EI VL + K Y
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVD--LVREIGRQLLE 208
GS + W I+ E LG S D L P P+D + I R++L+
Sbjct: 72 ---GSYLKDTKLW--------IIMEYLGGGSALDLLE-----PGPLDETQIATILREILK 115
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H + IH D+K N+L +K+ D+ V + TD
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL-TDTQI--------------- 159
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
+ N V T + APEVI + D+WS+G IEL GE H L
Sbjct: 160 --------KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELH 208
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
+ ++ + P + KP ++FV
Sbjct: 209 PMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y KIG+G G V +D TG+ VAI+ + ++ E+ + E+L +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 76
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V + + + + +V E L G SL D + + + + R+ L+ + F+H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE---GQIAAVCRECLQALEFLH 133
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
++IH D+K +NIL L ++K+ DFG A
Sbjct: 134 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 166
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
E + + +V T ++ APEV+ + D+WS+G + IE+ GE + L L
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 332 MM 333
++
Sbjct: 227 LI 228
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
KIGEG+ G V R +G+ VA+K + K+ R E+ E++ D V++
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 86
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
N + + + +V E L G +L D + + + + +L+ ++ +H +IH
Sbjct: 87 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 143
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K ++IL +K+ D+ A+ +V K L
Sbjct: 144 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
V T ++ APE+I L + D+WS+G ++IE+ GE +
Sbjct: 181 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY------------------- 220
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
++P K ++ R + P PRL+NL + L
Sbjct: 221 -------FNEPPLKAMKMIRDNLP---------------PRLKNL-----HKVSPSLKGF 253
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
L LL DP+ R TA + LKHPF +
Sbjct: 254 LDRLLVRDPAQRATAAELLKHPFLAK 279
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 134/344 (38%), Gaps = 85/344 (24%)
Query: 91 ENL--TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVL 145
ENL S Y++ ++G+G F V C+ G+ A K++ + K + + E +
Sbjct: 16 ENLYFQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARIC 75
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGR 204
LLK V++ + H ++F+++ G L++ + Y D I +
Sbjct: 76 RLLKH-----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS-EADASHCI-Q 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+LE V H + ++H DLKPEN+L S K +A+K
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASK------------------------LKGAAVK 164
Query: 265 VIDFG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
+ DFG E Q T Y +PEV+ + P D+W+ G IL L G F
Sbjct: 165 LADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
Query: 322 QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
+ QH L + ++ G D+P + +A
Sbjct: 225 WDED----------------QHRLYQQ-------IKAGAYDFPSPEWDTVTPEAK----- 256
Query: 382 LQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
DL+ +L +PS R+TA +ALKHP+ +
Sbjct: 257 -----------------DLINKMLTINPSKRITAAEALKHPWIS 283
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 54/269 (20%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
L KIG+G+FG+V +D T + VAIK++ + E EI VL + K Y
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVD--LVREIGRQLLE 208
GS + W I+ E LG S D L P P+D + I R++L+
Sbjct: 72 ---GSYLKDTKLW--------IIMEYLGGGSALDLLE-----PGPLDETQIATILREILK 115
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H + IH D+K N+L +K+ D+ V
Sbjct: 116 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------ 151
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
G + N V T + APEVI + D+WS+G IEL GE H L
Sbjct: 152 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELH 208
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
+ ++ + P + KP ++FV
Sbjct: 209 PMKVLFLIPKNNPPTLEGNYSKPLKEFVE 237
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 104/242 (42%), Gaps = 38/242 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y KIG+G G V +D TG+ VAI+ + ++ E+ + E+L +
Sbjct: 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 76
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V + + + + +V E L G SL D + + + V R+ L+ + F+H
Sbjct: 77 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 133
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
++IH D+K +NIL L ++K+ DFG A
Sbjct: 134 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 166
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
E + + +V T ++ APEV+ + D+WS+G + IE+ GE + L L
Sbjct: 167 TPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY 226
Query: 332 MM 333
++
Sbjct: 227 LI 228
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
KIGEG+ G V R +G+ VA+K + K+ R E+ E++ D V++
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 91
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
N + + + +V E L G +L D + + + + +L+ ++ +H +IH
Sbjct: 92 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 148
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K ++IL +K+ D+ A+ +V K L
Sbjct: 149 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 185
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
V T ++ APE+I L + D+WS+G ++IE+ GE + L+ + M+
Sbjct: 186 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI------- 237
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
R + P PRL+NL + L
Sbjct: 238 -------------------RDNLP---------------PRLKNL-----HKVSPSLKGF 258
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
L LL DP+ R TA + LKHPF +
Sbjct: 259 LDRLLVRDPAQRATAAELLKHPFLAK 284
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 109/269 (40%), Gaps = 54/269 (20%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLE------LLKRY 151
L KIG+G+FG+V +D T + VAIK++ + E EI VL + K Y
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVD--LVREIGRQLLE 208
GS + W I+ E LG S D L P P+D + I R++L+
Sbjct: 92 ---GSYLKDTKLW--------IIMEYLGGGSALDLLE-----PGPLDETQIATILREILK 135
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H + IH D+K N+L +K+ D+ V
Sbjct: 136 GLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVA------------------------ 171
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
G + N V T + APEVI + D+WS+G IEL GE H L
Sbjct: 172 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEP---PHSELH 228
Query: 329 HLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
+ ++ + P + KP ++FV
Sbjct: 229 PMKVLFLIPKNNPPTLEGNYSKPLKEFVE 257
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 131/326 (40%), Gaps = 78/326 (23%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
KIGEG+ G V R +G+ VA+K + K+ R E+ E++ D V++
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR----ELLFNEVVIMRDYQHENVVEM 82
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
N + + + +V E L G +L D + + + + +L+ ++ +H +IH
Sbjct: 83 YNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K ++IL +K+ D+ A+ +V K L
Sbjct: 140 RDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL----------------------- 176
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPI 340
V T ++ APE+I L + D+WS+G ++IE+ GE +
Sbjct: 177 -VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY------------------- 216
Query: 341 PQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDL 400
++P K ++ R + P PRL+NL + L
Sbjct: 217 -------FNEPPLKAMKMIRDNLP---------------PRLKNL-----HKVSPSLKGF 249
Query: 401 LQGLLRYDPSSRLTAHDALKHPFFTR 426
L LL DP+ R TA + LKHPF +
Sbjct: 250 LDRLLVRDPAQRATAAELLKHPFLAK 275
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y KIG+G G V +D TG+ VAI+ + ++ E+ + E+L +
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 77
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V + + + + +V E L G SL D + + + V R+ L+ + F+H
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 134
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
++IH D+K +NIL L ++K+ DFG A
Sbjct: 135 SNQVIHRDIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 167
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
E + + +V T ++ APEV+ + D+WS+G + IE+ GE
Sbjct: 168 TPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 118/260 (45%), Gaps = 44/260 (16%)
Query: 95 SRYKILRKIGEGTFGQVL---DCLDRETGETVAIKVVR-SIKKYREAAMTEI--DVLELL 148
S +++L+ +G+G+FG+V ++G A+KV++ + K R+ T++ D+L
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILA-- 85
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
D + V++ F + ++ + L G L+ L K F + V+ +L
Sbjct: 86 ---DVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAELA 140
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +H L +I+ DLKPENIL L + IK+ D
Sbjct: 141 LGLDHLHSLGIIYRDLKPENIL---------------------------LDEEGHIKLTD 173
Query: 268 FGST--AYEHQEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG + A +H++ Y T Y APEV+ G S+ D WS G ++ E+ +G FQ
Sbjct: 174 FGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGK 233
Query: 325 ENLEHLAMMERVLGPIPQHM 344
+ E + ++ + +PQ +
Sbjct: 234 DRKETMTLILKAKLGMPQFL 253
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 136/316 (43%), Gaps = 54/316 (17%)
Query: 89 LGENLT-SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEID 143
LG +T + ++ L+ +G+GTFG+V+ ++ TG A+K+++ I E A +TE
Sbjct: 1 LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
VL+ + ++ F + +C V E G L+ L + R F D R
Sbjct: 61 VLQ-----NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 113
Query: 203 GRQLLECVAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
G +++ + ++H + +++ DLK EN++ ++KI D+ + D
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----------- 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
G+T T Y APEV+ + D W +G ++ E+ G F
Sbjct: 163 -------GATM------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
Query: 322 --QTHENLEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK 374
Q HE L L +ME R LGP + +L + K K RL G S E K
Sbjct: 210 YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAK 260
Query: 375 AVLKLPRLQNLVMQHV 390
+++ +V QHV
Sbjct: 261 EIMQHRFFAGIVWQHV 276
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 104/241 (43%), Gaps = 49/241 (20%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K ++ K R +EL R
Sbjct: 63 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARRE-------VELHWR----A 111
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 112 SQCPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIG 171
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 172 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 207
Query: 268 FGSTAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCIL-IELCSGEALFQT 323
FG A E HN + + T +Y APEV+ + CD WS+G I I LC +
Sbjct: 208 FG-FAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSN 266
Query: 324 H 324
H
Sbjct: 267 H 267
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 31/220 (14%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
L +IG+G+FG+V +D T + VAIK++ + E + ++ +L + D S
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCD--SSYVT 84
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+ + + + I+ E LG S D LR + F + + +++L+ + ++H +
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLHSEKK 141
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH D+K N+L +K+ D+ V G +
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVA------------------------GQLTDTQIKR 177
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
N V T + APEVI + D+WS+G IEL GE
Sbjct: 178 NTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/316 (25%), Positives = 134/316 (42%), Gaps = 53/316 (16%)
Query: 88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEID 143
A+ + ++ L+ +G+GTFG+V+ ++ TG A+K+++ I E A +TE
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 61
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
VL+ + ++ F + +C V E G L+ L + R F D R
Sbjct: 62 VLQ-----NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFY 114
Query: 203 GRQLLECVAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
G +++ + ++H + +++ DLK EN++ ++KI D+ + D
Sbjct: 115 GAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD----------- 163
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
G+T T Y APEV+ + D W +G ++ E+ G F
Sbjct: 164 -------GATM------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
Query: 322 --QTHENLEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK 374
Q HE L L +ME R LGP + +L + K K RL G S E K
Sbjct: 211 YNQDHEKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAK 261
Query: 375 AVLKLPRLQNLVMQHV 390
+++ +V QHV
Sbjct: 262 EIMQHRFFAGIVWQHV 277
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 125/337 (37%), Gaps = 78/337 (23%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
T Y++ IG G++ C+ + T A+K+ I K + EI E+L RY
Sbjct: 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEI---EILLRY 72
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ + +++ +D ++ +V E+ G L D + + + F + + + V
Sbjct: 73 GQH-PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKTV 129
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H ++H DLKP NIL+V +I++ DFG
Sbjct: 130 EYLHAQGVVHRDLKPSNILYVDES-----------------------GNPESIRICDFGF 166
Query: 271 TAYEHQEHNYIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
E+ + + T ++ APEV+ G+ CD+WS+G +L +G F
Sbjct: 167 AKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFAN---- 222
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVM 387
GP D P E R G + S+ K
Sbjct: 223 ----------GPD--------DTPEEILARIGSGKFSLSGGYWNSVSDTAK--------- 255
Query: 388 QHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
DL+ L DP RLTA L+HP+
Sbjct: 256 -----------DLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 118/276 (42%), Gaps = 50/276 (18%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++++ +G GT+GQV +TG+ AIKV+ E EI+ +LK+Y S
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEIN---MLKKY--SHH 80
Query: 157 RCVQI-------RNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLE 208
R + +N + + +V E G S+ D ++ + + I R++L
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILR 140
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
++ +H ++IH D+K +N+L L +++ +K++DF
Sbjct: 141 GLSHLHQHKVIHRDIKGQNVL---------------------------LTENAEVKLVDF 173
Query: 269 GSTAYEHQ---EHNYIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILIELCSGEAL 320
G +A + N + T ++ APEVI + + D+WS+G IE+ G
Sbjct: 174 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
Query: 321 FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFV 356
+ L ++ R P P+ K+ K + F+
Sbjct: 234 LCDMHPMRALFLIPR--NPAPRLKSKKWSKKFQSFI 267
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRS 154
++ILR +G G+FG+V R G A+KV++ + + ++ T + L L
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML-----SI 62
Query: 155 GSRCVQIRNWFDYRN--HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ IR W +++ I ++ + + G L+ LRK+ P PV + ++ +
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV--AKFYAAEVCLALE 120
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +I+ DLKPENIL L K+ IK+ DFG
Sbjct: 121 YLHSKDIIYRDLKPENIL---------------------------LDKNGHIKITDFGFA 153
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
Y + T Y APEV+ ++ D WS G ++ E+ +G F
Sbjct: 154 KYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 53/309 (17%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKR 150
+ ++ L+ +G+GTFG+V+ ++ TG A+K+++ I E A +TE VL+
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ---- 65
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ ++ F + +C V E G L+ L + R F D R G +++
Sbjct: 66 -NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSA 122
Query: 210 VAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H + +++ DLK EN++ ++KI D+ + D
Sbjct: 123 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------------------ 164
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHEN 326
G+T T Y APEV+ + D W +G ++ E+ G F Q HE
Sbjct: 165 GATM------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 218
Query: 327 LEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
L L +ME R LGP + +L + K K RL G S E K +++
Sbjct: 219 LFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAKEIMQHRF 269
Query: 382 LQNLVMQHV 390
+V QHV
Sbjct: 270 FAGIVWQHV 278
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEID----VLEL 147
++ Y + IG G++G+V + + T ++ R+ KK + + ++D +E+
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEI 76
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+K D +++ F+ I +V E+ G L++ R + R F I + +
Sbjct: 77 MKSLDHPN--IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDV 132
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L VA+ H L + H DLKPEN LF++ PD S +K+I
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLI 168
Query: 267 DFGSTA--YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG A + V T +Y +P+V+ GL + CD WS G ++ L G F
Sbjct: 169 DFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP 227
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
+ E + + P+ V AE +RR
Sbjct: 228 TDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 261
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 117/274 (42%), Gaps = 42/274 (15%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEID----VLEL 147
++ Y + IG G++G+V + + T ++ R+ KK + + ++D +E+
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIEI 59
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+K D +++ F+ I +V E+ G L++ R + R F I + +
Sbjct: 60 MKSLDHPN--IIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAARIMKDV 115
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L VA+ H L + H DLKPEN LF++ PD S +K+I
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDS----PD--------------------SPLKLI 151
Query: 267 DFGSTA--YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
DFG A + V T +Y +P+V+ GL + CD WS G ++ L G F
Sbjct: 152 DFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAP 210
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRR 358
+ E + + P+ V AE +RR
Sbjct: 211 TDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRR 244
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 131/342 (38%), Gaps = 83/342 (24%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELL 148
++T Y++ ++G+G F V C+ TG+ A K++ + K + + E + LL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K V++ + +VF+++ G L++ + Y + +Q+L
Sbjct: 61 KH-----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQIL 113
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E V H ++H DLKPEN+L S K +A+K+ D
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLAD 149
Query: 268 FG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG + Q T Y +PEV+ + P DMW+ G IL L G F
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDE 209
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ QH L + ++ G D+P P
Sbjct: 210 D----------------QHRLYQQ-------IKAGAYDFPS--------------PEWDT 232
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
+ + DL+ +L +P+ R+TA +ALKHP+ +
Sbjct: 233 VTPEAK--------DLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 99/227 (43%), Gaps = 38/227 (16%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+Y KIG+G G V +D TG+ VAI+ + ++ E+ + E+L +
Sbjct: 22 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMN----LQQQPKKELIINEILVMRENKN 77
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V + + + + +V E L G SL D + + + V R+ L+ + F+H
Sbjct: 78 PNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAV---CRECLQALEFLH 134
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY- 273
++IH ++K +NIL L ++K+ DFG A
Sbjct: 135 SNQVIHRNIKSDNIL---------------------------LGMDGSVKLTDFGFCAQI 167
Query: 274 --EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
E + + +V T ++ APEV+ + D+WS+G + IE+ GE
Sbjct: 168 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 53/309 (17%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKR 150
+ ++ L+ +G+GTFG+V+ ++ TG A+K+++ I E A +TE VL+
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ---- 206
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ ++ F + +C V E G L+ L + R F D R G +++
Sbjct: 207 -NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSA 263
Query: 210 VAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H + +++ DLK EN++ ++KI D+ + D
Sbjct: 264 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------------------ 305
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHEN 326
G+T T Y APEV+ + D W +G ++ E+ G F Q HE
Sbjct: 306 GATM------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 359
Query: 327 LEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
L L +ME R LGP + +L + K K RL G S E K +++
Sbjct: 360 LFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAKEIMQHRF 410
Query: 382 LQNLVMQHV 390
+V QHV
Sbjct: 411 FAGIVWQHV 419
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 132/309 (42%), Gaps = 53/309 (17%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAA--MTEIDVLELLKR 150
+ ++ L+ +G+GTFG+V+ ++ TG A+K+++ I E A +TE VL+
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ---- 203
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
+ ++ F + +C V E G L+ L + R F D R G +++
Sbjct: 204 -NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSA 260
Query: 210 VAFMHDLR-LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H + +++ DLK EN++ ++KI D+ + D
Sbjct: 261 LDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD------------------ 302
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHEN 326
G+T T Y APEV+ + D W +G ++ E+ G F Q HE
Sbjct: 303 GATM------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK 356
Query: 327 LEHLAMME-----RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPR 381
L L +ME R LGP + +L + K K RL G S E K +++
Sbjct: 357 LFELILMEEIRFPRTLGPEAKSLLSGLLKKDPK----QRL----GGGS-EDAKEIMQHRF 407
Query: 382 LQNLVMQHV 390
+V QHV
Sbjct: 408 FAGIVWQHV 416
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/342 (22%), Positives = 131/342 (38%), Gaps = 83/342 (24%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELL 148
++T Y++ ++G+G F V C+ TG+ A K++ + K + + E + LL
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K V++ + +VF+++ G L++ + Y + +Q+L
Sbjct: 61 KH-----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHCIQQIL 113
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E V H ++H DLKPEN+L S K +A+K+ D
Sbjct: 114 ESVNHCHLNGIVHRDLKPENLLLASKS------------------------KGAAVKLAD 149
Query: 268 FG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
FG + Q T Y +PEV+ + P DMW+ G IL L G F
Sbjct: 150 FGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDE 209
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ QH L + ++ G D+P + +A
Sbjct: 210 D----------------QHRLYQQ-------IKAGAYDFPSPEWDTVTPEAK-------- 238
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
DL+ +L +P+ R+TA +ALKHP+ +
Sbjct: 239 --------------DLINKMLTINPAKRITASEALKHPWICQ 266
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+++ +R +G G+FG+V+ +ETG A+K+ + K + + +I+ KR ++
Sbjct: 43 QFERIRTLGTGSFGRVMLVKHKETGNHYAMKI---LDKQKVVKLKQIEHTLNEKRIQQAV 99
Query: 156 SRCVQIRNWFDYRNH--ICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
+ ++ F ++++ + +V E G ++ LR+ F R Q++ +
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H L LI+ DLKPEN+L Y+K+ D+ R G T
Sbjct: 158 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK--------------------GRTW 197
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 X-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ IG G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-ML 178
A+K++ K K E + E +L+ + + V++ F +++ +V E M
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+K+
Sbjct: 125 GGDMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
D+ R G T + T Y APE+IL G+
Sbjct: 183 ADFGFAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ IG G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-ML 178
A+K++ K K E + E +L+ + + V++ F +++ +V E M
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYMP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+K+
Sbjct: 125 GGDMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
D+ R G T + T Y APE+IL G+
Sbjct: 183 ADFGFAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
RY R +G+G F + + D +T E A KVV +K +++ M TEI + + L
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
V +F+ + + +V E+ SL + ++ P R RQ ++ V
Sbjct: 100 --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H+ R+IH DLK N+ +KI D+ + +
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 191
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
++ + + T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E
Sbjct: 192 IEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
+++ +P+H ++ A +RR
Sbjct: 252 IRIKKNEYSVPRH----INPVASALIRR 275
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 115/275 (41%), Gaps = 36/275 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIK---VVRSIKKYREAAMTEIDVLELLKRYD 152
+Y L+KIGEG+FG+ + E G IK + R K RE + E+ VL +K +
Sbjct: 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPN 84
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
VQ R F+ + IV + G L+ + F D + + Q+ +
Sbjct: 85 -----IVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALK 139
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+HD +++H D+K +NI +++ D+ + + V +
Sbjct: 140 HVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARAC-------------- 185
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ--THENLEH 329
+ T +Y +PE+ ++ D+W++GC+L ELC+ + F+ + +NL
Sbjct: 186 ----------IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV- 234
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWP 364
L ++ P+ H + + +R D P
Sbjct: 235 LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRP 269
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
RY R +G+G F + + D +T E A KVV +K +++ M TEI + + L
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
V +F+ + + +V E+ SL + ++ P R RQ ++ V
Sbjct: 100 --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H+ R+IH DLK N+ +KI D+ + +
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 191
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
++ + + T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E
Sbjct: 192 IEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
+++ +P+H ++ A +RR
Sbjct: 252 IRIKKNEYSVPRH----INPVASALIRR 275
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
+ L+ +G+GTFG+V+ ++ TG A+K++R I K A +TE VL+ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +++ D+K EN++ ++KI D+ + +D G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 162 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
L +ME + P
Sbjct: 216 LILMEEIRFP 225
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
+ L+ +G+GTFG+V+ ++ TG A+K++R I K A +TE VL+ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +++ D+K EN++ ++KI D+ + +D G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 162 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
L +ME + P
Sbjct: 216 LILMEEIRFP 225
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 37/262 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY----REAAMTEIDVLELLKRYD 152
++ R +G+G FG+V C R TG+ A K + + A+ E +LE
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE------ 239
Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ SR V + ++ ++ +C+V ++ G L + FP ++ +
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
+H R+++ DLKPENIL +++I D + P
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---------------------- 337
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
E Q V T Y APEV+ +++ D W++GC+L E+ +G++ FQ +
Sbjct: 338 ---EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
Query: 331 AMMERVLGPIPQHMLKRVDKPA 352
+ER++ +P+ +R A
Sbjct: 395 EEVERLVKEVPEEYSERFSPQA 416
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
+ L+ +G+GTFG+V+ ++ TG A+K++R I K A +TE VL+ +
Sbjct: 10 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 64
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 122
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +++ D+K EN++ ++KI D+ + +D G+T
Sbjct: 123 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 164
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 165 M------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 218
Query: 330 LAMMERVLGP 339
L +ME + P
Sbjct: 219 LILMEEIRFP 228
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
RY R +G+G F + + D +T E A KVV +K +++ M TEI + + L
Sbjct: 27 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 83
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
V +F+ + + +V E+ SL + ++ P R RQ ++ V
Sbjct: 84 --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 139
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H+ R+IH DLK N+ +KI D+ + +
Sbjct: 140 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 175
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
++ + + T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E
Sbjct: 176 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 235
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
+++ +P+H ++ A +RR
Sbjct: 236 IRIKKNEYSVPRH----INPVASALIRR 259
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ +ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHKETGNHF 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 116/268 (43%), Gaps = 40/268 (14%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAM-TEIDVLELLKRY 151
RY R +G+G F + + D +T E A KVV +K +++ M TEI + + L
Sbjct: 43 RYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
V +F+ + + +V E+ SL + ++ P R RQ ++ V
Sbjct: 100 --DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGV 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H+ R+IH DLK N+ +KI D+ + +
Sbjct: 156 QYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATK------------------------ 191
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
++ + + T +Y APEV+ G S+ D+WS+GCIL L G+ F+T E
Sbjct: 192 IEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETY 251
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRR 358
+++ +P+H ++ A +RR
Sbjct: 252 IRIKKNEYSVPRH----INPVASALIRR 275
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
+ L+ +G+GTFG+V+ ++ TG A+K++R I K A +TE VL+ +
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 66
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 124
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +++ D+K EN++ ++KI D+ + +D G+T
Sbjct: 125 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 167 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 220
Query: 330 LAMMERVLGP 339
L +ME + P
Sbjct: 221 LILMEEIRFP 230
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
+ L+ +G+GTFG+V+ ++ TG A+K++R I K A +TE VL+ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +++ D+K EN++ ++KI D+ + +D G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 162 M------KXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
L +ME + P
Sbjct: 216 LILMEEIRFP 225
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
+ L+ +G+GTFG+V+ ++ TG A+K++R I K A +TE VL+ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +++ D+K EN++ ++KI D+ + +D G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 162 M------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
L +ME + P
Sbjct: 216 LILMEEIRFP 225
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ +ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHKETGNHF 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 116/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ +ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHKETGNHF 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEYSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 112/259 (43%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ IG G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTIGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+K+
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
D+ R G T + T Y APE+IL G+
Sbjct: 183 ADFGFAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 108/250 (43%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREA-AMTEIDVLELLKRYD 152
+ L+ +G+GTFG+V+ ++ TG A+K++R I K A +TE VL+ +
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ-----N 61
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
++ F + +C V E G L+ L + R F + R G +++ +
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALE 119
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H +++ D+K EN++ ++KI D+ + +D G+T
Sbjct: 120 YLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD------------------GAT 161
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENLEH 329
T Y APEV+ + D W +G ++ E+ G F Q HE L
Sbjct: 162 M------KTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFE 215
Query: 330 LAMMERVLGP 339
L +ME + P
Sbjct: 216 LILMEEIRFP 225
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 111/262 (42%), Gaps = 37/262 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY----REAAMTEIDVLELLKRYD 152
++ R +G+G FG+V C R TG+ A K + + A+ E +LE
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILE------ 239
Query: 153 RSGSR-CVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ SR V + ++ ++ +C+V ++ G L + FP ++ +
Sbjct: 240 KVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGL 299
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
+H R+++ DLKPENIL +++I D + P
Sbjct: 300 EDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVP---------------------- 337
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
E Q V T Y APEV+ +++ D W++GC+L E+ +G++ FQ +
Sbjct: 338 ---EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR 394
Query: 331 AMMERVLGPIPQHMLKRVDKPA 352
+ER++ +P+ +R A
Sbjct: 395 EEVERLVKEVPEEYSERFSPQA 416
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVR-SIKKYREAAMTEI--DVLEL 147
S++++L+ +G+G+FG+V + + +G + A+KV++ + K R+ T++ D+L
Sbjct: 24 SQFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-- 80
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+ + V++ F + ++ + L G L+ L K F + V+ +L
Sbjct: 81 ---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAEL 135
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ +H L +I+ DLKPENIL ++K+ D+ ++ S I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------------I 177
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
D AY T Y APEV+ G + D WS G ++ E+ +G FQ +
Sbjct: 178 DHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
Query: 327 LEHLAMMERVLGPIPQHM 344
E + M+ + +PQ +
Sbjct: 232 KETMTMILKAKLGMPQFL 249
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
+++ ++ +G G+FG+V+ +ETG A+K++ K K E + E +L+ +
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 119
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ V++ F +++ +V E + G ++ LR+ F R Q++
Sbjct: 120 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTF 175
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H L LI+ DLKPEN+L Y+++ TD + KR+ G
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 215
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 216 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVR-SIKKYREAAMTEI--DVLEL 147
S++++L+ +G+G+FG+V + + +G + A+KV++ + K R+ T++ D+L
Sbjct: 24 SQFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-- 80
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+ + V++ F + ++ + L G L+ L K F + V+ +L
Sbjct: 81 ---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAEL 135
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ +H L +I+ DLKPENIL ++K+ D+ ++ S I
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------------I 177
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
D AY T Y APEV+ G + D WS G ++ E+ +G FQ +
Sbjct: 178 DHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 231
Query: 327 LEHLAMMERVLGPIPQHM 344
E + M+ + +PQ +
Sbjct: 232 KETMTMILKAKLGMPQFL 249
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 118/258 (45%), Gaps = 40/258 (15%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETG----ETVAIKVVR-SIKKYREAAMTEI--DVLEL 147
S++++L+ +G+G+FG+V + + +G + A+KV++ + K R+ T++ D+L
Sbjct: 25 SQFELLKVLGQGSFGKVF-LVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDIL-- 81
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQL 206
+ + V++ F + ++ + L G L+ L K F + V+ +L
Sbjct: 82 ---VEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM--FTEEDVKFYLAEL 136
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ +H L +I+ DLKPENIL ++K+ D+ ++ S I
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKES------------------I 178
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
D AY T Y APEV+ G + D WS G ++ E+ +G FQ +
Sbjct: 179 DHEKKAYS------FCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR 232
Query: 327 LEHLAMMERVLGPIPQHM 344
E + M+ + +PQ +
Sbjct: 233 KETMTMILKAKLGMPQFL 250
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
+++ ++ +G G+FG+V+ +ETG A+K++ K K E + E +L+ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ V++ F +++ +V E + G ++ LR+ F R Q++
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H L LI+ DLKPEN+L Y+++ TD + KR+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 129/340 (37%), Gaps = 83/340 (24%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLK 149
T Y++ ++G+G F V C+ G+ A ++ + K + + E + LLK
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
V++ + H ++F+++ G L++ + Y + +Q+LE
Sbjct: 69 H-----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHCIQQILE 121
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
V H + ++H +LKPEN+L S K +A+K+ DF
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASK------------------------LKGAAVKLADF 157
Query: 269 G---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
G E Q T Y +PEV+ + P D+W+ G IL L G F +
Sbjct: 158 GLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED 217
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
QH L + ++ G D+P + +A
Sbjct: 218 ----------------QHRLYQQ-------IKAGAYDFPSPEWDTVTPEAK--------- 245
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFT 425
DL+ +L +PS R+TA +ALKHP+ +
Sbjct: 246 -------------DLINKMLTINPSKRITAAEALKHPWIS 272
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
+++ ++ +G G+FG+V+ +ETG A+K++ K K E + E +L+ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ V++ F +++ +V E + G ++ LR+ F R Q++
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H L LI+ DLKPEN+L Y+++ TD + KR+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
+++ ++ +G G+FG+V+ +ETG A+K++ K K E + E +L+ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ V++ F +++ +V E + G ++ LR+ F R Q++
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H L LI+ DLKPEN+L Y+++ TD + KR+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 104/227 (45%), Gaps = 39/227 (17%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
+++ ++ +G G+FG+V+ +ETG A+K++ K K E + E +L+ +
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ V++ F +++ +V E G ++ LR+ F R Q++
Sbjct: 100 --NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 155
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H L LI+ DLKPEN++ Y+K+ TD + KR+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKV----------TDFGFAKRVK----------GR 195
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 196 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 102/242 (42%), Gaps = 40/242 (16%)
Query: 89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSI----KKYREAAMTEIDV 144
+G N + ++I +KIG G F +V G VA+K V+ K R + EID+
Sbjct: 26 MGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDL 85
Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLR-----KNNYRPFPVDLV 199
L+ L ++ F N + IV E+ D R K R P V
Sbjct: 86 LKQLNH-----PNVIKYYASFIEDNELNIVLELADAG--DLSRMIKHFKKQKRLIPERTV 138
Query: 200 REIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
+ QL + MH R++H D+KP N+ + +K+ D +
Sbjct: 139 WKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLG--------------- 183
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
+ +TA + +V T +Y +PE I G+++ D+WS+GC+L E+ + ++
Sbjct: 184 ----RFFSSKTTA-----AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQS 234
Query: 320 LF 321
F
Sbjct: 235 PF 236
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 46/243 (18%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
+ +++++ RKIG G+FG++ + +T E VAIK + ++K + E + +L+
Sbjct: 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYESKIYRILQ--- 60
Query: 153 RSGSRCVQIRNWFDYR-NHICIVFEMLGPSLYDFLRKNNY--RPFPVDLVREIGRQLLEC 209
G+ +R WF ++ +V ++LGPSL D N+ R + V + Q++
Sbjct: 61 -GGTGIPNVR-WFGVEGDYNVLVMDLLGPSLEDLF---NFCSRKLSLKTVLMLADQMINR 115
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
V F+H +H D+KP+N L +++ + +IDFG
Sbjct: 116 VEFVHSKSFLHRDIKPDNFLMGLGR------------------------RANQVYIIDFG 151
Query: 270 -------STAYEH---QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
++ ++H +E+ + T Y + LG+ S D+ S+G +L+ G
Sbjct: 152 LAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSL 211
Query: 320 LFQ 322
+Q
Sbjct: 212 PWQ 214
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 133/329 (40%), Gaps = 88/329 (26%)
Query: 102 KIGEGTFGQVLDCLDRE--TGETVAIKVVRSIKKYR-EAAMTEIDVLELLKRYDRSGSRC 158
KIGEG+ G V CL RE +G VA+K++ K+ R E E+ ++ + ++
Sbjct: 52 KIGEGSTGIV--CLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN-----V 104
Query: 159 VQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
V++ + + ++ E L G +L D + + + V E +L+ +A++H
Sbjct: 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHAQG 161
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH D+K ++IL +K+ D+ A+ DV K L
Sbjct: 162 VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL-------------------- 201
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVL 337
V T ++ APEVI ++ D+WS+G ++IE+ GE + +
Sbjct: 202 ----VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDS------------ 245
Query: 338 GPIPQHMLKRV-DKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAG- 395
P +KR+ D P P+L+N H
Sbjct: 246 ---PVQAMKRLRDSPP---------------------------PKLKN------SHKVSP 269
Query: 396 YLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
L D L+ +L DP R TA + L HPF
Sbjct: 270 VLRDFLERMLVRDPQERATAQELLDHPFL 298
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
+++ ++ +G G+FG+V+ +ETG A+K++ K K E + E +L+ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ V++ F +++ +V E + G ++ LR+ F R Q++
Sbjct: 92 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFSEPHARFYAAQIVLTF 147
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H L LI+ DLKPEN+L Y+++ TD + KR+ G
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 187
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 188 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 133/345 (38%), Gaps = 83/345 (24%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
+ L +Y I +G G FG V C++ + +T K V+ + EI +L + +
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARH 60
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---QLL 207
+ + + F+ + ++FE + S D + N F ++ REI Q+
