BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047404
MNGGPSGFNNAPVTRAFVIACALFTVFFGIQGRFNKLGLSYQDIFQNFRLWRLIVSGFAF
SSAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVSFLFEVLTLALLKDPAMKLTSG
PYGLIFASFVPFYFDIPVSTRFRVFGVHFSDKSFIYLAGLQLLISSLNRSLLPGMCGILA
GSLYRPNFFRIRKAKFPEFITSFFSRLSLPSMGNPPAAPSRNVLGSIPSHAGRQAESNYP
LPVPSTIEPPEDSIAMLVSMGFDRNSARQALVQARNDINAATNILLEAQPH

High Scoring Gene Products

Symbol, full name Information P value
AT3G56740 protein from Arabidopsis thaliana 1.8e-117
AT2G41160 protein from Arabidopsis thaliana 1.4e-101
UBAC2
Ubiquitin-associated domain-containing protein 2
protein from Homo sapiens 2.2e-28
UBAC2
Ubiquitin-associated domain-containing protein 2
protein from Gallus gallus 3.2e-28
zgc:158645 gene_product from Danio rerio 4.4e-24
Ubac2
ubiquitin associated domain containing 2
protein from Mus musculus 2.9e-21

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047404
        (291 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2103625 - symbol:AT3G56740 "AT3G56740" species...  1157  1.8e-117  1
TAIR|locus:2063182 - symbol:AT2G41160 "AT2G41160" species...  1007  1.4e-101  1
UNIPROTKB|Q8NBM4 - symbol:UBAC2 "Ubiquitin-associated dom...   224  2.2e-28   2
UNIPROTKB|Q5ZJQ8 - symbol:UBAC2 "Ubiquitin-associated dom...   230  3.2e-28   2
ZFIN|ZDB-GENE-070112-2122 - symbol:zgc:158645 "zgc:158645...   209  4.4e-24   2
MGI|MGI:1916139 - symbol:Ubac2 "ubiquitin associated doma...   197  2.9e-21   2
POMBASE|SPAC1486.02c - symbol:dsc2 "Golgi Dsc E3 ligase c...   147  6.3e-09   2


>TAIR|locus:2103625 [details] [associations]
            symbol:AT3G56740 "AT3G56740" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000449
            InterPro:IPR009060 Pfam:PF00627 Pfam:PF04511 EMBL:CP002686
            GenomeReviews:BA000014_GR InterPro:IPR015940 SMART:SM00165
            PROSITE:PS50030 EMBL:AL390921 SUPFAM:SSF46934 InterPro:IPR007599
            eggNOG:NOG150916 HOGENOM:HOG000237751 ProtClustDB:CLSN2684207
            UniGene:At.26610 UniGene:At.48777 EMBL:AY085810 EMBL:BT005215
            EMBL:AK227952 IPI:IPI00530417 PIR:T51262 RefSeq:NP_191233.1
            ProteinModelPortal:Q9LET3 SMR:Q9LET3 PaxDb:Q9LET3 PRIDE:Q9LET3
            EnsemblPlants:AT3G56740.1 GeneID:824841 KEGG:ath:AT3G56740
            TAIR:At3g56740 InParanoid:Q9LET3 OMA:STPELMF PhylomeDB:Q9LET3
            Genevestigator:Q9LET3 Uniprot:Q9LET3
        Length = 293

 Score = 1157 (412.3 bits), Expect = 1.8e-117, P = 1.8e-117
 Identities = 225/293 (76%), Positives = 255/293 (87%)

Query:     1 MNGGPSGFNNAPVTRAFVIACALFTVFFGIQGRFNKLGLSYQDIFQNFRLWRLIVSGFAF 60
             MNGGPSGF+NAPVT+AFVI  ALFTVFFGIQGR +KLGLSYQDIF+ FR+W+LI+S FAF
Sbjct:     1 MNGGPSGFHNAPVTKAFVITSALFTVFFGIQGRSSKLGLSYQDIFEKFRIWKLIMSTFAF 60

Query:    61 SSAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVSFLFEVLTLALLKDP-AMKLTS 119
             SS PELMFGLYLLYYFRVFERQIGSNKYSVFILFS TVS L EV+ L+LLKD  A  LTS
Sbjct:    61 SSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTVSLLLEVILLSLLKDTTANLLTS 120

