BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047402
(178 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q2L|A Chain A, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
pdb|2Q2L|B Chain B, Crystal Structure Of Superoxide Dismutase From P.
Atrosanguina
Length = 152
Score = 136 bits (343), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/133 (60%), Positives = 91/133 (68%), Gaps = 17/133 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGNTTN-----DPTLTVLDKNTVLQMMKNCHDCDLGN 111
G TTVTG+ SGLKPGLHGFHVHALG+TTN P K + H DLGN
Sbjct: 26 GPTTVTGNISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGSPEDETRHAGDLGN 85
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
V DD +VD QI L+GP+SIIGRAVVVH+DPD+LGK GGHELSK+TGNA
Sbjct: 86 ITVGDDGTACFTIVDKQIPLTGPHSIIGRAVVVHADPDDLGK------GGHELSKSTGNA 139
Query: 166 GGRVACGIIGIQG 178
GGR+ACGIIG+QG
Sbjct: 140 GGRIACGIIGLQG 152
>pdb|1SRD|A Chain A, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|B Chain B, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|C Chain C, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
pdb|1SRD|D Chain D, Three-Dimensional Structure Of Cu,Zn-Superoxide Dismutase
From Spinach At 2.0 Angstroms Resolution
Length = 154
Score = 105 bits (263), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 79/137 (57%), Gaps = 17/137 (12%)
Query: 51 LIMGDGGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCH 105
L D G TTV SGL PG HGFH+H G+TTN P K + H
Sbjct: 21 LTQEDDGPTTVNVRISGLAPGKHGFHLHEFGDTTNGCMSTGPHFNPDKKTHGAPEDEVRH 80
Query: 106 DCDLGNANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELS 159
DLGN D +VDNQI L+GPNS++GRA+VVH D+LGK GGHELS
Sbjct: 81 AGDLGNIVANTDGVAEATIVDNQIPLTGPNSVVGRALVVHELEDDLGK------GGHELS 134
Query: 160 KTTGNAGGRVACGIIGI 176
TTGNAGGR+ACG++G+
Sbjct: 135 PTTGNAGGRLACGVVGL 151
>pdb|3KM1|A Chain A, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM1|B Chain B, Zinc-Reconstituted Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|A Chain A, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|B Chain B, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|C Chain C, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|D Chain D, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|E Chain E, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|F Chain F, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|G Chain G, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|H Chain H, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|I Chain I, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|J Chain J, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|K Chain K, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|L Chain L, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|M Chain M, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|N Chain N, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|O Chain O, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|P Chain P, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|Q Chain Q, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|R Chain R, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|S Chain S, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|T Chain T, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|U Chain U, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|V Chain V, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|W Chain W, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3KM2|X Chain X, As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|A Chain A, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3MKG|B Chain B, Low Ph As-Isolated Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|A Chain A, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3PU7|B Chain B, Cu-Zn Tomato Chloroplast Superoxide Dismutase
pdb|3HOG|A Chain A, Metal-Free Tomato Chloroplast Superoxide Dismutase
pdb|3S0P|A Chain A, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|B Chain B, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|C Chain C, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|D Chain D, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|E Chain E, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|F Chain F, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|G Chain G, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
pdb|3S0P|H Chain H, Copper-Reconstituted Tomato Chloroplast Superoxide
Dismutase
Length = 154
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 81/133 (60%), Gaps = 17/133 (12%)
Query: 55 DGGQTTVTGSFSGLKPGLHGFHVHALGNTTND--PTLTVLDKNTVLQMM---KNCHDCDL 109
D G TTV +GL PGLHGFH+H G+TTN T + N + + H DL
Sbjct: 25 DDGPTTVNVRITGLAPGLHGFHLHEYGDTTNGCMSTGAHFNPNKLTHGAPGDEIRHAGDL 84
Query: 110 GNANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTG 163
GN D +VDNQI L+GPNS++GRA+VVH D+LGK GGHELS TTG
Sbjct: 85 GNIVANADGVAEVTLVDNQIPLTGPNSVVGRALVVHELEDDLGK------GGHELSLTTG 138
Query: 164 NAGGRVACGIIGI 176
NAGGR+ACG++G+
Sbjct: 139 NAGGRLACGVVGL 151
>pdb|3L9E|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|C Chain C, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9E|D Chain D, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
THE SILKWORM Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 75/130 (57%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLHGFHVHALGNTTNDPTLTVLDKNTVLQ-----MMKNCHDCDLGNAN 113
V+G GL G HGFHVH G+ TN T N Q H DLGN
Sbjct: 28 VVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIE 87
Query: 114 VRDD-------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
+D + D+QISL GPNSIIGR +VVH+DPD+LG GGHELSKTTGNAG
Sbjct: 88 AIEDSGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGL------GGHELSKTTGNAG 141
Query: 167 GRVACGIIGI 176
GR+ACG+IG+
Sbjct: 142 GRIACGVIGL 151
>pdb|3L9Y|A Chain A, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
pdb|3L9Y|B Chain B, Crystal Structures Of Holo And Cu-Deficient CuZNSOD FROM
The Silkworm Bombyx Mori And The Implications In
Amyotrophic Lateral Sclerosis
Length = 154
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 63/130 (48%), Positives = 75/130 (57%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLHGFHVHALGNTTNDPTLTVLDKNTVLQ-----MMKNCHDCDLGNAN 113
V+G GL G HGFHVH G+ TN T N Q H DLGN
Sbjct: 28 VVVSGEVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIE 87
Query: 114 VRDD-------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
+D + D+QISL GPNSIIGR +VVH+DPD+LG GG+ELSKTTGNAG
Sbjct: 88 AIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGL------GGNELSKTTGNAG 141
Query: 167 GRVACGIIGI 176
GR+ACG+IG+
Sbjct: 142 GRIACGVIGL 151
>pdb|3MND|A Chain A, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
pdb|3MND|B Chain B, Crystallographic Analysis Of The Cystosolic CuZN
SUPEROXIDE DISMUTASE From Taenia Solium
Length = 152
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/132 (47%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTNDPT-----LTVLDKNTVLQMMKNCHDCDLG 110
G V F GLKPG HGFHVH G+TT T KN H DLG
Sbjct: 23 GDAVKVHAEFEGLKPGKHGFHVHEFGDTTQGCTSAGAHFNPHGKNHGAPDAAERHVGDLG 82
Query: 111 NANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D + D ISL+G +S+IGR++V+H DPD+LG GGHELS TGN
Sbjct: 83 NVTAGADGKATLDLTDKMISLTGEHSVIGRSLVIHVDPDDLG------LGGHELSLITGN 136
Query: 165 AGGRVACGIIGI 176
AGGRVACGIIGI
Sbjct: 137 AGGRVACGIIGI 148
>pdb|3F7K|A Chain A, X-Ray Crystal Structure Of An Alvinella Pompejana Cu,Zn
Superoxide Dismutase- Hydrogen Peroxide Complex
pdb|3F7L|A Chain A, X-Ray Crystal Structure Of Alvinella Pompejana Cu,Zn
Superoxide Dismutase
Length = 152
Score = 98.2 bits (243), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 55 DGGQTTVTGSFSGLKPGLHGFHVHALGNTTNDPT-----LTVLDKNTVLQMMKNCHDCDL 109
+G TVTG +GL PG HGFHVH G+ TN T K +N H DL
Sbjct: 23 EGDMVTVTGEITGLTPGKHGFHVHEFGDNTNGCTSAGGHFNPHGKEHGAPEDENRHAGDL 82
Query: 110 GNANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTG 163
GN +D + D + L+GP+S+IGR +VVH D D+LG+ GGHE SK TG
Sbjct: 83 GNVVAGEDGKAVINMKDKLVKLTGPDSVIGRTLVVHVDEDDLGR------GGHEQSKITG 136
Query: 164 NAGGRVACGIIGI 176
NAGGR+ACG+IGI
Sbjct: 137 NAGGRLACGVIGI 149
>pdb|1TO4|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO4|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|A Chain A, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|B Chain B, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|C Chain C, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
pdb|1TO5|D Chain D, Structure Of The Cytosolic Cu,Zn Sod From S. Mansoni
Length = 156
Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 75/133 (56%), Gaps = 17/133 (12%)
Query: 55 DGGQTTVTGSFSGLKPGLHGFHVHALGNTTNDPTLTVLDKNTVLQMMKNCHDC-----DL 109
D G V FSGLK G HGFHVH G+TTN T N Q D DL
Sbjct: 27 DNGPVHVHAEFSGLKAGKHGFHVHEFGDTTNGCTSAGAHFNPTKQEHGAPEDSIRHVGDL 86
Query: 110 GNA------NVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTG 163
GN N + D ISL+G +SIIGR++V+H + D+LG+ GGHELSK TG
Sbjct: 87 GNVVAGADGNAVYNATDKLISLNGSHSIIGRSMVIHENEDDLGR------GGHELSKVTG 140
Query: 164 NAGGRVACGIIGI 176
NAGGR+ACG++G+
Sbjct: 141 NAGGRLACGVVGL 153
>pdb|3SOD|O Chain O, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|Y Chain Y, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|G Chain G, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
pdb|3SOD|B Chain B, Changes In Crystallographic Structure And Thermostability
Of A Cu,Zn Superoxide Dismutase Mutant Resulting From
The Removal Of Buried Cysteine
Length = 152
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T P L K + H DLG
Sbjct: 25 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLG 84
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 85 NVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 138
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 139 AGSRLACGVIGI 150
>pdb|1E9O|A Chain A, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T+ P L K + H DLG
Sbjct: 25 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLG 84
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 85 NVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 138
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 139 AGSRLACGVIGI 150
>pdb|1E9Q|A Chain A, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T+ P L K + H DLG
Sbjct: 24 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLG 83
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 84 NVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 137
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 138 AGSRLACGVIGI 149
>pdb|1Q0E|A Chain A, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|1Q0E|B Chain B, Atomic Resolution (1.15 ) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase
pdb|2SOD|O Chain O, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|Y Chain Y, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|B Chain B, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
pdb|2SOD|G Chain G, Determination And Analysis Of The 2 Angstrom Structure Of
Copper, Zinc Superoxide Dismutase
Length = 152
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T P L K + H DLG
Sbjct: 25 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLG 84
