Query 047399
Match_columns 399
No_of_seqs 156 out of 1195
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 18:53:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047399.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047399hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2bgh_A Vinorine synthase; VS, 100.0 1.9E-77 6.5E-82 596.1 37.2 382 1-399 1-417 (421)
2 4g22_A Hydroxycinnamoyl-COA sh 100.0 2.2E-76 7.4E-81 591.5 38.8 375 1-389 4-434 (439)
3 2e1v_A Acyl transferase; BAHD 100.0 5.4E-70 1.8E-74 547.8 31.5 376 1-395 1-448 (454)
4 2xr7_A Malonyltransferase; xen 100.0 1.2E-69 4E-74 545.2 29.7 373 5-395 2-448 (453)
5 2rkv_A Trichothecene 3-O-acety 100.0 8.7E-64 3E-68 502.4 31.3 363 26-399 5-449 (451)
6 1q9j_A PAPA5, polyketide synth 99.0 1E-07 3.5E-12 93.3 23.0 250 24-293 6-313 (422)
7 2jgp_A Tyrocidine synthetase 3 98.6 8.9E-06 3.1E-10 81.9 24.4 249 24-293 95-400 (520)
8 2xhg_A Tyrocidine synthetase A 98.4 4.5E-05 1.5E-09 75.4 24.2 254 24-294 16-336 (466)
9 1l5a_A Amide synthase, VIBH; n 98.4 4.6E-05 1.6E-09 74.7 21.7 221 61-293 35-304 (436)
10 4hvm_A Tlmii; PSI-biology, mid 98.3 3.6E-05 1.2E-09 76.9 20.8 253 24-294 12-328 (493)
11 2vsq_A Surfactin synthetase su 98.0 0.00041 1.4E-08 77.7 22.2 222 61-293 49-327 (1304)
12 3fot_A 15-O-acetyltransferase; 97.3 0.0021 7.2E-08 64.6 12.4 217 57-275 72-365 (519)
13 3cla_A Type III chloramphenico 71.3 2.9 0.0001 36.4 3.6 29 124-152 181-209 (213)
14 2i9d_A Chloramphenicol acetylt 69.9 3.3 0.00011 36.2 3.6 28 124-151 189-216 (217)
15 1q23_A Chloramphenicol acetylt 69.6 3.3 0.00011 36.2 3.6 29 124-152 185-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 66.9 4 0.00014 36.2 3.6 29 124-152 204-232 (239)
17 3rqc_A Probable lipoamide acyl 66.6 3.5 0.00012 36.2 3.1 30 124-153 187-216 (224)
18 1scz_A E2, dihydrolipoamide su 65.9 4.4 0.00015 35.8 3.6 30 124-153 196-225 (233)
19 1dpb_A Dihydrolipoyl-transacet 65.7 4.4 0.00015 36.1 3.6 30 124-153 208-237 (243)
20 2ii3_A Lipoamide acyltransfera 64.3 4.8 0.00016 36.2 3.6 29 124-152 224-252 (262)
21 2k1o_A Putative; repressor, tr 59.7 24 0.00081 23.4 5.2 44 187-237 14-57 (66)
22 3mae_A 2-oxoisovalerate dehydr 58.8 6.9 0.00024 35.1 3.6 30 124-153 210-239 (256)
23 3l60_A Branched-chain alpha-ke 57.4 7.6 0.00026 34.7 3.6 30 124-153 205-234 (250)
24 2xl1_A Arginine attenuator pep 48.7 9.9 0.00034 20.1 1.7 18 214-231 7-24 (26)
25 1x93_A Hypothetical protein HP 47.2 27 0.00093 22.3 3.8 37 190-233 3-39 (55)
26 3dva_I Dihydrolipoyllysine-res 37.7 6.9 0.00024 37.9 0.0 30 124-153 391-420 (428)
No 1
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.9e-77 Score=596.11 Aligned_cols=382 Identities=36% Similarity=0.614 Sum_probs=319.0
Q ss_pred CcceEEEeeeeeeeCCCCCCCCCCcccCCcccccCCCccceEEEEEeCCCCcccCccccchHHHHHHHHHhhccccccCe
Q 047399 1 MKIDVETMSKEMIKPSTPTPSQLRHYQFSHLDQIGPPVYISLLYFYHLDDHKLVSNNHLFSNSLKSSLSNVLTKYYPLAG 80 (399)
Q Consensus 1 ~~~~v~v~~~~~V~P~~~~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laG 80 (399)
|.|+|+++++++|+|+.|||.+.+.++||+||++.++.|++.++||+.++....+.... +++||+||+++|++||||||
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~-~~~Lk~sLs~~L~~~~plAG 79 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQT-SQHLKQSLSKVLTHFYPLAG 79 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHH-HHHHHHHHHHHTTTSGGGGS
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhH-HHHHHHHHHHHhhhcchhcc
Confidence 88999999999999999988655689999999987789999999999754300123356 89999999999999999999
Q ss_pred eecC-ceeeecCCCeeEEEEecC----CCC---------C---C------------CCceEEEEEEEecCCcEEEEEeec
Q 047399 81 RIKN-NYVDCNDEGVVFSEAKEK----DVV---------S---V------------DGLAIAIQVNIFNCGNVAIAVMIS 131 (399)
Q Consensus 81 rl~~-~~i~~~~~gv~f~~a~~~----d~l---------~---P------------~~P~l~vQvt~~~cgG~~lg~~~~ 131 (399)
||++ ++|+||++||.|+||+++ |++ + | +.|++.+|||+|+|||++||+++|
T Consensus 80 Rl~~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~ 159 (421)
T 2bgh_A 80 RINVNSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLS 159 (421)
T ss_dssp EEETTTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEE
T ss_pred ccCCCcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEee
Confidence 9996 999999999999999876 211 1 2 278999999999999999999999
Q ss_pred ceecchhhHHHHHHHHHHHhcCCCCCCCCcccc-ccccCC-CCCCCCCCCCCCCCCCceEEEEEEECHHHHHHHHHHhcC
Q 047399 132 HRIEDGSSLITFTKTWAAVARGESENILPEFVA-AKLFPP-KDAGGSSGTSFDPRPKKVVLKKFLFEGSKITTLRDKYGL 209 (399)
Q Consensus 132 H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr-~~l~~~-~~~p~~~p~~~~~~~~~~~~~~f~~~~~~i~~Lk~~~~~ 209 (399)
|.++||.|+.+|+++||++|||......|.+|| +.+.|+ ++.|. | .+....++++++|+|++++|++||+++.+
T Consensus 160 H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~l~p~~~~~~~--~--~~~~~~~~~~~~f~f~~~~i~~LK~~a~~ 235 (421)
T 2bgh_A 160 HKIADVLSLATFLNAWTATCRGETEIVLPNFDLAARHFPPVDNTPS--P--ELVPDENVVMKRFVFDKEKIGALRAQASS 235 (421)
T ss_dssp TTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHHHSCCCTTCCC--C--CCCCCSSEEEEEEEECHHHHHHHHHHTC-
T ss_pred EEechHHHHHHHHHHHHHHhcCCCCCCCCccccccccCCCcccCCC--C--ccCCccceEEEEEEECHHHHHHHHHHhhc
Confidence 999999999999999999999975446789999 777765 55543 1 22345678999999999999999999986
Q ss_pred CCC-CCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccccCCCCCCCCccchhhhhhheecc-c-cc-HHHHH
Q 047399 210 DNL-IYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKRMEPQLPADSFGNLFAFAVTILEE-N-HD-NRMVN 285 (399)
Q Consensus 210 ~~~-~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~-~-~~-~~~A~ 285 (399)
+.. .++|+||+|+||+|+|+++||....++++++.+.++||+|+|++||+|++||||++..+.+.+++ + .+ +++|.