Sbjct: 61 RN-----ILHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELN-EREIVSYVHQVC 112
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + F+H + H D++PENI++ + +SS IK+I+
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIY-------------------------QTRRSSTIKIIE 147
Query: 268 FGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHE 325
FG N+ + + Y APEV S DMWS+G ++ L SG F
Sbjct: 148 FGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207
Query: 326 NLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNL 385
N + ++E ++ + E A SI+A
Sbjct: 208 NQQ---IIENIMN--------------------AEYTFDEEAFKEISIEA---------- 234
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYR 430
+D + LL + SR+TA +AL+HP+ + R
Sbjct: 235 ------------MDFVDRLLVKERKSRMTASEALQHPWLKQKIER 267
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 121
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLH 179
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ ++
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVKGATWT----------- 218
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 219 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 39/227 (17%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRY 151
+++ ++ +G G+FG+V+ +ETG A+K++ K K E + E +L+ +
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 152 DRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ V++ F +++ +V E + G ++ LR+ F R Q++
Sbjct: 92 --NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIG--RFXEPHARFYAAQIVLTF 147
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H L LI+ DLKPEN+L Y+++ TD + KR+ G
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GR 187
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 188 TWX-------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ + + T Y APE+IL G+
Sbjct: 184 ----------TDFGFAKRVKGRTWT-----------------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 114/271 (42%), Gaps = 51/271 (18%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV------LEL 147
+ +Y + +G G FG V +D+E + V +K ++ K + + + + + +
Sbjct: 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAI 82
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
L R + + +++ + F+ + +V E G L F + + L I RQL+
Sbjct: 83 LSRVEHA--NIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
V ++ +IH D+K ENI+ + + IK+ID
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIV---------------------------IAEDFTIKLID 173
Query: 268 FGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALF-QT 323
FGS AY + + T Y APEV++G + P +MWS+G L L E F +
Sbjct: 174 FGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCEL 233
Query: 324 HENLEH------------LAMMERVLGPIPQ 342
E +E ++++ +L P+P+
Sbjct: 234 EETVEAAIHPPYLVSKELMSLVSGLLQPVPE 264
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 51/285 (17%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR 162
+G G FG V C + + VAIK + S + R+A + E L L R + ++
Sbjct: 16 VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVE---LRQLSRVNHPNI----VK 65
Query: 163 NWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC---VAFMHDLR- 217
+ N +C+V E G SLY+ L + P P L+C VA++H ++
Sbjct: 66 LYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 123
Query: 218 --LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
LIH DLKP N+L V+ + +K+ DFG TA +
Sbjct: 124 KALIHRDLKPPNLLLVA--------------------------GGTVLKICDFG-TACDI 156
Query: 276 QEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
Q H + + APEV G +S CD++S G IL E+ + F M
Sbjct: 157 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA 216
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
G P ++K + KP E + R W + + R S++ ++K+
Sbjct: 217 VHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 257
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVA 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 121/285 (42%), Gaps = 51/285 (17%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIR 162
+G G FG V C + + VAIK + S + R+A + E L L R + ++
Sbjct: 17 VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVE---LRQLSRVNHPNI----VK 66
Query: 163 NWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC---VAFMHDLR- 217
+ N +C+V E G SLY+ L + P P L+C VA++H ++
Sbjct: 67 LYGACLNPVCLVMEYAEGGSLYNVL--HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQP 124
Query: 218 --LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
LIH DLKP N+L V+ + +K+ DFG TA +
Sbjct: 125 KALIHRDLKPPNLLLVA--------------------------GGTVLKICDFG-TACDI 157
Query: 276 QEH-NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
Q H + + APEV G +S CD++S G IL E+ + F M
Sbjct: 158 QTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA 217
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
G P ++K + KP E + R W + + R S++ ++K+
Sbjct: 218 VHNGTRPP-LIKNLPKPIESLMTRC---WSKDPSQRPSMEEIVKI 258
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 114/257 (44%), Gaps = 43/257 (16%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH--ICIVFEML-GP 180
A+K+ + K + + EI+ KR ++ + ++ F ++++ + +V E G
Sbjct: 70 AMKI---LDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+K+ D
Sbjct: 127 EMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTD 184
Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
+ + R G T + T Y APE+IL G++
Sbjct: 185 FGLAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGYNK 217
Query: 301 PCDMWSVGCILIELCSG 317
D W++G ++ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+K+
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 4 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 55
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 56 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 110
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 111 GGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 168
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ + + T Y APE+IL G+
Sbjct: 169 ----------TDFGFAKRVKGRTWT-----------------LCGTPEYLAPEIILSKGY 201
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 202 NKAVDWWALGVLIYEMAAG 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 126 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E +
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYVP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN+L Y+++
Sbjct: 125 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+K+
Sbjct: 125 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 106/234 (45%), Gaps = 39/234 (16%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
+ T Y APE+IL G++ D W++G ++ E+ +G F E ++
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQ 245
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFAEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 47 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 101
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 102 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 159
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 160 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 198
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 199 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 67 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 121
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 122 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLH 179
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 180 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 218
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 219 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSG 155
++ILR IG+G+FG+V +T + A+K + K R L++++ +
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHP- 75
Query: 156 SRCVQIRNWFDYRNH---ICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
+ W+ +++ +V +LG L L++N + F + V+ +L+ + +
Sbjct: 76 ---FLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKEETVKLFICELVMALDY 130
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ + R+IH D+KP+NIL ++ I D+ + A LP+ + I
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA----------MLPRETQITT------- 173
Query: 273 YEHQEHNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSG 317
+ T+ Y APE+ G G+S+ D WS+G EL G
Sbjct: 174 --------MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRG 213
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 33 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 87
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 88 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 145
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 146 SLDLIYRDLKPENLLIDEQGYIQV----------TDFGFAKRVK----------GRTWX- 184
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 185 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 41 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 95
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 96 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 153
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 154 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 192
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 193 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFXEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 114/259 (44%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + V++ F +++ +V E
Sbjct: 70 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLVKLEFSFKDNSNLYMVMEYAP 124
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+++
Sbjct: 125 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQV 182
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 183 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 215
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 216 NKAVDWWALGVLIYEMAAG 234
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + ++ F +++ +V E
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+K+
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 14 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 74 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 129
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH +L NIL + +KI D+ +T P D YYK + P S I
Sbjct: 130 YLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPI------- 182
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 183 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 211
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 43/257 (16%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 18 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 69
Query: 124 AIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNH--ICIVFEML-GP 180
A+K+ + K + + EI+ KR ++ + ++ F ++++ + +V E G
Sbjct: 70 AMKI---LDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGG 126
Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPD 240
++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+++ D
Sbjct: 127 EMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTD 184
Query: 241 YKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSY 300
+ + R G T + T Y APE+IL G++
Sbjct: 185 FGLAKRVK--------------------GRTWX-------LCGTPEYLAPEIILSKGYNK 217
Query: 301 PCDMWSVGCILIELCSG 317
D W++G ++ E+ +G
Sbjct: 218 AVDWWALGVLIYEMAAG 234
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 129/347 (37%), Gaps = 83/347 (23%)
Query: 87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEID 143
A T Y++ ++G+G F V C+ + + A K++ + K + + E
Sbjct: 23 MATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREAR 82
Query: 144 VLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI 202
+ LLK V++ + +VF+++ G L++ + Y +
Sbjct: 83 ICRLLKH-----PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREY--YSEADASHC 135
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
Q+LE V +H ++H DLKPEN+L S K +A
Sbjct: 136 IHQILESVNHIHQHDIVHRDLKPENLLLASK------------------------CKGAA 171
Query: 263 IKVIDFG---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEA 319
+K+ DFG E Q T Y +PEV+ + P D+W+ G IL L G
Sbjct: 172 VKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYP 231
Query: 320 LFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKL 379
F + QH L + ++ G D+P +
Sbjct: 232 PFWDED----------------QHKLYQQ-------IKAGAYDFPSPEWDTVT------- 261
Query: 380 PRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
P +NL+ Q +L +P+ R+TA ALKHP+ +
Sbjct: 262 PEAKNLINQ---------------MLTINPAKRITADQALKHPWVCQ 293
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + ++ F +++ +V E
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+K+
Sbjct: 126 GGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 100/238 (42%), Gaps = 40/238 (16%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+RY++ RKIG G+FG + D GE VAIK + +K E + ++++
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHPQLHIESKIYKMMQ----G 61
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
G IR ++ +V E+LGPSL D + R F + V + Q++ + ++H
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 120
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST--- 271
IH D+KP+N L + K + + +IDFG
Sbjct: 121 SKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKY 156
Query: 272 --AYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
A HQ E+ + T Y + LG+ S D+ S+G +L+ G +Q
Sbjct: 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 53/328 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMT---EIDVLELLKRYD 152
Y I +GEG+FG+V +T + VA+K + R + K + M EI L+LL+
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH-- 68
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
+++ + I +V E G L+D++ + + D R +Q++ + +
Sbjct: 69 ---PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAIEY 123
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H +++H DLKPEN+L +KI D+ ++ TD N+ K S
Sbjct: 124 CHRHKIVHRDLKPENLLLDDNLNVKIADFGLS-NIMTDGNFLKTSCGSP----------- 171
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTH--ENL-- 327
+Y APEVI G ++ P D+WS G +L + G F NL
Sbjct: 172 -------------NYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218
Query: 328 ---EHLAMMERVLGPIPQHMLKR--VDKPAEKF----VRRG---RLDWPEGATSRESIKA 375
+ +M L P Q +++R V P ++ +RR ++ P+ E ++
Sbjct: 219 KVNSCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVNLPDYLRPMEEVQG 278
Query: 376 VLKLPRLQNLVMQHVDHSAGYLIDLLQG 403
R+ + + + + S Y+++ L+
Sbjct: 279 SYADSRIVSKLGEAMGFSEDYIVEALRS 306
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+IL G++ D W++G ++ ++ +G
Sbjct: 198 ------LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 104/252 (41%), Gaps = 40/252 (15%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+RY++ RKIG G+FG + D GE VAIK + +K E + ++++
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHPQLHIESKIYKMMQ----G 63
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
G IR ++ +V E+LGPSL D + R F + V + Q++ + ++H
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 122
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST--- 271
IH D+KP+N L + K + + +IDFG
Sbjct: 123 SKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAKKY 158
Query: 272 --AYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
A HQ E+ + T Y + LG+ S D+ S+G +L+ G +Q
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218
Query: 325 ENLEHLAMMERV 336
+ ER+
Sbjct: 219 KAATKRQKYERI 230
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 113/259 (43%), Gaps = 47/259 (18%)
Query: 64 FVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETV 123
F+ ++ +W N ++ +L +++ ++ +G G+FG+V+ ETG
Sbjct: 19 FLAKAKEDFLKKWENPAQNTAHL--------DQFERIKTLGTGSFGRVMLVKHMETGNHY 70
Query: 124 AIKVVRSIK----KYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML- 178
A+K++ K K E + E +L+ + + ++ F +++ +V E
Sbjct: 71 AMKILDKQKVVKLKQIEHTLNEKRILQAV-----NFPFLTKLEFSFKDNSNLYMVMEYAP 125
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKI 238
G ++ LR+ F R Q++ ++H L LI+ DLKPEN++ Y+K+
Sbjct: 126 GGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKV 183
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGW 298
TD + KR+ G T + T Y APE+IL G+
Sbjct: 184 ----------TDFGFAKRVK----------GRTWX-------LCGTPEYLAPEIILSKGY 216
Query: 299 SYPCDMWSVGCILIELCSG 317
+ D W++G ++ E+ +G
Sbjct: 217 NKAVDWWALGVLIYEMAAG 235
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 45/244 (18%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
+G+GT+G V D +AIK + +Y + EI + + LK VQ
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH-----KNIVQY 84
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIG---RQLLECVAFMHDLR 217
F I I E + G SL LR + + P D + IG +Q+LE + ++HD +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQ 142
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST---AYE 274
++H D+K +N+L +N Y S +K+ DFG++ A
Sbjct: 143 IVHRDIKGDNVL---------------------INTY-----SGVLKISDFGTSKRLAGI 176
Query: 275 HQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
+ T Y APE+I G+ D+WS+GC +IE+ +G+ F +E E A
Sbjct: 177 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAA 234
Query: 333 MERV 336
M +V
Sbjct: 235 MFKV 238
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 103/250 (41%), Gaps = 37/250 (14%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
+ RY ++ IG G FG D+ T E VA+K + R AA+ E E++
Sbjct: 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIE-----RGAAIDENVQREIINHRSL 73
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V+ + H+ I+ E G LY+ R N F D R +QLL V++
Sbjct: 74 RHPNIVRFKEVILTPTHLAIIMEYASGGELYE--RICNAGRFSEDEARFFFQQLLSGVSY 131
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
H +++ H DLK EN L D + RL K+ DFG
Sbjct: 132 CHSMQICHRDLKLENTLL-------------------DGSPAPRL------KICDFGYSK 166
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQT-HENLE 328
++ H + V T Y APEV+L + D+WS G L + G F+ E +
Sbjct: 167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRD 226
Query: 329 HLAMMERVLG 338
+ ++R+L
Sbjct: 227 YRKTIQRILS 236
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 108/244 (44%), Gaps = 45/244 (18%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
+G+GT+G V D +AIK + +Y + EI + + LK VQ
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH-----KNIVQY 70
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIG---RQLLECVAFMHDLR 217
F I I E + G SL LR + + P D + IG +Q+LE + ++HD +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLK-DNEQTIGFYTKQILEGLKYLHDNQ 128
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST---AYE 274
++H D+K +N+L +N Y S +K+ DFG++ A
Sbjct: 129 IVHRDIKGDNVL---------------------INTY-----SGVLKISDFGTSKRLAGI 162
Query: 275 HQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAM 332
+ T Y APE+I G+ D+WS+GC +IE+ +G+ F +E E A
Sbjct: 163 NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF--YELGEPQAA 220
Query: 333 MERV 336
M +V
Sbjct: 221 MFKV 224
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN++ Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLIIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y APE+I+ G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 73 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D ++K + P S I
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPI------- 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T Y AP +IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E + P L+DF+ + +L R
Sbjct: 64 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSFF 120
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 154
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 155 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Query: 322 QTHENL 327
+ E +
Sbjct: 215 EHDEEI 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 98 KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K+ +K+G G FG+V + ++ T VA+K ++ EA + E +V++ L+
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----D 243
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ V++ + I I+ E + SL DFL+ + P+ + + Q+ E +AF+
Sbjct: 244 KLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
IH DL+ NIL + KI D+ + AR D Y R IK
Sbjct: 303 RNYIHRDLRAANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 350
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
+ APE I ++ D+WS G +L+E+ + G + N E + +E
Sbjct: 351 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 399
Query: 335 R 335
R
Sbjct: 400 R 400
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 97/236 (41%), Gaps = 36/236 (15%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
+ RY++++ IG G FG D+++ E VA+K + +K E EI +
Sbjct: 17 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSL 71
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V+ + H+ IV E G L++ R N F D R +QL+ V++
Sbjct: 72 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 129
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
H +++ H DLK EN L SP + +K+ DFG
Sbjct: 130 CHAMQVCHRDLKLENTLLDG--------------SP-----------APRLKICDFGYSK 164
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
++ H + V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 165 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
LR+IG G+FG V D E VAIK + S K+ E I + L++ +
Sbjct: 59 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-- 116
Query: 159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+Q R + + +V E S D L + +P + + L+ +A++H +
Sbjct: 117 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH D+K NIL P +K+ DFGS +
Sbjct: 176 IHRDVKAGNILLSEP---------------------------GLVKLGDFGSASI-MAPA 207
Query: 279 NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELC 315
N V T ++ APEVIL + + D+WS+G IEL
Sbjct: 208 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 113/253 (44%), Gaps = 41/253 (16%)
Query: 88 ALGENLTSR-----YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAA 138
+G N ++R ++ +R +G+G+FG+V+ +ETG+ A+KV++ + E
Sbjct: 11 GIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECT 70
Query: 139 MTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVD 197
MTE +L L R+ Q+ F + + V E + G L ++K+ R F
Sbjct: 71 MTEKRILSLA----RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEA 124
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRL 257
R +++ + F+HD +I+ DLK +N+L + K+ D+ +
Sbjct: 125 RARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG---------- 174
Query: 258 PKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ + +TA T Y APE++ + + D W++G +L E+ G
Sbjct: 175 -------ICNGVTTA-------TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 318 EALFQTHENLEHL 330
A F+ EN + L
Sbjct: 221 HAPFEA-ENEDDL 232
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 95/236 (40%), Gaps = 36/236 (15%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
+ RY++++ IG G FG D++ E VA+K + +K E EI +
Sbjct: 18 SDRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V+ + H+ IV E G L++ R N F D R +QL+ V++
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
H +++ H DLK EN L SP + +K+ DFG
Sbjct: 131 AHAMQVAHRDLKLENTLLDG--------------SP-----------APRLKIADFGYSK 165
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
+ H + V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 166 ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 101/223 (45%), Gaps = 39/223 (17%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK----KYREAAMTEIDVLELLKRYDRSG 155
++ +G G+FG+V+ +E+G A+K++ K K E + E +L+ + +
Sbjct: 46 IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-----NF 100
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ F +++ +V E + G ++ LR+ F R Q++ ++H
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLH 158
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
L LI+ DLKPEN+L Y+++ TD + KR+ G T
Sbjct: 159 SLDLIYRDLKPENLLIDQQGYIQV----------TDFGFAKRVK----------GRTWX- 197
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ T APE+IL G++ D W++G ++ E+ +G
Sbjct: 198 ------LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75 QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
QW+N + + H + + + R IG G FG+V C +TG+ A+K +
Sbjct: 176 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 228
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
+K+ A+ E +L L+ D C+ F + + + +++ G L+ L ++
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 286
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
F +R +++ + MH+ +++ DLKP NIL +++I D +
Sbjct: 287 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 340
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
++ K+ P +S V T Y APEV+ G+ + D +S+G
Sbjct: 341 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 309 CILIELCSGEALFQTHEN 326
C+L +L G + F+ H+
Sbjct: 379 CMLFKLLRGHSPFRQHKT 396
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75 QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
QW+N + + H + + + R IG G FG+V C +TG+ A+K +
Sbjct: 175 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 227
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
+K+ A+ E +L L+ D C+ F + + + +++ G L+ L ++
Sbjct: 228 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 285
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
F +R +++ + MH+ +++ DLKP NIL +++I D +
Sbjct: 286 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 339
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
++ K+ P +S V T Y APEV+ G+ + D +S+G
Sbjct: 340 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 377
Query: 309 CILIELCSGEALFQTHEN 326
C+L +L G + F+ H+
Sbjct: 378 CMLFKLLRGHSPFRQHKT 395
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 90/220 (40%), Gaps = 35/220 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYDRSGSRC 158
LR+IG G+FG V D E VAIK + S K+ E I + L++ +
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNT-- 77
Query: 159 VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+Q R + + +V E S D L + +P + + L+ +A++H +
Sbjct: 78 IQYRGCYLREHTAWLVMEYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH D+K NIL P +K+ DFGS +
Sbjct: 137 IHRDVKAGNILLSEP---------------------------GLVKLGDFGSASI-MAPA 168
Query: 279 NYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELC 315
N V T ++ APEVIL + + D+WS+G IEL
Sbjct: 169 NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 99 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 155
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 189
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 190 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
Query: 322 QTHENL 327
+ E +
Sbjct: 250 EHDEEI 255
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 65 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 155
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 156 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 322 QTHENL 327
+ E +
Sbjct: 216 EHDEEI 221
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75 QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
QW+N + + H + + + R IG G FG+V C +TG+ A+K +
Sbjct: 176 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 228
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
+K+ A+ E +L L+ D C+ F + + + +++ G L+ L ++
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 286
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
F +R +++ + MH+ +++ DLKP NIL +++I D +
Sbjct: 287 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 340
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
++ K+ P +S V T Y APEV+ G+ + D +S+G
Sbjct: 341 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 309 CILIELCSGEALFQTHEN 326
C+L +L G + F+ H+
Sbjct: 379 CMLFKLLRGHSPFRQHKT 396
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 75 QWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR----S 130
QW+N + + H + + + R IG G FG+V C +TG+ A+K +
Sbjct: 176 QWKNVELNIHLTM-------NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIK 228
Query: 131 IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKN 189
+K+ A+ E +L L+ D C+ F + + + +++ G L+ L ++
Sbjct: 229 MKQGETLALNERIMLSLVSTGDCPFIVCMSYA--FHTPDKLSFILDLMNGGDLHYHLSQH 286
Query: 190 NYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
F +R +++ + MH+ +++ DLKP NIL +++I D +
Sbjct: 287 GV--FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLAC---- 340
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL-GLGWSYPCDMWSVG 308
++ K+ P +S V T Y APEV+ G+ + D +S+G
Sbjct: 341 --DFSKKKPHAS--------------------VGTHGYMAPEVLQKGVAYDSSADWFSLG 378
Query: 309 CILIELCSGEALFQTHEN 326
C+L +L G + F+ H+
Sbjct: 379 CMLFKLLRGHSPFRQHKT 396
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 52 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 112 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 168
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 202
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 203 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
Query: 322 QTHENL 327
+ E +
Sbjct: 263 EHDEEI 268
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 80 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 170
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 171 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 322 QTHENL 327
+ E +
Sbjct: 231 EHDEEI 236
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+G+G F + + D +T E A K+V +K ++ M+ +E+ + V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 104
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+F+ + + +V E+ SL + ++ P R RQ++ ++H R+
Sbjct: 105 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 162
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH DLK N+ +KI D+ + + Y+ +
Sbjct: 163 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 198
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 199 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 258
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
IP+H+ P A+
Sbjct: 259 SIPKHI------------------NPVAAS------------------------------ 270
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
L+Q +L+ DP++R T ++ L FFT Y
Sbjct: 271 -LIQKMLQTDPTARPTINELLNDEFFTSGY 299
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 102/249 (40%), Gaps = 49/249 (19%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
+ ++ + Y + ++G+G F V C+ + TG A K++ + K ++
Sbjct: 15 RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LS 68
Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICI--------VFEML--GPSLYDFLRKNN 190
D ++ +R C ++++ R H I VF+++ G D + +
Sbjct: 69 ARD----FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF 124
Query: 191 YRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Y D I +Q+LE +A+ H ++H +LKPEN+L S
Sbjct: 125 YSE--ADASHCI-QQILESIAYCHSNGIVHRNLKPENLLLASK----------------- 164
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVG 308
K +A+K+ DFG + + T Y +PEV+ +S P D+W+ G
Sbjct: 165 -------AKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACG 217
Query: 309 CILIELCSG 317
IL L G
Sbjct: 218 VILYILLVG 226
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 80 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 170
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 171 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 322 QTHENL 327
+ E +
Sbjct: 231 EHDEEI 236
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 79 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 135
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 169
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 170 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 322 QTHENL 327
+ E +
Sbjct: 230 EHDEEI 235
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 92 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
+ E +
Sbjct: 243 EHDEEI 248
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 27 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 87 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 143
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 177
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 178 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
Query: 322 QTHENL 327
+ E +
Sbjct: 238 EHDEEI 243
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 19 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 79 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 135
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 169
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 170 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 322 QTHENL 327
+ E +
Sbjct: 230 EHDEEI 235
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+G+G F + + D +T E A K+V +K ++ M+ +E+ + V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 102
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+F+ + + +V E+ SL + ++ P R RQ++ ++H R+
Sbjct: 103 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 160
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH DLK N+ +KI D+ + + Y+ +
Sbjct: 161 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 196
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 197 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 256
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
IP+H+ P A+
Sbjct: 257 SIPKHI------------------NPVAAS------------------------------ 268
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
L+Q +L+ DP++R T ++ L FFT Y
Sbjct: 269 -LIQKMLQTDPTARPTINELLNDEFFTSGY 297
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 107 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 163
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 197
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 198 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 322 QTHENL 327
+ E +
Sbjct: 258 EHDEEI 263
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 20 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 80 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 136
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 170
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 171 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 322 QTHENL 327
+ E +
Sbjct: 231 EHDEEI 236
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 92 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
+ E +
Sbjct: 243 EHDEEI 248
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 65 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 155
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 156 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 322 QTHENL 327
+ E +
Sbjct: 216 EHDEEI 221
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 92 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
+ E +
Sbjct: 243 EHDEEI 248
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 93 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
+ E +
Sbjct: 244 EHDEEI 249
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 47 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 107 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 163
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 197
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 198 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 322 QTHENL 327
+ E +
Sbjct: 258 EHDEEI 263
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 93 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
+ E +
Sbjct: 244 EHDEEI 249
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 93 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
+ E +
Sbjct: 244 EHDEEI 249
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 32 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 92 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 148
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 182
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 183 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 322 QTHENL 327
+ E +
Sbjct: 243 EHDEEI 248
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 133/339 (39%), Gaps = 66/339 (19%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVV-RSIKKYREAAMTEIDVLELLKRYDRS 154
YK+ ++ GEG + +V + + G+ A+K++ + R E++ L Y
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL-----YQCQ 68
Query: 155 GSRCV-QIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
G++ + ++ +F+ +VFE L G S+ ++K + F + R + + F
Sbjct: 69 GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDF 126
Query: 213 MHDLRLIHTDLKPENILFVSPEY---LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+H + H DLKPENIL SPE +KI D+ + S +K ++
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDL----------------GSGMK-LNNS 169
Query: 270 STAYEHQEHNYIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILIELCSGEALFQTH 324
T E + Y APEV+ + CD+WS+G +L + SG F H
Sbjct: 170 CTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH 229
Query: 325 ENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQN 384
+ V + + + + +F + DW
Sbjct: 230 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDK---DWA-------------------- 266
Query: 385 LVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
H+ A DL+ LL D RL+A L+HP+
Sbjct: 267 ----HISSEAK---DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+G+G F + + D +T E A K+V +K ++ M+ +E+ + V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 80
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+F+ + + +V E+ SL + ++ P R RQ++ ++H R+
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 138
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH DLK N+ +KI D+ + + Y+ +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 174
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
IP+H+ P A+
Sbjct: 235 SIPKHI------------------NPVAAS------------------------------ 246
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
L+Q +L+ DP++R T ++ L FFT Y
Sbjct: 247 -LIQKMLQTDPTARPTINELLNDEFFTSGY 275
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+G+G F + + D +T E A K+V +K ++ M+ +E+ + V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 80
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+F+ + + +V E+ SL + ++ P R RQ++ ++H R+
Sbjct: 81 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 138
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH DLK N+ +KI D+ + + Y+ +
Sbjct: 139 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 174
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 175 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 234
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
IP+H+ P A+
Sbjct: 235 SIPKHI------------------NPVAAS------------------------------ 246
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
L+Q +L+ DP++R T ++ L FFT Y
Sbjct: 247 -LIQKMLQTDPTARPTINELLNDEFFTSGY 275
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 33 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 93 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 149
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 183
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 184 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 322 QTHENL 327
+ E +
Sbjct: 244 EHDEEI 249
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+G+G F + + D +T E A K+V +K ++ M+ +E+ + V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 84
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+F+ + + +V E+ SL + ++ P R RQ++ ++H R+
Sbjct: 85 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 142
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH DLK N+ +KI D+ + + Y+ +
Sbjct: 143 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 178
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 179 KTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 238
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
IP+H+ P A+
Sbjct: 239 SIPKHI------------------NPVAAS------------------------------ 250
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
L+Q +L+ DP++R T ++ L FFT Y
Sbjct: 251 -LIQKMLQTDPTARPTINELLNDEFFTSGY 279
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 126/330 (38%), Gaps = 83/330 (25%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+G+G F + + D +T E A K+V +K ++ M+ +E+ + V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMS----MEISIHRSLAHQHVV 78
Query: 160 QIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+F+ + + +V E+ SL + ++ P R RQ++ ++H R+
Sbjct: 79 GFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRNRV 136
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH DLK N+ +KI D+ + + Y+ +
Sbjct: 137 IHRDLKLGNLFLNEDLEVKIGDFGLATK------------------------VEYDGERK 172
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ T +Y APEV+ G S+ D+WS+GCI+ L G+ F+T E +++
Sbjct: 173 KVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEY 232
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
IP+H+ P A+
Sbjct: 233 SIPKHI------------------NPVAAS------------------------------ 244
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
L+Q +L+ DP++R T ++ L FFT Y
Sbjct: 245 -LIQKMLQTDPTARPTINELLNDEFFTSGY 273
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 5 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 65 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 155
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 156 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 322 QTHENL 327
+ E +
Sbjct: 216 EHDEEI 221
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 4 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 64 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 120
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 154
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 155 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Query: 322 QTHENL 327
+ E +
Sbjct: 215 EHDEEI 220
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 106/241 (43%), Gaps = 34/241 (14%)
Query: 98 KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K+ +K+G G FG+V + ++ T VA+K ++ EA + E +V++ L+
Sbjct: 18 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----D 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ V++ + I I+ E + SL DFL+ + P+ + + Q+ E +AF+
Sbjct: 71 KLVKLHA-VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 129
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
IH DL+ NIL + KI D+ + AR D Y R IK
Sbjct: 130 RNYIHRDLRAANILVSASLVCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 177
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
+ APE I ++ D+WS G +L+E+ + G + N E + +E
Sbjct: 178 -----------WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE 226
Query: 335 R 335
R
Sbjct: 227 R 227
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVL 145
E L S+Y++ +G G FG V + VAIK V I + E ++V+
Sbjct: 3 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 146 ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIG 203
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 63 -LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFF 119
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
Q+LE V H+ ++H D+K ENIL D+N +
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGEL 153
Query: 264 KVIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALF 321
K+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F
Sbjct: 154 KLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
Query: 322 QTHENL 327
+ E +
Sbjct: 214 EHDEEI 219
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 96/236 (40%), Gaps = 36/236 (15%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
+ RY++++ IG G FG D+++ E VA+K + +K EI +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V+ + H+ IV E G L++ R N F D R +QL+ V++
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--S 270
H +++ H DLK EN L SP + +K+ DFG
