Query 047406
Match_columns 290
No_of_seqs 174 out of 2289
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 18:58:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047406.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047406hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g07_A 7SK snRNA methylphospha 100.0 4.8E-31 1.6E-35 242.5 13.7 257 23-290 9-286 (292)
2 4gek_A TRNA (CMO5U34)-methyltr 99.8 2.1E-18 7.3E-23 156.7 15.4 112 57-223 65-178 (261)
3 3f4k_A Putative methyltransfer 99.8 1.2E-17 4.2E-22 147.9 15.2 153 60-271 44-196 (257)
4 3jwg_A HEN1, methyltransferase 99.7 3.2E-17 1.1E-21 142.3 16.5 173 61-290 28-209 (219)
5 3dlc_A Putative S-adenosyl-L-m 99.7 2.6E-17 9E-22 141.2 15.2 150 64-271 45-203 (219)
6 3kkz_A Uncharacterized protein 99.7 2E-17 6.9E-22 148.2 15.0 153 60-271 44-196 (267)
7 3l8d_A Methyltransferase; stru 99.7 4.5E-17 1.5E-21 142.8 16.2 158 51-270 42-199 (242)
8 1nkv_A Hypothetical protein YJ 99.7 1.3E-17 4.5E-22 147.6 12.7 151 61-270 35-186 (256)
9 3d2l_A SAM-dependent methyltra 99.7 5.7E-17 1.9E-21 142.0 15.0 133 33-224 5-138 (243)
10 3jwh_A HEN1; methyltransferase 99.7 1.1E-16 3.8E-21 138.9 16.0 171 61-288 28-207 (217)
11 2o57_A Putative sarcosine dime 99.7 7.7E-17 2.6E-21 146.4 15.5 153 61-270 81-233 (297)
12 3dtn_A Putative methyltransfer 99.7 9.1E-17 3.1E-21 140.6 14.7 154 60-271 42-214 (234)
13 1vl5_A Unknown conserved prote 99.7 2.5E-16 8.5E-21 140.4 17.1 150 61-270 36-189 (260)
14 3g5l_A Putative S-adenosylmeth 99.7 1.2E-16 4E-21 141.7 14.5 102 62-223 44-145 (253)
15 3mgg_A Methyltransferase; NYSG 99.7 2.3E-16 7.8E-21 141.6 16.4 153 61-270 36-197 (276)
16 3dh0_A SAM dependent methyltra 99.7 1.9E-16 6.6E-21 137.0 15.2 145 61-271 36-181 (219)
17 3bus_A REBM, methyltransferase 99.7 1.5E-16 5.3E-21 142.3 14.8 154 61-271 60-216 (273)
18 3vc1_A Geranyl diphosphate 2-C 99.7 1.3E-16 4.3E-21 146.9 14.5 154 60-271 115-269 (312)
19 2p7i_A Hypothetical protein; p 99.7 1.4E-16 4.7E-21 139.1 13.7 146 61-270 41-198 (250)
20 3cgg_A SAM-dependent methyltra 99.7 3.1E-16 1.1E-20 131.9 15.2 155 55-290 39-194 (195)
21 1ve3_A Hypothetical protein PH 99.7 3.1E-16 1.1E-20 135.9 15.6 116 54-226 30-145 (227)
22 3ocj_A Putative exported prote 99.7 1.8E-16 6.3E-21 145.3 14.9 115 56-223 112-227 (305)
23 3ujc_A Phosphoethanolamine N-m 99.7 1.1E-16 3.7E-21 141.8 12.9 151 61-271 54-206 (266)
24 1y8c_A S-adenosylmethionine-de 99.7 2.9E-16 9.8E-21 137.3 15.1 107 61-224 36-143 (246)
25 4htf_A S-adenosylmethionine-de 99.7 1.6E-16 5.5E-21 143.6 13.9 154 61-271 67-232 (285)