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 85 NVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 138
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 139 AGSRLACGVIGI 150
>pdb|1SDA|O Chain O, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|Y Chain Y, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|B Chain B, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
pdb|1SDA|G Chain G, Crystal Structure Of Peroxynitrite-Modified Bovine Cu,Zn
Superoxide Dismutase
Length = 152
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T P L K + H DLG
Sbjct: 25 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLG 84
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 85 NVTADKNGVAIVDIVDPLISLSGEXSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 138
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 139 AGSRLACGVIGI 150
>pdb|1COB|A Chain A, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1COB|B Chain B, Crystal Structure Solution And Refinement Of The
Semisynthetic Cobalt Substituted Bovine Erythrocyte
Enzyme Superoxide Dismutase At 2.0 Angstroms Resolution
pdb|1SXA|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXA|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXB|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|A Chain A, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXC|B Chain B, Crystal Structure Of Reduced Bovine Erythrocyte Superoxide
Dismutase At 1.9 Angstroms Resolution
pdb|1SXN|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXN|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0
pdb|1SXS|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXS|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Thiocyanate
pdb|1SXZ|A Chain A, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1SXZ|B Chain B, Reduced Bovine Superoxide Dismutase At Ph 5.0 Complexed
With Azide
pdb|1CBJ|A Chain A, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|1CBJ|B Chain B, Crystal Structure Of Bovine Superoxide Dismutase Crystal.
pdb|2AEO|A Chain A, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2AEO|B Chain B, Crystal Structure Of Cisplatinated Bovine Cu,Zn Superoxide
Dismutase
pdb|2Z7U|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7U|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7W|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Y|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2Z7Z|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|A Chain A, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|2ZOW|B Chain B, Crystal Structure Of H2o2 Treated Cu,Zn-Sod
pdb|3HW7|A Chain A, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
pdb|3HW7|B Chain B, High Pressure (0.57 Gpa) Crystal Structure Of Bovine
Copper, Zinc Superoxide Dismutase At 2.0 Angstroms
Length = 151
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T P L K + H DLG
Sbjct: 24 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDEERHVGDLG 83
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 84 NVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 137
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 138 AGSRLACGVIGI 149
>pdb|1E9P|A Chain A, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T+ P L K + H DLG
Sbjct: 24 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPSDEERHVGDLG 83
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 84 NVTADSNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 137
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 138 AGSRLACGVIGI 149
>pdb|1E9Q|B Chain B, Crystal Structure Of Bovine Cu Zn Sod-(1 Of 3)
Length = 151
Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T P L K H DLG
Sbjct: 24 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVGDLG 83
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S +TGN
Sbjct: 84 NVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTSTGN 137
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 138 AGSRLACGVIGI 149
>pdb|1E9P|B Chain B, Crystal Structure Of Bovine Cu, Zn Sod To 1.7 Angstrom (3
Of 3)
Length = 151
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T+ P L K H DLG
Sbjct: 24 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPSDDERHVGDLG 83
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S +TGN
Sbjct: 84 NVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTSTGN 137
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 138 AGSRLACGVIGI 149
>pdb|1E9O|B Chain B, Crystal Structure Of Bovine Sod - 1 Of 3
Length = 152
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T P L K H DLG
Sbjct: 25 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVGDLG 84
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S +TGN
Sbjct: 85 NVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTSTGN 138
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 139 AGSRLACGVIGI 150
>pdb|1CB4|A Chain A, Crystal Structure Of Copper, Zinc Superoxide Dismutase
pdb|1CB4|B Chain B, Crystal Structure Of Copper, Zinc Superoxide Dismutase
Length = 151
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/132 (45%), Positives = 69/132 (52%), Gaps = 17/132 (12%)
Query: 56 GGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLG 110
G VTGS +GL G HGFHVH G+ T P L K H DLG
Sbjct: 24 GDTVVVTGSITGLTEGDHGFHVHQFGDNTQGCTSAGPHFNPLSKKHGGPKDDERHVGDLG 83
Query: 111 NANVRD------DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N D+VD ISLSG SIIGR +VVH PD+LG+ GG+E S TGN
Sbjct: 84 NVTADKNGVAIVDIVDPLISLSGEYSIIGRTMVVHEKPDDLGR------GGNEESTKTGN 137
Query: 165 AGGRVACGIIGI 176
AG R+ACG+IGI
Sbjct: 138 AGSRLACGVIGI 149
>pdb|1FUN|A Chain A, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|F Chain F, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|B Chain B, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|G Chain G, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|C Chain C, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|H Chain H, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|D Chain D, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|I Chain I, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|E Chain E, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
pdb|1FUN|J Chain J, Superoxide Dismutase Mutant With Lys 136 Replaced By Glu,
Cys 6 Replaced By Ala And Cys 111 Replaced By Ser
(K136e, C6a, C111s)
Length = 153
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTETGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1SOS|A Chain A, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|F Chain F, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|B Chain B, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|G Chain G, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|C Chain C, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|H Chain H, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|D Chain D, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|I Chain I, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|E Chain E, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
pdb|1SOS|J Chain J, Atomic Structures Of Wild-type And Thermostable Mutant
Recombinant Human Cu, Zn Superoxide Dismutase
Length = 154
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|1L3N|A Chain A, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|1L3N|B Chain B, The Solution Structure Of Reduced Dimeric Copper Zinc Sod:
The Structural Effects Of Dimerization
pdb|2AF2|A Chain A, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2AF2|B Chain B, Solution Structure Of Disulfide Reduced And Copper
Depleted Human Superoxide Dismutase
pdb|2LU5|A Chain A, Structure And Chemical Shifts Of Cu(I),Zn(Ii) Superoxide
Dismutase By Solid-State Nmr
Length = 153
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1N18|A Chain A, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|B Chain B, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|C Chain C, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|D Chain D, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|E Chain E, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|F Chain F, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|G Chain G, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|H Chain H, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|I Chain I, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
pdb|1N18|J Chain J, Thermostable Mutant Of Human Superoxide Dismutase, C6a,
C111s
Length = 154
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|1N19|A Chain A, Structure Of The Hsod A4v Mutant
pdb|1N19|B Chain B, Structure Of The Hsod A4v Mutant
Length = 154
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|1XSO|A Chain A, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
pdb|1XSO|B Chain B, Three-Dimensional Structure Of Xenopus Laevis Cu,Zn
Superoxide Dismutase B Determined By X-Ray
Crystallography At 1.5 Angstroms Resolution
Length = 150
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 69/132 (52%), Gaps = 16/132 (12%)
Query: 55 DGGQTTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDL 109
D G +V G GL GLHGFH+H G+ TN +KN + H DL
Sbjct: 23 DEGAVSVEGKIEGLTDGLHGFHIHVFGDNTNGCMSAGSHFNPENKNHGAPGDTDRHVGDL 82
Query: 110 GNANVRDDVV-----DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
GN V D+ ISL GPNSIIGR VVH D+LGK GG++ S TGN
Sbjct: 83 GNVTAEGGVAQFKITDSLISLKGPNSIIGRTAVVHEKADDLGK------GGNDESLKTGN 136
Query: 165 AGGRVACGIIGI 176
AGGR+ACG+IG
Sbjct: 137 AGGRLACGVIGY 148
>pdb|3GTV|A Chain A, Human-Mouse Sod1 Chimera
pdb|3GTV|B Chain B, Human-Mouse Sod1 Chimera
pdb|3GTV|C Chain C, Human-Mouse Sod1 Chimera
pdb|3GTV|D Chain D, Human-Mouse Sod1 Chimera
pdb|3GTV|E Chain E, Human-Mouse Sod1 Chimera
pdb|3GTV|F Chain F, Human-Mouse Sod1 Chimera
pdb|3GTV|G Chain G, Human-Mouse Sod1 Chimera
pdb|3GTV|H Chain H, Human-Mouse Sod1 Chimera
pdb|3GTV|I Chain I, Human-Mouse Sod1 Chimera
pdb|3GTV|J Chain J, Human-Mouse Sod1 Chimera
pdb|3GTV|K Chain K, Human-Mouse Sod1 Chimera
pdb|3GTV|L Chain L, Human-Mouse Sod1 Chimera
Length = 153
Score = 86.7 bits (213), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTAGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2WKO|F Chain F, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 86.3 bits (212), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D V D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDAVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|2GBT|A Chain A, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|B Chain B, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|C Chain C, C6aC111A CUZN SUPEROXIDE DISMUTASE
pdb|2GBT|D Chain D, C6aC111A CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 70/131 (53%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG ++IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3GZP|A Chain A, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|B Chain B, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|C Chain C, Human Sod1 G93a Metal-Free Variant
pdb|3GZP|D Chain D, Human Sod1 G93a Metal-Free Variant
pdb|2WZ6|A Chain A, G93a Sod1 Mutant Complexed With Quinazoline.