T Consensus 236 ~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~~~~l~~~a~ 315 (421)
T 2bgh_A 236 ASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKNKFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEWDKDFPDLIG 315 (421)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHSCCCSCEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTCCCCGGGGHH
T ss_pred cCCCCCCchhHhHHHHHHHHHHHHhcccCCCCCceEEEEEecCccccCCCCCCCccceEEEEEEEEecccccccHHHHHH
Confidence 543 67999999999999999999875433457999999999999999999999999999998888777 4 45 99999
Q ss_pred HHHHHHHhhhHHHHHhhhhhHHHHHHHHHhcCCccccCCCCeEEEeccCCCCCccccccCCcceeeeecccCCCcEEEEe
Q 047399 286 KFRDAIGKIDKDYLKAKNVEHSELIDLAITNGERFDKVELGYCIISSLCKFPVYEADFGLGKPISVAWGCFPYKNVIHFM 365 (399)
Q Consensus 286 ~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~i~ 365 (399)
.||+++.+++++++++ +.+..+.. . .. .+.+.+.+|||+++++|++|||||+|+++++...+.+|+++++
T Consensus 316 ~ir~ai~~~~~~~~~~----~~~~~~~~-~---~~--~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~ 385 (421)
T 2bgh_A 316 PLRTSLEKTEDDHNHE----LLKGMTCL-Y---EL--EPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLM 385 (421)
T ss_dssp HHHHHTCCCSSCHHHH----HHHHHHHH-H---TS--CGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEE
T ss_pred HHHHHHHHHHHHHHHH----HHHHHHHh-h---cc--CCCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEE
Confidence 9999999999888886 22222211 1 11 1234599999999999999999999999998876678999999
Q ss_pred ecCCCCcEEEEEeCCHHHHHHhhcCHhhhhccCC
Q 047399 366 DTKSGDGIEVWVHLEEEVMAIFENDQELLAYVST 399 (399)
Q Consensus 366 p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~ 399 (399)
|+++++|++|.|+|++++|++|++ ||.+|+++
T Consensus 386 p~~~~~gi~v~v~L~~~~m~~f~~--e~~~~~~~ 417 (421)
T 2bgh_A 386 DTRSGDGVEAWLPMAEDEMAMLPV--ELLSLVDS 417 (421)
T ss_dssp ECTTSSSEEEEEEEEHHHHHHSCH--HHHTTBCC
T ss_pred ecCCCCeEEEEEEcCHHHHHHHHH--HHHHhhcC
Confidence 999888999999999999999998 99999875
No 2
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=2.2e-76 Score=591.55 Aligned_cols=375 Identities=27% Similarity=0.455 Sum_probs=308.6
Q ss_pred CcceEEEeeeeeeeCCCCCCCCCCcccCCcccccCCCccceEEEEEeCCCCcccCccccchHHHHHHHHHhhccccccCe
Q 047399 1 MKIDVETMSKEMIKPSTPTPSQLRHYQFSHLDQIGPPVYISLLYFYHLDDHKLVSNNHLFSNSLKSSLSNVLTKYYPLAG 80 (399)
Q Consensus 1 ~~~~v~v~~~~~V~P~~~~~~~~~~~~Ls~lD~~~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laG 80 (399)
|+|+|+++++++|+|+.|+|. +.++||+||+++++.|++.+|||+.+.. +.... +++||+||+++|++||||||
T Consensus 4 ~~~~V~i~~~~~V~P~~~tp~--~~~~LS~lD~~~~~~~~~~~~~y~~~~~---~~~~~-~~~Lk~sLs~~L~~f~plAG 77 (439)
T 4g22_A 4 GSMKIEVKESTMVRPAQETPG--RNLWNSNVDLVVPNFHTPSVYFYRPTGS---SNFFD-AKVLKDALSRALVPFYPMAG 77 (439)
T ss_dssp --CCEEEEEEEEECCSSCCCC--CEECCCHHHHSCCTTCCCEEEEECCCSC---TTTTC-HHHHHHHHHHHTTTTGGGGC
T ss_pred CceEEEEeeeEEEeCCCCCCC--CeecCChhHhCccccceeeEEEEcCCCC---ccccH-HHHHHHHHHHHHhhccccce
Confidence 358999999999999999874 4799999999988899999999997543 22346 89999999999999999999
Q ss_pred eec----C-ceeeecCCCeeEEEEecC----CCCC-----------C---------CCceEEEEEEEecCCcEEEEEeec
Q 047399 81 RIK----N-NYVDCNDEGVVFSEAKEK----DVVS-----------V---------DGLAIAIQVNIFNCGNVAIAVMIS 131 (399)
Q Consensus 81 rl~----~-~~i~~~~~gv~f~~a~~~----d~l~-----------P---------~~P~l~vQvt~~~cgG~~lg~~~~ 131 (399)
||+ + ++|+||++||.|+||+++ |+.. | +.|++.+|||+|+|||++||+++|
T Consensus 78 Rl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~ 157 (439)
T 4g22_A 78 RLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFAPTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMR 157 (439)
T ss_dssp EEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCCCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEEC
T ss_pred eeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCCCCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEee
Confidence 998 2 899999999999999986 2211 2 369999999999999999999999
Q ss_pred ceecchhhHHHHHHHHHHHhcCCCCCCCCccccccccCCCCCCC-------CCCC-C---CC----CCC-CceEEEEEEE
Q 047399 132 HRIEDGSSLITFTKTWAAVARGESENILPEFVAAKLFPPKDAGG-------SSGT-S---FD----PRP-KKVVLKKFLF 195 (399)
Q Consensus 132 H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~l~~~~~~p~-------~~p~-~---~~----~~~-~~~~~~~f~~ 195 (399)
|.++||.|+.+|+++||++|||.....+|++||+.+.+ +++|. +.+. . .. ..+ .+++.++|+|
T Consensus 158 H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f 236 (439)
T 4g22_A 158 HHAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLRA-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKL 236 (439)
T ss_dssp TTTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGCC-CSSCCCSSCCGGGSCCC---------------CEEEEEEEE
T ss_pred eccCcHHHHHHHHHHHHHHhCCCCCCCCCccccccccC-CCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEE
Confidence 99999999999999999999997666789999986642 33322 1111 0 00 112 5789999999
Q ss_pred CHHHHHHHHHHhcCCC-CCCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccccCCCCCCCCccchhhhhhhe
Q 047399 196 EGSKITTLRDKYGLDN-LIYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKRMEPQLPADSFGNLFAFAVTI 274 (399)
Q Consensus 196 ~~~~i~~Lk~~~~~~~-~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~ 274 (399)
++++|++||+++..+. ..++|+||+|+||+|+|+++||+..+ ++.+++.++||+|+|++||+|++||||++..+.+.
T Consensus 237 s~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~--~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~ 314 (439)
T 4g22_A 237 TREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEV--DQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPI 314 (439)
T ss_dssp CHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCT--TCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCE
T ss_pred CHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCC--CCcEEEEEEEcccCCCCCCCCCCcccceeehhhcc
Confidence 9999999999997653 46799999999999999999997643 58999999999999999999999999999998888
Q ss_pred ecc-cc---c-HHHHHHHHHHHHhhhHHHHHhhhhhHHHHHHHHHhcCCccc----cCCCCeEEEeccCCCCCccccccC
Q 047399 275 LEE-NH---D-NRMVNKFRDAIGKIDKDYLKAKNVEHSELIDLAITNGERFD----KVELGYCIISSLCKFPVYEADFGL 345 (399)
Q Consensus 275 ~~~-~~---~-~~~A~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~tsw~~~~~y~~DFG~ 345 (399)
+++ |+ + +++|..||+++.+++++|+++ +.++++. .++...+. ..+...+.+|||+++++|++||||
T Consensus 315 ~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~vssw~r~~~y~~DFGw 389 (439)
T 4g22_A 315 AIAGDLEFKPVWYAASKIHDALARMDNDYLRS----ALDYLEL-QPDLKALVRGAHTFKCPNLGITSWVRLPIHDADFGW 389 (439)
T ss_dssp EEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHH----HHHHHHT-CSCSTTCCCCHHHHCTTCEEEEECTTSCTTCCCCSS
T ss_pred eEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHH----HHHHHHh-CccchhhcccCCcCcCCcEEEeecCcCCccccccCC
Confidence 877 54 5 999999999999999999998 3333321 11111111 111334999999999999999999
Q ss_pred CcceeeeecccCCCcEEEEeecCC-CCcEEEEEeCCHHHHHHhhc
Q 047399 346 GKPISVAWGCFPYKNVIHFMDTKS-GDGIEVWVHLEEEVMAIFEN 389 (399)
Q Consensus 346 G~P~~v~~~~~~~~g~~~i~p~~~-~~g~ev~v~L~~~~m~~l~~ 389 (399)
|+|+++++...+.+|.++++|+++ +||++|.|+|++++|++|++
T Consensus 390 GkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~ 434 (439)
T 4g22_A 390 GRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQS 434 (439)
T ss_dssp CCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHH
T ss_pred CCcceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHH
Confidence 999999988767789999999865 45899999999999999986
No 3
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=5.4e-70 Score=547.76 Aligned_cols=376 Identities=21% Similarity=0.282 Sum_probs=296.7
Q ss_pred Cc--ceEEEeeeeeeeCCCCCCCCCCcccCCcccccC-CCccceEEEEEeCCCCcccC--ccccchHHHHHHHHHhhccc
Q 047399 1 MK--IDVETMSKEMIKPSTPTPSQLRHYQFSHLDQIG-PPVYISLLYFYHLDDHKLVS--NNHLFSNSLKSSLSNVLTKY 75 (399)
Q Consensus 1 ~~--~~v~v~~~~~V~P~~~~~~~~~~~~Ls~lD~~~-~~~y~~~~~~f~~~~~~~~~--~~~~~~~~L~~sL~~~L~~~ 75 (399)
|+ ++|+|+++++|+|+.++++ .+.++||+||+.. ...|++.++||+.++. .+ .... +++||+||+++|++|