Sbjct: 131 CHAMQVCHRDLKLENTLLDG--------------SP-----------APRLKICDFGYSK 165
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
++ H + V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 166 SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K LR++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL ++L+K+ R + L+ + Q+ + +
Sbjct: 76 IVKYKGV---CYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 44/253 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
YK+ R+IGEG+FG + + + + VAIK E ++ L R + +
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLA 62
Query: 157 RCVQIRNWFDYRN---HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
C I N + + H +V ++LGPSL D L R F V V +Q+L V +
Sbjct: 63 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 121
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H+ L++ D+KP+N L P ++ I V+DFG +
Sbjct: 122 HEKSLVYRDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKF 159
Query: 274 ----------EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
++E + T Y + LG S D+ ++G + + G +Q
Sbjct: 160 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 219
Query: 324 HENLEHLAMMERV 336
+ + ER+
Sbjct: 220 LKAATNKQKYERI 232
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 91 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 80 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 135
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 136 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 188
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 189 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 217
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 104 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 159
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 212
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 213 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 241
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 119/279 (42%), Gaps = 48/279 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG+ VA+K++ + + E+ ++++L
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 65
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +V E G ++D+L + + R RQ++ V +
Sbjct: 66 --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQIVSAVQY 121
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLK EN+L + +KI D+ + FG+
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 162
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 163 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 215
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
ERVL IP +M + +KF+ +RG L+
Sbjct: 216 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 252
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 101/253 (39%), Gaps = 44/253 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
YK+ R+IGEG+FG + + + + VAIK E ++ L R + +
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF--------EPRRSDAPQLRDEYRTYKLLA 63
Query: 157 RCVQIRNWFDYRN---HICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
C I N + + H +V ++LGPSL D L R F V V +Q+L V +
Sbjct: 64 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSI 122
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H+ L++ D+KP+N L P ++ I V+DFG +
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNS----------------------KNANMIYVVDFGMVKF 160
Query: 274 ----------EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
++E + T Y + LG S D+ ++G + + G +Q
Sbjct: 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG 220
Query: 324 HENLEHLAMMERV 336
+ + ER+
Sbjct: 221 LKAATNKQKYERI 233
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 79 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 134
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 135 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 187
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 188 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 216
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 31 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 91 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 146
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 147 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 199
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 200 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 228
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 76 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 131
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 153/372 (41%), Gaps = 50/372 (13%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQV-LDCLDRETG--ETVAIK-VVRSIKKYRE 136
KD L+ L++ +KI KIGEGTF V L + G E +A+K ++ + R
Sbjct: 7 KDIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRI 66
Query: 137 AAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFP 195
AA E+ L + D + ++ F +H+ I L S D L +++
Sbjct: 67 AA--ELQCLTVAGGQDN----VMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE-- 118
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS--PEYLKIPDYKVTARSPTDVNY 253
VRE L + + +H ++H D+KP N L+ +Y + T +
Sbjct: 119 ---VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175
Query: 254 YKRLPKSSAIKVIDFGSTAY---EHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGC 309
K + + + + Q+ T +RAPEV+ + DMWS G
Sbjct: 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV 235
Query: 310 ILIELCSGE-ALFQTHENLEHLAMMERVLGP---------IPQHMLKRVDKPAEKFVRRG 359
I + L SG ++ ++L LA + + G + +L + PA+ +
Sbjct: 236 IFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLC 295
Query: 360 -RLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGY------LIDLLQGLLRYDPSSR 412
RL + +T P+L + + H + G+ DLL LL +P+SR
Sbjct: 296 ERLRGMDSST-----------PKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASR 344
Query: 413 LTAHDALKHPFF 424
+TA +AL HPFF
Sbjct: 345 ITAEEALLHPFF 356
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 78 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 133
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 134 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 186
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 187 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 215
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 134/349 (38%), Gaps = 79/349 (22%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y++ IG G V E VAIK + E T +D ELLK ++ S
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-----LEKCQTSMD--ELLKEI-QAMS 68
Query: 157 RC-----VQIRNWFDYRNHICIVFEML-GPSLYDFLR----KNNYRPFPVD--LVREIGR 204
+C V F ++ + +V ++L G S+ D ++ K ++ +D + I R
Sbjct: 69 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
++LE + ++H IH D+K NIL ++I D+ V+A T
Sbjct: 129 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT--------------- 173
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQT 323
G ++ V T + APEV+ + G+ + D+WS G IEL +G A +
Sbjct: 174 ----GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
+ P+ ML + P G +E +K K R
Sbjct: 230 YP-------------PMKVLMLTLQNDPP---------SLETGVQDKEMLKKYGKSFR-- 265
Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRDYYRRF 432
++ L+ DP R TA + L+H FF + + F
Sbjct: 266 ---------------KMISLCLQKDPEKRPTAAELLRHKFFQKAKNKEF 299
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 96/235 (40%), Gaps = 34/235 (14%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
+ RY++++ IG G FG D+++ E VA+K + +K E EI +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V+ + H+ IV E G L++ R N F D R +QL+ V++
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILF-VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
H +++ H DLK EN L SP P K+ A + + PKS+
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPA----PRLKICAFGYSKSSVLHSQPKST---------- 176
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 177 ----------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 132/321 (41%), Gaps = 51/321 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG VAIK++ + + E+ ++++L
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 70
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + ++ E G ++D+L + R RQ++ V +
Sbjct: 71 --PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQY 126
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H R++H DLK EN+L + +KI D+ F +
Sbjct: 127 CHQKRIVHRDLKAENLLLDADMNIKIADF-------------------------GFSNEF 161
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 162 TVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 220
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKF-----VRRGRLDWPEGATSRESIKAVLKLPRLQ 383
ERVL IP +M + ++F ++RG L E I A + L+
Sbjct: 221 --ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL---EQIMKDRWINAGHEEDELK 275
Query: 384 NLVMQHVDHSAGYLIDLLQGL 404
V +D S ID++ G+
Sbjct: 276 PFVEPELDISDQKRIDIMVGM 296
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
+ Y + ++G+G F V C+ + TG A K++ + K ++ D ++ +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARD----FQKLE 53
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG--------- 203
R C ++++ R H I E ++D + F + RE
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCI 111
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
+Q+LE +A+ H ++H +LKPEN+L S K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 264 KVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
K+ DFG + + T Y +PEV+ +S P D+W+ G IL L G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
++I++ IG G FG+V + T A+K++ + + A E DVL +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL-----VN 146
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ F NH+ +V + +G L L K + P D+ R +++ +
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 205
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK-SSAIKVIDFGS 270
+H L +H D+KP+N+L DVN + RL S +K+ D G+
Sbjct: 206 SIHQLHYVHRDIKPDNVLL-------------------DVNGHIRLADFGSCLKMNDDGT 246
Query: 271 TAYEHQEHNYIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILIELCSGEALFQTHE 325
+ + V T Y +PE++ G+G P CD WS+G + E+ GE F
Sbjct: 247 V-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 301
Query: 326 NLE 328
+E
Sbjct: 302 LVE 304
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 71 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 127 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 179
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 180 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 208
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 73 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 72 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 128 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 180
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 181 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 77 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 132
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 133 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 185
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 186 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 214
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 103/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+K+ R + L+ + Q+ + +
Sbjct: 73 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQICKGME 128
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 129 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 182 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVLEL 147
L S+Y++ +G G FG V + VAIK V I + E ++V+ L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-L 60
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQ 205
LK+ S +++ +WF+ + ++ E P L+DF+ + +L R Q
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
+LE V H+ ++H D+K ENIL D+N +K+
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILI-------------------DLN-------RGELKL 152
Query: 266 IDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT 323
IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 324 HENL 327
E +
Sbjct: 213 DEEI 216
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 103/243 (42%), Gaps = 41/243 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
++I++ IG G FG+V + T A+K++ + + A E DVL +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL-----VN 130
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ F NH+ +V + +G L L K + P D+ R +++ +
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAID 189
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK-SSAIKVIDFGS 270
+H L +H D+KP+N+L DVN + RL S +K+ D G+
Sbjct: 190 SIHQLHYVHRDIKPDNVLL-------------------DVNGHIRLADFGSCLKMNDDGT 230
Query: 271 TAYEHQEHNYIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILIELCSGEALFQTHE 325
+ + V T Y +PE++ G+G P CD WS+G + E+ GE F
Sbjct: 231 V-----QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES 285
Query: 326 NLE 328
+E
Sbjct: 286 LVE 288
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
+ Y + ++G+G F V C+ + TG A K++ + K ++ D ++ +
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARD----FQKLE 52
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG--------- 203
R C ++++ R H I E ++D + F + RE
Sbjct: 53 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCI 110
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
+Q+LE +A+ H ++H +LKPEN+L S K +A+
Sbjct: 111 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 146
Query: 264 KVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
K+ DFG + + T Y +PEV+ +S P D+W+ G IL L G
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 96/236 (40%), Gaps = 47/236 (19%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
+ Y + ++G+G F V C+ + TG A K++ + K ++ D ++ +
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK------LSARD----FQKLE 53
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIG--------- 203
R C ++++ R H I E ++D + F + RE
Sbjct: 54 REARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASHCI 111
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAI 263
+Q+LE +A+ H ++H +LKPEN+L S K +A+
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASK------------------------AKGAAV 147
Query: 264 KVIDFGSTAYEHQEHNY--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
K+ DFG + + T Y +PEV+ +S P D+W+ G IL L G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
S ++ + +G+G FGQV+ + AIK +R ++ ++E+ +L L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 150 -RYDRSGSRCVQIRNWFDYRNHI----------CIVFEML---GPSLYDFLRKNNYRPFP 195
RY + W + RN + + +M +LYD + N
Sbjct: 65 VRYYAA---------WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQ-Q 114
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
D + RQ+LE ++++H +IH DLKP NI +KI D+ + K
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------K 164
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIEL 314
+ +S I +D + + T Y A EV+ G G ++ DM+S+G I E+
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 315 C 315
Sbjct: 225 I 225
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVLEL 147
L S+Y++ +G G FG V + VAIK V I + E ++V+ L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-L 60
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQ 205
LK+ S +++ +WF+ + ++ E P L+DF+ + +L R Q
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
+LE V H+ ++H D+K ENIL D+N +K+
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGELKL 152
Query: 266 IDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT 323
IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 324 HENL 327
E +
Sbjct: 213 DEEI 216
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 105/254 (41%), Gaps = 40/254 (15%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYD 152
+ ++Y++ RKIG G+FG + + +GE VAIK + +K E ++++
Sbjct: 7 VGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIK-LECVKTKHPQLHIESKFYKMMQ--- 62
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
G I+ ++ +V E+LGPSL D + R F + V + Q++ + +
Sbjct: 63 -GGVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEY 120
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST- 271
+H IH D+KP+N L + K + + +IDFG
Sbjct: 121 IHSKNFIHRDVKPDNFLMGLGK------------------------KGNLVYIIDFGLAK 156
Query: 272 ----AYEHQ-----EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
A HQ E+ + T Y + LG+ S D+ S+G +L+ G +Q
Sbjct: 157 KYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216
Query: 323 THENLEHLAMMERV 336
+ ER+
Sbjct: 217 GLKAATKRQKYERI 230
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 131/321 (40%), Gaps = 51/321 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG VAIK++ + + E+ ++++L
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNH--- 73
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + ++ E G ++D+L + R RQ++ V +
Sbjct: 74 --PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQY 129
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H R++H DLK EN+L + +KI D+ F +
Sbjct: 130 CHQKRIVHRDLKAENLLLDADMNIKIADF-------------------------GFSNEF 164
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 165 TVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 223
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKF-----VRRGRLDWPEGATSRESIKAVLKLPRLQ 383
ERVL IP +M + ++F ++RG L E I A + L+
Sbjct: 224 --ERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTL---EQIMKDRWINAGHEEDELK 278
Query: 384 NLVMQHVDHSAGYLIDLLQGL 404
V +D S ID++ G+
Sbjct: 279 PFVEPELDISDQKRIDIMVGM 299
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 38/244 (15%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYRE---AAMTEIDVLEL 147
L S+Y++ +G G FG V + VAIK V I + E ++V+ L
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-L 60
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQ 205
LK+ S +++ +WF+ + ++ E P L+DF+ + +L R Q
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQ 118
Query: 206 LLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKV 265
+LE V H+ ++H D+K ENIL D+N +K+
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGELKL 152
Query: 266 IDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQT 323
IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 153 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 212
Query: 324 HENL 327
E +
Sbjct: 213 DEEI 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 100/241 (41%), Gaps = 39/241 (16%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
S ++ + +G+G FGQV+ + AIK +R ++ ++E+ +L L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYV 64
Query: 150 -RYDRSGSRCVQIRNWFDYRNHI----------CIVFEML---GPSLYDFLRKNNYRPFP 195
RY + W + RN + + +M +LYD + N
Sbjct: 65 VRYYAA---------WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQ-Q 114
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
D + RQ+LE ++++H +IH DLKP NI +KI D+ + K
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA----------K 164
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIEL 314
+ +S I +D + + T Y A EV+ G G ++ DM+S+G I E+
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM 224
Query: 315 C 315
Sbjct: 225 I 225
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 95/235 (40%), Gaps = 34/235 (14%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
+ RY++++ IG G FG D+++ E VA+K + +K E EI +
Sbjct: 18 SDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREI-----INHRSL 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V+ + H+ IV E G L++ R N F D R +QL+ V++
Sbjct: 73 RHPNIVRFKEVILTPTHLAIVMEYASGGELFE--RICNAGRFSEDEARFFFQQLISGVSY 130
Query: 213 MHDLRLIHTDLKPENILF-VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
H +++ H DLK EN L SP P K+ A + +
Sbjct: 131 CHAMQVCHRDLKLENTLLDGSPA----PRLKICA--------------------FGYSKS 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQTHE 325
+ H + V T Y APEV+L + D+WS G L + G F+ E
Sbjct: 167 SVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG+ VA+K++ + + E+ ++++L
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +V E G ++D+L + R RQ++ V +
Sbjct: 73 --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLK EN+L + +KI D+ + FG+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 170 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
ERVL IP +M + +KF+ +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG+ VA+K++ + + E+ ++++L
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +V E G ++D+L + R RQ++ V +
Sbjct: 73 --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLK EN+L + +KI D+ + FG+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 170 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
ERVL IP +M + +KF+ +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 26 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 78
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 79 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 138
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D Y R IK
Sbjct: 139 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 185
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 186 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 235
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 236 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 275
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 113/278 (40%), Gaps = 45/278 (16%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGE---GTFGQVLDCLDRETGETVAIKVVRSIKKYREA 137
K YL G+ + L +GE GT GQV R+TG +A+K +R E
Sbjct: 8 KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEEN 67
Query: 138 AMTEIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVD 197
+D+ +LK +D VQ F + I E++G + + L+K P P
Sbjct: 68 KRILMDLDVVLKSHD--CPYIVQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIP-- 122
Query: 198 LVREIGRQLLECVAFMHDLR----LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
R +G+ + V ++ L+ +IH D+KP NIL +K+ D+ ++ R D
Sbjct: 123 -ERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDD--- 178
Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-----CDMWSVG 308
+ + Y APE I + P D+WS+G
Sbjct: 179 ----------------------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG 216
Query: 309 CILIELCSGEALFQT-HENLEHLAMMERVLGP-IPQHM 344
L+EL +G+ ++ + E L + + P +P HM
Sbjct: 217 ISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM 254
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 130/341 (38%), Gaps = 108/341 (31%)
Query: 97 YKILRKI-GEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
YK+ ++ G G G+VL ++ T E A+K+++ K R +EL R
Sbjct: 19 YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARRE-------VELHWR----A 67
Query: 156 SRCVQI-------RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
S+C I N + R + IV E L G L+ ++ + F EI + +
Sbjct: 68 SQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIG 127
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
E + ++H + + H D+KPEN+L+ T++ P + +K+ D
Sbjct: 128 EAIQYLHSINIAHRDVKPENLLY-------------TSKRPNAI-----------LKLTD 163
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
FG A E G + CDMWS+G I+ L G F ++ L
Sbjct: 164 FGF------------------AKETT-GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL 204
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW--PEGATSRESIKAVLKLPRLQNL 385
I M R +R G+ ++ PE + E +K
Sbjct: 205 -----------AISPGMKTR--------IRMGQYEFPNPEWSEVSEEVKM---------- 235
Query: 386 VMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
L++ LL+ +P+ R+T + + HP+ +
Sbjct: 236 --------------LIRNLLKTEPTQRMTITEFMNHPWIMQ 262
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG+ VA++++ + + E+ ++++L
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +V E G ++D+L + R RQ++ V +
Sbjct: 73 --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLK EN+L + +KI D+ + FG+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
E + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 170 DE------FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
ERVL IP +M + +KF+ +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 48/279 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG+ VA+K++ + + E+ ++++L
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +V E G ++D+L + R RQ++ V +
Sbjct: 73 --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLK EN+L + +KI D+ + FG+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 170 ------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
ERVL IP +M + +KF+ +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 11 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 64 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 123
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D Y R IK
Sbjct: 124 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 170
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 171 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 220
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 221 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 260
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 7 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 64
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 65 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 116
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 117 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 158
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 159 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 104/232 (44%), Gaps = 25/232 (10%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYRE-AAMTEIDVLELLKRYDRS 154
R ++ R + EG F V + D +G A+K + S ++ + A + E+ ++ L +
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 155 GSRC----VQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYR-PFPVDLVREIGRQLLEC 209
C + + ++ E+ L +FL+K R P D V +I Q
Sbjct: 89 VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 210 VAFMHDLR--LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
V MH + +IH DLK EN+L + +K+ D+ S T +++Y S+ + +
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG----SATTISHYPDYSWSAQRRAL- 203
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPC----DMWSVGCILIELC 315
E N +T YR PE+I L ++P D+W++GCIL LC
Sbjct: 204 ----VEEEITRN---TTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 90 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ S D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 22 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 74
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 75 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D Y R IK
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 181
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 232 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 93/217 (42%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
++G G+FG+V D++TG A+K VR ++ +R EL+ + R V +
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAE--------ELMACAGLTSPRIVPL 150
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ I E+L G SL +++ P D Q LE + ++H R++H
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K +N+L S + + D + L K + G +Y
Sbjct: 209 GDVKADNVLLSS---------DGSHAALCDFGHAVCLQPDGLGKSLLTG---------DY 250
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
I T + APEV+LG D+WS C+++ + +G
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 132/343 (38%), Gaps = 79/343 (23%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y++ IG G V E VAIK + E T +D ELLK ++ S
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN-----LEKCQTSMD--ELLKEI-QAMS 63
Query: 157 RC-----VQIRNWFDYRNHICIVFEML-GPSLYDFLR----KNNYRPFPVD--LVREIGR 204
+C V F ++ + +V ++L G S+ D ++ K ++ +D + I R
Sbjct: 64 QCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
++LE + ++H IH D+K NIL ++I D+ V+A T
Sbjct: 124 EVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLAT--------------- 168
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILIELCSGEALFQT 323
G ++ V T + APEV+ + G+ + D+WS G IEL +G A +
Sbjct: 169 ----GGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
Query: 324 HENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQ 383
+ P+ ML + P G +E +K K R
Sbjct: 225 YP-------------PMKVLMLTLQNDPP---------SLETGVQDKEMLKKYGKSFR-- 260
Query: 384 NLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
++ L+ DP R TA + L+H FF +
Sbjct: 261 ---------------KMISLCLQKDPEKRPTAAELLRHKFFQK 288
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 101/229 (44%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 16 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D Y R IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 104/245 (42%), Gaps = 47/245 (19%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETV--AIKVV--RSIKKYREAA--MTEIDVLELL 148
S + L+ IG+G+FG+VL L R E V A+KV+ ++I K +E M+E +VL L
Sbjct: 38 SDFHFLKVIGKGSFGKVL--LARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVL--L 93
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K V + F + + V + + G L+ L++ R F R ++
Sbjct: 94 KNVKHP--FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIA 149
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++H L +++ DLKPENIL L I + D
Sbjct: 150 SALGYLHSLNIVYRDLKPENIL---------------------------LDSQGHIVLTD 182
Query: 268 FGSTAYEHQEHNYIVS----TRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQT 323
FG E+ EHN S T Y APEV+ + D W +G +L E+ G F +
Sbjct: 183 FG-LCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241
Query: 324 HENLE 328
E
Sbjct: 242 RNTAE 246
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG +G+V ++R T E VA+K+V + E EI + +L +
Sbjct: 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHEN-- 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 67 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 118
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 119 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 160
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 161 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V LK+ D+ + + D +S +K
Sbjct: 174 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 213
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
+ V T +Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 214 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 268
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
+ + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 21 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 73
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 74 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 133
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D Y R IK
Sbjct: 134 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 180
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 181 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 230
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 231 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
++G G+FG+V D++TG A+K VR ++ +R V EL+ S R V +
Sbjct: 81 RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 131
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ I E+L G SL +++ P D Q LE + ++H R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILH 189
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K +N+L S + + D + L K + G +Y
Sbjct: 190 GDVKADNVLLSS---------DGSRAALCDFGHALCLQPDGLGKSLLTG---------DY 231
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
I T + APEV++G D+WS C+++ + +G
Sbjct: 232 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 118/279 (42%), Gaps = 48/279 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++L+ IG+G F +V TG+ VA++++ + + E+ ++++L
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNH--- 72
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +V E G ++D+L + R RQ++ V +
Sbjct: 73 --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 128
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLK EN+L + +KI D+ + FG+
Sbjct: 129 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSNE-------------------FTFGNKL 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 170 ------DTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 222
Query: 332 MMERVLGP---IPQHMLKRVDKPAEKFV-----RRGRLD 362
ERVL IP +M + +KF+ +RG L+
Sbjct: 223 --ERVLRGKYRIPFYMSTDCENLLKKFLILNPSKRGTLE 259
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
++G G+FG+V D++TG A+K VR ++ +R V EL+ S R V +
Sbjct: 65 RVGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 115
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ I E+L G SL +++ P D Q LE + ++H R++H
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILH 173
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K +N+L S + + D + L K + G +Y
Sbjct: 174 GDVKADNVLLSS---------DGSRAALCDFGHALCLQPDGLGKSLLTG---------DY 215
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
I T + APEV++G D+WS C+++ + +G
Sbjct: 216 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 91/225 (40%), Gaps = 46/225 (20%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
++G G+FG+V D++TG A+K VR ++ +R EL+ + R V +
Sbjct: 81 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAE--------ELMACAGLTSPRIVPL 131
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ I E+L G SL +++ P D Q LE + ++H R++H
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGC--LPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE--- 277
D+K +N+L S S + DFG +
Sbjct: 190 GDVKADNVLLSS--------------------------DGSHAALCDFGHAVCLQPDGLG 223
Query: 278 -----HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+YI T + APEV+LG D+WS C+++ + +G
Sbjct: 224 KDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 30/217 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
++G G+FG+V D++TG A+K VR ++ +R V EL+ S R V +
Sbjct: 79 RLGRGSFGEVHRMKDKQTGFQCAVKKVR-LEVFR--------VEELVACAGLSSPRIVPL 129
Query: 162 RNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ I E+L G SL +++ P D Q LE + ++H R++H
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRILH 187
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
D+K +N+L S + + D + L K + G +Y
Sbjct: 188 GDVKADNVLLSS---------DGSRAALCDFGHALCLQPDGLGKSLLTG---------DY 229
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
I T + APEV++G D+WS C+++ + +G
Sbjct: 230 IPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 107/244 (43%), Gaps = 50/244 (20%)
Query: 98 KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K+ +K+G G FG+V + ++ T VA+K ++ EA + E +V++ L+
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQH-----D 237
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ V++ + I I+ E + SL DFL+ + P+ + + Q+ E +AF+
Sbjct: 238 KLVKLHAVVT-KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 296
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDY---KVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
IH DL+ NIL + KI D+ +V A+ P K +A + I+FGS
Sbjct: 297 RNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI---------KWTAPEAINFGS-- 345
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLA 331
++ D+WS G +L+E+ + G + N E +
Sbjct: 346 -------------------------FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR 380
Query: 332 MMER 335
+ER
Sbjct: 381 ALER 384
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR--- 153
+++ +KIG G FG++ + T E VAIK+ E + L L R+ +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPMKSRAPQLHLEYRFYKQLG 62
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
SG Q+ + + +V E+LGPSL D + R F + V I QL+ + ++
Sbjct: 63 SGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 121
Query: 214 HDLRLIHTDLKPENILFVSP-----EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
H LI+ D+KPEN L P + + I D+ + A+ D K +P
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL-AKEYIDPETKKHIP---------- 170
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
++EH + T Y + LG S D+ ++G + + G +Q
Sbjct: 171 ------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 126
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V LK+ D+ + + D +S +K G
Sbjct: 127 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVKDSQVG------ 171
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
T +Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 172 --------TVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 221
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
+ + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 222 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 270
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K L+++G+G FG V C L TGE VA+K ++ S +++ EI++L+ L+ +
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ V + R ++ ++ E L SL D+L+ + R + L+ + Q+ + +
Sbjct: 76 IVKYKGV---CYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQICKGME 131
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK-RLPKSSAIKVIDFGS 270
++ R IH DL NIL + +KI D+ +T P D K + P S I
Sbjct: 132 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI------- 184
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ APE + +S D+WS G +L EL
Sbjct: 185 ---------------FWYAPESLTESKFSVASDVWSFGVVLYEL 213
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V LK+ D+ + + D +S +K
Sbjct: 174 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 213
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
+ V T +Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 214 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 268
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
+ + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 114/257 (44%), Gaps = 70/257 (27%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
K GHY+ LG+ L G GTFG+V + TG VA+K++ K +
Sbjct: 9 KIGHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNRQK------IR 50
Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRN-HICIVFEML--------------GPSLYDF 185
+DV+ +KR +I+N +R+ HI +++++ G L+D+
Sbjct: 51 SLDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 186 LRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
+ K+ R ++ R + +Q+L V + H ++H DLKPEN+L + KI D+ +
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGL-- 157
Query: 246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDM 304
S+ + +F T+ + +Y APEVI G ++ P D+
Sbjct: 158 --------------SNMMSDGEFLRTS---------CGSPNYAAPEVISGRLYAGPEVDI 194
Query: 305 WSVGCILIELCSGEALF 321
WS G IL L G F
Sbjct: 195 WSCGVILYALLCGTLPF 211
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR--- 153
+++ +KIG G FG++ + T E VAIK+ E + L L R+ +
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPMKSRAPQLHLEYRFYKQLG 83
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
SG Q+ + + +V E+LGPSL D + R F + V I QL+ + ++
Sbjct: 84 SGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 142
Query: 214 HDLRLIHTDLKPENILFVSP-----EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
H LI+ D+KPEN L P + + I D+ + A+ D K +P
Sbjct: 143 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL-AKEYIDPETKKHIP---------- 191
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
++EH + T Y + LG S D+ ++G + + G +Q
Sbjct: 192 ------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 145
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V LK+ D+ + + D +S +K
Sbjct: 146 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 185
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
+ V T +Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 186 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 240
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
+ + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 34/234 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR--- 153
+++ +KIG G FG++ + T E VAIK+ E + L L R+ +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPMKSRAPQLHLEYRFYKQLG 62
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
SG Q+ + + +V E+LGPSL D + R F + V I QL+ + ++
Sbjct: 63 SGDGIPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYV 121
Query: 214 HDLRLIHTDLKPENILFVSP-----EYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
H LI+ D+KPEN L P + + I D+ + A+ D K +P
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGL-AKEYIDPETKKHIP---------- 170
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
++EH + T Y + LG S D+ ++G + + G +Q
Sbjct: 171 ------YREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 120/289 (41%), Gaps = 49/289 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 173
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V LK+ D+ + + D +S +K G+
Sbjct: 174 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVKDSQVGAV---- 220
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
+Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 221 ----------NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 268
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
+ + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 317
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 97/238 (40%), Gaps = 41/238 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK--YREAAMTEIDVLELLKRYDRS 154
++ ++ +G G FG V + ++ AIK +R + RE M E+ L L+
Sbjct: 7 FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH---- 62
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPS-----LY---DFLRKNNYRPF----------PV 196
V+ N + +N E L PS LY RK N + +
Sbjct: 63 -PGIVRYFNAWLEKNTT----EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERER 117
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
+ I Q+ E V F+H L+H DLKP NI F + +K+ D+ + D
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
L A + H V T+ Y +PE I G +S+ D++S+G IL EL
Sbjct: 178 LTPMPA------------YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 90 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 112/256 (43%), Gaps = 68/256 (26%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
K GHY+ LG+ L G GTFG+V + TG VA+K++ K +
Sbjct: 9 KIGHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNRQK------IR 50
Query: 141 EIDVLELLKRYDRSGSRCVQIRNWFDYRN-HICIVFEML--------------GPSLYDF 185
+DV+ +KR +I+N +R+ HI +++++ G L+D+
Sbjct: 51 SLDVVGKIKR---------EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDY 101
Query: 186 LRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTA 245
+ K+ R ++ R + +Q+L V + H ++H DLKPEN+L + KI D+ ++
Sbjct: 102 ICKHG-RVEEME-ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSN 159
Query: 246 RSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMW 305
+D + + GS Y E ++S R Y PEV D+W
Sbjct: 160 MM-SDGEFLRD----------SCGSPNYAAPE---VISGRLYAGPEV----------DIW 195
Query: 306 SVGCILIELCSGEALF 321
S G IL L G F
Sbjct: 196 SCGVILYALLCGTLPF 211
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT 140
K GHY+ LG+ L G GTFG+V TG VA+K++ +K R +
Sbjct: 14 KIGHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNR-QKIRSLDVV 60
Query: 141 -----EIDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPF 194
EI L+L + +++ + I +V E + G L+D++ KN
Sbjct: 61 GKIRREIQNLKLFRH-----PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--L 113
Query: 195 PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY 254
R + +Q+L V + H ++H DLKPEN+L + KI D+ ++ +D +
Sbjct: 114 DEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMM-SDGEFL 172
Query: 255 KRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ GS Y E ++S R Y PEV D+WS G IL L
Sbjct: 173 RX----------SCGSPNYAAPE---VISGRLYAGPEV----------DIWSSGVILYAL 209
Query: 315 CSGEALF 321
G F
Sbjct: 210 LCGTLPF 216