pdb|2WZ6|F Chain F, G93a Sod1 Mutant Complexed With Quinazoline
Length = 153
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D V D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3GZO|A Chain A, Human Sod1 G93a Variant
pdb|3GZO|B Chain B, Human Sod1 G93a Variant
pdb|3GZO|C Chain C, Human Sod1 G93a Variant
pdb|3GZO|D Chain D, Human Sod1 G93a Variant
pdb|3GZO|E Chain E, Human Sod1 G93a Variant
pdb|3GZO|F Chain F, Human Sod1 G93a Variant
pdb|3GZO|G Chain G, Human Sod1 G93a Variant
pdb|3GZO|H Chain H, Human Sod1 G93a Variant
pdb|3GZO|I Chain I, Human Sod1 G93a Variant
pdb|3GZO|J Chain J, Human Sod1 G93a Variant
pdb|2WKO|A Chain A, Structure Of Metal Loaded Pathogenic Sod1 Mutant G93a
Length = 154
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D V D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|2ZKY|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|E Chain E, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|F Chain F, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|G Chain G, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|H Chain H, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|I Chain I, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
pdb|2ZKY|J Chain J, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G93a
Length = 159
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 33 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 92
Query: 112 ANVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D V D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 93 VTADKDAVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 146
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 147 GSRLACGVIGI 157
>pdb|2E47|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
pdb|2E47|B Chain B, Crystal Structure Analysis Of The Clock Protein Ea4
(Glycosylation Form)
Length = 156
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 83/162 (51%), Gaps = 28/162 (17%)
Query: 33 FSLPSSGVTEIATNRSDDLIMGD-------GGQTTVTGSFSGLKPGLHGFHVHALGNTT- 84
F+ PS + ++T + I G+ G+ V G +GL PG +GFHVH G+ +
Sbjct: 4 FTTPSRAIAVLST----ETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSG 59
Query: 85 ----NDPTLTVLDKNTVLQMMKNCHDCDLGNANV------RDDVVDNQISLSGPNSIIGR 134
K+ N H DLGN R D+VD+QISLSGP+ IIGR
Sbjct: 60 GCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGR 119
Query: 135 AVVVHSDPDNLGKECSSPSGGHELSKTTGNAGGRVACGIIGI 176
AVV+H D+ GK H S+ TGNAGGRVACG+IGI
Sbjct: 120 AVVLHEKADDYGKS------DHPDSRKTGNAGGRVACGVIGI 155
>pdb|2E46|A Chain A, Crystal Structure Analysis Of The Clock Protein Ea4
Length = 157
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/162 (39%), Positives = 83/162 (51%), Gaps = 28/162 (17%)
Query: 33 FSLPSSGVTEIATNRSDDLIMGD-------GGQTTVTGSFSGLKPGLHGFHVHALGNTT- 84
F+ PS + ++T + I G+ G+ V G +GL PG +GFHVH G+ +
Sbjct: 5 FTTPSRAIAVLST----ETIRGNITFTQVQDGKVHVQGGITGLPPGEYGFHVHEKGDLSG 60
Query: 85 ----NDPTLTVLDKNTVLQMMKNCHDCDLGNANV------RDDVVDNQISLSGPNSIIGR 134
K+ N H DLGN R D+VD+QISLSGP+ IIGR
Sbjct: 61 GCLSTGSHFNPEHKDHGHPNDVNRHVGDLGNVVFDENHYSRIDLVDDQISLSGPHGIIGR 120
Query: 135 AVVVHSDPDNLGKECSSPSGGHELSKTTGNAGGRVACGIIGI 176
AVV+H D+ GK H S+ TGNAGGRVACG+IGI
Sbjct: 121 AVVLHEKADDYGKS------DHPDSRKTGNAGGRVACGVIGI 156
>pdb|2C9S|A Chain A, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|2C9S|F Chain F, 1.24 Angstroms Resolution Structure Of Zn-Zn Human
Superoxide Dismutase
pdb|3T5W|A Chain A, 2me Modified Human Sod1
pdb|3T5W|B Chain B, 2me Modified Human Sod1
pdb|3T5W|D Chain D, 2me Modified Human Sod1
pdb|3T5W|E Chain E, 2me Modified Human Sod1
pdb|3T5W|F Chain F, 2me Modified Human Sod1
pdb|3T5W|G Chain G, 2me Modified Human Sod1
pdb|3T5W|H Chain H, 2me Modified Human Sod1
pdb|3T5W|I Chain I, 2me Modified Human Sod1
pdb|3T5W|J Chain J, 2me Modified Human Sod1
pdb|3T5W|K Chain K, 2me Modified Human Sod1
pdb|3T5W|L Chain L, 2me Modified Human Sod1
pdb|3T5W|M Chain M, 2me Modified Human Sod1
Length = 153
Score = 85.1 bits (209), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1P1V|A Chain A, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|B Chain B, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
pdb|1P1V|C Chain C, Crystal Structure Of Fals-Associated Human Copper-Zinc
Superoxide Dismutase (Cuznsod) Mutant D125h To 1.4a
Length = 153
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADHLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1MFM|A Chain A, Monomeric Human Sod Mutant F50eG51EE133Q AT ATOMIC
Resolution
pdb|1KMG|A Chain A, The Solution Structure Of Monomeric Copper-Free Superoxide
Dismutase
pdb|1RK7|A Chain A, Solution Structure Of Apo Cu,Zn Superoxide Dismutase: Role
Of Metal Ions In Protein Folding
Length = 153
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHA-----LGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEQSTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1BA9|A Chain A, The Solution Structure Of Reduced Monomeric Superoxide
Dismutase, Nmr, 36 Structures
Length = 153
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHA-----LGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEQSTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|4B3E|A Chain A, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|B Chain B, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|C Chain C, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|D Chain D, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|E Chain E, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|F Chain F, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|G Chain G, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|H Chain H, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|I Chain I, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate.