T Consensus 1 ~~~~~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~--~~~~~~~~-~~~Lk~sLs~~L~~~ 76 (454)
T 2e1v_A 1 MASLPILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPIT--RSQFTETV-VPNIKHSLSITLKHF 76 (454)
T ss_dssp -----CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCC--HHHHHHTH-HHHHHHHHHHHHTTC
T ss_pred CCCCceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCC--cchhhHHH-HHHHHHHHHHHhhhc
Confidence 55 4899999999999987443 3689999999974 5569999999997543 11 2345 899999999999999
Q ss_pred cccCeeec--C-----ceeeec-CCCeeEEEEecC----CCCC-------------C-------C-----CceEEEEEEE
Q 047399 76 YPLAGRIK--N-----NYVDCN-DEGVVFSEAKEK----DVVS-------------V-------D-----GLAIAIQVNI 118 (399)
Q Consensus 76 p~laGrl~--~-----~~i~~~-~~gv~f~~a~~~----d~l~-------------P-------~-----~P~l~vQvt~ 118 (399)
|||||||+ + ++|+|+ ++||.|+||+++ |+.. | . .|++.+|||+
T Consensus 77 ~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~ 156 (454)
T 2e1v_A 77 YPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTL 156 (454)
T ss_dssp GGGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEE
T ss_pred cccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEE
Confidence 99999997 2 899999 599999999987 2211 2 1 2999999999
Q ss_pred ecCCcEEEEEeecceecchhhHHHHHHHHHHHhc-CCC-C-----CCCCccccccccCCC-------CCCCCC------C
Q 047399 119 FNCGNVAIAVMISHRIEDGSSLITFTKTWAAVAR-GES-E-----NILPEFVAAKLFPPK-------DAGGSS------G 178 (399)
Q Consensus 119 ~~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~-~-----~~~P~~dr~~l~~~~-------~~p~~~------p 178 (399)
|+|||++||+++||.++||.|+.+|+++||++|| |.. . ...|.+|| .+..|. ..+... +
T Consensus 157 f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~ 235 (454)
T 2e1v_A 157 FPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVT 235 (454)
T ss_dssp ETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSCCCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCC
T ss_pred ecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCCCCcccc-cCCCCCcchHHHHhhhccccccccCc
Confidence 9999999999999999999999999999999999 863 1 34689998 553211 000000 0
Q ss_pred CCCCCCCCceEEEEEEECHHHHHHHHHHhcCCCC--CCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccccC
Q 047399 179 TSFDPRPKKVVLKKFLFEGSKITTLRDKYGLDNL--IYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKRME 256 (399)
Q Consensus 179 ~~~~~~~~~~~~~~f~~~~~~i~~Lk~~~~~~~~--~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~ 256 (399)
. ....+.+.+.++|+|++++|++||+++..+.. .++|+||+|+||+|+|+++|| + ++.+++.++||+|+|++
T Consensus 236 ~-~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar---~--~~~~~l~~~vd~R~rl~ 309 (454)
T 2e1v_A 236 Q-SLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR---N--DKLQLFGFPIDRRARMK 309 (454)
T ss_dssp C-CCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH---C--CSEEEEEEEEECGGGSS
T ss_pred c-cCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc---C--CCceEEEEEecchhccC
Confidence 1 00123567899999999999999999875432 579999999999999999999 2 47999999999999999
Q ss_pred CCCCCCCccchhhhhhheecc-cc----c-HHHHHHHHHHHHhhhHHHHHhhhhhHHHH-HHHHHhcCCccccCCCCeEE
Q 047399 257 PQLPADSFGNLFAFAVTILEE-NH----D-NRMVNKFRDAIGKIDKDYLKAKNVEHSEL-IDLAITNGERFDKVELGYCI 329 (399)
Q Consensus 257 pplp~~Y~GN~~~~~~~~~~~-~~----~-~~~A~~ir~ai~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 329 (399)
||+|++||||++..+.+.+++ |+ + +++|..||+++.+++++|++. +... ..+|++....+ .+...+.
T Consensus 310 pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~ 383 (454)
T 2e1v_A 310 PPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDG----VLKDDMESFNDLVSEG--MPTTMTW 383 (454)
T ss_dssp SCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTT----CCCC-----CHHHHHC--CCSEEEE
T ss_pred CCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHH----HHHHHHHHHHHHHHhh--cCCceEE
Confidence 999999999999998888777 53 4 899999999999998777665 2111 12232221112 1223599
Q ss_pred EeccCCCCCccccccCCcceeeeecccCCCcEEEEeecCCCC-cEEEEEeCCHHHHHHhhcCHhhhh
Q 047399 330 ISSLCKFPVYEADFGLGKPISVAWGCFPYKNVIHFMDTKSGD-GIEVWVHLEEEVMAIFENDQELLA 395 (399)
Q Consensus 330 ~tsw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~~~~~ 395 (399)
+|||+++++|++|||||+|+++++...+.+|.++++|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 384 vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (454)
T 2e1v_A 384 VSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH--IFDD 448 (454)
T ss_dssp EECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH--HHHH
T ss_pred EecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH--HHHH
Confidence 999999999999999999999998876677999999987654 799999999999999964 5544
No 4
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.2e-69 Score=545.23 Aligned_cols=373 Identities=19% Similarity=0.305 Sum_probs=299.5
Q ss_pred EEEeeeeeeeCCCCCCCCCCcccCCccccc-CCCccceEEEEEeCCCCcccC--ccccchHHHHHHHHHhhccccccCee
Q 047399 5 VETMSKEMIKPSTPTPSQLRHYQFSHLDQI-GPPVYISLLYFYHLDDHKLVS--NNHLFSNSLKSSLSNVLTKYYPLAGR 81 (399)
Q Consensus 5 v~v~~~~~V~P~~~~~~~~~~~~Ls~lD~~-~~~~y~~~~~~f~~~~~~~~~--~~~~~~~~L~~sL~~~L~~~p~laGr 81 (399)
|+|+++++|+|+.++++ .+.++||+||+. +...|++.+|||+.+.. .+ .... +++||+||+++|++|||||||
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~--~~~~~~~~-~~~Lk~sLs~~L~~~~plAGR 77 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPIS--RPDFVQTI-IPTLKDSLSLTLKYYLPLAGN 77 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCC--SHHHHHTH-HHHHHHHHHHHHTTSGGGGSC
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCC--CchhHHHH-HHHHHHHHHHHhhhccccCee
Confidence 89999999999987443 368999999997 44569999999997543 12 3345 899999999999999999999
Q ss_pred ec-----C--ceeeec-CCCeeEEEEecC----CCC----C---------C-------C-----CceEEEEEEEecCCcE
Q 047399 82 IK-----N--NYVDCN-DEGVVFSEAKEK----DVV----S---------V-------D-----GLAIAIQVNIFNCGNV 124 (399)
Q Consensus 82 l~-----~--~~i~~~-~~gv~f~~a~~~----d~l----~---------P-------~-----~P~l~vQvt~~~cgG~ 124 (399)
|+ + ++|+|+ ++||.|+||+++ |+. . | . .|++.+|||+|+|||+
T Consensus 78 l~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~ 157 (453)
T 2xr7_A 78 VACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGI 157 (453)
T ss_dssp CEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEE
T ss_pred EEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcE
Confidence 95 2 899999 599999999987 211 0 2 1 7999999999999999
Q ss_pred EEEEeecceecchhhHHHHHHHHHHHhc-CC-C----CCCCCccccccccCCCCC-----CCCCC-CCC-C----CCCCc
Q 047399 125 AIAVMISHRIEDGSSLITFTKTWAAVAR-GE-S----ENILPEFVAAKLFPPKDA-----GGSSG-TSF-D----PRPKK 187 (399)
Q Consensus 125 ~lg~~~~H~v~Dg~~~~~fl~~wa~~~r-g~-~----~~~~P~~dr~~l~~~~~~-----p~~~p-~~~-~----~~~~~ 187 (399)
+||+++||.++||.|+.+|+++||++|| |. . ....|.+||+.+.+|..+ ..+.. +.. . ..+.+
T Consensus 158 ~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (453)
T 2xr7_A 158 SIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPD 237 (453)
T ss_dssp EEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCS
T ss_pred EEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCC
Confidence 9999999999999999999999999999 76 2 124689999877644321 00100 000 0 12346
Q ss_pred eEEEEEEECHHHHHHHHHHhcCCCC--CCCChhhhHHHHHHHHHHhhccCC--C-CCCCceEEEEEeecccccCCCCCCC
Q 047399 188 VVLKKFLFEGSKITTLRDKYGLDNL--IYPTRVEALSAFLWSRLAASTRIK--V-SPERPCMLVHAVNLRKRMEPQLPAD 262 (399)
Q Consensus 188 ~~~~~f~~~~~~i~~Lk~~~~~~~~--~~~St~d~l~A~lW~~~~~ar~~~--~-~~~~~~~l~~~vd~R~rl~pplp~~ 262 (399)
++.++|+|++++|++||+++..+.. .++|+||+|+||+|+|+++||... . ++++.+.+.++||+|+|++||+|++
T Consensus 238 ~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~ 317 (453)
T 2xr7_A 238 KVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPS 317 (453)
T ss_dssp CCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTT
T ss_pred ceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcc
Confidence 7789999999999999999875432 579999999999999999999752 1 2357999999999999999999999
Q ss_pred Cccchhhhhhheecc-cc----c-HHHHHHHHHHHHh--hhHH-HHHhhhhhHHHHHHHHHhcCCccccCCCCeEEEecc