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 100/229 (43%), Gaps = 39/229 (17%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVV--RSIKKYREAAMTEIDVLELLKRYDRS 154
+ +++ +GEG G+V ++R T E VA+K+V + E EI + ++L +
Sbjct: 8 WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHEN-- 65
Query: 155 GSRCVQIRNWFDYRNHICIVFEML----GPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ ++ +R I + L G L+D + + P P + QL+ V
Sbjct: 66 ------VVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGV 117
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
++H + + H D+KPEN+L + LKI D+ + T Y R
Sbjct: 118 VYLHGIGITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNR-------------- 159
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGE 318
+ N + T Y APE++ + + P D+WS G +L + +GE
Sbjct: 160 ----ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 37/235 (15%)
Query: 87 FALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDV 144
ALGE ++ + ++G G G V + +G +A K++ IK R + E+ V
Sbjct: 1 MALGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQV 60
Query: 145 LELLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIG 203
L ++ + V F I I E M G SL L+K P ++ ++
Sbjct: 61 L-----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVS 113
Query: 204 RQLLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+++ + ++ + +++H D+KP NIL S +K+ D+ V+
Sbjct: 114 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG----------------- 156
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
++ID + N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 157 -QLID--------EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 105/233 (45%), Gaps = 37/233 (15%)
Query: 89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
+GE ++ + ++G G G V R +G +A K++ IK R + E+ VL
Sbjct: 10 VGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVL- 68
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
++ + V F I I E M G SL L++ + P +++ ++
Sbjct: 69 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIA 122
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
+L +A++ + +++H D+KP NIL S +K+ D+ V+ +
Sbjct: 123 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 164
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ID S A N V TR Y APE + G +S D+WS+G L+EL G
Sbjct: 165 LID--SMA------NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 121/286 (42%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 12 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 65 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 124
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH +L+ NIL KI D+ + AR D Y R IK
Sbjct: 125 NYIHRNLRAANILVSDTLSCKIADFGL-ARLIEDNEYTAREGAKFPIK------------ 171
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 172 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 221
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 222 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 261
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 90 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAM--TEIDVLELLKRYD 152
Y++++ IG G FG+V + T + A+K++ + K ++A E D++
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 131
Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ VQ+ F ++ +V E M G L + + +NY P R +++ +
Sbjct: 132 -NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALD 187
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+H + IH D+KP+N+L L KS +K+ DFG+
Sbjct: 188 AIHSMGFIHRDVKPDNML---------------------------LDKSGHLKLADFGTC 220
Query: 272 AYEHQEH----NYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEALF 321
++E + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 88 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 10 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 69 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 125
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V LK+ D+ + + D +S +K
Sbjct: 126 HGIVHSDLKPANFLIVDG-MLKLIDFGIANQMQPDT--------TSVVK----------- 165
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
+ V T +Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 166 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 220
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
+ + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 221 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 269
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 92
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 93 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 147
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 148 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 185
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 186 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 90 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 106/256 (41%), Gaps = 60/256 (23%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y++L+ IG+G F +V TG+ VA+K++ T+++ L K +
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDK---------TQLNSSSLQKLF----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEML--------------GPSLYDFLRKNNYRPFPVDLVREI 202
R V+I ++ N I +FE++ G ++D+L + R
Sbjct: 62 REVRIXKVLNHPN-IVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXK--EKEARAK 118
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
RQ++ V + H ++H DLK EN+L + +KI D+ +
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNE---------------- 162
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALF 321
FG+ + Y APE+ G + P D+WS+G IL L SG F
Sbjct: 163 ---FTFGNKL------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
Query: 322 QTHENLEHLAMMERVL 337
+NL+ L ERVL
Sbjct: 214 DG-QNLKEL--RERVL 226
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 121/289 (41%), Gaps = 49/289 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 129
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V LK+ D+ + + D +S +K
Sbjct: 130 HGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDT--------TSVVK----------- 169
Query: 276 QEHNYIVSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEALFQTH 324
+ V T +Y PE I + S D+WS+GCIL + G+ FQ
Sbjct: 170 ---DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ-- 224
Query: 325 ENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
+ + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 225 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 273
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 90 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 90 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 144
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 145 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 182
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 183 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 88 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 104/256 (40%), Gaps = 49/256 (19%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYD 152
+++ + +G+G+FG+V ++T + AIK ++ + E M E VL L +
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH- 78
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREI--GRQLLE 208
+ F + ++ V E L G +Y + + DL R +++
Sbjct: 79 ---PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-----DLSRATFYAAEIIL 130
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ F+H +++ DLK +NIL L K IK+ DF
Sbjct: 131 GLQFLHSKGIVYRDLKLDNIL---------------------------LDKDGHIKIADF 163
Query: 269 G---STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QT 323
G + N T Y APE++LG +++ D WS G +L E+ G++ F Q
Sbjct: 164 GMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD 223
Query: 324 HENLEHLAMMERVLGP 339
E L H M+ P
Sbjct: 224 EEELFHSIRMDNPFYP 239
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAM--TEIDVLELLKRYD 152
Y++++ IG G FG+V + T + A+K++ + K ++A E D++
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 126
Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ VQ+ F ++ +V E M G L + + +NY P R +++ +
Sbjct: 127 -NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALD 182
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+H + IH D+KP+N+L L KS +K+ DFG+
Sbjct: 183 AIHSMGFIHRDVKPDNML---------------------------LDKSGHLKLADFGTC 215
Query: 272 AYEHQEH----NYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEALF 321
++E + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 87 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 141
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ TA+ + P+S +
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLS--------PESKQARA---- 188
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 189 ---------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 91 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 145
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 183
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 184 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 88 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
+ +LR IG G++ +VL ++T A+KVV KK +ID ++ K S
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
V + + F + + V E + G ++ R+ R P + R ++ +
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 124
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS--PTDVNYYKRLPKSSAIKVIDFG 269
++H+ +I+ DLK +N+L S ++K+ DY + P D
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----------------- 167
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
+ T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 168 ---------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 91 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 145
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 146 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 183
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 184 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
+ +LR IG G++ +VL ++T A+KVV KK +ID ++ K S
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
V + + F + + V E + G ++ R+ R P + R ++ +
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 120
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS--PTDVNYYKRLPKSSAIKVIDFG 269
++H+ +I+ DLK +N+L S ++K+ DY + P D
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----------------- 163
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
+ T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 164 ---------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 99/232 (42%), Gaps = 39/232 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
+ +LR IG G++ +VL ++T A+KVV KK +ID ++ K S
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVV---KKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
V + + F + + V E + G ++ R+ R P + R ++ +
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 135
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS--PTDVNYYKRLPKSSAIKVIDFG 269
++H+ +I+ DLK +N+L S ++K+ DY + P D
Sbjct: 136 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTT----------------- 178
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
+ T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 179 ---------SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 48/238 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK--KYREAAM--TEIDVLELLKRYD 152
Y++++ IG G FG+V + T + A+K++ + K ++A E D++
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 153 RSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ VQ+ F ++ +V E M G L + + +NY P R +++ +
Sbjct: 131 ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM--SNY-DVPEKWARFYTAEVVLALD 187
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+H + IH D+KP+N+L L KS +K+ DFG+
Sbjct: 188 AIHSMGFIHRDVKPDNML---------------------------LDKSGHLKLADFGTC 220
Query: 272 AYEHQEH----NYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGEALF 321
++E + V T Y +PEV+ G + CD WSVG L E+ G+ F
Sbjct: 221 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 101/252 (40%), Gaps = 49/252 (19%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRS----IKKYREAAMTEIDVLELLKRYDRSGS 156
+ +G+G+FG+V ++T + AIK ++ + E M E VL L +
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH----P 78
Query: 157 RCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVAF 212
+ F + ++ V E L G +Y + + DL R +++ + F
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKF-----DLSRATFYAAEIILGLQF 133
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG--- 269
+H +++ DLK +NIL L K IK+ DFG
Sbjct: 134 LHSKGIVYRDLKLDNIL---------------------------LDKDGHIKIADFGMCK 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF--QTHENL 327
+ N T Y APE++LG +++ D WS G +L E+ G++ F Q E L
Sbjct: 167 ENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 226
Query: 328 EHLAMMERVLGP 339
H M+ P
Sbjct: 227 FHSIRMDNPFYP 238
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 65
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 66 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 158
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 159 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 64
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 65 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 119
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 120 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 157
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 158 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 107/253 (42%), Gaps = 43/253 (16%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVR-----SIKKYREAAMTEIDVLELLKRYDRSGSR 157
IG G FG+V G+ VA+K R I + E E + +LK + R
Sbjct: 15 IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALR 72
Query: 158 CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
V ++ ++C+V E GP R + + P D++ Q+ + ++HD
Sbjct: 73 GVCLK-----EPNLCLVMEFARGGP----LNRVLSGKRIPPDILVNWAVQIARGMNYLHD 123
Query: 216 ---LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ +IH DLK NIL + K+ + ++ + +K+ DFG
Sbjct: 124 EAIVPIIHRDLKSSNILILQ----KVENGDLSNK---------------ILKITDFGLAR 164
Query: 273 YEHQEHNYIVSTRH-YRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL--EH 329
H+ + + + APEVI +S D+WS G +L EL +GE F+ + L +
Sbjct: 165 EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAY 224
Query: 330 LAMMERVLGPIPQ 342
M ++ PIP
Sbjct: 225 GVAMNKLALPIPS 237
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 87 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 141
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ TA+ + P+S +
Sbjct: 142 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLS--------PESKQARA---- 188
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 189 ---------NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 100/228 (43%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 71
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 72 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 126
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ TA+ + P+S +
Sbjct: 127 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFG-TAKVLS--------PESKQARA---- 173
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 174 ---------NXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 67
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 68 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 122
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 161 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 117/294 (39%), Gaps = 59/294 (20%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
Y IL++IG G +V L+ E + AIK V + + + + + L + +
Sbjct: 30 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 88
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-NYRPFPVDLVREIGRQLLECVAFMHD 215
+ +++ ++ +I +V E L +L+K + P+ + + +LE V +H
Sbjct: 89 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQ 145
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
++H+DLKP N L V +K+IDFG
Sbjct: 146 HGIVHSDLKPANFLIV----------------------------DGMLKLIDFGIANQMQ 177
Query: 276 QEHNYI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCILIELCSGEA 319
+ + V T +Y PE I + S D+WS+GCIL + G+
Sbjct: 178 PDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT 237
Query: 320 LFQTHENLEHLAMMERVLGP--------IPQHMLKRVDKPAEKFVRRGRLDWPE 365
FQ + + ++ + ++ P IP+ L+ V K K + R+ PE
Sbjct: 238 PFQ--QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPE 289
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 97/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ L
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 66
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 67 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 159
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 160 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 35/230 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
+ +LR IG G++ +VL ++T A++VV KK +ID ++ K S
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVV---KKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 157 R---CVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
V + + F + + V E + G ++ R+ R P + R ++ +
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ---RKLPEEHARFYSAEISLALN 167
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H+ +I+ DLK +N+L S ++K+ DY + ++ D ST
Sbjct: 168 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKE---------------GLRPGDTTST 212
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
T +Y APE++ G + + D W++G ++ E+ +G + F
Sbjct: 213 ---------FCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRS 154
+++ ++G G FG VL + ++TGE VAIK R K RE EI +++ L +
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 155 GSRCVQ--IRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVA 211
+R V ++ + + G L +L + N +R + + +
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H+ R+IH DLKPENI+ P + D+ Y K L D G
Sbjct: 136 YLHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGEL 179
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
E V T Y APE++ ++ D WS G + E +G
Sbjct: 180 CTE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 94/226 (41%), Gaps = 27/226 (11%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRS 154
+++ ++G G FG VL + ++TGE VAIK R K RE EI +++ L +
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 155 GSRCVQ--IRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVA 211
+R V ++ + + G L +L + N +R + + +
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 136
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++H+ R+IH DLKPENI+ P + D+ Y K L D G
Sbjct: 137 YLHENRIIHRDLKPENIVLQ-------PGPQRLIHKIIDLGYAKEL---------DQGEL 180
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
E V T Y APE++ ++ D WS G + E +G
Sbjct: 181 CTE------FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 51/110 (46%), Gaps = 12/110 (10%)
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E V F+H L+H DLKP NI F + +K+ D+ + D L A
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPA-- 229
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+ H V T+ Y +PE I G +S+ D++S+G IL EL
Sbjct: 230 ----------YATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 64
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 162
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 163 -------RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 216 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 235
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 236 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 89
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 146
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 187
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 188 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 241 YKRISRVEFTFPD------------FVT-------EGAR--------------------- 260
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 261 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 289
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
+ I R +G+G FG V +R++ +A+KV+ K E A E + ++ +S
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVE--IQSHL 69
Query: 157 RCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
R I + Y R ++ + + LG ++Y L+K + F +L ++
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLSR--FDEQRTATYITELANALS 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS--------------------- 165
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + T Y PE+I G D+WS+G + E G F+ H E
Sbjct: 166 -----RRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 332 MMERVLGPIP 341
+ RV P
Sbjct: 221 RISRVEFTFP 230
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 125
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 167 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 220 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 239
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 240 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 36 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 89
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 146
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 187
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 188 -------RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 241 YKRISRVEFTFPD------------FVT-------EGAR--------------------- 260
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 261 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 289
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 64
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSS------------------- 162
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 163 -------RRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 216 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 235
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 236 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 27 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 80
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 81 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 137
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 178
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 179 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 232 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 251
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 252 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 280
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 125/338 (36%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 125
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE I G D+WS+G + E G+ F+ + E
Sbjct: 167 -------RRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 220 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 239
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 240 ---------DLISRLLKHNPSQRPXLREVLEHPWITAN 268
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 165 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 24 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 76
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 77 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 136
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 137 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 183
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 184 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 233
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 234 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 114/276 (41%), Gaps = 46/276 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMT----EIDVLELLKRYD 152
++IL+ IG G FG+V + + A+K++ + + A E DVL +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVL-----VN 130
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+ F N++ +V + +G L L K R P ++ R +++ +
Sbjct: 131 GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAID 189
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+H L +H D+KP+NIL ++++ D+ S +K+++ G+
Sbjct: 190 SVHQLHYVHRDIKPDNILMDMNGHIRLADF------------------GSCLKLMEDGTV 231
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILIELCSGEALFQTHEN 326
+ + V T Y +PE++ + + CD WS+G + E+ GE F
Sbjct: 232 -----QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 327 LEHLAMM----ERVLGPIPQHMLKRVDKPAEKFVRR 358
+E + ER P + V + A+ +RR
Sbjct: 287 VETYGKIMNHKERFQFPT---QVTDVSENAKDLIRR 319
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 67
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 68 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 124
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 165
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 166 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 219 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 238
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 239 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 267
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 51/236 (21%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
K L +IG G +G V + + +G+ +A+K +RS +E +D L+++ R S
Sbjct: 25 KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMD-LDVVMR----SSD 79
Query: 158 CVQIRNWFD--YRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI-GRQLLECVAFMH 214
C I ++ +R C + L + +D K Y + EI G+ L V ++
Sbjct: 80 CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 215 ----DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
+L++IH D+KP NIL L +S IK+ DFG
Sbjct: 140 HLKENLKIIHRDIKPSNIL---------------------------LDRSGNIKLCDFGI 172
Query: 271 TAYEHQEHNYIVSTRH-----YRAPEVI----LGLGWSYPCDMWSVGCILIELCSG 317
+ Q + I TR Y APE I G+ D+WS+G L EL +G
Sbjct: 173 SG---QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F V+ + T AIK++ IK+ + +T E DV+ R D
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM---SRLD 95
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 96 HP----FFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 149
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 150 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 187
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 188 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 101/250 (40%), Gaps = 38/250 (15%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
+ I R +G+G FG V +R++ +A+KV+ K E A E + ++ +S
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVE--IQSHL 69
Query: 157 RCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
R I + Y R ++ + + LG ++Y L+K + F +L ++
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLSR--FDEQRTATYITELANALS 126
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 127 YCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSS--------------------- 165
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ T Y PE+I G D+WS+G + E G F+ H E
Sbjct: 166 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYR 220
Query: 332 MMERVLGPIP 341
+ RV P
Sbjct: 221 RISRVEFTFP 230
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 51/275 (18%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKV-----VRSIKKYREAAMTEIDVL 145
E + Y++ +G+G FG V VAIKV V ++ ++V
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 146 ELLKRYDRSG-SRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI 202
L K G +++ +WF+ + +V E P+ L+D++ + P R
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCF 144
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
Q++ + H ++H D+K ENIL D+ +
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILI-------------------DL-------RRGC 178
Query: 263 IKVIDFGSTAYEHQE-HNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEAL 320
K+IDFGS A H E + TR Y PE I + + P +WS+G +L ++ G+
Sbjct: 179 AKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP 238
Query: 321 FQ-------------THENLEHLAMMERVLGPIPQ 342
F+ H + + A++ R L P P
Sbjct: 239 FERDQEILEAELHFPAHVSPDCCALIRRCLAPKPS 273
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 25 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 77
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 78 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 137
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 138 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 184
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 185 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 234
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 235 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 22 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 74
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 75 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 134
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 135 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 181
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 182 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 231
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 232 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 -------RRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 -------RRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 18 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 70
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 71 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 130
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 131 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 177
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 178 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 227
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 228 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 65
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 122
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 163
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 164 -------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 217 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 236
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 237 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 16 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 16 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 119/333 (35%), Gaps = 89/333 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA----MTEIDVLELLKRYD 152
+ I+R +G+G FG V +++ +A+KV+ + +E EI++ L+
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-- 73
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+++ N+F R I ++ E P LY L+K+ F +L + +
Sbjct: 74 ---PNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGR--FDEQRSATFMEELADAL 127
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
+ H+ ++IH D+KPEN+L LKI D+ + +P+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--------------------- 166
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
+ T Y PE+I G D+W G + E G F +
Sbjct: 167 -----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------- 214
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
P H T R + LK P +
Sbjct: 215 ----------PSHT----------------------ETHRRIVNVDLKFPPFLS------ 236
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
D S DL+ LLRY P RL ++HP+
Sbjct: 237 DGSK----DLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 165 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 38/228 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---IKKYREAAMT-EIDVLELLKRYD 152
+K + +GEG+F + + T AIK++ IK+ + +T E DV+ L
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEML---GPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
++ +F +++ + F + L ++RK F R +++
Sbjct: 88 ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 142
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+ ++H +IH DLKPENIL +++I D+ KV+
Sbjct: 143 LEYLHGKGIIHRDLKPENILLNEDMHIQITDF-------------------GTAKVL--- 180
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
S + N V T Y +PE++ D+W++GCI+ +L +G
Sbjct: 181 SPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G FG+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 17 KLVERLGAGQFGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 69
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 70 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 130 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDNEXTAREGAKFPIK------------ 176
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 177 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 226
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 227 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 62
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 119
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 160
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 161 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 214 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 233
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 234 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 262
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 165 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 -------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 215 YKRISRVEFTFPDFV-------------------TEGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 125
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 166
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 167 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 220 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 239
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 240 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 95/238 (39%), Gaps = 56/238 (23%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR--SIKKYREA-AMTEIDVLELL----- 148
+K + IG G FGQV R G+T IK V+ + K RE A+ ++D + ++
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHYNGC 72
Query: 149 ------------KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPV 196
K RS ++C+ I+ F + +L ++ K
Sbjct: 73 WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKG-----------TLEQWIEKRRGEKLDK 121
Query: 197 DLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKR 256
L E+ Q+ + V ++H +LI+ DLKP NI V + +KI D+ + D KR
Sbjct: 122 VLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKND---GKR 178
Query: 257 LPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
++ Y +PE I + D++++G IL EL
Sbjct: 179 XRSKGTLR----------------------YMSPEQISSQDYGKEVDLYALGLILAEL 214
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ + T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 165 -------RRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 218 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 128/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 165 -------RRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 120/336 (35%), Gaps = 87/336 (25%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R S
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 157 -----RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+++ +F + ++ E P + F +L ++
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEY-APRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------------------- 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 167 -----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
+ RV P FV EGA
Sbjct: 222 RISRVEFTFPD------------FV-------TEGAR----------------------- 239
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 240 -------DLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 64
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 121
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 162
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 163 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 216 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 235
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 236 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 264
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K + ++G+G FG V C L TG VA+K ++ S + EI +L+ L
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 72
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
R V ++ R + +V E L PS L DFL+++ R +D R + Q+ +
Sbjct: 73 IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 125
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY-KRLPKSSAIKVID 267
+ ++ R +H DL NIL S ++KI D+ + P D +YY R P S I
Sbjct: 126 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 181
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
+ APE + +S D+WS G +L EL CS A
Sbjct: 182 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 223
Query: 321 F 321
F
Sbjct: 224 F 224
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 215 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K + ++G+G FG V C L TG VA+K ++ S + EI +L+ L
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 85
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
R V ++ R + +V E L PS L DFL+++ R +D R + Q+ +
Sbjct: 86 IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 138
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY-KRLPKSSAIKVID 267
+ ++ R +H DL NIL S ++KI D+ + P D +YY R P S I
Sbjct: 139 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 194
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
+ APE + +S D+WS G +L EL CS A
Sbjct: 195 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 236
Query: 321 F 321
F
Sbjct: 237 F 237
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 120/336 (35%), Gaps = 87/336 (25%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R S
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 68
Query: 157 -----RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVA 211
+++ +F + ++ E P + F +L ++
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEY-APRGEVYKELQKLSKFDEQRTATYITELANALS 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
+ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 128 YCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS--------------------- 166
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 167 -----RRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 221
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
+ RV P FV EGA
Sbjct: 222 RISRVEFTFPD------------FV-------TEGAR----------------------- 239
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 240 -------DLISRLLKHNPSQRPMLREVLEHPWITAN 268
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++++++G G FG+V + G T VAIK ++ E+ + E +++ LK
Sbjct: 12 QLIKRLGNGQFGEVW--MGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKH-----D 64
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ VQ+ I IV E + SL DFL+ R + + ++ Q+ +A++
Sbjct: 65 KLVQLYAVVS-EEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIER 123
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+ IH DL+ NIL + KI D+ + AR D R IK
Sbjct: 124 MNYIHRDLRSANILVGNGLICKIADFGL-ARLIEDNEXTARQGAKFPIK----------- 171
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
+ APE L ++ D+WS G +L EL + G + N E L +E
Sbjct: 172 -----------WTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVE 220
Query: 335 R 335
R
Sbjct: 221 R 221
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 98 KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVRSI--KKYREAAMTEIDVLELL-KR 150
K +R +GEG FG+V L C D TGE VA+K +++ ++R EID+L L
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ C + + + + + + LG SL D+L +++ + L +Q+ E +
Sbjct: 77 HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHSIGLAQLLL---FAQQICEGM 130
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
A++H IH +L N+L + +KI D+ + P YY +V + G
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY---------RVREDGD 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
S + APE + + Y D+WS G L EL
Sbjct: 182 ------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 143/390 (36%), Gaps = 133/390 (34%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK------KYREAAMTEIDVLE 146
L +Y + IG+G++G V ++ +T AIK++ K K E TE+ +++
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLR---------------KNN 190
L ++ ++ +IC+V E+ G L D L K
Sbjct: 84 KLHH-----PNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQ 138
Query: 191 YRPFPV-----------------------DLVREIGRQLLECVAFMHDLRLIHTDLKPEN 227
P P L+ I RQ+ + ++H+ + H D+KPEN
Sbjct: 139 ICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPEN 198
Query: 228 ILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN---YIVST 284
LF + KS IK++DFG + ++ +N Y ++T
Sbjct: 199 FLFST-------------------------NKSFEIKLVDFGLSKEFYKLNNGEYYGMTT 233
Query: 285 R----HYRAPEVILGLGWSY--PCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLG 338
+ ++ APEV+ SY CD WS G +L HL +M V
Sbjct: 234 KAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLL-----------------HLLLMGAV-- 274
Query: 339 PIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSAGYLI 398
P P G ++I VL + L ++ +++ +
Sbjct: 275 PFP------------------------GVNDADTISQVLN----KKLCFENPNYNVLSPL 306
Query: 399 --DLLQGLLRYDPSSRLTAHDALKHPFFTR 426
DLL LL + R A AL+HP+ ++
Sbjct: 307 ARDLLSNLLNRNVDERFDAMRALQHPWISQ 336
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 162 -------RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 215 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 274 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 326
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 327 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 386
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 387 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 429
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 430 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 46/241 (19%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K + ++G+G FG V C L TG VA+K ++ S + EI +L+ L
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 73
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
R V ++ R + +V E L PS L DFL+++ R +D R + Q+ +
Sbjct: 74 IVKYRGV---SYGPGRQSLRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 126
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYY-KRLPKSSAIKVID 267
+ ++ R +H DL NIL S ++KI D+ + P D +YY R P S I
Sbjct: 127 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPI---- 182
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
+ APE + +S D+WS G +L EL CS A
Sbjct: 183 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 224
Query: 321 F 321
F
Sbjct: 225 F 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
+GE ++ + ++G G G V + +G +A K++ IK R + E+ VL
Sbjct: 62 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 120
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
++ + V F I I E M G SL L+K P ++ ++
Sbjct: 121 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 174
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
+++ + ++ + +++H D+KP NIL S +K+ D+ V+ +
Sbjct: 175 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------ 216
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ID S A N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 217 LID--SMA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 39/239 (16%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLK---- 149
S ++ + +G+G FGQV+ + AIK +R ++ ++E+ +L L
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYV 64
Query: 150 -RYDRSGSRCVQIRNWFDYRNHICIVFEMLGPS-------------LYDFLRKNNYRPFP 195
RY + W + RN + + S LYD + N
Sbjct: 65 VRYYAA---------WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQ-Q 114