Query:   120 GPYGLIFASFVPFYFDIPVSTRFRVFGVHFSDKSFIYLAGLQLLISSLNRSLLPGMCGIL 179
             GPYGLIFASF+PFY DIPVSTRFRVFGV+FSDKSFIYLAG+QLL+SS  RS+ PG+CGI+
Sbjct:   121 GPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYLAGVQLLLSSWKRSIFPGICGII 180

Query:   180 AGSLYRPNFFRIRKAKFPEFITSFFSRLSLPSMGN-PPAAPSRNVLGSIPSHAGRQAESN 238
             AGSLYR N   IRKAKFPEF+ SFFSRLS PS GN PP APSRN++G+I  + GR+AE +
Sbjct:   181 AGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPPPAPSRNIVGTISPNTGRRAERS 240

Query:   239 YPLPVPSTIEPPEDSIAMLVSMGFDRNSARQALVQARNDINAATNILLEAQPH 291
              P P+PS++EP E++I  LVSMGFDRN+ARQALV ARND+NAATNILLEAQ H
Sbjct:   241 QPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARNDVNAATNILLEAQSH 293


>TAIR|locus:2063182 [details] [associations]
            symbol:AT2G41160 "AT2G41160" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] InterPro:IPR000449
            InterPro:IPR009060 Pfam:PF00627 Pfam:PF04511 EMBL:CP002685
            GenomeReviews:CT485783_GR InterPro:IPR015940 SMART:SM00165
            PROSITE:PS50030 SUPFAM:SSF46934 InterPro:IPR007599 UniGene:At.27719
            EMBL:AY080734 EMBL:AY133793 IPI:IPI00524947 RefSeq:NP_850346.1
            ProteinModelPortal:Q8RXQ2 SMR:Q8RXQ2 STRING:Q8RXQ2 PaxDb:Q8RXQ2
            PRIDE:Q8RXQ2 EnsemblPlants:AT2G41160.1 GeneID:818715
            KEGG:ath:AT2G41160 TAIR:At2g41160 eggNOG:NOG317218
            HOGENOM:HOG000237751 InParanoid:Q8RXQ2 OMA:NIFGIRK
            ProtClustDB:CLSN2684207 Genevestigator:Q8RXQ2 Uniprot:Q8RXQ2
        Length = 287

 Score = 1007 (359.5 bits), Expect = 1.4e-101, P = 1.4e-101
 Identities = 202/292 (69%), Positives = 234/292 (80%)

Query:     1 MNGGPSGFNNAPVTRAFVIACALFTVFFGIQGRFNKLGLSYQDIFQNFRLWRLIVSGFAF 60
             MNGGPSGFNNAPVT+AFVIA ALFTVFFGI+G  +KLGLSYQDIF+ FR+W+LI+S FAF
Sbjct:     1 MNGGPSGFNNAPVTKAFVIATALFTVFFGIRGGSSKLGLSYQDIFEKFRIWKLIISAFAF 60

Query:    61 SSAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVSFLFEVLTLALLKDP-AMKLTS 119
             SS  +L+ GLYLLY+FRVFERQIGSNKYSVFI FS  VS + E + L+L KDP A  LTS
Sbjct:    61 SSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFVSLILETILLSLTKDPTANLLTS 120

Query:   120 GPYGLIFASFVPFYFDIPVSTRFRVFGVHFSDKSFIYLAGLQLLISSLNRSLLPGMCGIL 179
             GPY L+FASFVPF+ DIPV+ RF V GVHFSDKSFIYLAG+QLL+SS  RS+  G+CGI+
Sbjct:   121 GPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYLAGVQLLLSSWKRSIFTGICGII 180

Query:   180 AGSLYRPNFFRIRKAKFPEFITSFFSRLSLPSMGNPPAAPSRNVLGSIPSHAGRQAESNY 239
             AGSLYR N F IRKAKFPEF+ S FSR SLPS+ +    P R    + P+  GRQA   Y
Sbjct:   181 AGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQPPRR----TSPN-LGRQAVRAY 235

Query:   240 PLPVPSTIEPPEDSIAMLVSMGFDRNSARQALVQARNDINAATNILLEAQPH 291
               P+PST EP E++IA LVSMGFD+N+ARQALV ARND+NAATNILLEA  H
Sbjct:   236 RAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAATNILLEAHSH 287