pdb|4B3E|J Chain J, Structure Of Copper-Zinc Superoxide Dismutase Complexed
With Bicarbonate
Length = 154
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|3ECW|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECW|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
T54r Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
Length = 153
Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNRAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1HL4|A Chain A, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|B Chain B, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|C Chain C, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL4|D Chain D, The Structure Of Apo Type Human Cu, Zn Superoxide
Dismutase
pdb|1SPD|A Chain A, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
pdb|1SPD|B Chain B, Amyotrophic Lateral Sclerosis And Structural Defects In
Cu,Zn Superoxide Dismutase
Length = 154
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|1HL5|A Chain A, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|B Chain B, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|C Chain C, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|D Chain D, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|E Chain E, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|F Chain F, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|G Chain G, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|H Chain H, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|I Chain I, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|J Chain J, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|K Chain K, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|L Chain L, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|M Chain M, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|N Chain N, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|O Chain O, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|P Chain P, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|Q Chain Q, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1HL5|S Chain S, The Structure Of Holo Type Human Cu, Zn Superoxide
Dismutase
pdb|1PU0|A Chain A, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|B Chain B, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|C Chain C, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|D Chain D, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|E Chain E, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|F Chain F, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|G Chain G, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|H Chain H, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|I Chain I, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|1PU0|J Chain J, Structure Of Human Cu,Zn Superoxide Dismutase
pdb|2C9U|A Chain A, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9U|F Chain F, 1.24 Angstroms Resolution Structure Of As-Isolated Cu-Zn
Human Superoxide Dismutase
pdb|2C9V|A Chain A, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2C9V|F Chain F, Atomic Resolution Structure Of Cu-Zn Human Superoxide
Dismutase
pdb|2V0A|A Chain A, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|2V0A|F Chain F, Atomic Resolution Crystal Structure Of Human Superoxide
Dismutase
pdb|3ECU|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3ECU|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1)
pdb|3KH3|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|G Chain G, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|H Chain H, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|I Chain I, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|J Chain J, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|K Chain K, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH3|L Chain L, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P212121
Crystal Form Containing 12 Chains In The Asymmetric Unit
pdb|3KH4|A Chain A, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|B Chain B, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|C Chain C, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|D Chain D, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|E Chain E, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3KH4|F Chain F, Crystal Structure Of Human CuZN SUPEROXIDE DISMUTASE
RECOMBINANTLY Produced In Leishmania Tarantolae; P6522
Crystal Form Containing 6 Chains In The Asymmetric Unit
pdb|3RE0|A Chain A, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|B Chain B, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|C Chain C, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
pdb|3RE0|D Chain D, Crystal Structure Of Human Apo Cu,Zn Superoxide Dismutase
(Sod1) Complexed With Cisplatin
Length = 153
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1UXM|A Chain A, A4v Mutant Of Human Sod1
pdb|1UXM|B Chain B, A4v Mutant Of Human Sod1
pdb|1UXM|C Chain C, A4v Mutant Of Human Sod1
pdb|1UXM|D Chain D, A4v Mutant Of Human Sod1
pdb|1UXM|E Chain E, A4v Mutant Of Human Sod1
pdb|1UXM|F Chain F, A4v Mutant Of Human Sod1
pdb|1UXM|G Chain G, A4v Mutant Of Human Sod1
pdb|1UXM|H Chain H, A4v Mutant Of Human Sod1
pdb|1UXM|I Chain I, A4v Mutant Of Human Sod1
pdb|1UXM|J Chain J, A4v Mutant Of Human Sod1
pdb|1UXM|K Chain K, A4v Mutant Of Human Sod1
pdb|1UXM|L Chain L, A4v Mutant Of Human Sod1
Length = 153
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3GZQ|A Chain A, Human Sod1 A4v Metal-Free Variant
pdb|3GZQ|B Chain B, Human Sod1 A4v Metal-Free Variant
Length = 154
Score = 84.3 bits (207), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|1PTZ|A Chain A, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
pdb|1PTZ|B Chain B, Crystal Structure Of The Human Cu, Zn Superoxide
Dismutase, Familial Amyotrophic Lateral Sclerosis (Fals)
Mutant H43r
Length = 153
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GL GFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLRGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3KBE|A Chain A, Metal-Free C. Elegans Cu,Zn Superoxide Dismutase
pdb|3KBF|A Chain A, C. Elegans Cu,Zn Superoxide Dismutase
Length = 157
Score = 84.3 bits (207), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 68/130 (52%), Gaps = 14/130 (10%)
Query: 58 QTTVTGSFSGLKPGLHGFHVHALGNTTN-----DPTLTVLDKNTVLQMMKNCHDCDLGNA 112
Q + G GL PGLHGFHVH G++TN P K + H DLGN
Sbjct: 27 QAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISAGPHFNPFGKTHGGPKSEIRHVGDLGNV 86
Query: 113 NVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
D + D ++L GPN+++GR++VVH+ D+LG+ + E SK TGNAG
Sbjct: 87 EAGADGVAKIKLTDTLVTLYGPNTVVGRSMVVHAGQDDLGEGVGDKA---EESKKTGNAG 143
Query: 167 GRVACGIIGI 176
R ACG+I +
Sbjct: 144 ARAACGVIAL 153
>pdb|2WYZ|A Chain A, L38v Sod1 Mutant Complexed With Ump
pdb|2WYZ|F Chain F, L38v Sod1 Mutant Complexed With Ump
Length = 153
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS G+ GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2XJK|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase
Length = 153
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHA-----LGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG ++IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2GBU|A Chain A, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|B Chain B, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|C Chain C, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBU|D Chain D, C6a/c111a/c57a/c146a Apo Cuzn Superoxide Dismutase
pdb|2GBV|A Chain A, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|B Chain B, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|C Chain C, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|D Chain D, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|E Chain E, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|F Chain F, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|G Chain G, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|H Chain H, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|I Chain I, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
pdb|2GBV|J Chain J, C6aC111AC57AC146A HOLO CUZN SUPEROXIDE DISMUTASE
Length = 153
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGATSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG ++IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+A G+IGI
Sbjct: 141 GSRLAAGVIGI 151
>pdb|1OZU|A Chain A, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
pdb|1OZU|B Chain B, Crystal Structure Of Familial Als Mutant S134n Of Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 1.3a Resolution
Length = 153
Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E + TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGK------GGNEENTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2WYT|A Chain A, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WYT|F Chain F, 1.0 A Resolution Structure Of L38v Sod1 Mutant
pdb|2WZ0|A Chain A, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ0|F Chain F, L38v Sod1 Mutant Complexed With Aniline.
pdb|2WZ5|A Chain A, L38v Sod1 Mutant Complexed With L-Methionine.
pdb|2WZ5|F Chain F, L38v Sod1 Mutant Complexed With L-Methionine
Length = 153
Score = 83.2 bits (204), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS G+ GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGVTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1UXL|A Chain A, I113t Mutant Of Human Sod1
pdb|1UXL|B Chain B, I113t Mutant Of Human Sod1
pdb|1UXL|C Chain C, I113t Mutant Of Human Sod1
pdb|1UXL|D Chain D, I113t Mutant Of Human Sod1
pdb|1UXL|E Chain E, I113t Mutant Of Human Sod1
pdb|1UXL|F Chain F, I113t Mutant Of Human Sod1
pdb|1UXL|G Chain G, I113t Mutant Of Human Sod1
pdb|1UXL|H Chain H, I113t Mutant Of Human Sod1
pdb|1UXL|I Chain I, I113t Mutant Of Human Sod1
pdb|1UXL|J Chain J, I113t Mutant Of Human Sod1
pdb|3ECV|A Chain A, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|B Chain B, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|C Chain C, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|3ECV|D Chain D, Crystal Structure Of The Als-Related Pathological Mutant
I113t Of Human Apo Cu,Zn Superoxide Dismutase (Sod1)
pdb|4A7G|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group.
pdb|4A7Q|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7Q|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 4-(4-
Methyl-1,4-Diazepan-1-Yl)quinazoline In The P21 Space
Group.
pdb|4A7S|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7S|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With 5-
Fluorouridine In The P21 Space Group
pdb|4A7T|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7T|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Isoproteranol In The P21 Space Group
pdb|4A7U|A Chain A, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7U|F Chain F, Structure Of Human I113t Sod1 Complexed With Adrenaline In
The P21 Space Group.