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
D + RQ+LE ++++H +IH +LKP NI +KI D+ + K
Sbjct: 115 RDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA----------K 164
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILIE 313
+ +S I +D + + T Y A EV+ G G ++ D +S+G I E
Sbjct: 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 39/241 (16%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKR 150
+ + L +G+G+FG+V+ + T E AIK+++ + E M E VL LL +
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLL 207
Q+ + F + + V E + G +Y + ++ P V EI L
Sbjct: 79 ----PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
F+H +I+ DLK +N++ S ++KI D+ + D
Sbjct: 135 ----FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMD----------------- 173
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
G T E T Y APE+I + D W+ G +L E+ +G+ F +
Sbjct: 174 -GVTTRE------FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED 226
Query: 328 E 328
E
Sbjct: 227 E 227
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
+GE ++ + ++G G G V + +G +A K++ IK R + E+ VL
Sbjct: 27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 85
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
++ + V F I I E M G SL L+K P ++ ++
Sbjct: 86 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 139
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
+++ + ++ + +++H D+KP NIL S +K+ D+ V+ +
Sbjct: 140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------ 181
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ID S A N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 182 LID--SMA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 65
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 122
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI ++ + +P+
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS------------------- 163
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 164 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 217 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 236
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 237 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 265
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 44/244 (18%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY 151
++ +++ +KIG G FG++ + T E VAIK+ E + L L R+
Sbjct: 1 SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL--------EPIKSRAPQLHLEYRF 52
Query: 152 DR--SGSRCV-QIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
+ S + V Q+ + + +V E+LGPSL D + R F + V I QL+
Sbjct: 53 YKQLSATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLIT 111
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H LI+ D+KPEN L P + AI +IDF
Sbjct: 112 RMEYVHTKSLIYRDVKPENFLVGRPG----------------------TKRQHAIHIIDF 149
Query: 269 GSTA----------YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGE 318
G ++EH + T Y + LG S D+ ++G + + G
Sbjct: 150 GLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGS 209
Query: 319 ALFQ 322
+Q
Sbjct: 210 LPWQ 213
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 34/224 (15%)
Query: 98 KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVRSI--KKYREAAMTEIDVLELL-KR 150
K +R +GEG FG+V L C D TGE VA+K +++ ++R EID+L L
Sbjct: 17 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+ C + + + + + + LG SL D+L +++ + + +Q+ E +
Sbjct: 77 HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 130
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
A++H IH +L N+L + +KI D+ + P YY +V + G
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY---------RVREDGD 181
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
S + APE + + Y D+WS G L EL
Sbjct: 182 ------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYEL 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 98/241 (40%), Gaps = 47/241 (19%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
+ +G G FG+V++ G+ VA+K+++S +EA M+E+ ++ L +++
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 154 ---------SGSRCVQIRNWFDYRNHICIV----FEMLGPSLY-----DFLRKNNYRPFP 195
G + I + Y + + + MLGPSL + L K + RP
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 196 VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
+ + Q+ + +AF+ IH D+ N+L + KI D+ + D NY
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 216
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
+ +K + APE I ++ D+WS G +L E+
Sbjct: 217 KGNARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIF 254
Query: 316 S 316
S
Sbjct: 255 S 255
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 97/246 (39%), Gaps = 45/246 (18%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++IL+ IG G F +V ++TG+ A+K+ + K+ E+ + +G
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKI---MNKWDMLKRGEVSCFREERDVLVNGD 119
Query: 157 R--CVQIRNWFDYRNHICIVFEM-LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
R Q+ F N++ +V E +G L L K R P ++ R +++ + +
Sbjct: 120 RRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSV 178
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
H L +H D+KP+NIL L + I++ DFGS
Sbjct: 179 HRLGYVHRDIKPDNIL---------------------------LDRCGHIRLADFGSCLK 211
Query: 274 EHQEHNY----IVSTRHYRAPEVILGLGWSY-------PCDMWSVGCILIELCSGEALFQ 322
+ V T Y +PE++ +G CD W++G E+ G+ F
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
Query: 323 THENLE 328
E
Sbjct: 272 ADSTAE 277
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 100/246 (40%), Gaps = 40/246 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIK---KYREAAMTEIDVLELLKRYDR 153
Y++ + IG+G F +V TG VA+K++ + + E+ ++++L
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH--- 73
Query: 154 SGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
V++ + + +V E G ++D+L + R RQ++ V +
Sbjct: 74 --PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQY 129
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
H ++H DLK EN+L +KI D+ F +
Sbjct: 130 CHQKYIVHRDLKAENLLLDGDMNIKIADF-------------------------GFSNEF 164
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILIELCSGEALFQTHENLEHLA 331
+ + + Y APE+ G + P D+WS+G IL L SG F +NL+ L
Sbjct: 165 TVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNLKELR 223
Query: 332 MMERVL 337
ERVL
Sbjct: 224 --ERVL 227
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 118/333 (35%), Gaps = 89/333 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA----MTEIDVLELLKRYD 152
+ I R +G+G FG V +++ +A+KV+ + +E EI++ L+
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-- 74
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+++ N+F R I ++ E P LY L+K+ F +L + +
Sbjct: 75 ---PNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGR--FDEQRSATFMEELADAL 128
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
+ H+ ++IH D+KPEN+L LKI D+ + +P+
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--------------------- 167
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
+ T Y PE+I G D+W G + E G F +
Sbjct: 168 -----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------- 215
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
P H T R + LK P +
Sbjct: 216 ----------PSHT----------------------ETHRRIVNVDLKFPPFLS------ 237
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
D S DL+ LLRY P RL ++HP+
Sbjct: 238 DGSK----DLISKLLRYHPPQRLPLKGVMEHPW 266
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 127/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++++ +A+KV+ +A + + V L+R +S
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 66
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K F +L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQK--LSKFDEQRTATYITELANA 123
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI ++ + +P+
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSS------------------- 164
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 165 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P FV EGA
Sbjct: 218 YKRISRVEFTFPD------------FV-------TEGAR--------------------- 237
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 238 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 266
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 118/333 (35%), Gaps = 89/333 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAA----MTEIDVLELLKRYD 152
+ I R +G+G FG V +++ +A+KV+ + +E EI++ L+
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH-- 73
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECV 210
+++ N+F R I ++ E P LY L+K+ F +L + +
Sbjct: 74 ---PNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGR--FDEQRSATFMEELADAL 127
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
+ H+ ++IH D+KPEN+L LKI D+ + +P+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS--------------------- 166
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
+ T Y PE+I G D+W G + E G F +
Sbjct: 167 -----LRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS------- 214
Query: 331 AMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHV 390
P H T R + LK P +
Sbjct: 215 ----------PSHT----------------------ETHRRIVNVDLKFPPFLS------ 236
Query: 391 DHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
D S DL+ LLRY P RL ++HP+
Sbjct: 237 DGSK----DLISKLLRYHPPQRLPLKGVMEHPW 265
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V +++ +A+KV+ +A + + V L+R +S
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 60
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 117
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H R+IH D+KPEN+L S LKI D+ + +P+
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 158
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + E
Sbjct: 159 -------RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 212 YKRISRVEFTFPDFV-------------------TEGAR--------------------- 231
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 232 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 260
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 92/235 (39%), Gaps = 37/235 (15%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
++ +KIG G FG++ + T E VAIK+ IK E K+ +G
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLE---YRFYKQLGSAGEG 58
Query: 158 CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
Q+ + + +V E+LGPSL D + R F + V I QLL + ++H
Sbjct: 59 LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYVHSKN 117
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-------- 269
LI+ D+KPEN L R K I +IDFG
Sbjct: 118 LIYRDVKPENFLI--------------GRQGNK--------KEHVIHIIDFGLAKEYIDP 155
Query: 270 --STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQ 322
++EH + T Y + LG S D+ ++G + + G +Q
Sbjct: 156 ETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 50/234 (21%)
Query: 98 KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVRSIK--KYREAAMTEIDVL-----E 146
K +R +GEG FG+V L C D TGE VA+K +++ ++R EID+L E
Sbjct: 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 147 LLKRY----DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
+ +Y + +G+ +Q+ + + LG SL D+L +++ + L
Sbjct: 94 HIIKYKGCCEDAGAASLQL----------VMEYVPLG-SLRDYLPRHSIGLAQLLL---F 139
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+Q+ E +A++H IH DL N+L + +KI D+ + P Y
Sbjct: 140 AQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXY-------- 191
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+V + G S + APE + + Y D+WS G L EL +
Sbjct: 192 -RVREDGD------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 89 LGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLE 146
+GE ++ + ++G G G V + +G +A K++ IK R + E+ VL
Sbjct: 19 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL- 77
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQ 205
++ + V F I I E M G SL L+K P ++ ++
Sbjct: 78 ----HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIA 131
Query: 206 LLECVAFMHDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
+++ + ++ + +++H D+KP NIL S +K+ D+ V+ +
Sbjct: 132 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG------------------Q 173
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
+ID S A N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 174 LID--SMA------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 95/243 (39%), Gaps = 58/243 (23%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS-- 154
Y +++ IG G FG+V ++VR + AM + E++KR D +
Sbjct: 77 YDVVKVIGRGAFGEV--------------QLVRHKASQKVYAMKLLSKFEMIKRSDSAFF 122
Query: 155 -----------GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREI 202
VQ+ F ++ +V E M G L + + +NY P +
Sbjct: 123 WEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM--SNYD-VPEKWAKFY 179
Query: 203 GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSA 262
+++ + +H + LIH D+KP+N+L +LK+ D+ +
Sbjct: 180 TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMK---------------- 223
Query: 263 IKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILIELCSGE 318
T H + V T Y +PEV+ G + CD WSVG L E+ G+
Sbjct: 224 -----MDETGMVHCDT--AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGD 276
Query: 319 ALF 321
F
Sbjct: 277 TPF 279
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 243
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 304 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 346
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 347 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 243
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 244 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 303
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 304 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 346
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 347 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 243
Query: 161 IRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
+ I IV E M SL DFL+ + + + ++ Q+ +A++ + +
Sbjct: 244 LYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
H DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 303 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 346
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 347 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 41/286 (14%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K++ ++G G G+V + G T VA+K ++ +A + E ++++ L+
Sbjct: 16 KLVERLGAGQAGEV--WMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQH-----Q 68
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
R V++ I M SL DFL+ + ++ + ++ Q+ E +AF+ +
Sbjct: 69 RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER 128
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
IH DL+ NIL KI D+ + AR D R IK
Sbjct: 129 NYIHRDLRAANILVSDTLSCKIADFGL-ARLIEDAEXTAREGAKFPIK------------ 175
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE I ++ D+WS G +L E+ + G + N E + +ER
Sbjct: 176 ----------WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER 225
Query: 336 VLGPIPQHMLKRVDKPAEKFVRRGRLDW---PEGATSRESIKAVLK 378
+ + R D E+ + RL W PE + + +++VL+
Sbjct: 226 ------GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 97 YKILRKIGEGTFG---QVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELL 148
+++LR +G+G +G QV TG+ A+KV++ R A T E ++LE +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K V + F + ++ E L G L+ L + F D ++
Sbjct: 79 KH-----PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEIS 131
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +H +I+ DLKPENI+ ++K+ D+ + S D
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD----------------- 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
G+ + T Y APE+++ G + D WS+G ++ ++ +G F T EN
Sbjct: 175 -GTVTH------XFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 97 YKILRKIGEGTFG---QVLDCLDRETGETVAIKVVRSIKKYREAAMT-----EIDVLELL 148
+++LR +G+G +G QV TG+ A+KV++ R A T E ++LE +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
K V + F + ++ E L G L+ L + F D ++
Sbjct: 79 KH-----PFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEIS 131
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ +H +I+ DLKPENI+ ++K+ D+ + S D
Sbjct: 132 MALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHD----------------- 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
G+ + T Y APE+++ G + D WS+G ++ ++ +G F T EN
Sbjct: 175 -GTVTHT------FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGEN 225
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ ++ M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
K+L+ IG+G FG V+ L G VA+K +++ +A + E V+ L+ S
Sbjct: 15 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 66
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
VQ+ + + + IV E M SL D+LR D + + + E + ++
Sbjct: 67 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 126
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+H DL N+L K+ D+ +T + + + K LP
Sbjct: 127 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 170
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE + +S D+WS G +L E+ S
Sbjct: 171 -----------WTAPEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 90/243 (37%), Gaps = 53/243 (21%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKR------ 150
+K + IG G FGQV R G+T V+R +K E A E+ L L
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTY---VIRRVKYNNEKAEREVKALAKLDHVNIVHY 70
Query: 151 --------YDRSGSRCVQIRNWFDYRNHI--------CIVFEML---GPSLYDFLRKNNY 191
YD S + +D N C+ +M +L ++ K
Sbjct: 71 NGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG 130
Query: 192 RPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDV 251
L E+ Q+ + V ++H +LIH DLKP NI V + +KI D+ + D
Sbjct: 131 EKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND- 189
Query: 252 NYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 311
KR ++ Y +PE I + D++++G IL
Sbjct: 190 --GKRTRSKGTLR----------------------YMSPEQISSQDYGKEVDLYALGLIL 225
Query: 312 IEL 314
EL
Sbjct: 226 AEL 228
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
++ + ++G G G V + +G +A K++ IK R + E+ VL ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
V F I I E M G SL L+K P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ +++H D+KP NIL S +K+ D+ V+ + +ID S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
++ + ++G G G V + +G +A K++ IK R + E+ VL ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
V F I I E M G SL L+K P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ +++H D+KP NIL S +K+ D+ V+ + +ID S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
++ + ++G G G V + +G +A K++ IK R + E+ VL ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
V F I I E M G SL L+K P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ +++H D+KP NIL S +K+ D+ V+ + +ID S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
K+GEG FG V T TVA+K + AAM +I EL +++D+ ++
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 158 C-----VQIRNWFDYRNHICIVFE-MLGPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
C V++ + + +C+V+ M SL D L + P + +I + +
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
F+H+ IH D+K NIL KI D+ + S F
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + IV T Y APE + G + D++S G +L+E+ +G
Sbjct: 189 TVMXSR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 95/227 (41%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
K+GEG FG V T TVA+K + AAM +I EL +++D+ ++
Sbjct: 37 NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 158 C-----VQIRNWFDYRNHICIVFE-MLGPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
C V++ + + +C+V+ M SL D L + P + +I + +
Sbjct: 87 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
F+H+ IH D+K NIL KI D+ + S F
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEK------------------FAQ 188
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
T + IV T Y APE + G + D++S G +L+E+ +G
Sbjct: 189 TVMXXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 18 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 70
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 71 LYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVH 130
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 131 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 173
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 174 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
K+L+ IG+G FG V+ L G VA+K +++ +A + E V+ L+ S
Sbjct: 24 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 75
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
VQ+ + + + IV E M SL D+LR D + + + E + ++
Sbjct: 76 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 135
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+H DL N+L K+ D+ +T + + + K LP
Sbjct: 136 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 179
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE + +S D+WS G +L E+ S
Sbjct: 180 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 19/155 (12%)
Query: 88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLEL 147
A+ T+ + L KIG G FG V C+ R G AIK RS KK ++ E + L
Sbjct: 2 AMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALRE 58
Query: 148 LKRYDRSG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------D 197
+ + G S V+ + + +H+ I E G SL D + + NYR D
Sbjct: 59 VYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKD 117
Query: 198 LVREIGRQLLECVAFMHDLRLIHTDLKPENILFVS 232
L+ ++GR L ++H + L+H D+KP NI F+S
Sbjct: 118 LLLQVGRGL----RYIHSMSLVHMDIKPSNI-FIS 147
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 22 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 74
Query: 161 IRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
+ I IV E + SL DFL+ + + + ++ Q+ +A++ + +
Sbjct: 75 LYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
H DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 134 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 177
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 178 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 125/329 (37%), Gaps = 81/329 (24%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++I R +G+G FG V ++++ VA+KV+ + +E ++ E+ +
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLR-REIEIQAHLHHP 83
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
+++ N+F R I ++ E P LY L+K+ F I +L + + + H
Sbjct: 84 NILRLYNYFYDRRRIYLILEY-APRGELYKELQKSCT--FDEQRTATIMEELADALMYCH 140
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
++IH D+KPEN+L LKI D+ + +P+ L + + +D
Sbjct: 141 GKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPS-------LRRKTMCGTLD------- 186
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMME 334
Y PE+I G + D+W +G + EL G F++ + E
Sbjct: 187 ------------YLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE------ 228
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVDHSA 394
T R +K LK P Q
Sbjct: 229 ---------------------------------TYRRIVKVDLKFPASVPTGAQ------ 249
Query: 395 GYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
DL+ LLR++PS RL HP+
Sbjct: 250 ----DLISKLLRHNPSERLPLAQVSAHPW 274
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
++ + ++G G G V + +G +A K++ IK R + E+ VL ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
V F I I E M G SL L+K P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ +++H D+KP NIL S +K+ D+ V+ + +ID S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVR-SIK-KYREAAMTEIDVLELLKRYDRS 154
++ + ++G G G V + +G +A K++ IK R + E+ VL ++ +
Sbjct: 8 FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVL-----HECN 62
Query: 155 GSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
V F I I E M G SL L+K P ++ ++ +++ + ++
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYL 120
Query: 214 HDL-RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ +++H D+KP NIL S +K+ D+ V+ + +ID S A
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQ------------------LID--SMA 160
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
N V TR Y +PE + G +S D+WS+G L+E+ G
Sbjct: 161 ------NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 192 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRH-----EKLVQ 244
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 245 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 304
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + R D Y R IK
Sbjct: 305 RDLRAANILVGENLVCKVADFGL-GRLIEDNEYTARQGAKFPIK---------------- 347
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 348 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 397
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 126/338 (37%), Gaps = 91/338 (26%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRY--DRS 154
++I R +G+G FG V ++ + +A+KV+ +A + + V L+R +S
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLF------KAQLEKAGVEHQLRREVEIQS 63
Query: 155 GSRCVQIRNWFDY-----RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLEC 209
R I + Y R ++ + + LG ++Y L+K + F +L
Sbjct: 64 HLRHPNILRLYGYFHDSTRVYLILEYAPLG-TVYRELQKLS--KFDEQRTATYITELANA 120
Query: 210 VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFG 269
+++ H ++IH D+KPEN+L S LKI D+ + +P+
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS------------------- 161
Query: 270 STAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEH 329
+ T Y PE+I G D+WS+G + E G+ F+ + +
Sbjct: 162 -------RRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
Query: 330 LAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQH 389
+ RV P + EGA
Sbjct: 215 YKRISRVEFTFPDFVT-------------------EGAR--------------------- 234
Query: 390 VDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTRD 427
DL+ LL+++PS R + L+HP+ T +
Sbjct: 235 ---------DLISRLLKHNPSQRPMLREVLEHPWITAN 263
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
+ I IV E M SL DFL+ + + + ++ Q+ +A++ + +
Sbjct: 78 LYAVVS-EEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
H DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 180
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 98/241 (40%), Gaps = 39/241 (16%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKR 150
+ + L +G+G+FG+V+ + T E A+K+++ + E M E VL L +
Sbjct: 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 79
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLL 207
Q+ + F + + V E + G +Y + ++ P V EI L
Sbjct: 80 ----PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 135
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
F+ +I+ DLK +N++ S ++KI D+ + + D
Sbjct: 136 ----FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD----------------- 174
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
G T T Y APE+I + D W+ G +L E+ +G+A F+ +
Sbjct: 175 -GVTT------KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 227
Query: 328 E 328
E
Sbjct: 228 E 228
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 138/352 (39%), Gaps = 88/352 (25%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDR- 153
Y+I+R + +G F +++ C + + A+K ++K R+ + D + + +YD
Sbjct: 33 YRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDF 90
Query: 154 ----------SGSRCVQIRNWFDYRNHICIVFE------MLGPSLYDFLRKNNYRPF-PV 196
C+ + + I++E +L Y F+ NY F P+
Sbjct: 91 KNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 197 DLVREIGRQLLECVAFMHDLRLI-HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK 255
+++ I + +L +++H+ + I H D+KP NIL
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL-------------------------- 184
Query: 256 RLPKSSAIKVIDFGSTAYEHQEHNYIVSTR---HYRAPEVILGLGWSY---PCDMWSVGC 309
+ K+ +K+ DFG + Y + I +R + PE SY D+WS+G
Sbjct: 185 -MDKNGRVKLSDFGESEYMVDKK--IKGSRGTYEFMPPEFFSNES-SYNGAKVDIWSLGI 240
Query: 310 ILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATS 369
L + F +L L R K ++ P + R +P T+
Sbjct: 241 CLYVMFYNVVPFSLKISLVELFNNIRT---------KNIEYPLD----RNHFLYP--LTN 285
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKH 421
++S N + + D ID L+ LR +P+ R+T+ DALKH
Sbjct: 286 KKST--------CSNNFLSNED------IDFLKLFLRKNPAERITSEDALKH 323
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 107/262 (40%), Gaps = 41/262 (15%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKR 150
+ + L +G+G+FG+V+ + T E A+K+++ + E M E VL L +
Sbjct: 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK 400
Query: 151 YDRSGSRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYR-PFPVDLVREIGRQLL 207
Q+ + F + + V E + G +Y + ++ P V EI L
Sbjct: 401 ----PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF 456
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
F+ +I+ DLK +N++ S ++KI D+ + + D
Sbjct: 457 ----FLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD----------------- 495
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENL 327
G T T Y APE+I + D W+ G +L E+ +G+A F+ +
Sbjct: 496 -GVTT------KXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED 548
Query: 328 EHL-AMMERVLGPIPQHMLKRV 348
E ++ME + P+ M K
Sbjct: 549 ELFQSIMEHNVA-YPKSMSKEA 569
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 97/237 (40%), Gaps = 34/237 (14%)
Query: 97 YKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++ L ++G G++G+V +E G A+K RS+ +R L + +++ G
Sbjct: 59 FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFR-GPKDRARKLAEVGSHEKVGQ 115
Query: 157 R--CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
CV++ ++ + + E+ GPSL P V R L +A +H
Sbjct: 116 HPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGAS-LPEAQVWGYLRDTLLALAHLH 174
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST-AY 273
L+H D+KP NI K+ D+ + +++ G+ A
Sbjct: 175 SQGLVHLDVKPANIFLGPRGRCKLGDFGL---------------------LVELGTAGAG 213
Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHL 330
E QE + Y APE++ G + D++S+G ++E+ L E + L
Sbjct: 214 EVQEGD-----PRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 37/221 (16%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
K+L+ IG+G FG V+ L G VA+K +++ +A + E V+ L+ S
Sbjct: 9 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 60
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
VQ+ + + + IV E M SL D+LR D + + + E + ++
Sbjct: 61 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 120
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+H DL N+L K+ D+ +T + + + K LP
Sbjct: 121 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK-LPVK--------------- 164
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE + +S D+WS G +L E+ S
Sbjct: 165 -----------WTAPEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 16 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 68
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 69 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 128
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 129 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 171
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 172 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 221
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ ++ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 41/223 (18%)
Query: 98 KILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSR 157
K+L+ IG+G FG V+ L G VA+K +++ +A + E V+ L+ S
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCIKN-DATAQAFLAEASVMTQLRH-----SN 247
Query: 158 CVQIRNWF-DYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
VQ+ + + + IV E M SL D+LR D + + + E + ++
Sbjct: 248 LVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEG 307
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVT--ARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
+H DL N+L K+ D+ +T A S D +LP
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTG---KLPVK------------- 351
Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE + +S D+WS G +L E+ S
Sbjct: 352 -------------WTAPEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 14 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 66
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 67 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 126
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 127 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 169
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 170 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 219
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
T+ + L KIG G FG V C+ R G AIK RS KK ++ E + L + +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 66
Query: 154 SG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------DLVREIG 203
G S V+ + + +H+ I E G SL D + + NYR DL+ ++G
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVG 125
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVS 232
R L ++H + L+H D+KP NI F+S
Sbjct: 126 RGL----RYIHSMSLVHMDIKPSNI-FIS 149
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 105/260 (40%), Gaps = 42/260 (16%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
L+ RY++ +G G +V D VA+KV+R+ ++ REA +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
+ ++ YD + Y IV E + G +L D + P E
Sbjct: 70 NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
+ + + F H +IH D+KP NI+ + +K+ D+ +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
A + D G++ + ++ T Y +PE G D++S+GC+L E+ +GE F
Sbjct: 163 ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
Query: 322 QTHENLEHLAMMERVLGPIP 341
T ++ + +A PIP
Sbjct: 220 -TGDSPDSVAYQHVREDPIP 238
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 42/232 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIK--KYREAAMTEIDVLELLKRYDR 153
+ +G G FG+V++ G+ VA+K+++S +EA M+E+ ++ L +++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLR--------KNNYRPFPVDLVREIGR 204
V + + + ++ E L +FLR K + RP + +
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ + +AF+ IH D+ N+L + KI D+ + D NY + +K
Sbjct: 168 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 227
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE I ++ D+WS G +L E+ S
Sbjct: 228 ----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL NIL K+ D+ + AR D Y R IK
Sbjct: 138 RDLAAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
T+ + L KIG G FG V C+ R G AIK RS KK ++ E + L + +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 64
Query: 154 SG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------DLVREIG 203
G S V+ + + +H+ I E G SL D + + NYR DL+ ++G
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVG 123
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVS 232
R L ++H + L+H D+KP NI F+S
Sbjct: 124 RGL----RYIHSMSLVHMDIKPSNI-FIS 147
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 19/149 (12%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR 153
T+ + L KIG G FG V C+ R G AIK RS KK ++ E + L + +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 62
Query: 154 SG--SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPV-------DLVREIG 203
G S V+ + + +H+ I E G SL D + + NYR DL+ ++G
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISE-NYRIMSYFKEAELKDLLLQVG 121
Query: 204 RQLLECVAFMHDLRLIHTDLKPENILFVS 232
R L ++H + L+H D+KP NI F+S
Sbjct: 122 RGL----RYIHSMSLVHMDIKPSNI-FIS 145
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 94/232 (40%), Gaps = 42/232 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
+ +G G FG+V++ G+ VA+K+++S +EA M+E+ ++ L +++
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLR--------KNNYRPFPVDLVREIGR 204
V + + + ++ E L +FLR K + RP + +
Sbjct: 104 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ + +AF+ IH D+ N+L + KI D+ + D NY + +K
Sbjct: 160 QVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK 219
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE I ++ D+WS G +L E+ S
Sbjct: 220 ----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
L+ RY++ +G G +V D VA+KV+R+ ++ REA +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
+ ++ YD + Y IV E + G +L D + P E
Sbjct: 70 NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
+ + + F H +IH D+KP NIL + +K+ D+ +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
A + D G++ + ++ T Y +PE G D++S+GC+L E+ +GE F
Sbjct: 163 ARAIADSGNSVXQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 79/185 (42%), Gaps = 32/185 (17%)
Query: 147 LLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGP--SLYDFLRKNNYRPFPVDLVREIGR 204
LLK+ S +++ +WF+ + ++ E P L+DF+ + +L R
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 164
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+LE V H+ ++H D+K ENIL D+N +K
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILI-------------------DLN-------RGELK 198
Query: 265 VIDFGSTA-YEHQEHNYIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILIELCSGEALFQ 322
+IDFGS A + + TR Y PE I + +WS+G +L ++ G+ F+
Sbjct: 199 LIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE 258
Query: 323 THENL 327
E +
Sbjct: 259 HDEEI 263
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 81 KDGHYLFALGENLTSRYKILRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYR 135
K GH+ GE + +LR++G+G+FG V D + E VA+K V R
Sbjct: 2 KKGHHHHHHGEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLR 61
Query: 136 EAA--MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-- 187
E + E V++ G C V++ +V E++ L +LR
Sbjct: 62 ERIEFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSL 113
Query: 188 -----KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
N RP P + + ++ ++ + +A+++ + +H DL N + +KI D+
Sbjct: 114 RPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDF 173
Query: 242 KVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYP 301
+T R + +YY++ K ++ R + APE + ++
Sbjct: 174 GMT-RDIYETDYYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTS 211
Query: 302 CDMWSVGCILIELCS 316
DMWS G +L E+ S
Sbjct: 212 SDMWSFGVVLWEITS 226
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 135/351 (38%), Gaps = 86/351 (24%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
+NL KIL G G+ G V+ G VA+K R + + + A+ EI +L
Sbjct: 32 KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
+++ Y C + + F Y I E+ +L D + N + L +E
Sbjct: 86 HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
+ RQ+ VA +H L++IH DLKP+NIL + + TA T + L
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 187
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILIEL 314
+ K +D G + +N T +RAPE++ + D++S+GC+ +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 315 CS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
S G+ F +K+ R + I
Sbjct: 247 LSKGKHPF------------------------------GDKYSRESNI-----------I 265
Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ + L ++ L H DL+ ++ +DP R TA L+HP F
Sbjct: 266 RGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 135/351 (38%), Gaps = 86/351 (24%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
+NL KIL G G+ G V+ G VA+K R + + + A+ EI +L
Sbjct: 32 KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
+++ Y C + + F Y I E+ +L D + N + L +E
Sbjct: 86 HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
+ RQ+ VA +H L++IH DLKP+NIL + + TA T + L
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 187
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILIEL 314
+ K +D G + +N T +RAPE++ + D++S+GC+ +
Sbjct: 188 SDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI 246
Query: 315 CS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESI 373
S G+ F +K+ R + I
Sbjct: 247 LSKGKHPF------------------------------GDKYSRESNI-----------I 265
Query: 374 KAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
+ + L ++ L H DL+ ++ +DP R TA L+HP F
Sbjct: 266 RGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+ ++G G +G V +G+ +A+K +R+ +E +D+ ++ D + V
Sbjct: 56 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT--V 113
Query: 160 QIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHD-L 216
+ I E++ SL F ++ + + P D++ +I +++ + +H L
Sbjct: 114 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 173
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
+IH D+KP N+L + +K+ D+ ++ Y S K ID G
Sbjct: 174 SVIHRDVKPSNVLINALGQVKMCDFGISG-------YL----VDSVAKTIDAG------- 215
Query: 277 EHNYIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILIELC 315
+ Y APE I G+S D+WS+G +IEL
Sbjct: 216 -------CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+ ++G G +G V +G+ +A+K +R+ +E +D+ ++ D + V
Sbjct: 12 IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFT--V 69
Query: 160 QIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHD-L 216
+ I E++ SL F ++ + + P D++ +I +++ + +H L
Sbjct: 70 TFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 129
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
+IH D+KP N+L + +K+ D+ ++ DV K ID G
Sbjct: 130 SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA-----------KDIDAG------- 171
Query: 277 EHNYIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILIELC 315
+ Y APE I G+S D+WS+G +IEL
Sbjct: 172 -------CKPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 207
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 127/332 (38%), Gaps = 65/332 (19%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSGSRCVQI 161
+GEG +V C++ T + A+K++ + R E+++L Y G R V
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML-----YQCQGHRNVLE 75
Query: 162 RNWFDYR-NHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
F + +VFE M G S+ + K R F + + + + F+H+ +
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 220 HTDLKPENILFVSPEY---LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
H DLKPENIL P +KI D+ + S IK ++ +
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDL----------------GSGIK-LNGDCSPISTP 176
Query: 277 EHNYIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
E + Y APEV+ + CD+WS+G IL L SG F +
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD-CG 235
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
P Q+ML + ++ G+ ++P+ + S A
Sbjct: 236 WDRGEACPACQNMLF-------ESIQEGKYEFPDKDWAHISCAAK--------------- 273
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
DL+ LL D RL+A L+HP+
Sbjct: 274 -------DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 127/332 (38%), Gaps = 65/332 (19%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKY-REAAMTEIDVLELLKRYDRSGSRCVQI 161
+GEG +V C++ T + A+K++ + R E+++L Y G R V
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEML-----YQCQGHRNVLE 75
Query: 162 RNWFDYR-NHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
F + +VFE M G S+ + K R F + + + + F+H+ +
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 220 HTDLKPENILFVSPEY---LKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
H DLKPENIL P +KI D+ + S IK ++ +
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGL----------------GSGIK-LNGDCSPISTP 176
Query: 277 EHNYIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILIELCSGEALFQTHENLEHLA 331
E + Y APEV+ + CD+WS+G IL L SG F +
Sbjct: 177 ELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSD-CG 235
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVLKLPRLQNLVMQHVD 391
P Q+ML + ++ G+ ++P+ + S A
Sbjct: 236 WDRGEACPACQNMLF-------ESIQEGKYEFPDKDWAHISCAAK--------------- 273
Query: 392 HSAGYLIDLLQGLLRYDPSSRLTAHDALKHPF 423
DL+ LL D RL+A L+HP+
Sbjct: 274 -------DLISKLLVRDAKQRLSAAQVLQHPW 298
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
R +G G FG+V C + TG+ A K + + + + AM E +L K + R
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
V + F+ + +C+V ++ G Y + P F Q++ +
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H +I+ DLKPEN+L ++I D + K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
+ APE++LG + + D +++G L E+ + F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 137/355 (38%), Gaps = 90/355 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