>UNIPROTKB|Q8NBM4 [details] [associations]
            symbol:UBAC2 "Ubiquitin-associated domain-containing
            protein 2" species:9606 "Homo sapiens" [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR000449 InterPro:IPR009060
            Pfam:PF00627 GO:GO:0016021 Orphanet:117 InterPro:IPR015940
            SMART:SM00165 PROSITE:PS50030 SUPFAM:SSF46934 HSSP:Q10256
            eggNOG:NOG150916 EMBL:AL160155 CTD:337867 HOVERGEN:HBG106192
            EMBL:AK054563 EMBL:AK055110 EMBL:AK075419 EMBL:AK075516
            EMBL:AL136961 EMBL:AL159981 EMBL:BC063559 EMBL:BC072674
            EMBL:BC121138 EMBL:BC121139 IPI:IPI00007034 IPI:IPI00168284
            IPI:IPI00829931 IPI:IPI00829996 IPI:IPI00941744
            RefSeq:NP_001137544.1 RefSeq:NP_808882.1 UniGene:Hs.508545
            ProteinModelPortal:Q8NBM4 SMR:Q8NBM4 IntAct:Q8NBM4
            MINT:MINT-1428002 PhosphoSite:Q8NBM4 DMDM:74751173 PRIDE:Q8NBM4
            Ensembl:ENST00000355700 Ensembl:ENST00000376440
            Ensembl:ENST00000403766 GeneID:337867 KEGG:hsa:337867
            UCSC:uc001voa.4 UCSC:uc001vob.4 UCSC:uc001voh.3
            GeneCards:GC13P099852 HGNC:HGNC:20486 HPA:HPA013448
            neXtProt:NX_Q8NBM4 PharmGKB:PA162407839 InParanoid:Q8NBM4
            OMA:LISGMCY OrthoDB:EOG4W9J4B PhylomeDB:Q8NBM4 ChiTaRS:UBAC2
            GenomeRNAi:337867 NextBio:96748 ArrayExpress:Q8NBM4 Bgee:Q8NBM4
            CleanEx:HS_UBAC2 Genevestigator:Q8NBM4 Uniprot:Q8NBM4
        Length = 344

 Score = 224 (83.9 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
 Identities = 63/233 (27%), Positives = 114/233 (48%)

Query:     4 GPSGFNNAPVTRAFVIACALFTVFFGIQ-GRFNKLGL-SYQDIFQNFRLWRLIVSGFAFS 61
             G SG   AP++++ ++  +  ++   +      KL +     +  +F++WRLI       
Sbjct:     6 GSSGLYKAPLSKSLLLVPSALSLLLALLLPHCQKLFVYDLHAVKNDFQIWRLICGRIICL 65

Query:    62 SAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVSFLFEVLTLALLK-----DPAMK 116
                +      L+Y FR+FER+ GS K++ F+L S  +S LF+ L +  ++       A  
Sbjct:    66 DLKDTFCSSLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFLLIEAMQYFFGITAASN 125

Query:   117 LTSGPYGLIFASFVPFYFDIPVSTRFRVFG-VHFSDKSFIYLAGLQLLISSLNRSLLPGM 175
             L SG    +FA FVPFY  IP     ++ G +  ++K+ IY+ GLQL  S  +   +  +
Sbjct:   126 LPSGFLAPVFALFVPFYCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSG-SYIWIVAI 184

Query:   176 CGILAGSLYRPNFFRIRKAK-FPEFITSFFSRLSLPSMGNP-PAAPSRNVLGS 226
              G+++G  Y    F++ +    P ++  FFS    P   +  P + +R  +G+
Sbjct:   185 SGLMSGLCYDSKMFQVHQVLCIPSWMAKFFSWTLEPIFSSSEPTSEARIGMGA 237

 Score = 109 (43.4 bits), Expect = 2.2e-28, Sum P(2) = 2.2e-28
 Identities = 28/73 (38%), Positives = 38/73 (52%)

Query:   215 PPAAPSRNVLGSIPSHAGRQAESNYPLPVPSTIEPPEDSIAMLVSMGFDRNSARQALVQA 274
             PP    +NV        GRQ+E     P    +E  E+ +A L+ MGF R  A +AL  +
Sbjct:   280 PPLRQRQNV----NYQGGRQSE-----PAAPPLEVSEEQVARLMEMGFSRGDALEALRAS 330