26 3hem_A Cyclopropane-fatty-acyl 99.7 7.8E-16 2.7E-20 140.6 17.7 157 61-271 71-243 (302)
27 3dli_A Methyltransferase; PSI- 99.7 3.3E-16 1.1E-20 138.2 14.7 147 57-271 36-184 (240)
28 3h2b_A SAM-dependent methyltra 99.7 1.1E-16 3.7E-21 137.2 10.9 141 62-271 41-182 (203)
29 3i53_A O-methyltransferase; CO 99.7 8.3E-16 2.8E-20 142.6 17.0 154 61-271 168-321 (332)
30 2a14_A Indolethylamine N-methy 99.7 1.1E-16 3.7E-21 144.3 10.6 180 61-271 54-238 (263)
31 2ex4_A Adrenal gland protein A 99.7 3.5E-16 1.2E-20 138.1 13.3 147 62-271 79-225 (241)
32 3e23_A Uncharacterized protein 99.7 2.6E-16 9E-21 135.8 12.2 151 50-271 31-182 (211)
33 3sm3_A SAM-dependent methyltra 99.7 3.9E-16 1.3E-20 135.5 13.2 167 54-271 22-207 (235)
34 1kpg_A CFA synthase;, cyclopro 99.7 1.1E-15 3.7E-20 138.1 16.5 153 61-271 63-228 (287)
35 3pfg_A N-methyltransferase; N, 99.7 4.6E-16 1.6E-20 138.9 13.8 108 55-223 43-151 (263)
36 3hnr_A Probable methyltransfer 99.7 5.2E-16 1.8E-20 134.3 13.5 149 61-271 44-201 (220)
37 1xxl_A YCGJ protein; structura 99.7 1.3E-15 4.3E-20 134.7 15.9 152 60-270 19-173 (239)
38 3dp7_A SAM-dependent methyltra 99.7 1.8E-15 6.1E-20 142.7 17.0 156 61-271 178-342 (363)
39 1xtp_A LMAJ004091AAA; SGPP, st 99.7 8.1E-16 2.8E-20 135.7 13.5 147 61-271 92-238 (254)
40 3lcc_A Putative methyl chlorid 99.7 1.1E-15 3.9E-20 134.1 13.9 143 61-271 65-207 (235)
41 3g2m_A PCZA361.24; SAM-depende 99.6 1.3E-15 4.5E-20 138.9 14.0 119 53-225 72-192 (299)
42 2p35_A Trans-aconitate 2-methy 99.6 8.4E-16 2.9E-20 136.0 12.1 103 61-225 32-134 (259)
43 4fsd_A Arsenic methyltransfera 99.6 1.3E-15 4.3E-20 144.9 14.1 164 60-271 81-251 (383)
44 1ri5_A MRNA capping enzyme; me 99.6 2E-15 6.8E-20 136.0 14.7 115 59-225 61-176 (298)
45 3bxo_A N,N-dimethyltransferase 99.6 2E-15 7E-20 131.7 14.3 107 56-223 34-141 (239)
46 3gu3_A Methyltransferase; alph 99.6 2.2E-15 7.7E-20 136.8 14.7 108 61-226 21-129 (284)
47 2fk8_A Methoxy mycolic acid sy 99.6 4.4E-15 1.5E-19 136.4 16.4 152 61-270 89-253 (318)
48 2b3t_A Protein methyltransfera 99.6 5.6E-15 1.9E-19 133.8 16.8 179 18-271 57-263 (276)
49 2r3s_A Uncharacterized protein 99.6 6.7E-15 2.3E-19 135.7 17.1 155 61-271 164-323 (335)
50 2g72_A Phenylethanolamine N-me 99.6 1.3E-15 4.4E-20 138.4 11.8 196 61-289 70-277 (289)
51 3thr_A Glycine N-methyltransfe 99.6 3E-15 1E-19 135.4 14.0 117 61-225 56-177 (293)
52 3gwz_A MMCR; methyltransferase 99.6 5.6E-15 1.9E-19 139.7 16.1 153 61-270 201-355 (369)