pdb|4A7V|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
pdb|4A7V|F Chain F, Structure Of Human I113t Sod1 Mutant Complexed With
Dopamine In The P21 Space Group
Length = 153
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + I GR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCITGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|4A7G|A Chain A, Structure Of Human I113t Sod1 Mutant Complexed With 4-
Methylpiperazin-1-Yl)quinazoline In The P21 Space Group
Length = 153
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D V D+ ISLSG + I GR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSTEDSVISLSGDHCITGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2VR8|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
pdb|2VR8|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.36 A Resolution
Length = 154
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DL N
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|3CQQ|A Chain A, Human Sod1 G85r Variant, Structure Ii
pdb|3CQQ|B Chain B, Human Sod1 G85r Variant, Structure Ii
Length = 153
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DL N
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3QQD|A Chain A, Human Sod1 H80r Variant, P212121 Crystal Form
pdb|3QQD|B Chain B, Human Sod1 H80r Variant, P212121 Crystal Form
Length = 154
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERRVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHXIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|2VR7|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
pdb|2VR7|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.58 A Resolution
Length = 154
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DL N
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|2VR6|A Chain A, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|2VR6|F Chain F, Crystal Structure Of G85r Als Mutant Of Human Cu,Zn
Superoxide Dismutase (Cuznsod) At 1.3 A Resolution
pdb|3CQP|A Chain A, Human Sod1 G85r Variant, Structure I
pdb|3CQP|B Chain B, Human Sod1 G85r Variant, Structure I
pdb|3CQP|C Chain C, Human Sod1 G85r Variant, Structure I
pdb|3CQP|D Chain D, Human Sod1 G85r Variant, Structure I
Length = 153
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DL N
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1AZV|A Chain A, Familial Als Mutant G37r Cuznsod (Human)
pdb|1AZV|B Chain B, Familial Als Mutant G37r Cuznsod (Human)
Length = 153
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS L GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKRLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2ZKW|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKW|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group P21
pdb|2ZKX|A Chain A, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|B Chain B, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|C Chain C, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
pdb|2ZKX|D Chain D, Crystal Structure Of Human Cu-Zn Superoxide Dismutase
Mutant G85r In Space Group I212121
Length = 159
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DL N
Sbjct: 33 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLRN 92
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 93 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 146
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 147 GSRLACGVIGI 157
>pdb|1OEZ|W Chain W, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|X Chain X, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Y Chain Y, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OEZ|Z Chain Z, Zn His46arg Mutant Of Human Cu, Zn Superoxide Dismutase
pdb|1OZT|M Chain M, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|N Chain N, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|G Chain G, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|H Chain H, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|K Chain K, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|L Chain L, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|I Chain I, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
pdb|1OZT|J Chain J, Crystal Structure Of Apo-H46r Familial Als Mutant Human
Cu, Zn Superoxide Dismutase (Cuznsod) To 2.5a Resolution
Length = 153
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGF VH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFRVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3H2Q|A Chain A, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|B Chain B, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|C Chain C, Human Sod1 H80r Variant, P21 Crystal Form
pdb|3H2Q|D Chain D, Human Sod1 H80r Variant, P21 Crystal Form
Length = 153
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERRVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2R27|A Chain A, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
pdb|2R27|B Chain B, Constitutively Zinc-Deficient Mutant Of Human Superoxide
Dismutase (Sod), C6a, H80s, H83s, C111s
Length = 154
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGNTTNDPTLTVLDKNTVLQMMKNCHDCD-----LGN 111
G V GS GL GLHGFHVH G+ T T N + + D + LGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERSVGSLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|3H2P|A Chain A, Human Sod1 D124v Variant
pdb|3H2P|B Chain B, Human Sod1 D124v Variant
Length = 153
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH +LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKAVDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|1DSW|A Chain A, The Solution Structure Of A Monomeric, Reduced Form Of
Human Copper, Zinc Superoxide Dismutase Bearing The Same
Charge As The Native Protein
Length = 153
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHA-----LGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG +SIIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHSIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIG 175
G R+ACG IG
Sbjct: 141 GSRLACGKIG 150
>pdb|3HFF|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Zn
Ligands
Length = 153
Score = 80.9 bits (198), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 69/131 (52%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHA-----LGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGFHVH G T+ P+ L + + + LGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHEEEDNTAGCTSAGPSFNPLSRKSGGPKDEERSVGSLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG ++IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|4BCY|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Mutation H43f
Length = 153
Score = 80.5 bits (197), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 68/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHA-----LGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GL GFHVH G T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLFGFHVHEEEDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG ++IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHAIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3GTT|A Chain A, Mouse Sod1
pdb|3GTT|B Chain B, Mouse Sod1
pdb|3GTT|C Chain C, Mouse Sod1
pdb|3GTT|D Chain D, Mouse Sod1
pdb|3GTT|E Chain E, Mouse Sod1
pdb|3GTT|F Chain F, Mouse Sod1
Length = 153
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 59 TTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNAN 113
++G +GL G HGFHVH G+ T P K + H DLGN
Sbjct: 29 VVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVT 88
Query: 114 VRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAGG 167
D + D ISLSG +SIIGR +VVH D+LGK GG+E S TGNAG
Sbjct: 89 AGKDGVANVSIEDRVISLSGEHSIIGRTMVVHEKQDDLGK------GGNEESTKTGNAGS 142
Query: 168 RVACGIIGI 176
R+ACG+IGI
Sbjct: 143 RLACGVIGI 151
>pdb|3GQF|A Chain A, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|B Chain B, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|C Chain C, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|D Chain D, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|E Chain E, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3GQF|F Chain F, Structural And Biophysical Properties Of The Pathogenic
Sod1 Variant H46rH48Q
pdb|3K91|A Chain A, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
pdb|3K91|B Chain B, Polysulfane Bridge In Cu-Zn Superoxide Dismutase
Length = 153
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGF V G+ T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|2NNX|A Chain A, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|B Chain B, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|C Chain C, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
pdb|2NNX|D Chain D, Crystal Structure Of The H46r, H48q Double Mutant Of Human
[cu-Zn] Superoxide Dismutase
Length = 154
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN-----TTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGF V G+ T+ P L + + H DLGN
Sbjct: 28 GPVKVWGSIKGLTEGLHGFRVQEFGDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 87
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNA
Sbjct: 88 VTADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNA 141
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 142 GSRLACGVIGI 152
>pdb|3LTV|A Chain A, Mouse-Human Sod1 Chimera
pdb|3LTV|B Chain B, Mouse-Human Sod1 Chimera