Q 047399 263 SFGNLFAFAVTILEE-NH----D-NRMVNKFRDAIGK--IDKD-YLKAKNVEHSELIDLAITNGERFDKVELGYCIISSL 333 (399)
Q Consensus 263 Y~GN~~~~~~~~~~~-~~----~-~~~A~~ir~ai~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tsw 333 (399)
||||++..+.+.+++ |+ + +++|..||+++.+ ++++ |+++ + |+ +....+. +...+.+|||
T Consensus 318 Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~-~--~~-------~~~~~~~--~~~~~~vssw 385 (453)
T 2xr7_A 318 YFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG-S--WF-------KEYDKVD--AKRSLSVAGS 385 (453)
T ss_dssp BCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS-C--TT-------SCCCCSC--GGGEEEECSC
T ss_pred cccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh-H--HH-------HHHHhhc--cCCcEEEecc
Confidence 999999998887777 42 4 8999999999999 5677 7764 2 32 2222221 2235999999
Q ss_pred CCCCCccccccCCcceeeeecccCCCc--EEEEeecCCCC-cEEEEEeCCHHHHHHhhcCHhhhh
Q 047399 334 CKFPVYEADFGLGKPISVAWGCFPYKN--VIHFMDTKSGD-GIEVWVHLEEEVMAIFENDQELLA 395 (399)
Q Consensus 334 ~~~~~y~~DFG~G~P~~v~~~~~~~~g--~~~i~p~~~~~-g~ev~v~L~~~~m~~l~~d~~~~~ 395 (399)
+++++|++|||||+|+++++...+.+| .++++|+++++ |++|.|+|++++|++|++ +|.+
T Consensus 386 ~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~--~~~~ 448 (453)
T 2xr7_A 386 PKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA--MFTH 448 (453)
T ss_dssp SSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH--HHHH
T ss_pred ccCCccccccCCCcceEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH--HHHH
Confidence 999999999999999999988777778 88888877654 799999999999999964 5543
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=8.7e-64 Score=502.38 Aligned_cols=363 Identities=17% Similarity=0.225 Sum_probs=284.3
Q ss_pred ccCCcccccC--CCccceEEEEEeCCCCcccCccccchHHHHHHHHHhhccccccCeeec--------C--ceeeecCCC
Q 047399 26 YQFSHLDQIG--PPVYISLLYFYHLDDHKLVSNNHLFSNSLKSSLSNVLTKYYPLAGRIK--------N--NYVDCNDEG 93 (399)
Q Consensus 26 ~~Ls~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--------~--~~i~~~~~g 93 (399)
++||.|||+. ++.|++.++||+.++. .+..+. +++||+||+++|++||||||||+ + ++|.|++++
T Consensus 5 ~~Ls~lD~~~~~~~~y~~~~~~y~~~~~--~~~~~~-~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~ 81 (451)
T 2rkv_A 5 IQLDTLGQLPGLLSIYTQISLLYPVSDS--SQYPTI-VSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDV 81 (451)
T ss_dssp EECCGGGGCTTGGGCEEEEEEEEECSCG--GGHHHH-HHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSS
T ss_pred ccCChhhcCccccccceeEEEEEECCCC--CCHHHH-HHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCC
Confidence 6899999997 6899999999996432 133456 89999999999999999999986 1 678887777
Q ss_pred eeEEEEecC-C----------------------CCC-----C---------CCceEEEEEEEecCCcEEEEEeecceecc
Q 047399 94 VVFSEAKEK-D----------------------VVS-----V---------DGLAIAIQVNIFNCGNVAIAVMISHRIED 136 (399)
Q Consensus 94 v~f~~a~~~-d----------------------~l~-----P---------~~P~l~vQvt~~~cgG~~lg~~~~H~v~D 136 (399)
+.|++++++ | .+. | +.|++.+|||++ |||++||+++||.++|
T Consensus 82 ~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~~-~GG~~lg~~~~H~v~D 160 (451)
T 2rkv_A 82 PRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFI-KGGLILTVNGQHGAMD 160 (451)
T ss_dssp CEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEEE-BTEEEEEEEEETTTCC
T ss_pred CeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEEe-cCceeeeeeehhcccc
Confidence 668877653 1 011 1 279999999965 7999999999999999
Q ss_pred hhhHHHHHHHHHHHhcCCCCC----CCCccccccccCCC--CCCC-------CCCCC----CCCCCCceEEEEEEECHHH
Q 047399 137 GSSLITFTKTWAAVARGESEN----ILPEFVAAKLFPPK--DAGG-------SSGTS----FDPRPKKVVLKKFLFEGSK 199 (399)
Q Consensus 137 g~~~~~fl~~wa~~~rg~~~~----~~P~~dr~~l~~~~--~~p~-------~~p~~----~~~~~~~~~~~~f~~~~~~ 199 (399)
|.|+.+|+++||++|||.... ..|++||+.+.|.. ..|. +.+.. ......+++.++|+|++++
T Consensus 161 g~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~ 240 (451)
T 2rkv_A 161 MVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKA 240 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHH
Confidence 999999999999999996532 25788887655431 1221 11100 0112356789999999999
Q ss_pred HHHHHHHhcCCC---CCCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccccCCCCCCCCccchhhhhhheec
Q 047399 200 ITTLRDKYGLDN---LIYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKRMEPQLPADSFGNLFAFAVTILE 276 (399)
Q Consensus 200 i~~Lk~~~~~~~---~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~ 276 (399)
|++||+++.++. ..++|+||+|+||+|||+++||....++++++++.++||+|+|++ +|.+||||++..+.+.++
T Consensus 241 i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~ 318 (451)
T 2rkv_A 241 MSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNST 318 (451)
T ss_dssp HHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEEE
T ss_pred HHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEEecccccCC--CCCCCcccceeeecccCc
Confidence 999999997653 367999999999999999999821123468999999999999998 899999999999888877
Q ss_pred c-cc---c-HHHHHHHHHHHHhhhHHH-HHhhhhhHHHHHHHHHhcCCcc--c--cCCCCeEEEeccCCCCCcccccc--
Q 047399 277 E-NH---D-NRMVNKFRDAIGKIDKDY-LKAKNVEHSELIDLAITNGERF--D--KVELGYCIISSLCKFPVYEADFG-- 344 (399)
Q Consensus 277 ~-~~---~-~~~A~~ir~ai~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~tsw~~~~~y~~DFG-- 344 (399)
+ ++ + +++|..||+++.++++++ +++ +.++++.. .+...+ . ......+.+|||+++++|++|||
T Consensus 319 ~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ssw~~~~~y~~DFG~g 393 (451)
T 2rkv_A 319 IGEIANESLGATASRLRSELDPASMRQRTRG----LATYLHNN-PDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLG 393 (451)
T ss_dssp HHHHHHSCHHHHHHHHHTTCCHHHHHHHHHH----HHHHHHHC-SCCTTBCTTTTCCTTTCEEEEECTTCCGGGCCTTCS
T ss_pred HHHhccchHHHHHHHHHHHhcccCchhHHHH----HHHHHhcC-CCccccccccccCCCCCEEEeccccCCccccccCCC
Confidence 7 54 5 999999999999999888 887 44344321 111111 1 01123499999999999999998
Q ss_pred CCcceeeeecccC-CCcEEEEeecCCCCcEEEEEeCCHHHHHHhhcCHhhhhccCC
Q 047399 345 LGKPISVAWGCFP-YKNVIHFMDTKSGDGIEVWVHLEEEVMAIFENDQELLAYVST 399 (399)
Q Consensus 345 ~G~P~~v~~~~~~-~~g~~~i~p~~~~~g~ev~v~L~~~~m~~l~~d~~~~~~~~~ 399 (399)
||+|++++.+... .+|+++++|+.++||++|.|+|++++|++|++|+||++|+++
T Consensus 394 wG~P~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~~ 449 (451)
T 2rkv_A 394 LGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQY 449 (451)
T ss_dssp SCSCSEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHHHHTTCEE
T ss_pred CCCceEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHHHHhhhee
Confidence 8999999866533 578999998766678999999999999999999999999863
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.96 E-value=1e-07 Score=93.33 Aligned_cols=250 Identities=12% Similarity=0.104 Sum_probs=150.1
Q ss_pred CcccCCcccccC--CCccceEEEEEeCCCCcccCccccchHHHHHHHHHhhccccccCeeec--C---ceeeecCCC---
Q 047399 24 RHYQFSHLDQIG--PPVYISLLYFYHLDDHKLVSNNHLFSNSLKSSLSNVLTKYYPLAGRIK--N---NYVDCNDEG--- 93 (399)
Q Consensus 24 ~~~~Ls~lD~~~--~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--~---~~i~~~~~g--- 93 (399)
..+|||++.+.+ ...++...+-++.+-+ .++|++++.+++..+|.|-.++. + ..+......
T Consensus 6 ~~~pls~~Q~~~~~~~y~~~~~~~l~g~ld---------~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~ 76 (422)
T 1q9j_A 6 VIRKLSHSEEVFAQYEVFTSMTIQLRGVID---------VDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSG 76 (422)
T ss_dssp EEEECCHHHHHHHHTTCEEEEEEEEESCCC---------HHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCC
T ss_pred eeecCCHHHHHHHhcCceEEEEEEEecCCC---------HHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCc
Confidence 468999988753 2333444444444333 89999999999999999999986 1 222222211
Q ss_pred eeEEEEecC----CC------CCCCCceEEEEEEEecCCcEEEEEeecceecchhhHHHHHHHHHHHhc-----CCCCCC
Q 047399 94 VVFSEAKEK----DV------VSVDGLAIAIQVNIFNCGNVAIAVMISHRIEDGSSLITFTKTWAAVAR-----GESENI 158 (399)
Q Consensus 94 v~f~~a~~~----d~------l~P~~P~l~vQvt~~~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r-----g~~~~~ 158 (399)
+.++..... .+ +.-..|++.+.+.. ..++..|.+.+||.++||.|+..|++.+.+.++ |.....