53 3ou2_A SAM-dependent methyltra 99.6 4.6E-15 1.6E-19 127.5 14.2 107 57-224 41-147 (218)
54 3bkw_A MLL3908 protein, S-aden 99.6 4.7E-15 1.6E-19 129.7 14.4 103 61-223 42-144 (243)
55 3kr9_A SAM-dependent methyltra 99.6 4.6E-15 1.6E-19 132.8 14.2 137 51-268 4-140 (225)
56 2i62_A Nicotinamide N-methyltr 99.6 1.9E-15 6.7E-20 133.8 11.7 181 61-271 55-239 (265)
57 1pjz_A Thiopurine S-methyltran 99.6 1.8E-15 6.1E-20 131.4 11.0 155 61-271 21-176 (203)
58 3ccf_A Cyclopropane-fatty-acyl 99.6 3E-15 1E-19 135.1 12.8 144 61-269 56-208 (279)
59 3mcz_A O-methyltransferase; ad 99.6 4.5E-15 1.6E-19 138.3 14.3 154 61-268 177-336 (352)
60 3e8s_A Putative SAM dependent 99.6 3.7E-15 1.3E-19 128.4 11.8 146 61-271 51-209 (227)
61 1qzz_A RDMB, aclacinomycin-10- 99.6 1.2E-14 4.2E-19 136.3 16.1 154 61-271 181-339 (374)
62 3lec_A NADB-rossmann superfami 99.6 8.6E-15 2.9E-19 131.4 14.0 140 49-269 8-147 (230)
63 2yqz_A Hypothetical protein TT 99.6 5.2E-15 1.8E-19 130.9 12.4 105 59-222 36-140 (263)
64 3grz_A L11 mtase, ribosomal pr 99.6 8.9E-15 3.1E-19 125.8 13.4 137 54-274 52-188 (205)
65 1wzn_A SAM-dependent methyltra 99.6 2.4E-14 8.2E-19 126.5 16.0 108 61-226 40-148 (252)
66 3ege_A Putative methyltransfer 99.6 4.4E-15 1.5E-19 133.0 11.0 151 53-271 23-178 (261)
67 2vdw_A Vaccinia virus capping 99.6 1.2E-14 4E-19 134.7 14.1 117 62-225 48-171 (302)
68 3gnl_A Uncharacterized protein 99.6 1.4E-14 4.8E-19 131.1 14.1 138 49-267 8-145 (244)
69 2ip2_A Probable phenazine-spec 99.6 1.4E-14 4.8E-19 134.1 13.9 151 64-271 169-322 (334)
70 3e05_A Precorrin-6Y C5,15-meth 99.6 5E-14 1.7E-18 121.2 16.3 106 60-224 38-143 (204)
71 3g5t_A Trans-aconitate 3-methy 99.6 1.3E-14 4.5E-19 132.3 13.3 114 53-221 26-147 (299)
72 4a6d_A Hydroxyindole O-methylt 99.6 5.3E-14 1.8E-18 132.5 17.8 153 61-271 178-334 (353)
73 1yzh_A TRNA (guanine-N(7)-)-me 99.6 3E-14 1E-18 123.8 14.8 113 62-224 41-157 (214)
74 3i9f_A Putative type 11 methyl 99.6 4.9E-15 1.7E-19 123.4 9.1 133 61-271 16-148 (170)
75 1af7_A Chemotaxis receptor met 99.6 2.9E-15 9.8E-20 137.5 8.2 137 62-224 105-253 (274)
76 1vlm_A SAM-dependent methyltra 99.6 3.2E-14 1.1E-18 123.9 14.3 147 54-271 40-188 (219)
77 2xvm_A Tellurite resistance pr 99.6 3.6E-14 1.2E-18 120.2 14.2 143 61-271 31-173 (199)
78 2kw5_A SLR1183 protein; struct 99.6 7.8E-14 2.7E-18 119.2 16.3 151 51-270 19-170 (202)
79 3hm2_A Precorrin-6Y C5,15-meth 99.6 2.2E-14 7.6E-19 119.6 12.5 105 61-224 24-128 (178)
80 3cc8_A Putative methyltransfer 99.6 2.8E-14 9.4E-19 123.1 13.4 146 61-271 31-185 (230)