+NL KIL G G+ G V+ G VA+K R + + + A+ EI +L
Sbjct: 14 KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
+++ Y C + + F Y I E+ +L D + N + L +E
Sbjct: 68 HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
+ RQ+ VA +H L++IH DLKP+NIL + + TA T + L
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 169
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCI 310
+ K +D G +++ +N T +RAPE++ + D++S+GC+
Sbjct: 170 SDFGLCKKLDSGQSSFRTNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 311 LIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKP-AEKFVRRGRLDWPEGATS 369
++L + P +K+ R +
Sbjct: 229 FY------------------------------YILSKGKHPFGDKYSRESNI-------- 250
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
I+ + L ++ L H DL+ ++ +DP R TA L+HP F
Sbjct: 251 ---IRGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
+ I IV E + L DFL+ + + + ++ Q+ +A++ + +
Sbjct: 78 LYAVVS-EEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
H DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 137 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK--------------- 180
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
R +G G FG+V C + TG+ A K + + + + AM E +L K + R
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
V + F+ + +C+V ++ G Y + P F Q++ +
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H +I+ DLKPEN+L ++I D + K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
+ APE++LG + + D +++G L E+ + F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D +Y ++ +K + APE I ++ D+WS
Sbjct: 189 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
R +G G FG+V C + TG+ A K + + + + AM E +L K + R
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
V + F+ + +C+V ++ G Y + P F Q++ +
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H +I+ DLKPEN+L ++I D + K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
+ APE++LG + + D +++G L E+ + F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 22 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 74
Query: 161 IRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
+ I IV E + SL DFL+ + + + ++ Q+ +A++ + +
Sbjct: 75 LYAVVS-EEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
H DL+ NIL K+ D+ + AR D + R IK
Sbjct: 134 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEWTARQGAKFPIK--------------- 177
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 178 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 227
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 54/234 (23%)
Query: 98 KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVR--SIKKYREAAMTEIDVL-----E 146
K +R +GEG FG+V L C D TGE VA+K ++ + R EI++L E
Sbjct: 12 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 147 LLKRY----DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
+ +Y + G + VQ+ + + LG SL D+L ++ V L + +
Sbjct: 72 HIVKYKGCCEDQGEKSVQL----------VMEYVPLG-SLRDYLPRHC-----VGLAQLL 115
Query: 203 --GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
+Q+ E +A++H IH L N+L + +KI D+ + P YY
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY------ 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+V + G S + APE + + Y D+WS G L EL
Sbjct: 170 ---RVREDGD------------SPVFWYAPECLKECKFYYASDVWSFGVTLYEL 208
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D +Y ++ +K + APE I ++ D+WS
Sbjct: 189 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 54/234 (23%)
Query: 98 KILRKIGEGTFGQV-LDCLDRE---TGETVAIKVVR--SIKKYREAAMTEIDVL-----E 146
K +R +GEG FG+V L C D TGE VA+K ++ + R EI++L E
Sbjct: 11 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 147 LLKRY----DRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREI 202
+ +Y + G + VQ+ + + LG SL D+L ++ V L + +
Sbjct: 71 HIVKYKGCCEDQGEKSVQL----------VMEYVPLG-SLRDYLPRHC-----VGLAQLL 114
Query: 203 --GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
+Q+ E +A++H IH L N+L + +KI D+ + P YY
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY------ 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
+V + G S + APE + + Y D+WS G L EL
Sbjct: 169 ---RVREDGD------------SPVFWYAPECLKECKFYYASDVWSFGVTLYEL 207
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 46/264 (17%)
Query: 97 YKILRKIGEGTFGQVL---DCLDRETGETVAIKVVRSIK-----KYREAAMTEIDVLELL 148
+++L+ +G G +G+V +TG+ A+KV++ K E TE VLE
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE-- 113
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFL-RKNNYRPFPVDLVREIGRQL 206
+ R V + F + ++ + + G L+ L ++ + V + +G +
Sbjct: 114 --HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIY--VGEIV 169
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
L + +H L +I+ D+K ENIL S ++ + D+ ++ V
Sbjct: 170 L-ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF-----------------VA 211
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILIELCSGEALFQTH 324
D AY+ T Y AP+++ G G D WS+G ++ EL +G + F
Sbjct: 212 DETERAYD------FCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD 265
Query: 325 -ENLEHLAMMERVLG---PIPQHM 344
E + R+L P PQ M
Sbjct: 266 GEKNSQAEISRRILKSEPPYPQEM 289
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
S +++IG G FG V G + V +IK RE AM+E D +E + +
Sbjct: 7 SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 59
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
S + VQ+ + IC+VFE + L D+LR F + + + + E +A+
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 118
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ + +IH DL N L + +K+ D+ +T R D Y +K
Sbjct: 119 LEEASVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
+ +PEV +S D+WS G ++ E+ S G+ ++ N E
Sbjct: 170 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
L+ RY++ +G G +V D VA+KV+R+ ++ REA +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
+ ++ YD + Y IV E + G +L D + P E
Sbjct: 70 NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
+ + + F H +IH D+KP NI+ + +K+ D+ +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
A + D G++ + ++ T Y +PE G D++S+GC+L E+ +GE F
Sbjct: 163 ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98 KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++L K+G+G+FG V D +G+TV++ ++K + +++ + ++ R
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 71
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
V + D+RN I + +L P SL D LRK+ F + +
Sbjct: 72 --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E + ++ R IH DL N+L + + +KI D+ + P + ++Y
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--------- 179
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
QEH + + APE + +S+ D W G L E+
Sbjct: 180 ----------MQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 129/322 (40%), Gaps = 70/322 (21%)
Query: 67 GLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDCLDRETGE-TVAI 125
G A G W D KD LT L+++G G FG V + G+ VAI
Sbjct: 1 GTAGLGYGSWEIDPKD----------LT----FLKELGTGQFGVVK--YGKWRGQYDVAI 44
Query: 126 KVVRSIKKYREAAMTEIDVLELLK-RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLY 183
K+++ E +M+E + +E K + S + VQ+ + I I+ E M L
Sbjct: 45 KMIK------EGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLL 98
Query: 184 DFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKV 243
++LR+ +R F + E+ + + E + ++ + +H DL N L
Sbjct: 99 NYLREMRHR-FQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCL-------------- 143
Query: 244 TARSPTDVNYYKRLPKSSAIKVIDFGSTAYE-HQEHNYIVSTR---HYRAPEVILGLGWS 299
+ +KV DFG + Y E+ V ++ + PEV++ +S
Sbjct: 144 -------------VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 300 YPCDMWSVGCILIELCSGEAL----FQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKF 355
D+W+ G ++ E+ S + F E EH+A R+ P H+ +EK
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRP---HL------ASEKV 241
Query: 356 VRRGRLDWPEGATSRESIKAVL 377
W E A R + K +L
Sbjct: 242 YTIMYSCWHEKADERPTFKILL 263
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 96/227 (42%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
K+GEG FG V T TVA+K + AAM +I EL +++D+ ++
Sbjct: 31 NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 158 C-----VQIRNWFDYRNHICIVFE-MLGPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
C V++ + + +C+V+ M SL D L + P + +I + +
Sbjct: 81 CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
F+H+ IH D+K NIL KI D+ + R + A V+
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLA-----------RASEKFAQXVM---- 185
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
IV T Y APE + G + D++S G +L+E+ +G
Sbjct: 186 -------XXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ + M L DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 78 LYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D Y R IK
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEYTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 24/218 (11%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
++ +G G FG V + GE V I V + + + ++L+ GS V
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 160 QIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+ + +V +++ L D +R+N R DL+ Q+ + ++++ D+RL
Sbjct: 82 SRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWC-MQIAKGMSYLEDVRL 140
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
+H DL N+L SP ++KI D+ + +++D T Y H +
Sbjct: 141 VHRDLAARNVLVKSPNHVKITDFGLA-------------------RLLDIDETEY-HADG 180
Query: 279 NYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ + A E IL +++ D+WS G + EL +
Sbjct: 181 GKV--PIKWMALESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 100/246 (40%), Gaps = 37/246 (15%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR----EAAMTEIDVLELLKRYDRSG 155
R +G G FG+V C + TG+ A K + + + + AM E +L K + R
Sbjct: 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILA--KVHSRF- 246
Query: 156 SRCVQIRNWFDYRNHICIVFEML--GPSLYDFLRKNNYRP-FPVDLVREIGRQLLECVAF 212
V + F+ + +C+V ++ G Y + P F Q++ +
Sbjct: 247 --IVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEH 304
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H +I+ DLKPEN+L ++I D + K+ K + T
Sbjct: 305 LHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL-----------KAGQTKTKGYAGTP 353
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTH-ENLEHLA 331
+ APE++LG + + D +++G L E+ + F+ E +E+
Sbjct: 354 -------------GFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE 400
Query: 332 MMERVL 337
+ +RVL
Sbjct: 401 LKQRVL 406
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98 KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++L K+G+G+FG V D +G+TV++ ++K + +++ + ++ R
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
V + D+RN I + +L P SL D LRK+ F + +
Sbjct: 66 --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E + ++ R IH DL N+L + + +KI D+ + P + ++Y
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-------- 174
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
QEH + + APE + +S+ D W G L E+
Sbjct: 175 -----------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 96/236 (40%), Gaps = 32/236 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 77
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
+ ++ M SL DFL+ + + + ++ Q+ +A++ + +H
Sbjct: 78 LYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVH 137
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL+ NIL K+ D+ + AR D R IK
Sbjct: 138 RDLRAANILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIK---------------- 180
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 181 ------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 230
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 115/276 (41%), Gaps = 39/276 (14%)
Query: 98 KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K+++++G G FG+V + + T VA+K ++ +A + E ++++ L+
Sbjct: 16 KLVKRLGAGQFGEVWMGYYNNST--KVAVKTLKPGTMSVQAFLEEANLMKTLQH-----D 68
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ V++ I I+ E M SL DFL+ + + + + Q+ E +A++
Sbjct: 69 KLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
IH DL+ N+L KI D+ + AR D Y R IK
Sbjct: 129 KNYIHRDLRAANVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 176
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMME 334
+ APE I ++ D+WS G +L E+ + G+ + N + + +
Sbjct: 177 -----------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTALS 225
Query: 335 RVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSR 370
+ + + RV+ ++ ++ W E A R
Sbjct: 226 Q------GYRMPRVENCPDELYDIMKMCWKEKAEER 255
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 41/240 (17%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTEI 142
L+ RY++ +G G +V D VA+KV+R+ ++ REA +
Sbjct: 10 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL 69
Query: 143 DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVRE 201
+ ++ YD + Y IV E + G +L D + P E
Sbjct: 70 NHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAIE 120
Query: 202 IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSS 261
+ + + F H +IH D+KP NI+ + +K+ D+ +
Sbjct: 121 VIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI------------------ 162
Query: 262 AIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALF 321
A + D G++ + ++ T Y +PE G D++S+GC+L E+ +GE F
Sbjct: 163 ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKEAP 139
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 140 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 199
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D +Y ++ +K + APE I ++ D+WS
Sbjct: 200 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 237
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 238 FGVLLWEIFS 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 125 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 174
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 175 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 234
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D +Y ++ +K + APE I ++ D+WS
Sbjct: 235 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 272
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 273 FGVLLWEIFS 282
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98 KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++L K+G+G+FG V D +G+TV++ ++K + +++ + ++ R
Sbjct: 15 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 65
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
V + D+RN I + +L P SL D LRK+ F + +
Sbjct: 66 --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 122
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E + ++ R IH DL N+L + + +KI D+ + P + ++Y
Sbjct: 123 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYV--------- 173
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
QEH + + APE + +S+ D W G L E+
Sbjct: 174 ----------MQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 211
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98 KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++L K+G+G+FG V D +G+TV++ ++K + +++ + ++ R
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
V + D+RN I + +L P SL D LRK+ F + +
Sbjct: 62 --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E + ++ R IH DL N+L + + +KI D+ + P + ++Y
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-------- 170
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
QEH + + APE + +S+ D W G L E+
Sbjct: 171 -----------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 97/241 (40%), Gaps = 41/241 (17%)
Query: 92 NLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRS---------IKKYREAA-MTE 141
+L+ RY++ +G G +V D VA+KV+R+ ++ REA
Sbjct: 26 HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 85
Query: 142 IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVR 200
++ ++ YD + Y IV E + G +L D + P
Sbjct: 86 LNHPAIVAVYDTGEAETPA--GPLPY-----IVMEYVDGVTLRDIVHTEG--PMTPKRAI 136
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
E+ + + F H +IH D+KP NI+ + +K+ D+ +
Sbjct: 137 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI----------------- 179
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
A + D G++ + ++ T Y +PE G D++S+GC+L E+ +GE
Sbjct: 180 -ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
Query: 321 F 321
F
Sbjct: 236 F 236
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 46/230 (20%)
Query: 98 KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++L K+G+G+FG V D +G+TV++ ++K + +++ + ++ R
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
V + D+RN I + +L P SL D LRK+ F + +
Sbjct: 62 --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E + ++ R IH DL N+L + + +KI D+ + P + ++Y
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM-------- 170
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
QEH + + APE + +S+ D W G L E+
Sbjct: 171 -----------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 21/121 (17%)
Query: 201 EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
E+ + + F H +IH D+KP NI+ + +K+ D+ +
Sbjct: 120 EVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGI----------------- 162
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL 320
A + D G++ + ++ T Y +PE G D++S+GC+L E+ +GE
Sbjct: 163 -ARAIADSGNSVTQTAA---VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
Query: 321 F 321
F
Sbjct: 219 F 219
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 101/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 137
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D +Y ++ +K + APE I ++ D+WS
Sbjct: 198 IYKDPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 235
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 236 FGVLLWEIFS 245
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGET-VAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
K+G+G FG+V + G T VAIK ++ EA + E V++ L+ + VQ
Sbjct: 15 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRH-----EKLVQ 67
Query: 161 IRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
+ I IV E M SL DFL+ + + + ++ Q+ +A++ + +
Sbjct: 68 LYAVVS-EEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 220 HTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHN 279
H DL+ NIL K+ D+ + AR D R IK
Sbjct: 127 HRDLRAANILVGENLVCKVADFGL-ARLIEDNEXTARQGAKFPIK--------------- 170
Query: 280 YIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
+ APE L ++ D+WS G +L EL + G + N E L +ER
Sbjct: 171 -------WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 220
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 56/290 (19%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
L+++G G FG V + G+ VAIK+++ E +M+E + +E K + S
Sbjct: 28 FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 79
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ VQ+ + I I+ E M L ++LR+ +R F + E+ + + E + ++
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 138
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
+ +H DL N L VN +KV DFG + Y
Sbjct: 139 KQFLHRDLAARNCL---------------------VN------DQGVVKVSDFGLSRYVL 171
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
E+ V ++ + PEV++ +S D+W+ G ++ E+ S + F E
Sbjct: 172 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
EH+A R+ P H+ +EK W E A R + K +L
Sbjct: 232 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
S +++IG G FG V G + V +IK RE AM+E D +E + +
Sbjct: 10 SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 62
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
S + VQ+ + IC+VFE + L D+LR F + + + + E +A+
Sbjct: 63 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 121
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ + +IH DL N L + +K+ D+ +T R D Y +K
Sbjct: 122 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 172
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
+ +PEV +S D+WS G ++ E+ S G+ ++ N E
Sbjct: 173 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
S +++IG G FG V G + V +IK RE AM+E D +E + +
Sbjct: 7 SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 59
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
S + VQ+ + IC+VFE + L D+LR F + + + + E +A+
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 118
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ + +IH DL N L + +K+ D+ +T R D Y +K
Sbjct: 119 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 169
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
+ +PEV +S D+WS G ++ E+ S G+ ++ N E
Sbjct: 170 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 100/248 (40%), Gaps = 59/248 (23%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF-PVD 197
+V+ LL + G + I + + N S Y ++N + P+ P D
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKPED 139
Query: 198 LVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSP 248
L ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 140 LYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 249 TDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVG 308
D + ++ +K + APE I ++ D+WS G
Sbjct: 200 KDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFG 237
Query: 309 CILIELCS 316
+L E+ S
Sbjct: 238 VLLWEIFS 245
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 98 KILRKIGEGTFGQV-LDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
K+++K+G G FG+V + + T VA+K ++ +A + E ++++ L+
Sbjct: 15 KLVKKLGAGQFGEVWMGYYNNST--KVAVKTLKPGTMSVQAFLEEANLMKTLQH-----D 67
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP-SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ V++ I I+ E + SL DFL+ + + + + Q+ E +A++
Sbjct: 68 KLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
IH DL+ N+L KI D+ + AR D Y R IK
Sbjct: 128 KNYIHRDLRAANVLVSESLMCKIADFGL-ARVIEDNEYTAREGAKFPIK----------- 175
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE I ++ ++WS G +L E+ +
Sbjct: 176 -----------WTAPEAINFGCFTIKSNVWSFGILLYEIVT 205
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 110/258 (42%), Gaps = 45/258 (17%)
Query: 98 KILRKIGEGTFGQVLDC-LDRE---TGETVAIKVVR--SIKKYREAAMTEIDVLELL--K 149
K +R +GEG FG+V C D E TGE VA+K ++ S + EI++L L +
Sbjct: 12 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI--GRQL 206
+ C + D N I ++ E L SL ++L KN + ++L +++ Q+
Sbjct: 72 NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQI 123
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ + ++ + +H DL N+L S +KI D+ +T TD K
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD--------KEXXTVKD 175
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
D S + + APE ++ + D+WS G L EL L +
Sbjct: 176 DRDSPVF-------------WYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSD 217
Query: 327 LEHLAMMERVLGPIPQHM 344
+A+ +++GP M
Sbjct: 218 SSPMALFLKMIGPTHGQM 235
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 121/290 (41%), Gaps = 56/290 (19%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
L+++G G FG V + G+ VAIK+++ E +M+E + +E K + S
Sbjct: 8 FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 59
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ VQ+ + I I+ E M L ++LR+ +R F + E+ + + E + ++
Sbjct: 60 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 118
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
+ +H DL N L VN +KV DFG + Y
Sbjct: 119 KQFLHRDLAARNCL---------------------VN------DQGVVKVSDFGLSRYVL 151
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
E+ V ++ + PEV++ +S D+W+ G ++ E+ S + F E
Sbjct: 152 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 211
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
EH+A R+ P H+ +EK W E A R + K +L
Sbjct: 212 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 252
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 109/258 (42%), Gaps = 45/258 (17%)
Query: 98 KILRKIGEGTFGQVLDC-LDRE---TGETVAIKVVRSIKKYREAA--MTEIDVLELL--K 149
K +R +GEG FG+V C D E TGE VA+K ++ A EI++L L +
Sbjct: 24 KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREI--GRQL 206
+ C + D N I ++ E L SL ++L KN + ++L +++ Q+
Sbjct: 84 NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKNK---INLKQQLKYAVQI 135
Query: 207 LECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVI 266
+ + ++ + +H DL N+L S +KI D+ +T TD K
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETD--------KEXXTVKD 187
Query: 267 DFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN 326
D S + + APE ++ + D+WS G L EL L +
Sbjct: 188 DRDSPVF-------------WYAPECLMQSKFYIASDVWSFGVTLHEL-----LTYCDSD 229
Query: 327 LEHLAMMERVLGPIPQHM 344
+A+ +++GP M
Sbjct: 230 SSPMALFLKMIGPTHGQM 247
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
S +++IG G FG V G + V +IK RE AM+E D +E + +
Sbjct: 5 SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 57
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
S + VQ+ + IC+VFE + L D+LR F + + + + E +A+
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 116
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ + +IH DL N L + +K+ D+ +T R D Y +K
Sbjct: 117 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 167
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
+ +PEV +S D+WS G ++ E+ S G+ ++ N E
Sbjct: 168 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 447 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 503
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 504 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 542
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 543 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 588
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 56/290 (19%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
L+++G G FG V + G+ VAIK+++ E +M+E + +E K + S
Sbjct: 28 FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 79
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ VQ+ + I I+ E M L ++LR+ +R F + E+ + + E + ++
Sbjct: 80 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 138
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY-- 273
+ +H DL N L VN +KV DFG + Y
Sbjct: 139 KQFLHRDLAARNCL---------------------VN------DQGVVKVSDFGLSRYVL 171
Query: 274 EHQEHNYIVST--RHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
+ +E + + S + PEV++ +S D+W+ G ++ E+ S + F E
Sbjct: 172 DDEETSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 231
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
EH+A R+ P H+ +EK W E A R + K +L
Sbjct: 232 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 272
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
L+++G G FG V + G+ VAIK+++ E +M+E + +E K + S
Sbjct: 13 FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 64
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ VQ+ + I I+ E M L ++LR+ +R F + E+ + + E + ++
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 123
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
+ +H DL N L + +KV DFG + Y
Sbjct: 124 KQFLHRDLAARNCL---------------------------VNDQGVVKVSDFGLSRYVL 156
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
E+ V ++ + PEV++ +S D+W+ G ++ E+ S + F E
Sbjct: 157 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 216
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
EH+A R+ P H+ +EK W E A R + K +L
Sbjct: 217 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 46/230 (20%)
Query: 98 KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++L K+G+G+FG V D +G+TV++ ++K + +++ + ++ R
Sbjct: 21 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 71
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
V + D+RN I + +L P SL D LRK+ F + +
Sbjct: 72 --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 128
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E + ++ R IH DL N+L + + +KI D+ + + LP++
Sbjct: 129 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL----------MRALPQNDDHX 178
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
V+ QEH + + APE + +S+ D W G L E+
Sbjct: 179 VM---------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 217
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 135/355 (38%), Gaps = 90/355 (25%)
Query: 91 ENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVL----- 145
+NL KIL G G+ G V+ G VA+K R + + + A+ EI +L
Sbjct: 14 KNLVVSEKIL---GYGSSGTVV-FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESDD 67
Query: 146 --ELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVRE-- 201
+++ Y C + + F Y I E+ +L D + N + L +E
Sbjct: 68 HPNVIRYY------CSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
+ RQ+ VA +H L++IH DLKP+NIL + + TA T + L
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSS-------RFTADQQTGAENLRILI 169
Query: 259 KSSAI-KVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCI 310
+ K +D G + +N T +RAPE++ + D++S+GC+
Sbjct: 170 SDFGLCKKLDSGQXXFRXNLNN-PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 311 LIELCS-GEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATS 369
+ S G+ F +K+ R +
Sbjct: 229 FYYILSKGKHPF------------------------------GDKYSRESNI-------- 250
Query: 370 RESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFF 424
I+ + L ++ L H DL+ ++ +DP R TA L+HP F
Sbjct: 251 ---IRGIFSLDEMKCL---HDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 446 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 502
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 503 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 541
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 542 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 587
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 105/238 (44%), Gaps = 37/238 (15%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
+IG G+FG V + G+ VA+K+++ + E + + +L++ +R V I
Sbjct: 43 RIGSGSFGTVYK--GKWHGD-VAVKILKVVDPTPEQFQAFRNEVAVLRK-----TRHVNI 94
Query: 162 RNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRL 218
+ Y ++++ IV + G SLY L + F + + +I RQ + + ++H +
Sbjct: 95 LLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETK-FQMFQLIDIARQTAQGMDYLHAKNI 153
Query: 219 IHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEH 278
IH D+K NI +KI D+ + + +K GS E
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGL-----------------ATVKSRWSGSQQVEQPTG 196
Query: 279 NYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D++S G +L EL +GE + N + + M
Sbjct: 197 SVL-----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 56/290 (19%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
L+++G G FG V + G+ VAIK+++ E +M+E + +E K + S
Sbjct: 12 FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 63
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ VQ+ + I I+ E M L ++LR+ +R F + E+ + + E + ++
Sbjct: 64 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 122
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE- 274
+ +H DL N L + +KV DFG + Y
Sbjct: 123 KQFLHRDLAARNCL---------------------------VNDQGVVKVSDFGLSRYVL 155
Query: 275 HQEHNYIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENL 327
E+ V ++ + PEV++ +S D+W+ G ++ E+ S + F E
Sbjct: 156 DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA 215
Query: 328 EHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
EH+A R+ P H+ +EK W E A R + K +L
Sbjct: 216 EHIAQGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 256
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 69
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 70 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 117
Query: 208 -------ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
E + ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 118 NWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 163
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 164 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 211
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVITEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D + ++ +K + APE I ++ D+WS
Sbjct: 189 IXKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 90/220 (40%), Gaps = 30/220 (13%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIK-VVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
+G+G FGQ + RETGE + +K ++R ++ + + E+ V+ RC++
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVM-----------RCLEH 66
Query: 162 RNWFDY------RNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
N + + + E + + K+ +P + + +A++H
Sbjct: 67 PNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+ +IH DL N L + + + D+ + RL + S
Sbjct: 127 MNIIHRDLNSHNCLVRENKNVVVADFGLA-----------RLMVDEKTQPEGLRSLKKPD 175
Query: 276 QEHNY-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
++ Y +V ++ APE+I G + D++S G +L E+
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 46/230 (20%)
Query: 98 KILRKIGEGTFGQVLDC-LDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGS 156
++L K+G+G+FG V D +G+TV++ ++K + +++ + ++ R
Sbjct: 11 RLLEKLGDGSFGVVRRGEWDAPSGKTVSV----AVKCLKPDVLSQPEAMDDFIRE----- 61
Query: 157 RCVQIRNWFDYRNHICIVFEMLGP------------SLYDFLRKNNYRPFPVDLVREIGR 204
V + D+RN I + +L P SL D LRK+ F + +
Sbjct: 62 --VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQGH-FLLGTLSRYAV 118
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIK 264
Q+ E + ++ R IH DL N+L + + +KI D+ + + LP++
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGL----------MRALPQNDDHX 168
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL 314
V+ QEH + + APE + +S+ D W G L E+
Sbjct: 169 VM---------QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEM 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K + V
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
R + +I I F G +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 81 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 136
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
DL N L +K+ D+ ++ RL G T H +
Sbjct: 137 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKFP 176
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
+ + APE + +S D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 177 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 233
Query: 335 RVLG 338
R G
Sbjct: 234 RPEG 237
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 102/252 (40%), Gaps = 51/252 (20%)
Query: 86 LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
+F E SR KI LR++G+G+FG V D + E VA+K V RE
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
+ E V++ G C V++ +V E++ L +LR
Sbjct: 66 EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
N RP P + + ++ ++ + +A+++ + +H DL N + +KI D+ +T
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
D TAY + ++ R + APE + ++ DM
Sbjct: 178 R---------------------DIYETAYYRKGGKGLLPVR-WMAPESLKDGVFTTSSDM 215
Query: 305 WSVGCILIELCS 316
WS G +L E+ S
Sbjct: 216 WSFGVVLWEITS 227
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 105/252 (41%), Gaps = 51/252 (20%)
Query: 86 LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
+F E SR KI LR++G+G+FG V D + E VA+K V RE
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
+ E V++ G C V++ +V E++ L +LR
Sbjct: 66 EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
N RP P + + ++ ++ + +A+++ + +H DL N + +KI D+ +T
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
R + +YY++ K ++ R + APE + ++ DM
Sbjct: 178 -RDIYETDYYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDM 215
Query: 305 WSVGCILIELCS 316
WS G +L E+ S
Sbjct: 216 WSFGVVLWEITS 227
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K + V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
R + +I I F G +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 80 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
DL N L +K+ D+ ++ RL G T H +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKFP 175
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
+ + APE + +S D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 176 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 335 RVLG 338
R G
Sbjct: 233 RPEG 236
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K + V
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
R + +I I F G +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 80 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 135
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
DL N L +K+ D+ ++ RL G T H +
Sbjct: 136 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKFP 175
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
+ + APE + +S D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 176 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 232
Query: 335 RVLG 338
R G
Sbjct: 233 RPEG 236
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 82 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 138
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 139 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 177
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 178 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 223
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 101/244 (41%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K + V
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
R + +I I F G +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 85 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHR 140
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
DL N L +K+ D+ ++ RL G T H +
Sbjct: 141 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKFP 180
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
+ + APE + +S D+W+ G +L E+ + G L Q +E LE ME
Sbjct: 181 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRME 237
Query: 335 RVLG 338
R G
Sbjct: 238 RPEG 241
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 76 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 78
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 79 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 126
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 127 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 172
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 173 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 220
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 19 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 79 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 128
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 129 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 188
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D + ++ +K + APE I ++ D+WS
Sbjct: 189 IXKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 226
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 227 FGVLLWEIFS 236
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 84 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 140
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 141 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHG--KWPVKWYAP 179
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 180 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 225
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 88 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 144
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 145 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 183
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 73 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGXLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 76 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 82
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 83 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 130
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 131 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 176
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 177 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 224
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 102 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 158
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 159 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 197
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 198 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 243
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 94 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 150
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 151 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 189
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 190 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 235
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 97
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 98 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 145
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 146 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 191
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 192 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 239
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 76 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 75 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 169 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 59/247 (23%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R + + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
+V+ LL + G + I + + N S Y ++N + P+ DL
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYK-DL 136
Query: 199 VREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 137 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYK 196
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
D +Y ++ +K + APE I ++ D+WS G
Sbjct: 197 DPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGV 234
Query: 310 ILIELCS 316
+L E+ S
Sbjct: 235 LLWEIFS 241
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 80 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 173
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 174 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 73 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
ER G
Sbjct: 237 ERPEG 241
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 104 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 161 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 199
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 104 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 160
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D NYYK Q H + AP
Sbjct: 161 VTQHYAKISDFGLSKALRADENYYKA-------------------QTHGKW--PVKWYAP 199
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 200 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 245
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
ER G
Sbjct: 237 ERPEG 241
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 73
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 74 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGXLLDYVREHKDNIGSQYLL 121
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 122 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 167
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 168 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 137
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D + ++ +K + APE I ++ D+WS
Sbjct: 198 IXKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 235
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 236 FGVLLWEIFS 245
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 75
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 76 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 123
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 124 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 169
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 170 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 217