pdb|3LTV|C Chain C, Mouse-Human Sod1 Chimera
pdb|3LTV|D Chain D, Mouse-Human Sod1 Chimera
pdb|3LTV|E Chain E, Mouse-Human Sod1 Chimera
pdb|3LTV|F Chain F, Mouse-Human Sod1 Chimera
Length = 153
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 59 TTVTGSFSGLKPGLHGFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNAN 113
++G +GL G HGFHVH G+ T P K + H DLGN
Sbjct: 29 VVLSGQITGLTEGQHGFHVHQYGDNTQGCTSAGPHFNPHSKKHGGPADEERHVGDLGNVT 88
Query: 114 VRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAGG 167
D + D+ ISLSG + IIGR +VVH D+LGK GG+E S TGNAG
Sbjct: 89 ADKDGVADVSIEDSVISLSGDHCIIGRTLVVHEKADDLGK------GGNEESTKTGNAGS 142
Query: 168 RVACGIIGI 176
R+ACG+IGI
Sbjct: 143 RLACGVIGI 151
>pdb|2XJL|A Chain A, Monomeric Human Cu,Zn Superoxide Dismutase Without Cu
Ligands
Length = 153
Score = 73.9 bits (180), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 57 GQTTVTGSFSGLKPGLHGFHV-----HALGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGN 111
G V GS GL GLHGF V + G T+ P L + + H DLGN
Sbjct: 27 GPVKVWGSIKGLTEGLHGFSVSEEEDNTAGCTSAGPHFNPLSRKHGGPKDEERHVGDLGN 86
Query: 112 ANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNA 165
D + D+ ISLSG ++IIGR +VV D+LGK GG+E S TGNA
Sbjct: 87 VTADKDGVADVSIEDSVISLSGDHAIIGRTLVVSEKADDLGK------GGNEESTKTGNA 140
Query: 166 GGRVACGIIGI 176
G R+ACG+IGI
Sbjct: 141 GSRLACGVIGI 151
>pdb|3CE1|A Chain A, Crystal Structure Of The CuZN SUPEROXIDE DISMUTASE FROM
Cryptococcus Liquefaciens Strain N6
Length = 168
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 37 SSGVTEIATNRSDDLIMG--------DGGQTTVTGSFSGLKP-GLHGFHVHALGNTTND- 86
SS + IA + D + G GG TV+G + GFHVH G+ +N
Sbjct: 2 SSTIKAIAVLKGDSPVQGVITFTQESSGGPVTVSGEIKNMDANAQRGFHVHQFGDNSNGC 61
Query: 87 ----PTLTVLDKNTVLQMMKNCHDCDLGNAN------VRDDVVDNQISLSGPNSIIGRAV 136
P N + + H DLGN + + D+Q+SL GP+SIIGR +
Sbjct: 62 TSAGPHFNPTGTNHGDRTAEVRHVGDLGNVKTDASGVAKVQISDSQLSLVGPHSIIGRTI 121
Query: 137 VVHSDPDNLGKECSSPSGGHELSKTTGNAGGRVACGIIGI 176
V+H+ D+LGK H S TGNAG R ACG+IGI
Sbjct: 122 VIHAGEDDLGKT------DHPESLKTGNAGARSACGVIGI 155
>pdb|1SDY|A Chain A, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|B Chain B, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|C Chain C, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1SDY|D Chain D, Structure Solution And Molecular Dynamics Refinement Of
The Yeast Cu,Zn Enzyme Superoxide Dismutase
pdb|1B4L|A Chain A, 15 Atmosphere Oxygen Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1YAZ|A Chain A, Azide-Bound Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
pdb|1JCV|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE LOW
TEMPERATURE (-180c) Structure
pdb|1YSO|A Chain A, Yeast Cu, Zn Superoxide Dismutase With The Reduced Bridge
Broken
pdb|2JCW|A Chain A, Reduced Bridge-Broken Yeast CuZN SUPEROXIDE DISMUTASE ROOM
Temperature (298k) Structure
Length = 153
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLH-GFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNA 112
TTV+ +G P GFH+H G+ TN P K + H D+GN
Sbjct: 28 TTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNV 87
Query: 113 NVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
++ V D+ I L GP S++GR+VV+H+ D+LGK G E S TGNAG
Sbjct: 88 KTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK------GDTEESLKTGNAG 141
Query: 167 GRVACGIIGI 176
R ACG+IG+
Sbjct: 142 PRPACGVIGL 151
>pdb|1F1G|A Chain A, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|B Chain B, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|C Chain C, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|D Chain D, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|E Chain E, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
pdb|1F1G|F Chain F, Crystal Structure Of Yeast Cuznsod Exposed To Nitric Oxide
Length = 154
Score = 66.2 bits (160), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 65/130 (50%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLH-GFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNA 112
TTV+ +G P GFH+H G+ TN P K + H D+GN
Sbjct: 29 TTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNV 88
Query: 113 NVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
++ V D+ I L GP S++GR+VV+H+ D+LGK G E S TGNAG
Sbjct: 89 KTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK------GDTEESLKTGNAG 142
Query: 167 GRVACGIIGI 176
R ACG+IG+
Sbjct: 143 PRPACGVIGL 152
>pdb|1F1A|A Chain A, Crystal Structure Of Yeast H48q Cuznsod Fals Mutant Analog
Length = 154
Score = 63.9 bits (154), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLH-GFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNA 112
TTV+ +G P GFH+ G+ TN P K + H D+GN
Sbjct: 29 TTVSYEIAGNSPNAERGFHIQEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNV 88
Query: 113 NVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
++ V D+ I L GP S++GR+VV+H+ D+LGK G E S TGNAG
Sbjct: 89 KTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK------GDTEESLKTGNAG 142
Query: 167 GRVACGIIGI 176
R ACG+IG+
Sbjct: 143 PRPACGVIGL 152
>pdb|1F18|A Chain A, Crystal Structure Of Yeast Copper-Zinc Superoxide
Dismutase Mutant Gly85arg
Length = 154
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLH-GFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNA 112
TTV+ +G P GFH+H G+ TN P K + H D+ N
Sbjct: 29 TTVSYEIAGNSPNAERGFHIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMRNV 88
Query: 113 NVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
++ V D+ I L GP S++GR+VV+H+ D+LGK G E S TGNAG
Sbjct: 89 KTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK------GDTEESLKTGNAG 142
Query: 167 GRVACGIIGI 176
R ACG+IG+
Sbjct: 143 PRPACGVIGL 152
>pdb|1JK9|A Chain A, Heterodimer Between H48f-Ysod1 And Yccs
pdb|1JK9|C Chain C, Heterodimer Between H48f-Ysod1 And Yccs
Length = 153
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLH-GFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNA 112
TTV+ +G P GFH+ G+ TN P K + H D+GN
Sbjct: 28 TTVSYEIAGNSPNAERGFHIFEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNV 87
Query: 113 NVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
++ V D+ I L GP S++GR+VV+H+ D+LGK G E S TGNAG
Sbjct: 88 KTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK------GDTEESLKTGNAG 141
Query: 167 GRVACGIIGI 176
R ACG+IG+
Sbjct: 142 PRPACGVIGL 151
>pdb|2JLP|A Chain A, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|B Chain B, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|C Chain C, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase.
pdb|2JLP|D Chain D, Crystal Structure Of Human Extracellular Copper-Zinc
Superoxide Dismutase
Length = 222
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 69/150 (46%), Gaps = 33/150 (22%)
Query: 55 DGGQTTVTGS--FSGLKP--------GLHGF-----------HVHALGNTTNDPTLTVLD 93
D Q VTG F L P L GF HVH G+ + T
Sbjct: 54 DAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCESTGPH 113
Query: 94 KNTVLQMMKNCHDCDLGNANVRDDVVDNQ-----ISLSGPNSIIGRAVVVHSDPDNLGKE 148
N L + H D GN VRD + SL+GP+SI+GRAVVVH+ D+LG+
Sbjct: 114 YNP-LAVPHPQHPGDFGNFAVRDGSLWRYRAGLAASLAGPHSIVGRAVVVHAGEDDLGR- 171
Query: 149 CSSPSGGHELSKTTGNAGGRVACGIIGIQG 178
GG++ S GNAG R+AC ++G+ G
Sbjct: 172 -----GGNQASVENGNAGRRLACCVVGVCG 196
>pdb|1DO5|A Chain A, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|B Chain B, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|C Chain C, Human Copper Chaperone For Superoxide Dismutase Domain Ii
pdb|1DO5|D Chain D, Human Copper Chaperone For Superoxide Dismutase Domain Ii
Length = 154
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 64/128 (50%), Gaps = 20/128 (15%)
Query: 58 QTTVTGSFSGLKPGLHGFHVHALGNTTNDPT-----LTVLDKNTVLQMMKNCHDCDLGNA 112
+ + G+ GL+PGLHG HVH G+ TN+ + + H DLGN
Sbjct: 29 RCLIEGTIDGLEPGLHGLHVHQYGDLTNNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNV 88
Query: 113 NVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
D + D Q+ + +IGR++++ D+LG+ GGH LSK TGN+G
Sbjct: 89 RADADGRAIFRMEDEQLKVW---DVIGRSLIIDEGEDDLGR------GGHPLSKITGNSG 139
Query: 167 GRVACGII 174
R+ACGII
Sbjct: 140 ERLACGII 147
>pdb|1B4T|A Chain A, H48c Yeast Cu(Ii)ZN SUPEROXIDE DISMUTASE ROOM TEMPERATURE
(298k) Structure
Length = 153
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLH-GFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNA 112
TTV+ +G P GFH+ G+ TN P K + H D+GN
Sbjct: 28 TTVSYEIAGNSPNAERGFHICEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNV 87
Query: 113 NVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
++ V D+ I L GP S++GR+VV+H+ D+LGK G E S TGNAG
Sbjct: 88 KTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK------GDTEESLKTGNAG 141
Query: 167 GRVACGIIGI 176
R ACG+IG+
Sbjct: 142 PRPACGVIGL 151
>pdb|1F1D|A Chain A, Crystal Structure Of Yeast H46c Cuznsod Mutant
Length = 154
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 59 TTVTGSFSGLKPGLH-GFHVHALGNTTND-----PTLTVLDKNTVLQMMKNCHDCDLGNA 112
TTV+ +G P GF +H G+ TN P K + H D+GN
Sbjct: 29 TTVSYEIAGNSPNAERGFCIHEFGDATNGCVSAGPHFNPFKKTHGAPTDEVRHVGDMGNV 88
Query: 113 NVRDDVV------DNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
++ V D+ I L GP S++GR+VV+H+ D+LGK G E S TGNAG
Sbjct: 89 KTDENGVAKGSFKDSLIKLIGPTSVVGRSVVIHAGQDDLGK------GDTEESLKTGNAG 142
Query: 167 GRVACGIIGI 176
R ACG+IG+
Sbjct: 143 PRPACGVIGL 152
>pdb|4BCZ|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form.