T Consensus 77 ~~~~d~~~~~~~~~~~~~~~~~d~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~~ 155 (422)
T 1q9j_A 77 ICVIDGTAATNGSPSGNAELRLDQSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPI 155 (422)
T ss_dssp CEEEC------------CCCCCCTTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCCC
T ss_pred eEEEECCCCCcchhhhcccCccCCCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCCC
Confidence 222222111 01 11267888888877 778899999999999999999999999999887 332211
Q ss_pred C--Cccc--------ccccc---C---C--CC-----CC-CCC-CCC-CCCCCCceEEEEEEECHHHHHHHHHHhcCCCC
Q 047399 159 L--PEFV--------AAKLF---P---P--KD-----AG-GSS-GTS-FDPRPKKVVLKKFLFEGSKITTLRDKYGLDNL 212 (399)
Q Consensus 159 ~--P~~d--------r~~l~---~---~--~~-----~p-~~~-p~~-~~~~~~~~~~~~f~~~~~~i~~Lk~~~~~~~~ 212 (399)
+ +.-+ +.... + . ++ ++ ... |.. +...........+.++.+..++|++.|..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~--- 232 (422)
T 1q9j_A 156 TPQPTPLSMEAVLAQRGIRKQGLSGAERFMSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMAFGRE--- 232 (422)
T ss_dssp CCCCCCBCHHHHHHHSSCCC-----CTTSSTTTTCC-------------CCSBCCCCEEEECCCHHHHHHHHHHHTT---
T ss_pred CCCCCCCCHHHHHHhcCCcccccchhhhhhhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHHHHHHHHHH---
Confidence 1 1111 00000 0 0 00 01 000 100 01111223567888999999999999975
Q ss_pred CCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccccCCCCC----CCCccchhhhhhheecc--ccc-HHHHH
Q 047399 213 IYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKRMEPQLP----ADSFGNLFAFAVTILEE--NHD-NRMVN 285 (399)
Q Consensus 213 ~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp----~~Y~GN~~~~~~~~~~~--~~~-~~~A~ 285 (399)
..+|.+.++.|.+-..+.+-+... .....+..++++|....|+++ .+.+|..+ ..++. +.. .+++.
T Consensus 233 ~~~t~~~~l~aa~~~~l~r~~~~~---~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~----n~lp~~~~~~~~~~l~ 305 (422)
T 1q9j_A 233 HRLSLNAVVAAAILLTEWQLRNTP---HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAAS----YLAEIGPNTDIVDLAS 305 (422)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHTCS---SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEE----EEECCCSSCCHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHHhcccCC---CceEEEeeeeecccccCCCCChhhhhhhheeee----eeeeccCCCCHHHHHH
Confidence 358999999988776666542221 367889999999998765443 23444443 22333 334 66666
Q ss_pred HHHHHHHh
Q 047399 286 KFRDAIGK 293 (399)
Q Consensus 286 ~ir~ai~~ 293 (399)
.+++.+.+
T Consensus 306 ~v~~~~~~ 313 (422)
T 1q9j_A 306 DIVATLRA 313 (422)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666654
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.61 E-value=8.9e-06 Score=81.95 Aligned_cols=249 Identities=11% Similarity=0.047 Sum_probs=152.7
Q ss_pred CcccCCccccc-------CC--Ccc-ceEEEEEeCCCCcccCccccchHHHHHHHHHhhccccccCeeec--C---ceee
Q 047399 24 RHYQFSHLDQI-------GP--PVY-ISLLYFYHLDDHKLVSNNHLFSNSLKSSLSNVLTKYYPLAGRIK--N---NYVD 88 (399)
Q Consensus 24 ~~~~Ls~lD~~-------~~--~~y-~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--~---~~i~ 88 (399)
..+|||+.-+. .+ ..| +...+-++..-+ .++|++++.+++..++.|--++. + ..+.
T Consensus 95 ~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~ld---------~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v 165 (520)
T 2jgp_A 95 AYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGKLE---------RTRVEAAFQRLIARHESLRTSFAVVNGEPVQNI 165 (520)
T ss_dssp SSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEECCC---------HHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCCCC---------HHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEE
Confidence 56899976441 11 233 445555554443 89999999999999999998876 2 1121
Q ss_pred ecCC--CeeEEEEecC-------CCCCC----CCceEEEEEEEecCCcEEEEEeecceecchhhHHHHHHHHHHHhcCCC
Q 047399 89 CNDE--GVVFSEAKEK-------DVVSV----DGLAIAIQVNIFNCGNVAIAVMISHRIEDGSSLITFTKTWAAVARGES 155 (399)
Q Consensus 89 ~~~~--gv~f~~a~~~-------d~l~P----~~P~l~vQvt~~~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~ 155 (399)
.... .+.+.....+ +..+| ..|++.+.+.....+...|-+.+||.++||.|+..|++.+.+.++|..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~ 245 (520)
T 2jgp_A 166 HEDVPFALAYSEVTEEEARELVSSLVQPFDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDV 245 (520)
T ss_dssp CSCCCCCCEEEECCHHHHHHHHHHTCCCCCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCC
T ss_pred CCCCCCceEEEeCCHHHHHHHHHHhcCCCCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCC
Confidence 1111 2222222111 11123 588888888777657789999999999999999999999999999863
Q ss_pred CCCCC-cc-c-----cc----------------cccC--C-CCCCCCCCCCCCCCCCceEEEEEEECHHHHHHHHHHhcC
Q 047399 156 ENILP-EF-V-----AA----------------KLFP--P-KDAGGSSGTSFDPRPKKVVLKKFLFEGSKITTLRDKYGL 209 (399)
Q Consensus 156 ~~~~P-~~-d-----r~----------------~l~~--~-~~~p~~~p~~~~~~~~~~~~~~f~~~~~~i~~Lk~~~~~ 209 (399)
....| .+ | +. .+.. + ..+|...+. +...........+.++.+..++|++.+..
T Consensus 246 l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~~~~~~~lp~~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~a~~ 324 (520)
T 2jgp_A 246 LPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFADDIPVLNLPTDFTR-PSTQSFAGDQCTIGAGKALTEGLHQLAQA 324 (520)
T ss_dssp CCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSSCCCCCCCCCSSCC-CSSCCCBEEEEEEECCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCCCCCcCCCCCCCCC-CCCCCCCccEEEEeCCHHHHHHHHHHHHH
Confidence 21112 11 0 10 0110 0 011111111 11122344567889999999999998875
Q ss_pred CCCCCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccccCCCCCCCCccchhhhhhheecc--ccc-HHHHHH
Q 047399 210 DNLIYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKRMEPQLPADSFGNLFAFAVTILEE--NHD-NRMVNK 286 (399)
Q Consensus 210 ~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~--~~~-~~~A~~ 286 (399)
..+|.+.++.|.+-..+.+-.+ .+...+..++++|..- --.+-+|+++......... +.. .+++..
T Consensus 325 ---~~~T~~~~l~aa~a~~L~~~~~-----~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~~~~~l~~ 393 (520)
T 2jgp_A 325 ---TGTTLYMVLLAAYNVLLAKYAG-----QEDIIVGTPITGRSHA---DLEPIVGMFVNTLAMRNKPQREKTFSEFLQE 393 (520)
T ss_dssp ---HTCCHHHHHHHHHHHHHHHHHT-----CSCEEEEEEECCCCSG---GGTTCCSCCCEEEEEEECCCTTSBHHHHHHH
T ss_pred ---cCCCHHHHHHHHHHHHHHHhcC-----CCCeEEEeccCCCCch---hhhccEEeeeeeeeEEecCCCCCCHHHHHHH
Confidence 3478899988876666655433 2578999999999752 2235666665544444433 223 666666
Q ss_pred HHHHHHh
Q 047399 287 FRDAIGK 293 (399)
Q Consensus 287 ir~ai~~ 293 (399)
+++.+.+
T Consensus 394 v~~~~~~ 400 (520)
T 2jgp_A 394 VKQNALD 400 (520)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666544
No 8
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.45 E-value=4.5e-05 Score=75.44 Aligned_cols=254 Identities=11% Similarity=0.022 Sum_probs=151.8
Q ss_pred CcccCCccccc-----CC--CccceEEEEEeCCCCcccCccccchHHHHHHHHHhhccccccCeeecC----c-eeeec-
Q 047399 24 RHYQFSHLDQI-----GP--PVYISLLYFYHLDDHKLVSNNHLFSNSLKSSLSNVLTKYYPLAGRIKN----N-YVDCN- 90 (399)
Q Consensus 24 ~~~~Ls~lD~~-----~~--~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~~----~-~i~~~- 90 (399)
..+|||+..++ .+ ..|. ..+.|+.... .. .++|+++|.+++..++.|--++.. + .+...