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 18 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 69
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + F + + +I RQ + ++H
Sbjct: 70 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKS 128
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 171
Query: 278 HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 172 GSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 281
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 341
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
+L N L +K+ D+ + + G T H +
Sbjct: 342 RNLAARNCLVGENHLVKVADF--------------------GLSRLMTGDTYTAHAGAKF 381
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 382 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 438
Query: 334 ERVLG 338
ER G
Sbjct: 439 ERPEG 443
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 119/286 (41%), Gaps = 48/286 (16%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLK-RYDRSGS 156
L+++G G FG V + G+ VAIK+++ E +M+E + +E K + S
Sbjct: 13 FLKELGTGQFGVVK--YGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMNLSHE 64
Query: 157 RCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ VQ+ + I I+ E M L ++LR+ +R F + E+ + + E + ++
Sbjct: 65 KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHR-FQTQQLLEMCKDVCEAMEYLES 123
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+ +H DL N L +K+ D+ ++ R D Y + S V
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLS-RYVLDDEYTS--SRGSKFPV---------- 170
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEAL----FQTHENLEHLA 331
+ PEV++ +S D+W+ G ++ E+ S + F E EH+A
Sbjct: 171 ----------RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 332 MMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIKAVL 377
R+ P H+ +EK W E A R + K +L
Sbjct: 221 QGLRLYRP---HL------ASEKVYTIMYSCWHEKADERPTFKILL 257
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 73 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 75 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 169 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 76
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 77 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 124
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 125 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 170
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 171 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 218
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 73 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 101/241 (41%), Gaps = 46/241 (19%)
Query: 98 KILRKIGEGTFGQVLDC----LDRETGETVAIKVVR-SIKKYREAAMTEIDVLELLKRYD 152
K + ++G+G FG V C L TG VA+K ++ S + EI +L+ L
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDF 69
Query: 153 RSGSRCVQIRNWFDYRNHICIVFEMLGPS--LYDFLRKNNYRPFPVDLVREI--GRQLLE 208
R V ++ R + +V E L PS L DFL+++ R +D R + Q+ +
Sbjct: 70 IVKYRGV---SYGPGRPELRLVMEYL-PSGCLRDFLQRHRAR---LDASRLLLYSSQICK 122
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN-YYKRLPKSSAIKVID 267
+ ++ R +H DL NIL S ++KI D+ + P D + R P S I
Sbjct: 123 GMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPI---- 178
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIEL-------CSGEAL 320
+ APE + +S D+WS G +L EL CS A
Sbjct: 179 ------------------FWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE 220
Query: 321 F 321
F
Sbjct: 221 F 221
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 66
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 67 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 114
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 115 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 160
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 161 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
ER G
Sbjct: 232 ERPEG 236
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 320
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
+L N L +K+ D+ + + G T H +
Sbjct: 381 RNLAARNCLVGENHLVKVADF--------------------GLSRLMTGDTYTAHAGAKF 420
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 421 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 477
Query: 334 ERVLG 338
ER G
Sbjct: 478 ERPEG 482
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 96/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 73
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 74 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 121
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 122 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 167
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 168 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 215
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 34/237 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
S +++IG G FG V G + V +IK +E +M+E D +E + +
Sbjct: 27 SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIKEGSMSEDDFIEEAEVMMKL 79
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
S + VQ+ + IC+VFE + L D+LR F + + + + E +A+
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 138
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ + +IH DL N L + +K+ D+ +T R D Y +K
Sbjct: 139 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 189
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
+ +PEV +S D+WS G ++ E+ S G+ ++ N E
Sbjct: 190 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
ER G
Sbjct: 232 ERPEG 236
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 78
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 178
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 179 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 235
Query: 334 ERVLG 338
ER G
Sbjct: 236 ERPEG 240
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 43/227 (18%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS---GSR 157
K GEG FG V T TVA+K + AAM +I EL +++D+ ++
Sbjct: 28 NKXGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVXAK 77
Query: 158 C-----VQIRNWFDYRNHICIVFEML-GPSLYDFLR-KNNYRPFPVDLVREIGRQLLECV 210
C V++ + + +C+V+ SL D L + P +I + +
Sbjct: 78 CQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGI 137
Query: 211 AFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGS 270
F+H+ IH D+K NIL KI D+ + S + + + S
Sbjct: 138 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---KFAQXVXXSR--------- 185
Query: 271 TAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSG 317
IV T Y APE + G + D++S G +L+E+ +G
Sbjct: 186 ----------IVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEIITG 221
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
ER G
Sbjct: 237 ERPEG 241
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 278
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 279 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
+L N L +K+ D+ + + G T H +
Sbjct: 339 RNLAARNCLVGENHLVKVADF--------------------GLSRLMTGDTYTAHAGAKF 378
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 379 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 435
Query: 334 ERVLG 338
ER G
Sbjct: 436 ERPEG 440
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 79
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 180 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 236
Query: 334 ERVLG 338
ER G
Sbjct: 237 ERPEG 241
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 76
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 176
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 177 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 334 ERVLG 338
ER G
Sbjct: 234 ERPEG 238
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 75 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG------------------ 164
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 165 ---RAKLLGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 76
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 176
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 177 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 334 ERVLG 338
ER G
Sbjct: 234 ERPEG 238
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 61/250 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---P 195
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKVAP 137
Query: 196 VDLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 138 EDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARD 197
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
D + ++ +K + APE I ++ D+WS
Sbjct: 198 IYKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWS 235
Query: 307 VGCILIELCS 316
G +L E+ S
Sbjct: 236 FGVLLWEIFS 245
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 80 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
CV ++ D RL+H DL N+L +P+++KI D+
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 168
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 28/161 (17%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 73 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
CV ++ D RL+H DL N+L +P+++KI D+
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 161
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 87
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 88 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 187
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 188 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 244
Query: 334 ERVLG 338
ER G
Sbjct: 245 ERPEG 249
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 59/247 (23%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R + + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 28 RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDL 198
+V+ LL + G + I + + N S Y ++N + P+ DL
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYK-DL 136
Query: 199 VREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 137 YKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYK 196
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
D +Y ++ +K + APE I ++ D+WS G
Sbjct: 197 DPDYVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSFGV 234
Query: 310 ILIELCS 316
+L E+ S
Sbjct: 235 LLWEIFS 241
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/251 (23%), Positives = 105/251 (41%), Gaps = 38/251 (15%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGET---VAIKVVRS--IKKYREAAMTEIDVLELLK 149
S KI + IG G FG+V + G+ VAIK ++S +K R ++E ++
Sbjct: 33 SCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM---G 89
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++D + + + I+ E M SL FLR+N+ + + LV + R +
Sbjct: 90 QFDHP--NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGML-RGIAA 146
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT---ARSPTDVNYYKRLPKSSAIKV 265
+ ++ D+ +H DL NIL S K+ D+ ++ +D Y L I+
Sbjct: 147 GMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIR- 205
Query: 266 IDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTH 324
+ APE I ++ D+WS G ++ E+ S GE +
Sbjct: 206 ---------------------WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 244
Query: 325 ENLEHLAMMER 335
N + + +E+
Sbjct: 245 TNQDVINAIEQ 255
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
ER G
Sbjct: 232 ERPEG 236
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 81
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + F + + +I RQ + ++H
Sbjct: 82 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKS 140
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + T+ + + GS +E
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 183
Query: 278 HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 184 GSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 97/236 (41%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 75 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ R+
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF---GRAKL----------- 168
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 169 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 216
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G FG+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 72
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKF 172
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G Q +E LE M
Sbjct: 173 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 334 ERVLG 338
ER G
Sbjct: 230 ERPEG 234
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 99/249 (39%), Gaps = 60/249 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTEI------ 142
R + + +G G FGQV++ +D+ T TVA+K+++ + E A M+E+
Sbjct: 29 RLNLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 88
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF--PV 196
+V+ LL + G + I + + N S Y ++N + P+ P
Sbjct: 89 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKTPE 138
Query: 197 DLVREI---------GRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARS 247
DL ++ Q+ + + F+ + IH DL NIL +KI D+ +
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 248 PTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSV 307
D + ++ +K + APE I ++ D+WS
Sbjct: 199 XKDPDXVRKGDARLPLK----------------------WMAPETIFDRVYTIQSDVWSF 236
Query: 308 GCILIELCS 316
G +L E+ S
Sbjct: 237 GVLLWEIFS 245
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 74
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 174
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 175 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 231
Query: 334 ERVLG 338
ER G
Sbjct: 232 ERPEG 236
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 74
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 75 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 122
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
CV ++ D RL+H DL N+L +P+++KI D+
Sbjct: 123 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 163
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 30 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 81
Query: 161 IRNWFDYRN--HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + IV + G SLY L + + F + + +I RQ + ++H
Sbjct: 82 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETK-FEMKKLIDIARQTARGMDYLHAKS 140
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + T+ + + GS +E
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 183
Query: 278 HNYIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 184 GSIL-----WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 51/244 (20%)
Query: 94 TSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYRE--AAMTEIDV 144
SR KI LR++G+G+FG V D + E VA+K V RE + E V
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 74
Query: 145 LELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-------KNNYRP 193
++ G C V++ +V E++ L +LR N RP
Sbjct: 75 MK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 126
Query: 194 FP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
P + + ++ ++ + +A+++ + +H +L N + +KI D+ +T R + +
Sbjct: 127 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT-RDIYETD 185
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YY++ K ++ R + APE + ++ DMWS G +L
Sbjct: 186 YYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLW 224
Query: 313 ELCS 316
E+ S
Sbjct: 225 EITS 228
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 28/161 (17%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 76
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 77 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 124
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDY 241
CV ++ D RL+H DL N+L +P+++KI D+
Sbjct: 125 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDF 165
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 51/244 (20%)
Query: 94 TSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYRE--AAMTEIDV 144
SR KI LR++G+G+FG V D + E VA+K V RE + E V
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 145 LELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-------KNNYRP 193
++ G C V++ +V E++ L +LR N RP
Sbjct: 74 MK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 194 FP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
P + + ++ ++ + +A+++ + +H +L N + +KI D+ +T R + +
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT-RDIYETD 184
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YY++ K ++ R + APE + ++ DMWS G +L
Sbjct: 185 YYRKGGKG--------------------LLPVR-WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 313 ELCS 316
E+ S
Sbjct: 224 EITS 227
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 72/360 (20%), Positives = 134/360 (37%), Gaps = 102/360 (28%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDV---------- 144
++Y + +IG+G++G V + A+KV+ K R+A
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 145 --------------LELLKRYDRSGSRCVQIRNWFDYRN--HICIVFEML--GPSLYDFL 186
+ +LK+ D V++ D N H+ +VFE++ GP +
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHP--NVVKLVEVLDDPNEDHLYMVFELVNQGP----VM 126
Query: 187 RKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTAR 246
+P D R + L++ + ++H ++IH D+KP N+L ++KI D+ V+
Sbjct: 127 EVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVS-- 184
Query: 247 SPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWS 306
N +K S A+ G+ A+ E + TR + + + D+W+
Sbjct: 185 -----NEFK---GSDALLSNTVGTPAFMAPES--LSETRKIFSGKAL---------DVWA 225
Query: 307 VGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEG 366
+G L G+ F M ER++ ++ L++P+
Sbjct: 226 MGVTLYCFVFGQCPF----------MDERIMC-------------LHSKIKSQALEFPDQ 262
Query: 367 ATSRESIKAVLKLPRLQNLVMQHVDHSAGYLIDLLQGLLRYDPSSRLTAHDALKHPFFTR 426
E +K DL+ +L +P SR+ + HP+ TR
Sbjct: 263 PDIAEDLK------------------------DLITRMLDKNPESRIVVPEIKLHPWVTR 298
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 34/244 (13%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K + V
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 162 RNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHT 221
R + +I I F G +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 78 R---EPPFYIIIEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHR 133
Query: 222 DLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYI 281
DL N L +K+ D+ ++ RL G T H +
Sbjct: 134 DLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTXTAHAGAKFP 173
Query: 282 VSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMME 334
+ + APE + +S D+W+ G +L E+ + G Q +E LE ME
Sbjct: 174 IK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRME 230
Query: 335 RVLG 338
R G
Sbjct: 231 RPEG 234
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 98/237 (41%), Gaps = 34/237 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDR- 153
S +++IG G FG V G + V +IK RE AM+E D +E + +
Sbjct: 8 SELTFVQEIGSGQFGLV------HLGYWLNKDKV-AIKTIREGAMSEEDFIEEAEVMMKL 60
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
S + VQ+ + IC+V E + L D+LR F + + + + E +A+
Sbjct: 61 SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAY 119
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ + +IH DL N L + +K+ D+ +T R D Y +K
Sbjct: 120 LEEACVIHRDLAARNCLVGENQVIKVSDFGMT-RFVLDDQYTSSTGTKFPVK-------- 170
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
+ +PEV +S D+WS G ++ E+ S G+ ++ N E
Sbjct: 171 --------------WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 75
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ R T Y IK
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK---------------- 178
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 179 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 232
Query: 334 ERVLG 338
ER G
Sbjct: 233 ERPEG 237
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 76
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ R T Y IK
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKFPIK---------------- 179
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ APE + +S D+W+ G +L E+ + G L Q +E LE M
Sbjct: 180 ------WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM 233
Query: 334 ERVLG 338
ER G
Sbjct: 234 ERPEG 238
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
+ +G G FG+V++ G+ VA+K+++S +EA M+E+ ++ L +++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGR-------- 204
V + + + ++ E L +FLR+ + R D I
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTASTRDL 166
Query: 205 -----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
Q+ + +AF+ IH D+ N+L + KI D+ + D NY +
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+K + APE I ++ D+WS G +L E+ S
Sbjct: 227 RLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 93/237 (39%), Gaps = 48/237 (20%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
+ +G G FG+V++ G+ VA+K+++S +EA M+E+ ++ L +++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNNYRPFPVDLVREIGR-------- 204
V + + + ++ E L +FLR+ + R D I
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS-RVLETDPAFAIANSTLSTRDL 166
Query: 205 -----QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPK 259
Q+ + +AF+ IH D+ N+L + KI D+ + D NY +
Sbjct: 167 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNA 226
Query: 260 SSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+K + APE I ++ D+WS G +L E+ S
Sbjct: 227 RLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 93
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 152
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 195
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 196 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 92
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 93 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 151
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 194
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 195 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 248
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ +G G FG V L GE V I V +I + REA + + L + Y +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPV--AIMELREATSPKANKEILDEAYVMA 106
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLLE 208
H+C + + S + PF +D VRE IG Q L
Sbjct: 107 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 154
Query: 209 --CVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 155 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 200
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 201 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 248
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ + G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 72
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 73 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 120
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 121 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 166
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 167 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 214
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 94/236 (39%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ + G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + PF +D VRE IG Q L
Sbjct: 80 SVD----------NPHVCRLLGICLTSTVQLI--TQLMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 173
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 174 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 70
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 129
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 172
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 173 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 70
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 71 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 129
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 172
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 173 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 27/166 (16%)
Query: 173 IVFEM--LGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILF 230
+V EM LGP L +L++N R + E+ Q+ + ++ + +H DL N+L
Sbjct: 88 LVMEMAELGP-LNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLL 144
Query: 231 VSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAP 290
V+ Y KI D+ ++ D N YK Q H + AP
Sbjct: 145 VTQHYAKISDFGLSKALRADENXYKA-------------------QTHGKW--PVKWYAP 183
Query: 291 EVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAMMER 335
E I +S D+WS G ++ E S G+ ++ + E AM+E+
Sbjct: 184 ECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEK 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 67
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 68 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 126
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 169
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 170 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 223
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 95/236 (40%), Gaps = 50/236 (21%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+ +K ++ + G FG V L GE V I V +IK+ REA + + L + Y +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPV--AIKELREATSPKANKEILDEAYVMA 79
Query: 155 GSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFP--VDLVRE----IGRQLL- 207
H+C + + S + + PF +D VRE IG Q L
Sbjct: 80 SVD----------NPHVCRLLGICLTSTVQLIMQ--LMPFGCLLDYVREHKDNIGSQYLL 127
Query: 208 -ECVA------FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKS 260
CV ++ D RL+H DL N+L +P+++KI D+ +
Sbjct: 128 NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL-------------- 173
Query: 261 SAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
G+ E+ V + + A E IL +++ D+WS G + EL +
Sbjct: 174 -------LGAEEKEYHAEGGKVPIK-WMALESILHRIYTHQSDVWSYGVTVWELMT 221
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
S KI + IG G FG+V + G+ VAIK +++ K R ++E ++
Sbjct: 28 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM--- 84
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
++D + + + I+ E M SL FLRKN+ R + LV + R +
Sbjct: 85 GQFDHP--NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIG 141
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++ D+ +H DL NIL S + KV D
Sbjct: 142 SGMKYLSDMSAVHRDLAARNILVNS---------------------------NLVCKVSD 174
Query: 268 FGSTAYEHQEHNYIVSTR------HYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL 320
FG + + +TR + APE I ++ D+WS G ++ E+ S GE
Sbjct: 175 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
Query: 321 FQTHENLEHLAMME 334
+ N + + +E
Sbjct: 235 YWDMSNQDVIKAIE 248
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 51/252 (20%)
Query: 86 LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
+F E SR KI LR++G+G+FG V D + E VA+K V RE
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
+ E V++ G C V++ +V E++ L +LR
Sbjct: 63 EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 114
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
N RP P + + ++ ++ + +A+++ + +H DL N + +KI D+ +T
Sbjct: 115 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 174
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
D T + ++ R + APE + ++ DM
Sbjct: 175 R---------------------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDM 212
Query: 305 WSVGCILIELCS 316
WS G +L E+ S
Sbjct: 213 WSFGVVLWEITS 224
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 100/252 (39%), Gaps = 51/252 (20%)
Query: 86 LFALGENLTSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA 138
+F E SR KI LR++G+G+FG V D + E VA+K V RE
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 139 --MTEIDVLELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR----- 187
+ E V++ G C V++ +V E++ L +LR
Sbjct: 66 EFLNEASVMK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPE 117
Query: 188 --KNNYRPFP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
N RP P + + ++ ++ + +A+++ + +H DL N + +KI D+ +T
Sbjct: 118 AENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT 177
Query: 245 ARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDM 304
D T + ++ R + APE + ++ DM
Sbjct: 178 R---------------------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDM 215
Query: 305 WSVGCILIELCS 316
WS G +L E+ S
Sbjct: 216 WSFGVVLWEITS 227
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 65
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 124
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 167
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 168 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
++H DLKP N+ + +K+ D+ + D ++ K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTF-------------------- 176
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
V T +Y +PE + + ++ D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 93
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 94 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 152
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + T+ + + GS +E
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 195
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 196 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 249
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
++H DLKP N+ + +K+ D+ + D ++ K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAF-------------------- 176
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
V T +Y +PE + + ++ D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 65
Query: 161 IRNWFDYRN--HICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 66 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 124
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + + +K GS +E
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGL-----------------ATVKSRWSGSHQFEQLS 167
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 168 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 34/248 (13%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
S KI + IG G FG+V + G+ VAIK +++ K R ++E ++
Sbjct: 7 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM--- 63
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
++D + + + I+ E M SL FLRKN+ R + LV + R +
Sbjct: 64 GQFDHP--NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIG 120
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++ D+ +H DL NIL S K+ D+ ++ D P++
Sbjct: 121 SGMKYLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD-------PEA------- 166
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN 326
AY + + + APE I ++ D+WS G ++ E+ S GE + N
Sbjct: 167 ----AYTTRGGKIPI---RWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 219
Query: 327 LEHLAMME 334
+ + +E
Sbjct: 220 QDVIKAIE 227
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 30/236 (12%)
Query: 93 LTSRYKILRKIGEGTFGQVLDCLDRET--GETVAIKVVRSIKKYREAAMTEIDVLELLKR 150
L +Y + +GEG++G+V + LD ET V I + +++ ++LL+R
Sbjct: 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 151 YDRSGSRCVQIRN--WFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
+Q+ + + + + + +V E + + L + FPV QL++
Sbjct: 63 LRHK--NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLID 120
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++H ++H D+KP N+L + LKI V + A+
Sbjct: 121 GLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV----------------AEALHPFAA 164
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGW--SYPCDMWSVGCILIELCSGEALFQ 322
T Q + ++ PE+ GL + D+WS G L + +G F+
Sbjct: 165 DDTCRTSQ------GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 397 LIDLLQGLLRYDPSSRLTAHDALKHPFFTRDY 428
L DLL+G+L Y+P+ R + +H +F + +
Sbjct: 240 LSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 95/238 (39%), Gaps = 48/238 (20%)
Query: 101 RKIGEGTFGQVLDCLDRETGE-----TVAIKVVRSIKKY--REAAMTEIDVLELLKRYDR 153
+ +G G FG+V++ G+ VA+K+++S +EA M+E+ ++ L +++
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 154 SGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKN-------NYRPF--PVDLVRE-- 201
V + + + ++ E L +FLR+ +Y P P + +
Sbjct: 112 ----IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 202 ---IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLP 258
Q+ + +AF+ IH D+ N+L + KI D+ + D NY +
Sbjct: 168 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGN 227
Query: 259 KSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+K + APE I ++ D+WS G +L E+ S
Sbjct: 228 ARLPVK----------------------WMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 88/200 (44%), Gaps = 32/200 (16%)
Query: 95 SRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRS 154
+++ + +KIG G FG + E A VV+ +Y+E + LK Y R
Sbjct: 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKV--EYQENG----PLFSELKFYQRV 90
Query: 155 GSR-CVQI---RNWFDY----------------RNHICIVFEMLGPSLYDFLRKNNYRPF 194
+ C++ R DY R++ +V E LG L +N F
Sbjct: 91 AKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TF 148
Query: 195 PVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL--FVSPEYLKIPDYKVTARSPTDVN 252
V ++G ++L+ + ++H+ +H D+K N+L + +P+ + + DY ++ R + N
Sbjct: 149 KKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGN 208
Query: 253 Y--YKRLPKSSAIKVIDFGS 270
+ Y+ P+ I+F S
Sbjct: 209 HKQYQENPRKGHNGTIEFTS 228
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 24/99 (24%)
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
++H DLKP N+ + +K+ D+ + D ++ K
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF-------------------- 176
Query: 278 HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
V T +Y +PE + + ++ D+WS+GC+L ELC+
Sbjct: 177 ----VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 98/245 (40%), Gaps = 36/245 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 72
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
I+ E M +L D+LR+ N + ++ + Q+ + ++ IH
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIH 132
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLS-----------RLMT---------GDTFTAHAGAKF 172
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G Q +E LE M
Sbjct: 173 PIK---WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRM 229
Query: 334 ERVLG 338
ER G
Sbjct: 230 ERPEG 234
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 102/254 (40%), Gaps = 46/254 (18%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
S KI + IG G FG+V + G+ VAIK +++ K R ++E ++
Sbjct: 13 ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIM--- 69
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
++D + + + I+ E M SL FLRKN+ R + LV + R +
Sbjct: 70 GQFDHP--NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGML-RGIG 126
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++ D+ +H DL NIL S + KV D
Sbjct: 127 SGMKYLSDMSYVHRDLAARNILVNS---------------------------NLVCKVSD 159
Query: 268 FGSTAYEHQEHNYIVSTR------HYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEAL 320
FG + + +TR + APE I ++ D+WS G ++ E+ S GE
Sbjct: 160 FGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
Query: 321 FQTHENLEHLAMME 334
+ N + + +E
Sbjct: 220 YWDMSNQDVIKAIE 233
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
++G G FG V + R + + + ++ +K+ E A TE E++ R Q+
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTE----EMM----REAQIMHQL 67
Query: 162 RNWFDYR-------NHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
N + R + +V EM G L+ FL PV V E+ Q+ + ++
Sbjct: 68 DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYL 126
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
+ +H DL N+L V+ Y KI D+ ++ D +YY SA K
Sbjct: 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT---ARSAGK--------- 174
Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM 332
+ APE I +S D+WS G + E S G+ ++ + E +A
Sbjct: 175 ---------WPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 225
Query: 333 MER 335
+E+
Sbjct: 226 IEQ 228
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 26/219 (11%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCV 159
+ ++G G +G V +G+ A+K +R+ +E D+ + D + V
Sbjct: 39 IXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCPFT--V 96
Query: 160 QIRNWFDYRNHICIVFEMLGPSLYDFLRK--NNYRPFPVDLVREIGRQLLECVAFMHD-L 216
+ I E+ SL F ++ + + P D++ +I +++ + +H L
Sbjct: 97 TFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL 156
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQ 276
+IH D+KP N+L + +K D+ ++ DV K ID G Y
Sbjct: 157 SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA-----------KDIDAGCKPYXAP 205
Query: 277 EHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
E R + G+S D+WS+G IEL
Sbjct: 206 E----------RINPELNQKGYSVKSDIWSLGITXIELA 234
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 85
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 86 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 144
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + T+ + + GS +E
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 187
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 188 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 241
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 99/249 (39%), Gaps = 36/249 (14%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
K+G G +G+V + ++ TVA+K ++ E + E V++ +K VQ+
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH-----PNLVQL 93
Query: 162 RNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIH 220
IV E M +L D+LR+ N ++ + Q+ + ++ IH
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIH 153
Query: 221 TDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNY 280
DL N L +K+ D+ ++ RL G T H +
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLS-----------RLMT---------GDTYTAHAGAKF 193
Query: 281 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-------GEALFQTHENLEHLAMM 333
+ + APE + +S D+W+ G +L E+ + G L Q ++ LE M
Sbjct: 194 PIK---WTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRM 250
Query: 334 ERVLGPIPQ 342
E+ G P+
Sbjct: 251 EQPEGCPPK 259
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 51/244 (20%)
Query: 94 TSRYKI--LRKIGEGTFGQVL-----DCLDRETGETVAIKVVRSIKKYREAA--MTEIDV 144
SR KI LR++G+G+FG V D + E VA+K V RE + E V
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASV 73
Query: 145 LELLKRYDRSGSRC---VQIRNWFDYRNHICIVFEMLG-PSLYDFLR-------KNNYRP 193
++ G C V++ +V E++ L +LR N RP
Sbjct: 74 MK--------GFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 194 FP-VDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
P + + ++ ++ + +A+++ + +H DL N + +KI D+ +T
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR------- 178
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
D T + ++ R + APE + ++ DMWS G +L
Sbjct: 179 --------------DIXETDXXRKGGKGLLPVR-WMAPESLKDGVFTTSSDMWSFGVVLW 223
Query: 313 ELCS 316
E+ S
Sbjct: 224 EITS 227
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVAYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 37/239 (15%)
Query: 101 RKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQ 160
++IG G+FG V + V + +A E+ VL +R V
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLR--------KTRHVN 65
Query: 161 IRNWFDY--RNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
I + Y + + IV + G SLY L + + L+ +I RQ + + ++H
Sbjct: 66 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLI-DIARQTAQGMDYLHAKS 124
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
+IH DLK NI +KI D+ + T+ + + GS +E
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLA----TEKSRWS-------------GSHQFEQLS 167
Query: 278 HNYIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMM 333
+ + + APEVI +S+ D+++ G +L EL +G+ + N + + M
Sbjct: 168 GSIL-----WMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFM 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95 SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
+R + +G G FG+V++ + + TVA+K+++ REA M+E+ VL
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
L + V + ++ E L +FLR+ + P +
Sbjct: 83 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Q+ + +AF+ IH DL NIL KI D+ + D
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 198
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
NY + +K + APE I +++ D+WS G
Sbjct: 199 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 236
Query: 311 LIELCS 316
L EL S
Sbjct: 237 LWELFS 242
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95 SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
+R + +G G FG+V++ + + TVA+K+++ REA M+E+ VL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
L + V + ++ E L +FLR+ + P +
Sbjct: 106 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Q+ + +AF+ IH DL NIL KI D+ + D
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND 221
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
NY + +K + APE I +++ D+WS G
Sbjct: 222 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 259
Query: 311 LIELCS 316
L EL S
Sbjct: 260 LWELFS 265
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95 SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
+R + +G G FG+V++ + + TVA+K+++ REA M+E+ VL
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
L + V + ++ E L +FLR+ + P +
Sbjct: 99 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 154
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Q+ + +AF+ IH DL NIL KI D+ + D
Sbjct: 155 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 214
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
NY + +K + APE I +++ D+WS G
Sbjct: 215 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 252
Query: 311 LIELCS 316
L EL S
Sbjct: 253 LWELFS 258
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95 SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
+R + +G G FG+V++ + + TVA+K+++ REA M+E+ VL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
L + V + ++ E L +FLR+ + P +
Sbjct: 106 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 161
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Q+ + +AF+ IH DL NIL KI D+ + D
Sbjct: 162 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 221
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
NY + +K + APE I +++ D+WS G
Sbjct: 222 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 259
Query: 311 LIELCS 316
L EL S
Sbjct: 260 LWELFS 265
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 89/246 (36%), Gaps = 50/246 (20%)
Query: 95 SRYKILRKIGEGTFGQVLDC-----LDRETGETVAIKVVRSIKKY--REAAMTEIDVLEL 147
+R + +G G FG+V++ + + TVA+K+++ REA M+E+ VL
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 148 LKRYDRSGSRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRKNN-----YRPFPVDLVR- 200
L + V + ++ E L +FLR+ + P +
Sbjct: 101 LGNH----MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 156
Query: 201 ----------EIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD 250
Q+ + +AF+ IH DL NIL KI D+ + D
Sbjct: 157 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND 216
Query: 251 VNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 310
NY + +K + APE I +++ D+WS G
Sbjct: 217 SNYVVKGNARLPVK----------------------WMAPESIFNCVYTFESDVWSYGIF 254
Query: 311 LIELCS 316
L EL S
Sbjct: 255 LWELFS 260
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R F +DL I QL +A
Sbjct: 451 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKFSLDLASLILYAYQLSTALA 505
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 506 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 557
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 558 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Query: 331 AMME 334
+E
Sbjct: 603 GRIE 606
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 28/173 (16%)