pdb|4BCZ|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form
Length = 110
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 51/120 (42%), Gaps = 38/120 (31%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGNANVRD 116
G V GS GL GLHGFHVH G + T DK+ V +
Sbjct: 27 GPVKVWGSIKGLTEGLHGFHVHGAGGDLGNVT---ADKDGVADV---------------- 67
Query: 117 DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAGGRVACGIIGI 176
+ D+ ISLSG +SIIGR +VVH K AG R+A G+IGI
Sbjct: 68 SIEDSVISLSGDHSIIGRTLVVH-------------------EKAGAGAGSRLASGVIGI 108
>pdb|4BD4|A Chain A, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|B Chain B, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|C Chain C, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|D Chain D, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|E Chain E, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|F Chain F, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|G Chain G, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|H Chain H, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
pdb|4BD4|I Chain I, Monomeric Human Cu,zn Superoxide Dismutase, Loops Iv And
Vii Deleted, Apo Form, Mutant H43f
Length = 110
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 50/120 (41%), Gaps = 38/120 (31%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGNTTNDPTLTVLDKNTVLQMMKNCHDCDLGNANVRD 116
G V GS GL GL GFHVH G + T DK+ V +
Sbjct: 27 GPVKVWGSIKGLTEGLFGFHVHGAGGDLGNVT---ADKDGVADV---------------- 67
Query: 117 DVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAGGRVACGIIGI 176
+ D+ ISLSG +SIIGR +VVH K AG R+A G+IGI
Sbjct: 68 SIEDSVISLSGDHSIIGRTLVVH-------------------EKAGAGAGSRLASGVIGI 108
>pdb|1PZS|A Chain A, Crystal Structure Of A Cu-Zn Superoxide Dismutase From
Mycobacterium Tuberculosis At 1.63 Resolution
Length = 208
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 24/158 (15%)
Query: 41 TEIATNRSDDLIMGDGGQTTVTGSFSGLKPGLHGFHVHALGN-TTNDPTLTVLDKNTVLQ 99
T++AT + + G T T L PG HG H+H +G N T L
Sbjct: 50 TKVATAKFE-FANGYATVTIATTGVGKLTPGFHGLHIHQVGKCEPNSVAPTGGAPGNFLS 108
Query: 100 MMKNCH---------DCDLGNANVRDD------VVDNQISLSGPNSIIGRAVVVHSDPDN 144
+ H DL + VR D + ++ S A+++H+ DN
Sbjct: 109 AGGHYHVPGHTGTPASGDLASLQVRGDGSAMLVTTTDAFTMDDLLSGAKTAIIIHAGADN 168
Query: 145 LGK-------ECSSPSGGHELSKTTGNAGGRVACGIIG 175
+ + G E + TTG+AG RVACG+IG
Sbjct: 169 FANIPPERYVQVNGTPGPDETTLTTGDAGKRVACGVIG 206
>pdb|1YAI|A Chain A, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|B Chain B, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
pdb|1YAI|C Chain C, X-Ray Structure Of A Bacterial Copper,Zinc Superoxide
Dismutase
Length = 151
Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 52/139 (37%), Gaps = 39/139 (28%)
Query: 59 TTVTGSFSGLKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMM 101
T + L PG+HGFH+H G+ + DP T
Sbjct: 28 VVFTPELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPWT 84
Query: 102 KNCHDCDL------GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGG 155
+ H DL N + V+ +++L + G A+++H+ DN
Sbjct: 85 DDNHKGDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS--------- 132
Query: 156 HELSKTTGNAGGRVACGII 174
++ K G G RVACG+I
Sbjct: 133 -DMPKALGGGGARVACGVI 150
>pdb|1IBB|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83f
Length = 151
Score = 31.6 bits (70), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 35/128 (27%)
Query: 68 LKPGLHGFHVHALGNTTNDPTLTVLDKNTVL---------QMMKNCHDCDLGNANVRDDV 118
L PG+HGFH+H G+ + D VL N H + N + D+
Sbjct: 37 LTPGMHGFHIHQNGSCASSEK----DGKVVLGGAAGGHYDPEHTNKHGFPFTDDNHKGDL 92
Query: 119 VDNQISLSG------------PNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAG 166
+S +G + G A+++H+ DN ++ K G G
Sbjct: 93 PALFVSANGLATNPVLAPRLTLKELKGHAIMIHAGGDNHS----------DMPKALGGGG 142
Query: 167 GRVACGII 174
RVACG+I
Sbjct: 143 ARVACGVI 150
>pdb|1IBF|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29g
Length = 151
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 50/130 (38%), Gaps = 39/130 (30%)
Query: 68 LKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMMKNCHDCDL- 109
L PG+HGFH+H G+ + DP T + H DL
Sbjct: 37 LTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPWTDDNHKGDLP 93
Query: 110 -----GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGN 164
N + V+ +++L + G A+++H+ DN ++ K G
Sbjct: 94 ALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS----------DMPKALGG 140
Query: 165 AGGRVACGII 174
G RVACG+I
Sbjct: 141 GGARVACGVI 150
>pdb|1IBD|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant V29a
Length = 151
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 39/134 (29%)
Query: 64 SFSGLKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMMKNCHD 106
+ L PG+HGFH+H G+ + DP T + H
Sbjct: 33 ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPWTDDNHK 89
Query: 107 CDL------GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSK 160
DL N + V+ +++L + G A+++H+ DN ++ K
Sbjct: 90 GDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS----------DMPK 136
Query: 161 TTGNAGGRVACGII 174
G G RVACG+I
Sbjct: 137 ALGGGGARVACGVI 150
>pdb|1BZO|A Chain A, Three-Dimensional Structure Of Prokaryotic Cu,Zn
Superoxide Dismutase From P.Leiognathi, Solved By X-Ray
Crystallography
Length = 151
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 39/134 (29%)
Query: 64 SFSGLKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMMKNCHD 106
+ L PG+HGFH+H G+ + DP T + H
Sbjct: 33 ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPWTDDNHK 89
Query: 107 CDL------GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSK 160
DL N + V+ +++L + G A+++H+ DN ++ K
Sbjct: 90 GDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS----------DMPK 136
Query: 161 TTGNAGGRVACGII 174
G G RVACG+I
Sbjct: 137 ALGGGGARVACGVI 150
>pdb|1OAJ|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 31.2 bits (69), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 39/134 (29%)
Query: 64 SFSGLKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMMKNCHD 106
+ L PG+HGFH+H G+ + DP T + H
Sbjct: 33 ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPWTDDNHK 89
Query: 107 CDL------GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSK 160
DL N + V+ +++L + G A+++H+ DN ++ K
Sbjct: 90 GDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS----------DMPK 136
Query: 161 TTGNAGGRVACGII 174
G G RVACG+I
Sbjct: 137 ALGGGGARVACGVI 150
>pdb|1IB5|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant W83y
Length = 151
Score = 31.2 bits (69), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 39/134 (29%)
Query: 64 SFSGLKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMMKNCHD 106
+ L PG+HGFH+H G+ + DP T + H
Sbjct: 33 ELADLTPGMHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPYTDDNHK 89
Query: 107 CDL------GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSK 160
DL N + V+ +++L + G A+++H+ DN ++ K
Sbjct: 90 GDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS----------DMPK 136
Query: 161 TTGNAGGRVACGII 174
G G RVACG+I
Sbjct: 137 ALGGGGARVACGVI 150
>pdb|1IBH|A Chain A, X-Ray 3d Structure Of P.Leiognathi Cu,Zn Sod Mutant M41i
Length = 151
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 39/134 (29%)
Query: 64 SFSGLKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMMKNCHD 106
+ L PG+HGFH+H G+ + DP T + H
Sbjct: 33 ELADLTPGIHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPWTDDNHK 89
Query: 107 CDL------GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSK 160
DL N + V+ +++L + G A+++H+ DN ++ K
Sbjct: 90 GDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS----------DMPK 136
Query: 161 TTGNAGGRVACGII 174
G G RVACG+I
Sbjct: 137 ALGGGGARVACGVI 150
>pdb|1OAL|A Chain A, Active Site Copper And Zinc Ions Modulate The Quaternary
Structure Of Prokaryotic Cu,Zn Superoxide Dismutase
Length = 151
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 50/134 (37%), Gaps = 39/134 (29%)
Query: 64 SFSGLKPGLHGFHVHALGNTTN-----------------DPTLTVLDKNTVLQMMKNCHD 106
+ L PG HGFH+H G+ + DP T + H