T Consensus 16 ~~~pls~~Q~~~~~~~~~~~~~y~-~~~~~~l~g~------ld-~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~ 87 (466)
T 2xhg_A 16 GNVPLTPIQKWFFGKNFTNTGHWN-QSSVLYRPEG------FD-PKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGL 87 (466)
T ss_dssp EECCCCHHHHHHHHTTCTTTTCBE-EEEEEEETTC------CC-HHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCS
T ss_pred CCCCCCHHHHHHHhCCCCCcCcce-eEEEEEcCCC------CC-HHHHHHHHHHHHHhChHhheEEecCCCceeeecccc
Confidence 46899987552 22 2233 3344444332 22 899999999999999999988862 1 22211
Q ss_pred -CCCeeEEEEecC---C-----------CCCC----CCceEEEEEEEecCCcEEEEEeecceecchhhHHHHHHHHHHHh
Q 047399 91 -DEGVVFSEAKEK---D-----------VVSV----DGLAIAIQVNIFNCGNVAIAVMISHRIEDGSSLITFTKTWAAVA 151 (399)
Q Consensus 91 -~~gv~f~~a~~~---d-----------~l~P----~~P~l~vQvt~~~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~ 151 (399)
...+.+.+.+.. + .-+| ..|++.+.+.... ++-.|-+.+||.++||.|+..|++.+.+.+
T Consensus 88 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y 166 (466)
T 2xhg_A 88 GGQLYDFFSYNLTAQPDVQQAIEAETQRLHSSMNLQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRILFEDLATGY 166 (466)
T ss_dssp SSCCCEEEEEECTTCSCHHHHHHHHHHHHHTTCCTTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHHHHHHHHHH
T ss_pred ccccceeEEEecCCcccHHHHHHHHHHHHHhccCCCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHHHHHHHHHH
Confidence 122333332221 1 0113 5789988888877 455577999999999999999999999887
Q ss_pred c----CCCCCCCC---cc-c-----ccccc------------------CCCCCCCCCCCCCCCCCCceEEEEEEECHHHH
Q 047399 152 R----GESENILP---EF-V-----AAKLF------------------PPKDAGGSSGTSFDPRPKKVVLKKFLFEGSKI 200 (399)
Q Consensus 152 r----g~~~~~~P---~~-d-----r~~l~------------------~~~~~p~~~p~~~~~~~~~~~~~~f~~~~~~i 200 (399)
+ |.....+| .+ + +..+. ++..+|...+. +...........+.++.+..
T Consensus 167 ~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~~lp~~~~~-~~~~~~~~~~~~~~l~~~~~ 245 (466)
T 2xhg_A 167 AQALAGQAISLPEKTDSFQSWSQWLQEYANEADLLSEIPYWESLESQAKNVSLPKDYEV-TDCKQKSVRNMRIRLHPEET 245 (466)
T ss_dssp HHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHHHTTHHHHHHHHHHCCCCCCCCSSCC-SSCBGGGEEEEEEECCHHHH
T ss_pred HHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccchhhhHHHHHhhccCCcccCCccccc-cccccccceEEEEEcCHHHH
Confidence 5 33211111 11 0 00000 11111111111 11112344567889999999
Q ss_pred HHHHHHhcCCCCCCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccccCC-CCCCCCccchhhhhhheecc--
Q 047399 201 TTLRDKYGLDNLIYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKRMEP-QLPADSFGNLFAFAVTILEE-- 277 (399)
Q Consensus 201 ~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~rl~p-plp~~Y~GN~~~~~~~~~~~-- 277 (399)
++|++.+... ..+|.++++.|.+-..+.+-.+ .+...+.+++++|....+ +--.+-+|+.+.........
T Consensus 246 ~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~-----~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr~~~~~ 318 (466)
T 2xhg_A 246 EQLLKHANQA--YQTEINDLLLAALGLAFAEWSK-----LAQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVLLDLKQ 318 (466)
T ss_dssp HHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC-----CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEEEECSC
T ss_pred HHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC-----CCceEEEecCCCCCccccCCCccccccceeeeccEEEecCC
Confidence 9999877532 3478899888877666665433 256889999999976421 12345666665544444433
Q ss_pred ccc-HHHHHHHHHHHHhh
Q 047399 278 NHD-NRMVNKFRDAIGKI 294 (399)
Q Consensus 278 ~~~-~~~A~~ir~ai~~~ 294 (399)
+.. .+++..+++.+.++
T Consensus 319 ~~~~~~~l~~v~~~~~~~ 336 (466)
T 2xhg_A 319 TAPLSDYIKLTKENMRKI 336 (466)
T ss_dssp CCSHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHhC
Confidence 224 77888888877665
No 9
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.37 E-value=4.6e-05 Score=74.66 Aligned_cols=221 Identities=14% Similarity=0.090 Sum_probs=134.7
Q ss_pred hHHHHHHHHHhhccccccCeeecC-ceeeecCC--CeeEEEEecC--------CC-----CCC----CCceEEEEEEEec
Q 047399 61 SNSLKSSLSNVLTKYYPLAGRIKN-NYVDCNDE--GVVFSEAKEK--------DV-----VSV----DGLAIAIQVNIFN 120 (399)
Q Consensus 61 ~~~L~~sL~~~L~~~p~laGrl~~-~~i~~~~~--gv~f~~a~~~--------d~-----l~P----~~P~l~vQvt~~~ 120 (399)
.++|++++.+++..++.|--++.. -.+..... .+.++..... ++ -+| ..|++.+.+....
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~~~~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~ 114 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQGELYWHPFSPPIDYQDLSIHLEAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLS 114 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTTCCEEECSSCCCCEEEECTTCTTHHHHHHHHHHHHHTSCCCCBTSCSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHhheeEEEEEecCCeECCCcCCCccEEeCCCCCCHHHHHHHHHHHHhcCCCCcCCCCCeEEEEEEEc
Confidence 899999999999999999988862 11111111 1222222111 01 113 5688888887776
Q ss_pred CCcEEEEEeecceecchhhHHHHHHHHHHHhc----CCCCCCC-Cccc------cccccCC-------------CCCCC-
Q 047399 121 CGNVAIAVMISHRIEDGSSLITFTKTWAAVAR----GESENIL-PEFV------AAKLFPP-------------KDAGG- 175 (399)
Q Consensus 121 cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~-P~~d------r~~l~~~-------------~~~p~- 175 (399)
.+...|.+.+||.++||.|+..|++.+.+.+. |.....+ +.+. +..+... .+.|.
T Consensus 115 ~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~~ 194 (436)
T 1l5a_A 115 HSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQDKQFWQGYLREAPDL 194 (436)
T ss_dssp TTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHTSCCC
T ss_pred CCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHHHHHHHHHHHhcCCCCc
Confidence 58899999999999999999999999999987 4432111 1110 0000000 01111
Q ss_pred CC-CCCCCCCCCceEEEEEEECHHHHHHHHHHhcCCCCCCCChhhhHHHHHHHHHHhhccCCCCCCCceEEEEEeecccc
Q 047399 176 SS-GTSFDPRPKKVVLKKFLFEGSKITTLRDKYGLDNLIYPTRVEALSAFLWSRLAASTRIKVSPERPCMLVHAVNLRKR 254 (399)
Q Consensus 176 ~~-p~~~~~~~~~~~~~~f~~~~~~i~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~~~vd~R~r 254 (399)
.. |..............+.++.+..++|++.+.. ..+|.+.++.|.+-..+.+-.+ +...+..++++|..
T Consensus 195 ~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~L~~~~g------~dv~ig~~~~~R~~ 265 (436)
T 1l5a_A 195 TLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA---NQIGWPDALVALCALYLESAEP------DAPWLWLPFMNRWG 265 (436)
T ss_dssp CBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHST------TCCEEEEEECCCTT
T ss_pred ccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHhhC------CceEEeeecccCCC
Confidence 00 11011112234567889999999999998875 3588999988876555555422 46789999999964
Q ss_pred cCCCCCCCCccchhhhhhheecc--ccc-HHHHHHHHHHHHh
Q 047399 255 MEPQLPADSFGNLFAFAVTILEE--NHD-NRMVNKFRDAIGK 293 (399)
Q Consensus 255 l~pplp~~Y~GN~~~~~~~~~~~--~~~-~~~A~~ir~ai~~ 293 (399)
+--.+-+|+++......... +.. .+++..+++.+.+
T Consensus 266 ---~~~~~~vG~f~n~lplr~~~~~~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 266 ---SVAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp ---SGGGGSCSCCCEEEEEECCCCTTCBHHHHHHHHHHHHHH
T ss_pred ---hHHhcCcceEEEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 12345566655443333333 224 6677777776654
No 10
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.35 E-value=3.6e-05 Score=76.93 Aligned_cols=253 Identities=11% Similarity=0.014 Sum_probs=148.3
Q ss_pred CcccCCccccc-------CCCccceEEEEEeCCCCcccCccccchHHHHHHHHHhhccccccCeeec--C--ceeeecCC
Q 047399 24 RHYQFSHLDQI-------GPPVYISLLYFYHLDDHKLVSNNHLFSNSLKSSLSNVLTKYYPLAGRIK--N--NYVDCNDE 92 (399)
Q Consensus 24 ~~~~Ls~lD~~-------~~~~y~~~~~~f~~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~laGrl~--~--~~i~~~~~ 92 (399)
..+|||+.-+. .+.......+.|+.... -. .++|++++.+++..++.|--++. + +.+.....