Query:   275 RNDINAATNILLE 287
              ND+N ATN LL+
Sbjct:   331 NNDLNVATNFLLQ 343


>UNIPROTKB|Q5ZJQ8 [details] [associations]
            symbol:UBAC2 "Ubiquitin-associated domain-containing
            protein 2" species:9031 "Gallus gallus" [GO:0016021 "integral to
            membrane" evidence=IEA] InterPro:IPR000449 InterPro:IPR009060
            Pfam:PF00627 GO:GO:0016021 InterPro:IPR015940 SMART:SM00165
            PROSITE:PS50030 SUPFAM:SSF46934 HSSP:Q10256 eggNOG:NOG150916
            EMBL:AJ720376 IPI:IPI00592022 RefSeq:NP_001006268.1
            UniGene:Gga.22614 ProteinModelPortal:Q5ZJQ8
            Ensembl:ENSGALT00000027270 GeneID:418778 KEGG:gga:418778 CTD:337867
            GeneTree:ENSGT00390000000865 HOGENOM:HOG000253946
            HOVERGEN:HBG106192 NextBio:20821921 Uniprot:Q5ZJQ8
        Length = 344

 Score = 230 (86.0 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 61/211 (28%), Positives = 110/211 (52%)

Query:     4 GPSGFNNAPVTRAFVIACALFTVFFGIQGRFNKLGLSY--QDIFQNFRLWRLIVSGFAFS 61
             G +G   AP++++ ++  +  ++   +  +  +   +Y  Q I ++F++WRL+       
Sbjct:     6 GSNGLYKAPLSKSLLLVPSAISILLTLLFQHYQKFFAYNLQAIKEDFQIWRLVCGRVICL 65

Query:    62 SAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVSFLFEVLTLALLKD----PAMKL 117
                +      L+Y FR+FER+ GS K+S F+L + T+S LF++L +   +         L
Sbjct:    66 DLKDTFCSSLLIYNFRIFERRYGSRKFSSFLLGAWTLSALFDLLLVEAAQYVFGITINSL 125

Query:   118 TSGPYGLIFASFVPFYFDIPVSTRFRVFGVHFS--DKSFIYLAGLQLLISSLNRSLLPGM 175
              SG  G +FA FVPFY  IP     +V G +FS  +K+ +Y+ GLQLL S     +L  +
Sbjct:   126 PSGFLGPVFALFVPFYCSIPRVQVTQVLG-YFSITNKTLVYILGLQLLTSGSYIWIL-AL 183

Query:   176 CGILAGSLYRPNFFRIRKAK-FPEFITSFFS 205
              G+++G  Y  +  ++ +    P ++   FS
Sbjct:   184 SGLISGICYNSSILKVHRILCVPSWVAKIFS 214

 Score = 100 (40.3 bits), Expect = 3.2e-28, Sum P(2) = 3.2e-28
 Identities = 20/44 (45%), Positives = 27/44 (61%)

Query:   244 PSTIEPPEDSIAMLVSMGFDRNSARQALVQARNDINAATNILLE 287
             P   E  E+ +A L+ MGF R  A +AL  + ND+N ATN LL+
Sbjct:   300 PPPTEVSEEQVARLMEMGFSRGDALEALRASNNDLNVATNFLLQ 343


>ZFIN|ZDB-GENE-070112-2122 [details] [associations]
            symbol:zgc:158645 "zgc:158645" species:7955 "Danio
            rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] InterPro:IPR000449 InterPro:IPR009060 Pfam:PF00627
            ZFIN:ZDB-GENE-070112-2122 InterPro:IPR015940 SMART:SM00165
            PROSITE:PS50030 SUPFAM:SSF46934 GeneTree:ENSGT00390000000865
            OMA:NIFGIRK EMBL:BX004885 IPI:IPI00997132
            Ensembl:ENSDART00000140806 Bgee:F1QDH2 Uniprot:F1QDH2
        Length = 350

 Score = 209 (78.6 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 67/199 (33%), Positives = 105/199 (52%)

Query:     4 GPSGFNNAPVTRAFVIACALFTVFFGIQ-GRFNKLGL-SYQDIFQNFRLWRLIVSGFAFS 61
             G  G   AP++++ ++   + TV   +   ++  L + + Q I Q  + WRL VSG  F 
Sbjct:     7 GSWGLYKAPLSKSLLLLPTVLTVLLTVLLPQYQDLFIYNIQAIRQGKQFWRL-VSGRLFC 65

Query:    62 -SAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVS-FLFEVLTLALLKDPAMKLTS 119
                 +      L+Y FR+FER+ GS+K++ F+  +  +S F+  +LT AL     +K+  
Sbjct:    66 LDLKDTFCSSLLIYNFRIFERRFGSHKFASFLFGAWVLSAFVDLLLTEALRFTFELKVDV 125