Sbjct: 33 ELADLTPGEHGFHIHQNGSCASSEKDGKVVLGGAAGGHYDPEHT---NKHGFPWTDDNHK 89
Query: 107 CDL------GNANVRDDVVDNQISLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSK 160
DL N + V+ +++L + G A+++H+ DN ++ K
Sbjct: 90 GDLPALFVSANGLATNPVLAPRLTLK---ELKGHAIMIHAGGDNHS----------DMPK 136
Query: 161 TTGNAGGRVACGII 174
G G RVACG+I
Sbjct: 137 ALGGGGARVACGVI 150
>pdb|1ESO|A Chain A, Monomeric Cu,Zn Superoxide Dismutase From Escherichia Coli
Length = 154
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 27/127 (21%)
Query: 65 FSGLKPGLHGFHVHALGN---TTNDPTLTVLDKNTVLQMMKNC----------HDCDLGN 111
L PG HGFH+HA G+ T D + + +N H DL
Sbjct: 37 LKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHEGPEGAGHLGDLPA 96
Query: 112 ANVRDD--VVDNQIS--LSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELSKTTGNAGG 167
V +D D I+ L + I +A++VH DN+ + K G G
Sbjct: 97 LVVNNDGKATDAVIAPRLKSLDEIKDKALMVHVGGDNMSDQ----------PKPLGGGGE 146
Query: 168 RVACGII 174
R ACG+I
Sbjct: 147 RYACGVI 153
>pdb|1EQW|A Chain A, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|B Chain B, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|C Chain C, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
pdb|1EQW|D Chain D, Crystal Structure Of Salmonella Typhimurium Cu,Zn
Superoxide Dismutase
Length = 156
Score = 28.5 bits (62), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 36/136 (26%)
Query: 61 VTGSFSGLKPGLHGFHVHALGNTTNDPTLTVLDKNTVLQMMKNCH------DCDLGNANV 114
T +GL PG+HGFHVH N + P + D V +M H LG N
Sbjct: 33 FTPHLNGLTPGIHGFHVHT--NPSCMPGMK--DGKEVPALMAGGHLDPEKTGKHLGPYND 88
Query: 115 RDDVVD-----------NQISLSGP-----NSIIGRAVVVHSDPDNLGKECSSPSGGHEL 158
+ + D L P + + G ++++H DN + + GG
Sbjct: 89 KGHLGDLPGLVVNADGTATYPLLAPRLKSLSELKGHSLMIHKGGDNYSDKPAPLGGG--- 145
Query: 159 SKTTGNAGGRVACGII 174
G R ACG+I
Sbjct: 146 -------GARFACGVI 154
>pdb|2WWN|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWN|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C With
Bound Azide
pdb|2WWO|A Chain A, Yersinia Pseudotuberculosis Superoxide Dismutase C
pdb|2WWO|B Chain B, Yersinia Pseudotuberculosis Superoxide Dismutase C
Length = 169
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 15/68 (22%)
Query: 11 NDKATTNATIGDGCHRQEGSSPFSLPSSGVTEIATNRSDDLIMGDGGQTTVTGSFSGLKP 70
NDKA+ I + + G + L + VTE A T +GL P
Sbjct: 12 NDKASMTVKINESLPQGNGKA---LGTVTVTETAYG------------LLFTPHLTGLAP 56
Query: 71 GLHGFHVH 78
G+HGFH+H
Sbjct: 57 GIHGFHLH 64
>pdb|1PJZ|A Chain A, Solution Structure Of Thiopurine Methyltransferase From
Pseudomonas Syringae
Length = 203
Score = 27.7 bits (60), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Query: 32 PFSLPSSGVTEIATNRSDDLIMGDGGQTTVTGSFSGLKPGLHGF--HVHAL 80
PFS+P + + + + + + GGQ T+ S GLK GL HV+ L
Sbjct: 152 PFSVPQTWLHRVMSGNWE--VTKVGGQDTLHSSARGLKAGLERMDEHVYVL 200
>pdb|2K4W|A Chain A, The Solution Structure Of The Monomeric Copper, Zinc
Superox Dismutase From Salmonella Enterica
Length = 154
Score = 27.3 bits (59), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 57 GQTTVTGSFSGLKPGLHGFHVHALGN 82
G T L PG HGFH+HA G+
Sbjct: 29 GGLKFTPHLKALPPGEHGFHIHANGS 54
>pdb|2AQS|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
pdb|2AQS|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91E, K94e Double Mutant
Length = 164
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 60 TVTGSFSGLKPGLHGFHVHALGNTTNDP-----TLTV-------LDKNTVLQ----MMKN 103
T GL GLHGFH+H N + +P LT D Q +
Sbjct: 41 VFTPDLQGLSEGLHGFHIHE--NPSCEPKEEEGELTAGLGAGGHWDPKGAKQHGYPWQDD 98
Query: 104 CHDCDLGNANV-RDDVVDNQI---SLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELS 159
H DL V D N + L + + G ++++H+ DN + +P GG
Sbjct: 99 AHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNH-SDHPAPLGG---- 153
Query: 160 KTTGNAGGRVACGII 174
G R+ACG+I
Sbjct: 154 -----GGPRMACGVI 163
>pdb|2AQT|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
pdb|2AQT|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
K91Q, K94q Double Mutant
Length = 164
Score = 26.6 bits (57), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 60 TVTGSFSGLKPGLHGFHVHALGNTTNDPT-----LTV-------LDKNTVLQ----MMKN 103
T GL GLHGFH+H N + +P LT D Q +
Sbjct: 41 VFTPDLQGLSEGLHGFHIHE--NPSCEPKEQEGQLTAGLGAGGHWDPKGAKQHGYPWQDD 98
Query: 104 CHDCDLGNANV-RDDVVDNQI---SLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELS 159
H DL V D N + L + + G ++++H+ DN + +P GG
Sbjct: 99 AHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNH-SDHPAPLGG---- 153
Query: 160 KTTGNAGGRVACGII 174
G R+ACG+I
Sbjct: 154 -----GGPRMACGVI 163
>pdb|2AQQ|A Chain A, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|B Chain B, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
pdb|2AQQ|C Chain C, CuZN SUPEROXID DISMUTATE FROM NEISSERIA MENINGITIDIS K91E
MUTANT
Length = 164
Score = 26.6 bits (57), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 60 TVTGSFSGLKPGLHGFHVHALGNTTNDP-----TLTV-------LDKNTVLQ----MMKN 103
T GL GLHGFH+H N + +P LT D Q +
Sbjct: 41 VFTPDLQGLSEGLHGFHIHE--NPSCEPKEEEGKLTAGLGAGGHWDPKGAKQHGYPWQDD 98
Query: 104 CHDCDLGNANV-RDDVVDNQI---SLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELS 159
H DL V D N + L + + G ++++H+ DN + +P GG
Sbjct: 99 AHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNH-SDHPAPLGG---- 153
Query: 160 KTTGNAGGRVACGII 174
G R+ACG+I
Sbjct: 154 -----GGPRMACGVI 163
>pdb|2AQN|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
pdb|2AQN|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS
Length = 164
Score = 26.2 bits (56), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 60 TVTGSFSGLKPGLHGFHVHALGNTTNDP-----TLTV-------LDKNTVLQ----MMKN 103
T GL GLHGFH+H N + +P LT D Q +
Sbjct: 41 VFTPDLQGLSEGLHGFHIHE--NPSCEPKEKEGKLTAGLGAGGHWDPKGAKQHGYPWQDD 98
Query: 104 CHDCDLGNANV-RDDVVDNQI---SLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELS 159
H DL V D N + L + + G ++++H+ DN + +P GG
Sbjct: 99 AHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNH-SDHPAPLGG---- 153
Query: 160 KTTGNAGGRVACGII 174
G R+ACG+I
Sbjct: 154 -----GGPRMACGVI 163
>pdb|2AQR|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
pdb|2AQR|C Chain C, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS K91Q
Mutant
Length = 164
Score = 26.2 bits (56), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 60 TVTGSFSGLKPGLHGFHVHALGNTTNDP-----TLTV-------LDKNTVLQ----MMKN 103
T GL GLHGFH+H N + +P LT D Q +
Sbjct: 41 VFTPDLQGLSEGLHGFHIHE--NPSCEPKEQEGKLTAGLGAGGHWDPKGAKQHGYPWQDD 98
Query: 104 CHDCDLGNANV-RDDVVDNQI---SLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELS 159
H DL V D N + L + + G ++++H+ DN + +P GG
Sbjct: 99 AHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNH-SDHPAPLGG---- 153
Query: 160 KTTGNAGGRVACGII 174
G R+ACG+I
Sbjct: 154 -----GGPRMACGVI 163
>pdb|2AQP|A Chain A, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
pdb|2AQP|B Chain B, CuZN SUPEROXIDE DISMUTASE FROM NEISSERIA MENINGITIDIS E73A
MUTANT
Length = 164
Score = 26.2 bits (56), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 52/135 (38%), Gaps = 32/135 (23%)
Query: 60 TVTGSFSGLKPGLHGFHVHALGNTTNDP-----TLTV-------LDKNTVLQ----MMKN 103
T GL GLHGFH+H N + +P LT D Q +
Sbjct: 41 VFTPDLQGLSAGLHGFHIHE--NPSCEPKEKEGKLTAGLGAGGHWDPKGAKQHGYPWQDD 98
Query: 104 CHDCDLGNANV-RDDVVDNQI---SLSGPNSIIGRAVVVHSDPDNLGKECSSPSGGHELS 159
H DL V D N + L + + G ++++H+ DN + +P GG
Sbjct: 99 AHLGDLPALTVLHDGTATNPVLAPRLKHLDDVRGHSIMIHTGGDNH-SDHPAPLGG---- 153
Query: 160 KTTGNAGGRVACGII 174
G R+ACG+I
Sbjct: 154 -----GGPRMACGVI 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,950,261
Number of Sequences: 62578
Number of extensions: 255811
Number of successful extensions: 778
Number of sequences better than 100.0: 112
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 486
Number of HSP's gapped (non-prelim): 140
length of query: 178
length of database: 14,973,337
effective HSP length: 92
effective length of query: 86
effective length of database: 9,216,161
effective search space: 792589846
effective search space used: 792589846
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 48 (23.1 bits)