T Consensus 12 ~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~------ld-~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~~v~~~~ 84 (493)
T 4hvm_A 12 GLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR------ID-DDRLAAAADEVLDAFPLLRVNFVDDDGLWMRTRENA 84 (493)
T ss_dssp CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS------CC-HHHHHHHHHHHHHHCGGGGEEEEESSSEEEEECSCC
T ss_pred CCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC------CC-HHHHHHHHHHHHHhchhceeEEEccCCEEEEecCCC
Confidence 46899987541 12111233444444332 12 89999999999999999998886 2 32222233
Q ss_pred CeeEEEEecC----------CC-----CCC----CCceEEEEEEEecCCcEEEEEeecceecchhhHHHHHHHHHHHhcC
Q 047399 93 GVVFSEAKEK----------DV-----VSV----DGLAIAIQVNIFNCGNVAIAVMISHRIEDGSSLITFTKTWAAVARG 153 (399)
Q Consensus 93 gv~f~~a~~~----------d~-----l~P----~~P~l~vQvt~~~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 153 (399)
+.+.+.+.. ++ -.| ..|++.+.+.....+...|.+.+||.++||.|+..|++.+.+.+.|
T Consensus 85 -~~~~~~d~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g 163 (493)
T 4hvm_A 85 -DALVRSDLRGHPDPQARCVELLRADRDRPTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYG 163 (493)
T ss_dssp -CCEEEEECTTSSSHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTT
T ss_pred -CCceEEECCCCCchHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCC
Confidence 444443322 01 113 5699988888777567899999999999999999999999999987
Q ss_pred CCCCCCCccc-----cc--cccCC-------------CCCCCCCCCCCCCCCCceEEEEEEECHHHHHHHHHHhcCCCCC
Q 047399 154 ESENILPEFV-----AA--KLFPP-------------KDAGGSSGTSFDPRPKKVVLKKFLFEGSKITTLRDKYGLDNLI 213 (399)
Q Consensus 154 ~~~~~~P~~d-----r~--~l~~~-------------~~~p~~~p~~~~~~~~~~~~~~f~~~~~~i~~Lk~~~~~~~~~ 213 (399)
.... .+..+ +. .+... .+.|... ..+.. ........+.++.+..++|++.|.. .
T Consensus 164 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~l~~~~~l~-~~~~~-~~~~~~~~~~l~~~~~~~l~~~a~~---~ 237 (493)
T 4hvm_A 164 RFRP-AQYRDFAEVADFHPLDRETVRVARHRWWSRRLPALPVRG-GDGGP-VGPPETSRLRVPGSRWQALTEPGGP---L 237 (493)
T ss_dssp CCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHHGGGSCCCC---------CCEEEEEEEEHHHHHHHHCC-------
T ss_pred CCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHhccCCCCCC-CCCCC-CCCCeeEEEEcCHHHHHHHHHHHHH---c
Confidence 6431 11111 11 00000 0111111 10111 1115677889999999999988875 3
Q ss_pred CCC--hhhhHHHHHHHHHHhhccCC-------CCCCCceEEEEEeecccccCCCCCCCCccchhhhhhheecc-c--c-c
Q 047399 214 YPT--RVEALSAFLWSRLAASTRIK-------VSPERPCMLVHAVNLRKRMEPQLPADSFGNLFAFAVTILEE-N--H-D 280 (399)
Q Consensus 214 ~~S--t~d~l~A~lW~~~~~ar~~~-------~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~-~--~-~ 280 (399)
.+| .+.++.|.+-..+.+-+... .+ .+...+..++++|..- --.+.+|+++......... . - .
T Consensus 238 ~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g-~~dv~~g~~~~gR~~~---~~~~~vG~f~n~lplr~~~~~~~~~t 313 (493)
T 4hvm_A 238 GGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTG-KDSLYLSTEVDLRDHL---QLGSVVGPLTDRVVFGVDLTGLREPS 313 (493)
T ss_dssp --CHHHHHHHHHHHHHHHC-----------------CEEEEEEEEEHHHHT---TCCSBCSCCEEEEEEEEECTTCSSCB
T ss_pred CCCchHHHHHHHHHHHHHHHhhhcccccccCcCC-CCCEEEEeeccCCCCc---chhcCeEeeeceeEEEEecCCCcCCC
Confidence 478 89988887655555441000 11 3678999999999652 3446677766554444443 3 2 3
Q ss_pred -HHHHHHHHHHHHhh
Q 047399 281 -NRMVNKFRDAIGKI 294 (399)
Q Consensus 281 -~~~A~~ir~ai~~~ 294 (399)
.+++..+++.+.+.
T Consensus 314 ~~~~l~~v~~~~~~~ 328 (493)
T 4hvm_A 314 FRDLMSRTQAGFLDA 328 (493)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 66777777766553
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.01 E-value=0.00041 Score=77.72 Aligned_cols=222 Identities=9% Similarity=0.003 Sum_probs=136.4
Q ss_pred hHHHHHHHHHhhccccccCeeecC------ceeeecCCCeeEEEEecC------------CCC-----CC----CCceEE
Q 047399 61 SNSLKSSLSNVLTKYYPLAGRIKN------NYVDCNDEGVVFSEAKEK------------DVV-----SV----DGLAIA 113 (399)
Q Consensus 61 ~~~L~~sL~~~L~~~p~laGrl~~------~~i~~~~~gv~f~~a~~~------------d~l-----~P----~~P~l~ 113 (399)
.++|++|+.+++.+++.|--++.. ..+......+.+.+.+.. +++ +| ..|++.
T Consensus 49 ~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r 128 (1304)
T 2vsq_A 49 IKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEIDLTHLTGSEQTAKINEYKEQDKIRGFDLTRDIPMR 128 (1304)
T ss_dssp HHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEEECTTSCHHHHHHHHHHHHHHHHHHCCCTTTSCSEE
T ss_pred HHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEEECCCCCchhHHHHHHHHHHHHhcCCCCCCCCCcEE
Confidence 899999999999999999988761 222222222223222211 011 13 579999
Q ss_pred EEEEEecCCcEEEEEeecceecchhhHHHHHHHHHHHhcC----CCCCCCC--cc-c-----cc------------ccc-
Q 047399 114 IQVNIFNCGNVAIAVMISHRIEDGSSLITFTKTWAAVARG----ESENILP--EF-V-----AA------------KLF- 168 (399)
Q Consensus 114 vQvt~~~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~~P--~~-d-----r~------------~l~- 168 (399)
+.+.....+...|-+.+||.++||.|+..|++.+++.+++ .....+| .+ | .+ .|.
T Consensus 129 ~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~~~~~yW~~~L~~ 208 (1304)
T 2vsq_A 129 AAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQASLRYWREYLEG 208 (1304)
T ss_dssp EEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHHHHHHHHHHHHTT
T ss_pred EEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhhHHHHHHHHHhCC
Confidence 8888877678899999999999999999999999998863 2211111 11 1 00 010
Q ss_pred --CCCCCCCCCCCCCCCCCCceEEEEEEECHHHHHHHHHHhcCCCCCCCChhhhHHHHHHHHHHhhccCCCCCCCceEEE
Q 047399 169 --PPKDAGGSSGTSFDPRPKKVVLKKFLFEGSKITTLRDKYGLDNLIYPTRVEALSAFLWSRLAASTRIKVSPERPCMLV 246 (399)
Q Consensus 169 --~~~~~p~~~p~~~~~~~~~~~~~~f~~~~~~i~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~~~~~~~~l~ 246 (399)
++..+|... . +...........+.++++..++||+.+.+. .+|.+.++.|.+-..+.|-.+ .+...+.