Query:   120 GPYGL---IFASFVPFYFDIPVSTRFRVFGVHFS--DKSFIYLAGLQLLISSLNRSLLPG 174
              P GL   +FA FVPFY  IP     ++ G HFS  +KS  Y+ G QLL SS    ++  
Sbjct:   126 LPAGLLGPVFALFVPFYRSIPRVHVTQLLG-HFSITNKSLTYIVGAQLLTSSAYMWVV-A 183

Query:   175 MCGILAGSLYRPNFFRIRK 193
               G++AG LY  N   ++K
Sbjct:   184 CSGLIAGMLYYSNKLAVQK 202

 Score = 103 (41.3 bits), Expect = 4.4e-24, Sum P(2) = 4.4e-24
 Identities = 27/69 (39%), Positives = 36/69 (52%)

Query:   219 PSRNVLGSIPSHAGRQAESNYPLPVPSTIEPPEDSIAMLVSMGFDRNSARQALVQARNDI 278
             P+    G    H G Q  S Y  P  +     E+ +A L+ MGF R  A++AL  + NDI
Sbjct:   283 PTLRHRGQNRPHEGPQQPS-YTQPTENPAVT-EEQVARLMEMGFSRMDAQEALRASNNDI 340

Query:   279 NAATNILLE 287
             N ATN LL+
Sbjct:   341 NIATNFLLQ 349


>MGI|MGI:1916139 [details] [associations]
            symbol:Ubac2 "ubiquitin associated domain containing 2"
            species:10090 "Mus musculus" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0008150 "biological_process" evidence=ND] [GO:0016020
            "membrane" evidence=IEA] [GO:0016021 "integral to membrane"
            evidence=IEA] InterPro:IPR000449 InterPro:IPR009060 Pfam:PF00627
            MGI:MGI:1916139 GO:GO:0016021 InterPro:IPR015940 SMART:SM00165
            PROSITE:PS50030 SUPFAM:SSF46934 HSSP:Q10256 eggNOG:NOG150916
            CTD:337867 GeneTree:ENSGT00390000000865 HOGENOM:HOG000253946
            HOVERGEN:HBG106192 OMA:LISGMCY OrthoDB:EOG4W9J4B EMBL:AK049109
            EMBL:AK158177 EMBL:AK159755 EMBL:BC024467 IPI:IPI00153390
            RefSeq:NP_081137.2 UniGene:Mm.441151 ProteinModelPortal:Q8R1K1
            SMR:Q8R1K1 PhosphoSite:Q8R1K1 PaxDb:Q8R1K1 PRIDE:Q8R1K1
            Ensembl:ENSMUST00000039803 GeneID:68889 KEGG:mmu:68889
            UCSC:uc007vao.1 InParanoid:Q8R1K1 NextBio:328121 Bgee:Q8R1K1
            CleanEx:MM_UBAC2 Genevestigator:Q8R1K1 Uniprot:Q8R1K1
        Length = 345

 Score = 197 (74.4 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
 Identities = 61/233 (26%), Positives = 111/233 (47%)

Query:     4 GPSGFNNAPVTRAFVIA-CALFTVFFGIQGRFNKLGL-SYQDIFQNFRLWRLIVSGFAFS 61
             G SG   AP++++ ++   AL  +   +     K  +     +  + ++WRLI       
Sbjct:     6 GSSGLYKAPLSKSLLLVPSALSLLLTLLLPHCQKFFVYDLHAVKHDLQIWRLICGRIICL 65

Query:    62 SAPELMFGLYLLYYFRVFERQIGSNKYSVFILFSITVSFLFEVLTLALLK-----DPAMK 116
                +      L+Y FR+FER+ GS K++ F+L S  +S LF+ + +  ++       A  
Sbjct:    66 DLKDAFCSGLLIYNFRIFERRYGSRKFASFLLGSWVLSALFDFILVEAVQYSLGVTVASN 125

Query:   117 LTSGPYGLIFASFVPFYFDIPVSTRFRVFG-VHFSDKSFIYLAGLQLLISSLNRSLLPGM 175
             L SG    +FA FVPF+  IP     ++ G +  ++K+ IY+ GLQL  S  +   +  M
Sbjct:   126 LPSGFLAPVFALFVPFHCSIPRVQVAQILGPLSITNKTLIYILGLQLFTSG-SYIWIVAM 184