Query: 193 PFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
P V +VR+IG L A H D+KPENIL + ++ + D+ + A + TD
Sbjct: 134 PRAVAIVRQIGSALDAAHAAGA----THRDVKPENILVSADDFAYLVDFGI-ASATTDE- 187
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
K+ G+T V T +Y APE +Y D++++ C+L
Sbjct: 188 -----------KLTQLGNT----------VGTLYYXAPERFSESHATYRADIYALTCVLY 226
Query: 313 ELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPE 365
E +G +Q + A + + + P P + + + + RG PE
Sbjct: 227 ECLTGSPPYQGDQLSVXGAHINQAI-PRPSTVRPGIPVAFDAVIARGXAKNPE 278
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIITLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 100/243 (41%), Gaps = 40/243 (16%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSGSRCVQI 161
++G G FG V + R + + + ++ +K+ E A TE E++ R Q+
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDV-AIKVLKQGTEKADTE----EMM----REAQIMHQL 393
Query: 162 RNWFDYR-------NHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVAFM 213
N + R + +V EM G L+ FL PV V E+ Q+ + ++
Sbjct: 394 DNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYL 452
Query: 214 HDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAY 273
+ +H +L N+L V+ Y KI D+ ++ D +YY SA K
Sbjct: 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT---ARSAGKW-------- 501
Query: 274 EHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLEHLAM 332
+ APE I +S D+WS G + E S G+ ++ + E +A
Sbjct: 502 ----------PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF 551
Query: 333 MER 335
+E+
Sbjct: 552 IEQ 554
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVGYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/247 (21%), Positives = 107/247 (43%), Gaps = 68/247 (27%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYK-----RLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSV 307
YYK RLP + APE + +++ D+WS
Sbjct: 212 YYKNTTNGRLPVK--------------------------WMAPEALFDRVYTHQSDVWSF 245
Query: 308 GCILIEL 314
G ++ E+
Sbjct: 246 GVLMWEI 252
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 104/242 (42%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSG---SRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIIHLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 450
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R F +DL I QL +A
Sbjct: 451 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKFSLDLASLILYAYQLSTALA 505
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L + + +K+ D+ ++ R D YYK IK
Sbjct: 506 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 557
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 558 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 602
Query: 331 AMME 334
+E
Sbjct: 603 GRIE 606
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 28 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 87
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 88 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 139
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 140 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGL-ARDINNID 198
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 199 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 237
Query: 313 EL 314
E+
Sbjct: 238 EI 239
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 38/163 (23%)
Query: 158 CVQIRNWFDYRNHIC-----IVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
VQI N+ ++ + IV E +G L+++ + PV ++L +++
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVG---GQSLKRSKGQKLPVAEAIAYLLEILPALSY 197
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+H + L++ DLKPENI+ + +K+ID G+ +
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQ----------------------------LKLIDLGAVS 229
Query: 273 YEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELC 315
Y+ T ++APE++ G + D+++VG L L
Sbjct: 230 -RINSFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 30 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 89
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 90 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 141
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 142 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 200
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 201 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 239
Query: 313 EL 314
E+
Sbjct: 240 EI 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 33 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 92
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 93 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 144
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 145 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 203
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 204 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 242
Query: 313 EL 314
E+
Sbjct: 243 EI 244
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 108/242 (44%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 87 KPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 146
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 147 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 198
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 257
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + + V + APE + +++ D+WS G ++
Sbjct: 258 YYKKT-TNGRLPV--------------------KWMAPEALFDRVYTHQSDVWSFGVLMW 296
Query: 313 EL 314
E+
Sbjct: 297 EI 298
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 34/248 (13%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
S KI R IG G FG+V + G+ VAIK ++ +K R + E ++
Sbjct: 42 ASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIM--- 98
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYD-FLRKNNYRPFPVDLVREIGRQLL 207
++D V + + IV E + D FLRK++ + + LV + R +
Sbjct: 99 GQFDHP--NVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGML-RGIA 155
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++ D+ +H DL NIL S K+ D+ ++ +VI+
Sbjct: 156 AGMRYLADMGYVHRDLAARNILVNSNLVCKVSDFGLS-------------------RVIE 196
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN 326
A I + APE I ++ D+WS G ++ E+ S GE + N
Sbjct: 197 DDPEAVYTTTGGKI--PVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN 254
Query: 327 LEHLAMME 334
+ + +E
Sbjct: 255 QDVIKAIE 262
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 47/241 (19%)
Query: 87 FALGENLT----SRYKILRKIGEGTFGQVLDCLDRETGETV---AIKVVRSIKKYREAAM 139
FA+GE +T +K+ IG+G FG + D + E+V A VV+
Sbjct: 23 FAVGEIITDMAKKEWKVGLPIGQGGFGCIY-LADMNSSESVGSDAPCVVKVEPSDNGPLF 81
Query: 140 TEIDVLELLKRYDRSGSRCVQIRNWFDYR---------------------NHICIVFEML 178
TE LK Y R+ ++ QI+ W R ++ ++ +
Sbjct: 82 TE------LKFYQRA-AKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF 134
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL--FVSPEYL 236
G L N R F V ++ ++L+ + ++H+ +H D+K N+L + +P+ +
Sbjct: 135 GSDLQKIYEANAKR-FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV 193
Query: 237 KIPDYKVTAR-SPTDVNY-YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL 294
+ DY + R P V+ YK PK I+F S HN + +R R IL
Sbjct: 194 YLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSI----DAHNGVAPSR--RGDLEIL 247
Query: 295 G 295
G
Sbjct: 248 G 248
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R F +DL I QL +A
Sbjct: 71 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKFSLDLASLILYAYQLSTALA 125
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L + + +K+ D+ ++ R D YYK IK
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 177
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 178 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 331 AMME 334
+E
Sbjct: 223 GRIE 226
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 99/234 (42%), Gaps = 36/234 (15%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE-TVAIKVVRSIKKYREAAMTEIDVLELLKRYDR-SGS 156
+L+++G G FG V L + G+ VA+K+++ E +M+E + + + + S
Sbjct: 12 LLKELGSGQFGVVK--LGKWKGQYDVAVKMIK------EGSMSEDEFFQEAQTMMKLSHP 63
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPS-LYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHD 215
+ V+ I IV E + L ++LR + P L+ E+ + E +AF+
Sbjct: 64 KLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLL-EMCYDVCEGMAFLES 122
Query: 216 LRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
+ IH DL N L +K+ D+ +T R D Y + +K
Sbjct: 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMT-RYVLDDQYVSSVGTKFPVK----------- 170
Query: 276 QEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHENLE 328
+ APEV +S D+W+ G ++ E+ S G+ + + N E
Sbjct: 171 -----------WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE 213
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 105/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L ++I D+ + AR +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 100/241 (41%), Gaps = 47/241 (19%)
Query: 87 FALGENLT----SRYKILRKIGEGTFGQVLDCLDRETGETV---AIKVVRSIKKYREAAM 139
FA+GE +T +K+ IG+G FG + D + E+V A VV+
Sbjct: 23 FAVGEIITDMAKKEWKVGLPIGQGGFGCIY-LADMNSSESVGSDAPCVVKVEPSDNGPLF 81
Query: 140 TEIDVLELLKRYDRSGSRCVQIRNWFDYR---------------------NHICIVFEML 178
TE LK Y R+ ++ QI+ W R ++ ++ +
Sbjct: 82 TE------LKFYQRA-AKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF 134
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL--FVSPEYL 236
G L N R F V ++ ++L+ + ++H+ +H D+K N+L + +P+ +
Sbjct: 135 GSDLQKIYEANAKR-FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV 193
Query: 237 KIPDYKVTAR-SPTDVNY-YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL 294
+ DY + R P V+ YK PK I+F S HN + +R R IL
Sbjct: 194 YLVDYGLAYRYCPEGVHKEYKEDPKRCHDGTIEFTSI----DAHNGVAPSR--RGDLEIL 247
Query: 295 G 295
G
Sbjct: 248 G 248
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/242 (19%), Positives = 104/242 (42%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + + ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR +++
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-ARDINNID 211
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK+ + APE + +++ D+WS G ++
Sbjct: 212 YYKKTTNGRL---------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 75
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R + +DL I QL +A
Sbjct: 76 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKYSLDLASLILYAYQLSTALA 130
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 182
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 183 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 227
Query: 331 AMME 334
+E
Sbjct: 228 GRIE 231
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 99/249 (39%), Gaps = 46/249 (18%)
Query: 99 ILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELLKRYDR 153
I R IG G FG+V + G+ VAIK ++ +K R + E ++ ++D
Sbjct: 26 IERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIM---GQFDH 82
Query: 154 SGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAF 212
+ + + IV E M SL FL+KN+ + + LV + R + + +
Sbjct: 83 P--NIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGML-RGISAGMKY 139
Query: 213 MHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTA 272
+ D+ +H DL NIL S + KV DFG +
Sbjct: 140 LSDMGYVHRDLAARNILINS---------------------------NLVCKVSDFGLSR 172
Query: 273 YEHQEHNYIVSTR------HYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHE 325
+ +TR + APE I ++ D+WS G ++ E+ S GE +
Sbjct: 173 VLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMT 232
Query: 326 NLEHLAMME 334
N + + +E
Sbjct: 233 NQDVIKAVE 241
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 81/220 (36%), Gaps = 45/220 (20%)
Query: 88 ALGENLTSRYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKK---YREAAMTEI-- 142
A+G + + IG+G FG+V + GE VA+K+ S ++ +REA + +
Sbjct: 2 AMGSTIARTIVLQESIGKGRFGEVWR--GKWRGEEVAVKIFSSREERSWFREAEIYQTVM 59
Query: 143 ----DVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRK-----NNYRP 193
++L + ++ Q+ DY H SL+D+L +
Sbjct: 60 LRHENILGFIAADNKDNGTWTQLWLVSDYHEH---------GSLFDYLNRYTVTVEGMIK 110
Query: 194 FPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNY 253
+ + +E V + H DLK +NIL I D + R
Sbjct: 111 LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR------- 163
Query: 254 YKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVI 293
SA ID N+ V T+ Y APEV+
Sbjct: 164 -----HDSATDTIDIAP--------NHRVGTKRYMAPEVL 190
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGFVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 98
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R + +DL I QL +A
Sbjct: 99 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKYSLDLASLILYAYQLSTALA 153
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 154 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 205
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 206 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
Query: 331 AMME 334
+E
Sbjct: 251 GRIE 254
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 14 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 73
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R + +DL I QL +A
Sbjct: 74 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKYSLDLASLILYAYQLSTALA 128
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 129 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 180
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 181 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 225
Query: 331 AMME 334
+E
Sbjct: 226 GRIE 229
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 72
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R + +DL I QL +A
Sbjct: 73 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKYSLDLASLILYAYQLSTALA 127
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 128 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 179
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 180 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 224
Query: 331 AMME 334
+E
Sbjct: 225 GRIE 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 108/268 (40%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ + AR D + I + +
Sbjct: 179 LINSNLVCKVSDFGL-ARVLEDDPEAAYTTRGGKIPI--------------------RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R + +DL I QL +A
Sbjct: 71 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKYSLDLASLILYAYQLSTALA 125
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 177
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 178 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 331 AMME 334
+E
Sbjct: 223 GRIE 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 67
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R + +DL I QL +A
Sbjct: 68 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKYSLDLASLILYAYQLSTALA 122
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 174
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 175 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 219
Query: 331 AMME 334
+E
Sbjct: 220 GRIE 223
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 118/307 (38%), Gaps = 39/307 (12%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRSGSRCVQ 160
+G+G V ++TG+ AIKV +I R + M E +VL+ L ++ +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH--KNIVKLFA 74
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
I R+ + I+ SLY L + +N P + R ++ + + + ++
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 220 HTDLKPENILFVSPE----YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
H ++KP NI+ V E K+ D+ AR D + L +G+ Y H
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFG-AARELEDDEQFVXL----------YGTEEYLH 183
Query: 276 QE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN-LEHLAM 332
+ ++ H + + D+WS+G +G F+ E + +
Sbjct: 184 PDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK---AVLKLPRLQNLVMQH 389
M +++ P + V K G +DW S+ VL P L N++
Sbjct: 236 MYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEAD 290
Query: 390 VDHSAGY 396
+ G+
Sbjct: 291 QEKCWGF 297
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 33/244 (13%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R + +DL I QL +A
Sbjct: 71 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKYSLDLASLILYAYQLSTALA 125
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGST 271
++ R +H D+ N+L S + +K+ D+ ++ R D YYK IK
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS-RYMEDSTYYKASKGKLPIK------- 177
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIE-LCSGEALFQTHENLEHL 330
+ APE I ++ D+W G + E L G FQ +N + +
Sbjct: 178 ---------------WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 222
Query: 331 AMME 334
+E
Sbjct: 223 GRIE 226
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGAVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTFVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 4 RLHFGNGHLKLPGLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 62
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 63 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 117
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 118 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 176
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 177 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 215
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 216 SPEAIAYRKFTSASDVWSYGIVLWEVMS 243
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTYVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/347 (20%), Positives = 134/347 (38%), Gaps = 46/347 (13%)
Query: 103 IGEGTFGQVLDCLDRETGETVAIKVVRSIKKYR--EAAMTEIDVLELLKRYDRSGSRCVQ 160
+G+G V ++TG+ AIKV +I R + M E +VL+ L ++ +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNH--KNIVKLFA 74
Query: 161 IRNWFDYRNHICIVFEMLGPSLYDFLRK-NNYRPFPVDLVREIGRQLLECVAFMHDLRLI 219
I R+ + I+ SLY L + +N P + R ++ + + + ++
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 220 HTDLKPENILFVSPE----YLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEH 275
H ++KP NI+ V E K+ D+ AR D + L +G+ Y H
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFG-AARELEDDEQFVSL----------YGTEEYLH 183
Query: 276 QE--HNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHEN-LEHLAM 332
+ ++ H + + D+WS+G +G F+ E + +
Sbjct: 184 PDMYERAVLRKDHQKK--------YGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEV 235
Query: 333 MERVLGPIPQHMLKRVDKPAEKFVRRGRLDWPEGATSRESIK---AVLKLPRLQNLVMQH 389
M +++ P + V K G +DW S+ VL P L N++
Sbjct: 236 MYKIITGKPSGAISGVQK-----AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEAD 290
Query: 390 VDHSAGY------LIDLLQGLLRYDPS-SRLTAHDALKHPFFTRDYY 429
+ G+ D+L ++ + S ++TAH H + T +
Sbjct: 291 QEKCWGFDQFFAETSDILHRMVIHVFSLQQMTAHKIYIHSYNTATIF 337
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 111/268 (41%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ ++ D P++ AY + + +
Sbjct: 179 LINSNLVCKVSDFGLSRVLEDD-------PEA-----------AYTTRGGKIPI---RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 93/244 (38%), Gaps = 51/244 (20%)
Query: 100 LRKIGEGTFGQVLDCLDRETG----ETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
+R IGEG FG+V R G E + V+ +K+ A M E +
Sbjct: 52 VRDIGEGAFGRVFQA--RAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDN 109
Query: 156 SRCVQIRNWFDYRNHICIVFEMLG-PSLYDFLRK--------------------NNYRPF 194
V++ +C++FE + L +FLR ++ P
Sbjct: 110 PNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPP 169
Query: 195 PVDLVRE--IGRQLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
P+ + I RQ+ +A++ + + +H DL N L +KI D+ ++ R+ +
Sbjct: 170 PLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLS-RNIYSAD 228
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
YYK + N + R + PE I ++ D+W+ G +L
Sbjct: 229 YYK--------------------ADGNDAIPIR-WMPPESIFYNRYTTESDVWAYGVVLW 267
Query: 313 ELCS 316
E+ S
Sbjct: 268 EIFS 271
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 100/241 (41%), Gaps = 47/241 (19%)
Query: 87 FALGENLT----SRYKILRKIGEGTFGQVLDCLDRETGETV---AIKVVRSIKKYREAAM 139
FA+GE +T + +K+ IG+G FG + D + E+V A VV+
Sbjct: 23 FAVGEIITDMAAAAWKVGLPIGQGGFGCIY-LADMNSSESVGSDAPCVVKVEPSDNGPLF 81
Query: 140 TEIDVLELLKRYDRSGSRCVQIRNWFDYR---------------------NHICIVFEML 178
TE LK Y R+ ++ QI+ W R ++ ++ +
Sbjct: 82 TE------LKFYQRA-AKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRF 134
Query: 179 GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENIL--FVSPEYL 236
G L N R F V ++ ++L+ + ++H+ +H D+K N+L + +P+ +
Sbjct: 135 GSDLQKIYEANAKR-FSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQV 193
Query: 237 KIPDYKVTAR-SPTDVN-YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVIL 294
+ DY + R P V+ Y PK I+F S HN + +R R IL
Sbjct: 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSI----DAHNGVAPSR--RGDLEIL 247
Query: 295 G 295
G
Sbjct: 248 G 248
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 107/268 (39%), Gaps = 34/268 (12%)
Query: 55 RVHADHASMFVKGLAQNGTPQWRNDDKDGHYLFALGENLTSRYKILRKIGEGTFGQVLDC 114
R+H + + + GL P D + FA + T+ I + +G G FG+V
Sbjct: 6 RLHFGNGHLKLPGLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSG 64
Query: 115 ---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLKRYDRSGSRCVQIRNWFDYRN 169
L + +VAIK ++ +K R + E ++ ++D +++
Sbjct: 65 RLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---GQFDHP--NIIRLEGVVTKSK 119
Query: 170 HICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLRLIHTDLKPENI 228
+ IV E M SL FLRK++ + + LV + R + + ++ D+ +H DL NI
Sbjct: 120 PVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNI 178
Query: 229 LFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYR 288
L S K+ D+ + R D + I + +
Sbjct: 179 LINSNLVCKVSDFGL-GRVLEDDPEAAYTTRGGKIPI--------------------RWT 217
Query: 289 APEVILGLGWSYPCDMWSVGCILIELCS 316
+PE I ++ D+WS G +L E+ S
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 83/222 (37%), Gaps = 39/222 (17%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSI------KKYREAAMTEIDVLELLKRYDRSG 155
+IG G FG+V R VA+K R K+ + A +LK+Y S
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA-------RILKQY--SH 171
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ + I IV E++ G FLR R L++ +G + ++
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG-DAAAGMEYLE 230
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
IH DL N L LKI D+ ++ R D Y S ++ +
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMS-REEADGVY----AASGGLRQVPV------ 279
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE + +S D+WS G +L E S
Sbjct: 280 -----------KWTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 102/252 (40%), Gaps = 38/252 (15%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
S KI IG G FG+V + G+ VAIK ++ ++ R ++E ++
Sbjct: 13 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 72
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+ + +++ + I+ E M +L FLR N+ + + LV + R +
Sbjct: 73 EHPN-----IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIA 126
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT---ARSPTDVNYYKRLPKSSAIK 264
+ ++ ++ +H DL NIL S K+ D+ ++ + +D Y L I+
Sbjct: 127 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIR 186
Query: 265 VIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQT 323
+ APE I ++ D WS G ++ E+ S GE +
Sbjct: 187 ----------------------WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWD 224
Query: 324 HENLEHLAMMER 335
N + + +E+
Sbjct: 225 MSNQDVINAIEQ 236
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 96/229 (41%), Gaps = 33/229 (14%)
Query: 94 TSRYKILRKIGEGTFGQVLDC---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELL 148
+ I + +G G FG+V L + +VAIK ++ +K R + E ++
Sbjct: 32 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM--- 88
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
++D +++ + IV E M SL FLRK++ + + LV + R +
Sbjct: 89 GQFDHP--NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIA 145
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++ D+ +H DL NIL S K+ D+ ++ D P++
Sbjct: 146 SGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-------PEA------- 191
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
AY + + + +PE I ++ D+WS G +L E+ S
Sbjct: 192 ----AYTTRGGKIPI---RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 233
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 80/222 (36%), Gaps = 39/222 (17%)
Query: 102 KIGEGTFGQVLDCLDRETGETVAIKVVRSI------KKYREAAMTEIDVLELLKRYDRSG 155
+IG G FG+V R VA+K R K+ + A +LK+Y S
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA-------RILKQY--SH 171
Query: 156 SRCVQIRNWFDYRNHICIVFEML-GPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMH 214
V++ + I IV E++ G FLR R L++ +G + ++
Sbjct: 172 PNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVG-DAAAGMEYLE 230
Query: 215 DLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYE 274
IH DL N L LKI D+ ++ V + +K
Sbjct: 231 SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVK---------- 280
Query: 275 HQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE + +S D+WS G +L E S
Sbjct: 281 ------------WTAPEALNYGRYSSESDVWSFGILLWETFS 310
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 67/278 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTE------- 141
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E
Sbjct: 30 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 142 ---IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---- 194
++V+ LL + G + I + + N S Y ++N + P+
Sbjct: 90 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKTKG 139
Query: 195 -------------PVDLVREIG----RQLLECVAFMHDLRL--IHTDLKPENIL--FVSP 233
PVDL R + Q F+ + L + + PE++ F++
Sbjct: 140 ARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL 199
Query: 234 EYLKIPDYKV-------TARSPTDVNYYKR---LPKSSAIKVIDFGSTAYEHQEHNYIVS 283
E+L ++V +R + R L + + +K+ DFG +++ +Y+
Sbjct: 200 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 259
Query: 284 TR-----HYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE I ++ D+WS G +L E+ S
Sbjct: 260 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDC---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLK 149
+ I + +G G FG+V L + +VAIK ++ +K R + E ++
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---G 72
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++D +++ + IV E M SL FLRK++ + + LV + R +
Sbjct: 73 QFDHP--NIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 129
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++ D+ +H DL NIL S K+ D+ ++ D P++
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-------PEA-------- 174
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
AY + + + +PE I ++ D+WS G +L E+ S
Sbjct: 175 ---AYTTRGGKIPI---RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 67/278 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTE------- 141
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E
Sbjct: 28 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 142 ---IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---- 194
++V+ LL + G + I + + N S Y ++N + P+
Sbjct: 88 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKTKG 137
Query: 195 -------------PVDLVREIG----RQLLECVAFMHDLRL--IHTDLKPENIL--FVSP 233
PVDL R + Q F+ + L + + PE++ F++
Sbjct: 138 ARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL 197
Query: 234 EYLKIPDYKV-------TARSPTDVNYYKR---LPKSSAIKVIDFGSTAYEHQEHNYIVS 283
E+L ++V +R + R L + + +K+ DFG +++ +Y+
Sbjct: 198 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 257
Query: 284 TR-----HYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE I ++ D+WS G +L E+ S
Sbjct: 258 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 96/228 (42%), Gaps = 33/228 (14%)
Query: 95 SRYKILRKIGEGTFGQVLDC---LDRETGETVAIKVVRS--IKKYREAAMTEIDVLELLK 149
+ I + +G G FG+V L + +VAIK ++ +K R + E ++
Sbjct: 16 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM---G 72
Query: 150 RYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLLE 208
++D +++ + IV E M SL FLRK++ + + LV + R +
Sbjct: 73 QFDHP--NIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGML-RGIAS 129
Query: 209 CVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDF 268
+ ++ D+ +H DL NIL S K+ D+ ++ D P++
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-------PEA-------- 174
Query: 269 GSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
AY + + + +PE I ++ D+WS G +L E+ S
Sbjct: 175 ---AYTTRGGKIPI---RWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 216
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGS 156
L+ +G G FG V + GE++ I V + K R++ D + + D +
Sbjct: 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA-- 75
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + + + SL D +R++ P L+ G Q+ + + ++ +
Sbjct: 76 HIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEH 134
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD-----VNYYKRLPKSSAIKVIDFGST 271
++H +L N+L SP +++ D+ V P D + K K A++ I FG
Sbjct: 135 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK- 193
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
Y HQ WSY +W + E +G L + + LE
Sbjct: 194 -YTHQSDV------------------WSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 231
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.4 bits (85), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 67/278 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTE------- 141
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E
Sbjct: 23 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 82
Query: 142 ---IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---- 194
++V+ LL + G + I + + N S Y ++N + P+
Sbjct: 83 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKTKG 132
Query: 195 -------------PVDLVREIG----RQLLECVAFMHDLRL--IHTDLKPENIL--FVSP 233
PVDL R + Q F+ + L + + PE++ F++
Sbjct: 133 ARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL 192
Query: 234 EYLKIPDYKV-------TARSPTDVNYYKR---LPKSSAIKVIDFGSTAYEHQEHNYIVS 283
E+L ++V +R + R L + + +K+ DFG +++ +Y+
Sbjct: 193 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 252
Query: 284 TR-----HYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE I ++ D+WS G +L E+ S
Sbjct: 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 114/278 (41%), Gaps = 67/278 (24%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDR-ETGETVAIKVVRSIKKYRE--AAMTE------- 141
R K+ + +G G FGQV++ +D+ T TVA+K+++ + E A M+E
Sbjct: 21 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 80
Query: 142 ---IDVLELLKRYDRSGSRCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPF---- 194
++V+ LL + G + I + + N S Y ++N + P+
Sbjct: 81 GHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL----------STYLRSKRNEFVPYKTKG 130
Query: 195 -------------PVDLVREIG----RQLLECVAFMHDLRL--IHTDLKPENIL--FVSP 233
PVDL R + Q F+ + L + + PE++ F++
Sbjct: 131 ARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTL 190
Query: 234 EYLKIPDYKV-------TARSPTDVNYYKR---LPKSSAIKVIDFGSTAYEHQEHNYIVS 283
E+L ++V +R + R L + + +K+ DFG +++ +Y+
Sbjct: 191 EHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK 250
Query: 284 TR-----HYRAPEVILGLGWSYPCDMWSVGCILIELCS 316
+ APE I ++ D+WS G +L E+ S
Sbjct: 251 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLP 258
Q+ + +A++ + +H D+ NIL SPE +K+ D+ ++ R D +YYK RLP
Sbjct: 121 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLP 177
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLP 258
Q+ + +A++ + +H D+ NIL SPE +K+ D+ ++ R D +YYK RLP
Sbjct: 133 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLP 189
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 205 QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYK----RLP 258
Q+ + +A++ + +H D+ NIL SPE +K+ D+ ++ R D +YYK RLP
Sbjct: 117 QICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS-RYIEDEDYYKASVTRLP 173
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 93/237 (39%), Gaps = 31/237 (13%)
Query: 100 LRKIGEGTFGQVLDCLDRETGETVAIKVVRSI---KKYREAAMTEIDVLELLKRYDRSGS 156
L+ +G G FG V + GE++ I V + K R++ D + + D +
Sbjct: 36 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHA-- 93
Query: 157 RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDL 216
V++ + + + SL D +R++ P L+ G Q+ + + ++ +
Sbjct: 94 HIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGP-QLLLNWGVQIAKGMYYLEEH 152
Query: 217 RLIHTDLKPENILFVSPEYLKIPDYKVTARSPTD-----VNYYKRLPKSSAIKVIDFGST 271
++H +L N+L SP +++ D+ V P D + K K A++ I FG
Sbjct: 153 GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK- 211
Query: 272 AYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCSGEALFQTHENLE 328
Y HQ WSY +W + E +G L + + LE
Sbjct: 212 -YTHQSDV------------------WSYGVTVWELMTFGAEPYAGLRLAEVPDLLE 249
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 54/245 (22%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLE 146
R + + +GEG FGQV+ LD++ VA+K+++S ++ + ++E+++++
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 129
Query: 147 LLKRYDRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-------NYRPFPV 196
++ ++ + C Q D ++ + + G +L ++L+ +Y P
Sbjct: 130 MIGKHKNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHN 183
Query: 197 DLVREIGRQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
+ + L+ C + ++ + IH DL N+L +KI D+ + AR
Sbjct: 184 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIH 242
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
++YYK+ + APE + +++ D+WS G
Sbjct: 243 HIDYYKKTTNGRL---------------------PVKWMAPEALFDRIYTHQSDVWSFGV 281
Query: 310 ILIEL 314
+L E+
Sbjct: 282 LLWEI 286
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 54/245 (22%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLE 146
R + + +GEG FGQV+ LD++ VA+K+++S ++ + ++E+++++
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 80
Query: 147 LLKRYDRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-------NYRPFPV 196
++ ++ + C Q D ++ + + G +L ++L+ +Y P
Sbjct: 81 MIGKHKNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHN 134
Query: 197 DLVREIGRQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
+ + L+ C + ++ + IH DL N+L +KI D+ + AR
Sbjct: 135 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIH 193
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
++YYK+ + APE + +++ D+WS G
Sbjct: 194 HIDYYKKTTNGRL---------------------PVKWMAPEALFDRIYTHQSDVWSFGV 232
Query: 310 ILIEL 314
+L E+
Sbjct: 233 LLWEI 237
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 54/245 (22%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLE 146
R + + +GEG FGQV+ LD++ VA+K+++S ++ + ++E+++++
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 77
Query: 147 LLKRYDRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-------NYRPFPV 196
++ ++ + C Q D ++ + + G +L ++L+ +Y P
Sbjct: 78 MIGKHKNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHN 131
Query: 197 DLVREIGRQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
+ + L+ C + ++ + IH DL N+L +KI D+ + AR
Sbjct: 132 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIH 190
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
++YYK+ + APE + +++ D+WS G
Sbjct: 191 HIDYYKKTTNGRL---------------------PVKWMAPEALFDRIYTHQSDVWSFGV 229
Query: 310 ILIEL 314
+L E+
Sbjct: 230 LLWEI 234
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 54/245 (22%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLE 146
R + + +GEG FGQV+ LD++ VA+K+++S ++ + ++E+++++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 147 LLKRYDRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-------NYRPFPV 196
++ ++ + C Q D ++ + + G +L ++L+ +Y P
Sbjct: 89 MIGKHKNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHN 142
Query: 197 DLVREIGRQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
+ + L+ C + ++ + IH DL N+L +KI D+ + AR
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIH 201
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
++YYK+ + APE + +++ D+WS G
Sbjct: 202 HIDYYKKTTNGRL---------------------PVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 310 ILIEL 314
+L E+
Sbjct: 241 LLWEI 245
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.2 bits (82), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 54/245 (22%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLE 146
R + + +GEG FGQV+ LD++ VA+K+++S ++ + ++E+++++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 88
Query: 147 LLKRYDRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-------NYRPFPV 196
++ ++ + C Q D ++ + + G +L ++L+ +Y P
Sbjct: 89 MIGKHKNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQAREPPGLEYSYNPSHN 142
Query: 197 DLVREIGRQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
+ + L+ C + ++ + IH DL N+L +KI D+ + AR
Sbjct: 143 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIH 201
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
++YYK+ + APE + +++ D+WS G
Sbjct: 202 HIDYYKKTTNGRL---------------------PVKWMAPEALFDRIYTHQSDVWSFGV 240
Query: 310 ILIEL 314
+L E+
Sbjct: 241 LLWEI 245
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/245 (19%), Positives = 104/245 (42%), Gaps = 54/245 (22%)
Query: 96 RYKILRKIGEGTFGQVLDC----LDRETGE---TVAIKVVRSIKKYREAA--MTEIDVLE 146
R + + +GEG FGQV+ LD++ VA+K+++S ++ + ++E+++++
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 81
Query: 147 LLKRYDRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKN-------NYRPFPV 196
++ ++ + C Q D ++ + + G +L ++L+ +Y P
Sbjct: 82 MIGKHKNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLQARRPPGLEYSYNPSHN 135
Query: 197 DLVREIGRQLLEC-------VAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPT 249
+ + L+ C + ++ + IH DL N+L +KI D+ + AR
Sbjct: 136 PEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGL-ARDIH 194
Query: 250 DVNYYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGC 309
++YYK+ + APE + +++ D+WS G
Sbjct: 195 HIDYYKKTTNGRL---------------------PVKWMAPEALFDRIYTHQSDVWSFGV 233
Query: 310 ILIEL 314
+L E+
Sbjct: 234 LLWEI 238
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 36.2 bits (82), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 125/320 (39%), Gaps = 64/320 (20%)
Query: 77 RNDDKDGHYLFALGENLTSRY-KILRKIGEGTFGQVLDCLDRETGETVA---IKVVRSIK 132
+ DD + A+G + R+ K +IG G+F V LD ET VA ++ + K
Sbjct: 7 QQDDIEELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTK 66
Query: 133 KYREAAMTEIDVLE------LLKRYDR-----SGSRCVQIRNWFDYRNHICIVFEM-LGP 180
R+ E + L+ +++ YD G +C I +V E+
Sbjct: 67 SERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKC------------IVLVTELXTSG 114
Query: 181 SLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR--LIHTDLKPENILFVSPEYLKI 238
+L +L++ ++ + ++R RQ+L+ + F+H +IH DLK +NI P
Sbjct: 115 TLKTYLKR--FKVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP----- 167
Query: 239 PDYKVTARSPTDVNYYKRLPKSSAIKVIDFG-STAYEHQEHNYIVSTRHYRAPEVILGLG 297
+ ++K+ D G +T ++ T + APE
Sbjct: 168 ---------------------TGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEX-YEEK 205
Query: 298 WSYPCDMWSVGCILIELCSGEALFQTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVR 357
+ D+++ G +E + E + +N + RV + +V P K +
Sbjct: 206 YDESVDVYAFGXCXLEXATSEYPYSECQNAAQI--YRRVTSGVKPASFDKVAIPEVKEII 263
Query: 358 RGRLDWPEGATSRESIKAVL 377
G + + R SIK +L
Sbjct: 264 EGCI--RQNKDERYSIKDLL 281
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 93/232 (40%), Gaps = 54/232 (23%)
Query: 158 CVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGRQLLECVAFMHDLR 217
C + F Y I E+ +L +++ + ++ ++ + + +Q +A +H L
Sbjct: 85 CTEKDRQFQY-----IAIELCAATLQEYVEQKDFAHLGLEPITLL-QQTTSGLAHLHSLN 138
Query: 218 LIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVIDFGSTAYEHQE 277
++H DLKP NIL P K+ A +D K+L G ++ +
Sbjct: 139 IVHRDLKPHNILISMPN----AHGKIKAMI-SDFGLCKKLA---------VGRHSFSRR- 183
Query: 278 HNYIVSTRHYRAPEVI---LGLGWSYPCDMWSVGC----------------------ILI 312
+ + T + APE++ +Y D++S GC IL+
Sbjct: 184 -SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILL 242
Query: 313 ELCSGEALF-QTHENLEHLAMMERVLGPIPQHMLKRVDKPAEKFVRRGRLDW 363
CS + L + HE++ ++E+++ PQ +P+ K V + W
Sbjct: 243 GACSLDCLHPEKHEDVIARELIEKMIAMDPQ------KRPSAKHVLKHPFFW 288
Score = 29.3 bits (64), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 399 DLLQGLLRYDPSSRLTAHDALKHPFF 424
+L++ ++ DP R +A LKHPFF
Sbjct: 262 ELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 32/249 (12%)
Query: 94 TSRYKILRKIGEGTFGQVLDCLDRETGE---TVAIKVVRS--IKKYREAAMTEIDVLELL 148
S KI IG G FG+V + G+ VAIK ++ ++ R ++E ++
Sbjct: 15 VSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQF 74
Query: 149 KRYDRSGSRCVQIRNWFDYRNHICIVFE-MLGPSLYDFLRKNNYRPFPVDLVREIGRQLL 207
+ + +++ + I+ E M +L FLR N+ + + LV + R +
Sbjct: 75 EHPN-----IIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGML-RGIA 128
Query: 208 ECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVNYYKRLPKSSAIKVID 267
+ ++ ++ +H DL NIL S K+ D+ ++ + L ++S
Sbjct: 129 SGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLS----------RFLEENS------ 172
Query: 268 FGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILIELCS-GEALFQTHEN 326
S E + R + APE I ++ D WS G ++ E+ S GE + N
Sbjct: 173 --SDPTETSSLGGKIPIR-WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSN 229
Query: 327 LEHLAMMER 335
+ + +E+
Sbjct: 230 QDVINAIEQ 238
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 9/153 (5%)
Query: 96 RYKILRKIGEGTFGQVLDCLDRETGETVAIKVVRSIKKYREAAMTEIDVLELLKRYDRSG 155
R ++ R IGEG FG V + +++ K ++ E + E L
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDH 70
Query: 156 SRCVQIRNWFDYRNHICIVFEM--LGPSLYDFLRKNNYRPFPVDLVREI--GRQLLECVA 211
V++ N + I+ E+ LG L FL+ R F +DL I QL +A
Sbjct: 71 PHIVKLIGVIT-ENPVWIIMELCTLG-ELRSFLQ---VRKFSLDLASLILYAYQLSTALA 125
Query: 212 FMHDLRLIHTDLKPENILFVSPEYLKIPDYKVT 244
++ R +H D+ N+L S + +K+ D+ ++
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEXSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR D+N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-AR---DIN 208
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
K++ ++ + APE + +++ D+WS G ++
Sbjct: 209 NIDXXKKTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 58/242 (23%)
Query: 101 RKIGEGTFGQVLDC----LDRETGE---TVAIKVVR--SIKKYREAAMTEIDVLELLKRY 151
+ +GEG FGQV+ +D++ + TVA+K+++ + +K ++E+++++++ ++
Sbjct: 41 KPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKH 100
Query: 152 DRSGS---RCVQIRNWFDYRNHICIVFEMLGPSLYDFLRKNNYRPFPVDLVREIGR---- 204
+ C Q D ++ + + G +L ++LR RP ++ +I R
Sbjct: 101 KNIINLLGACTQ-----DGPLYVIVEYASKG-NLREYLRAR--RPPGMEYSYDINRVPEE 152
Query: 205 ------------QLLECVAFMHDLRLIHTDLKPENILFVSPEYLKIPDYKVTARSPTDVN 252
QL + ++ + IH DL N+L +KI D+ + AR D+N
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGL-AR---DIN 208
Query: 253 YYKRLPKSSAIKVIDFGSTAYEHQEHNYIVSTRHYRAPEVILGLGWSYPCDMWSVGCILI 312
K++ ++ + APE + +++ D+WS G ++
Sbjct: 209 NIDXXKKTTNGRL------------------PVKWMAPEALFDRVYTHQSDVWSFGVLMW 250
Query: 313 EL 314
E+
Sbjct: 251 EI 252
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,890,726
Number of Sequences: 62578
Number of extensions: 601661
Number of successful extensions: 4758
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 132
Number of HSP's that attempted gapping in prelim test: 1374
Number of HSP's gapped (non-prelim): 1643
length of query: 432
length of database: 14,973,337
effective HSP length: 102
effective length of query: 330
effective length of database: 8,590,381
effective search space: 2834825730
effective search space used: 2834825730
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)