T Consensus 209 ~~~~~~lp~~~-~-~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~tg-----~~dvv~G 278 (1304)
T 2vsq_A 209 FEGQTTFAEQR-K-KQKDGYEPKELLFSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRYQQ-----SGDLAFG 278 (1304)
T ss_dssp CCCCCTTTTTC-C-CSSCCCCEEEEEECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHHT-----CSEEEEE
T ss_pred CCccccCCCCC-C-ccccccCcceEEEecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC-----CCCEEEE
Confidence 011111110 0 111123345677889999999999998763 478899888866555554432 2578999
Q ss_pred EEeecccccCCCCCCCCccchhhhhhheecc--ccc-HHHHHHHHHHHHh
Q 047399 247 HAVNLRKRMEPQLPADSFGNLFAFAVTILEE--NHD-NRMVNKFRDAIGK 293 (399)
Q Consensus 247 ~~vd~R~rl~pplp~~Y~GN~~~~~~~~~~~--~~~-~~~A~~ir~ai~~ 293 (399)
.++++|....+. -++-+|+.+.....+... +.+ .++...+++...+
T Consensus 279 ~pvsgR~~~~~~-~~~~vG~fvntlplr~~~~~~~s~~~ll~~v~~~~~~ 327 (1304)
T 2vsq_A 279 TVVSGRPAEIKG-VEHMVGLFINVVPRRVKLSEGITFNGLLKRLQEQSLQ 327 (1304)
T ss_dssp EEECCCCTTSTT-GGGCCSSCCEEEEEEEECCTTCBHHHHHHHHHHHHHH
T ss_pred EEeCCCCccchh-hhcccccceeEEEEEecCCCCCcHHHHHHHHHHHHHH
Confidence 999999653221 134555554443333333 224 6677777776644
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.25 E-value=0.0021 Score=64.61 Aligned_cols=217 Identities=11% Similarity=0.039 Sum_probs=126.1
Q ss_pred cccchHHHHHHHHHhhccccccCeeec-C----ceeeec---C-CCe------eEEEEecC----CC---C---------
Q 047399 57 NHLFSNSLKSSLSNVLTKYYPLAGRIK-N----NYVDCN---D-EGV------VFSEAKEK----DV---V--------- 105 (399)
Q Consensus 57 ~~~~~~~L~~sL~~~L~~~p~laGrl~-~----~~i~~~---~-~gv------~f~~a~~~----d~---l--------- 105 (399)
.+. .++||.|.-.+--++|-+|+++. | ....+. + +-+ -|++...+ |+ +
T Consensus 72 ~~l-~~~lr~AW~~lR~~hP~iA~~v~~d~~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~ 150 (519)
T 3fot_A 72 QNL-KEMFELALLDARFEHPECACTVSWDDEVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND 150 (519)
T ss_dssp HHH-HHHHHHHHHHHHHHCGGGGCEEECCSSSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-
T ss_pred HHH-HHHHHHHHHHHHhhCCcceeEEeeCCCCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc
Confidence 344 78888888888888999999987 2 122221 1 000 12222211 33 1
Q ss_pred CCCCceEEEEEEE--------ecCC--cEEEEEeecceecchhhHHHHHHHHHHHhcCCC----CCCCCccc----cccc
Q 047399 106 SVDGLAIAIQVNI--------FNCG--NVAIAVMISHRIEDGSSLITFTKTWAAVARGES----ENILPEFV----AAKL 167 (399)
Q Consensus 106 ~P~~P~l~vQvt~--------~~cg--G~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~----~~~~P~~d----r~~l 167 (399)
.|..+...+-+-. +. + -.-|.+.+||.++||.|...|++.+=+...... ....|.++ ...|
T Consensus 151 ~~p~~~~~l~~v~~~~~~~~~~p-~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L 229 (519)
T 3fot_A 151 NTPSKSIELFLLSDVSTDSTPIP-QDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNL 229 (519)
T ss_dssp CCCCCSCEEEEEESSSSTTSCCC-TTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGS
T ss_pred CCCccceEEEEEeccccccccCC-CCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccC
Confidence 1222332222211 23 3 577888999999999999999998877665211 11223332 1223
Q ss_pred cCCC----CCCCC--CCC-------------------C-CC-CCCCceEEEEEEECHHHHHHHHHHhcCCCCCCCChhhh
Q 047399 168 FPPK----DAGGS--SGT-------------------S-FD-PRPKKVVLKKFLFEGSKITTLRDKYGLDNLIYPTRVEA 220 (399)
Q Consensus 168 ~~~~----~~p~~--~p~-------------------~-~~-~~~~~~~~~~f~~~~~~i~~Lk~~~~~~~~~~~St~d~ 220 (399)
.|+- ..|.- .|. + +. ..+..-....+.|++++.++|++.|.+..++.+|-+.+
T Consensus 230 ~P~~e~~~~~p~~~~~~e~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~ 309 (519)
T 3fot_A 230 SPPVVDSLKLDINTLGSEFDDKCTEYTSALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHL 309 (519)
T ss_dssp CCCTGGGBSSCGGGCCHHHHHHHHHHHHHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHH
T ss_pred CcCHHHHhCCCCCCCCHHHHHHHHHHHHHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHH
Confidence 3321 11210 000 0 01 11123345678899999999999998754557999999
Q ss_pred HHHHHHHHHHhhccC-CCCCCCceEEEEEeecccccCCCCCCCCccchhhhhhhee
Q 047399 221 LSAFLWSRLAASTRI-KVSPERPCMLVHAVNLRKRMEPQLPADSFGNLFAFAVTIL 275 (399)
Q Consensus 221 l~A~lW~~~~~ar~~-~~~~~~~~~l~~~vd~R~rl~pplp~~Y~GN~~~~~~~~~ 275 (399)
|.|.+-.++.+.... .........+.++||+|+++.++...+|||.+........
T Consensus 310 l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 310 TQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp HHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred HHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeeeeeeeEe
Confidence 988776666664221 1111246789999999999976655578887776544433
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=71.29 E-value=2.9 Score=36.39 Aligned_cols=29 Identities=17% Similarity=0.399 Sum_probs=26.1
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhc
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVAR 152 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 152 (399)
+-|++++||.++||.-+..|++.+.+...
T Consensus 181 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 181 LPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 57889999999999999999999988764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=69.87 E-value=3.3 Score=36.20 Aligned_cols=28 Identities=32% Similarity=0.389 Sum_probs=25.0
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHh
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVA 151 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~ 151 (399)
+-|++++||.+.||.-+..|++.+.+..
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5788999999999999999999998753
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=69.60 E-value=3.3 Score=36.20 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=26.0
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhc
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVAR 152 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 152 (399)
+-|++++||.+.||.-+..|++.+.+...
T Consensus 185 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 185 MPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 67889999999999999999999987653
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=66.87 E-value=4 Score=36.18 Aligned_cols=29 Identities=14% Similarity=0.310 Sum_probs=26.9
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhc
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVAR 152 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 152 (399)
+-|+++++|.++||.-+..|++.+.+...
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999988764
No 17
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=66.57 E-value=3.5 Score=36.18 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=27.2
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhcC
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVARG 153 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 153 (399)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 448999999999999999999999988765
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=65.88 E-value=4.4 Score=35.81 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=27.0
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhcC
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVARG 153 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 153 (399)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 569999999999999999999999987754
No 19
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=65.72 E-value=4.4 Score=36.05 Aligned_cols=30 Identities=17% Similarity=0.345 Sum_probs=27.0
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhcC
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVARG 153 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 153 (399)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999987653
No 20
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=64.32 E-value=4.8 Score=36.25 Aligned_cols=29 Identities=24% Similarity=0.551 Sum_probs=26.4
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhc
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVAR 152 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~r 152 (399)
+-|+++++|.+.||.-...|++.+.+...
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 56899999999999999999999998765
No 21
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=59.68 E-value=24 Score=23.40 Aligned_cols=44 Identities=16% Similarity=0.202 Sum_probs=35.1
Q ss_pred ceEEEEEEECHHHHHHHHHHhcCCCCCCCChhhhHHHHHHHHHHhhccCCC
Q 047399 187 KVVLKKFLFEGSKITTLRDKYGLDNLIYPTRVEALSAFLWSRLAASTRIKV 237 (399)
Q Consensus 187 ~~~~~~f~~~~~~i~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~~ar~~~~ 237 (399)
+.....|+||.++-+.|.+.|.++ -|.+..+|=|.+.++.....
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~ykk 57 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTIIYKK 57 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHCSSC
T ss_pred cceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHhc
Confidence 455778999999999999999876 45578888888888865543
No 22
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=58.81 E-value=6.9 Score=35.06 Aligned_cols=30 Identities=30% Similarity=0.334 Sum_probs=27.4
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhcC
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVARG 153 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 153 (399)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998875
No 23
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=57.40 E-value=7.6 Score=34.66 Aligned_cols=30 Identities=17% Similarity=0.422 Sum_probs=27.1
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhcC
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVARG 153 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 153 (399)
+-|+++++|.+.||.-+..|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999988764
No 24
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=48.67 E-value=9.9 Score=20.10 Aligned_cols=18 Identities=39% Similarity=0.477 Sum_probs=15.1
Q ss_pred CCChhhhHHHHHHHHHHh
Q 047399 214 YPTRVEALSAFLWSRLAA 231 (399)
Q Consensus 214 ~~St~d~l~A~lW~~~~~ 231 (399)
-+++.|-|+-++|+++..
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 467899999999998763
No 25
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=47.20 E-value=27 Score=22.27 Aligned_cols=37 Identities=8% Similarity=0.170 Sum_probs=28.1
Q ss_pred EEEEEECHHHHHHHHHHhcCCCCCCCChhhhHHHHHHHHHHhhc
Q 047399 190 LKKFLFEGSKITTLRDKYGLDNLIYPTRVEALSAFLWSRLAAST 233 (399)
Q Consensus 190 ~~~f~~~~~~i~~Lk~~~~~~~~~~~St~d~l~A~lW~~~~~ar 233 (399)
...|+||.++-+.|++.|.++ -|.+..++=|.+.++.
T Consensus 3 ~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 3 AVSLYFSDEQYQKLEKMANEE-------EESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEECHHHHHHHHHHHHHT-------TSCTTHHHHHHHHHHH
T ss_pred eEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 567999999999999999875 3345566666666664
No 26
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=37.71 E-value=6.9 Score=37.91 Aligned_cols=30 Identities=17% Similarity=0.290 Sum_probs=0.0
Q ss_pred EEEEEeecceecchhhHHHHHHHHHHHhcC
Q 047399 124 VAIAVMISHRIEDGSSLITFTKTWAAVARG 153 (399)
Q Consensus 124 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 153 (399)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 358999999999999999999999877653
Done!