Query:   176 CGILAGSLYRPNFFRIRKA-KFPEFITSFFSRLSLPSMGNP-PAAPSRNVLGS 226
              G+++G  Y     ++ +  + P  +  FFS    P   +  P + +R  +G+
Sbjct:   185 SGLISGMCYDRKVLQVHQVLRIPGRMAEFFSWALEPIFSSSEPTSEARVGMGA 237

 Score = 99 (39.9 bits), Expect = 2.9e-21, Sum P(2) = 2.9e-21
 Identities = 27/73 (36%), Positives = 37/73 (50%)

Query:   215 PPAAPSRNVLGSIPSHAGRQAESNYPLPVPSTIEPPEDSIAMLVSMGFDRNSARQALVQA 274
             PP    RN    I    G ++E     P    +E  E+ +A L+ MGF R  A +AL  +
Sbjct:   280 PPLRQRRN----INYQDGPRSEQRASPP----LEVSEEQVARLMEMGFSRGDALEALRAS 331

Query:   275 RNDINAATNILLE 287
              ND+N ATN LL+
Sbjct:   332 NNDLNVATNFLLQ 344


>POMBASE|SPAC1486.02c [details] [associations]
            symbol:dsc2 "Golgi Dsc E3 ligase complex subunit Dsc2"
            species:4896 "Schizosaccharomyces pombe" [GO:0000139 "Golgi
            membrane" evidence=IEA] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016021 "integral to membrane" evidence=IEA]
            UniPathway:UPA00143 PomBase:SPAC1486.02c GO:GO:0016021
            GO:GO:0000139 EMBL:CU329670 GO:GO:0016020 GenomeReviews:CU329670_GR
            GO:GO:0016567 PROSITE:PS50030 PIR:T50071 RefSeq:NP_594090.1
            ProteinModelPortal:Q9UTK7 EnsemblFungi:SPAC1486.02c.1
            GeneID:2542884 KEGG:spo:SPAC1486.02c eggNOG:NOG150916
            OrthoDB:EOG4HHSBM NextBio:20803924 Uniprot:Q9UTK7
        Length = 372

 Score = 147 (56.8 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
 Identities = 39/181 (21%), Positives = 88/181 (48%)

Query:     9 NNAPVTRAFVIACALFTVFFGIQGRFNKLGLSYQ-DIFQNFRLWRLIVSGFAFSSAPELM 67
             +N  +T+  ++  +  +V  G+        +++   +  +++ WR+++  F + ++ E+ 
Sbjct:     9 SNMGITKFLLLTISTSSVVAGVFALKPFFHINFGLHLLSHYQYWRILLWQFIYWNSTEVF 68

Query:    68 FGLYLLYYFRVFERQIGSNKYSVFILF----SITVSFLFEVLTLALLKDPAMKLTSGPYG 123
               L+++Y  R  ER +GS++++ F ++     + V+ +F  L   L K+    +  GP  
Sbjct:    69 QALFIIYQARDVERLLGSHRFASFCVYMFILGMFVTPIFSFLYSLLFKNLDY-IQPGPTF 127

Query:   124 LIFASFVPFYFDIPVSTRFRVFGVHFSDKSFIYLAGLQLLISSLNRSLLPGMCGILAGSL 183
             LIFA    +Y+ +P +   R+F + F+DK  + +  + L  S    + +    G   G  
Sbjct:   128 LIFAILYQYYYIVPSTVFVRLFNIKFTDKFQMVIPMIGLAFSHFPSTFINAFLGWTMGMF 187

Query:   184 Y 184
             Y
Sbjct:   188 Y 188

 Score = 48 (22.0 bits), Expect = 6.3e-09, Sum P(2) = 6.3e-09
 Identities = 15/37 (40%), Positives = 18/37 (48%)

Query:   251 EDSIAMLVSMGFDRNSARQALVQARNDINAATNILLE 287
             ED   +   M   R  A QAL Q  ND+  A  +LLE
Sbjct:   332 EDINTVQTIMQTSRAQAIQALSQT-NDVQRAVELLLE 367


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.328   0.142   0.427    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      291       291   0.00089  115 3  11 22  0.42    33
                                                     33  0.43    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  176 KB (2102 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.84u 0.10s 24.94t   Elapsed:  00:00:01
  Total cpu time:  24.85u 0.10s 24.95t   Elapsed:  00:00:01
  Start:  Sat May 11 07:12:41 2013   End:  Sat May 11 07:12:42 2013

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