81 1x19_A CRTF-related protein; m 99.6 7.1E-14 2.4E-18 131.0 16.8 154 61-271 189-348 (359)
82 1tw3_A COMT, carminomycin 4-O- 99.6 5.7E-14 1.9E-18 131.3 16.0 154 61-271 182-339 (360)
83 1xdz_A Methyltransferase GIDB; 99.6 2.8E-14 9.5E-19 126.5 13.1 129 61-269 69-200 (240)
84 4hg2_A Methyltransferase type 99.6 5.7E-15 2E-19 134.0 8.9 107 52-223 29-135 (257)
85 3bkx_A SAM-dependent methyltra 99.6 3.7E-14 1.3E-18 126.8 14.0 157 60-271 41-219 (275)
86 3evz_A Methyltransferase; NYSG 99.6 1.6E-13 5.4E-18 119.8 16.9 142 57-270 50-205 (230)
87 3lpm_A Putative methyltransfer 99.5 7E-14 2.4E-18 125.4 14.8 137 62-270 49-200 (259)
88 3g89_A Ribosomal RNA small sub 99.5 3.9E-14 1.3E-18 127.5 13.1 132 61-271 79-212 (249)
89 4e2x_A TCAB9; kijanose, tetron 99.5 4.2E-15 1.4E-19 141.9 7.1 146 61-270 106-252 (416)
90 1jsx_A Glucose-inhibited divis 99.5 2.9E-14 1E-18 122.3 11.6 102 62-224 65-166 (207)
91 1zx0_A Guanidinoacetate N-meth 99.5 2.1E-14 7.1E-19 126.6 10.9 109 61-222 59-169 (236)
92 3mti_A RRNA methylase; SAM-dep 99.5 4E-14 1.4E-18 119.6 12.1 117 56-223 16-135 (185)
93 3htx_A HEN1; HEN1, small RNA m 99.5 1.5E-13 5.2E-18 142.0 18.2 180 61-290 720-916 (950)
94 3orh_A Guanidinoacetate N-meth 99.5 7.5E-15 2.6E-19 130.6 7.6 110 61-222 59-169 (236)
95 2aot_A HMT, histamine N-methyl 99.5 5.1E-14 1.7E-18 128.3 12.9 154 61-270 51-220 (292)
96 3bgv_A MRNA CAP guanine-N7 met 99.5 8.4E-14 2.9E-18 127.9 14.3 120 61-225 33-157 (313)
97 3m70_A Tellurite resistance pr 99.5 1.1E-13 3.7E-18 125.0 14.6 141 61-270 119-259 (286)
98 2nxc_A L11 mtase, ribosomal pr 99.5 5.2E-14 1.8E-18 126.6 12.2 134 53-271 111-244 (254)
99 2pxx_A Uncharacterized protein 99.5 1.2E-13 4E-18 118.2 13.8 119 53-224 33-160 (215)
100 3njr_A Precorrin-6Y methylase; 99.5 6E-13 2E-17 115.8 18.0 127 60-270 53-179 (204)
101 3m33_A Uncharacterized protein 99.5 7.7E-14 2.6E-18 122.3 12.4 121 58-269 44-165 (226)
102 2gb4_A Thiopurine S-methyltran 99.5 3.9E-14 1.3E-18 127.9 10.7 159 61-270 67-226 (252)
103 1nv8_A HEMK protein; class I a 99.5 1.1E-13 3.9E-18 126.9 13.8 152 19-224 71-250 (284)
104 2fca_A TRNA (guanine-N(7)-)-me 99.5 1.4E-13 4.8E-18 120.4 13.7 113 62-224 38-154 (213)
105 3lst_A CALO1 methyltransferase 99.5 5.7E-14 1.9E-18 131.4 11.9 151 61-271 183-336 (348)
106 3ggd_A SAM-dependent methyltra 99.5 8.1E-14 2.8E-18 122.8 12.0 112 53-223 47-163 (245)
107 2gs9_A Hypothetical protein TT 99.5 7.1E-14 2.4E-18 120.2 11.1 107 55-226 29-135 (211)
108 3ofk_A Nodulation protein S; N 99.5 5.3E-14 1.8E-18 121.5 9.7 106 61-224 50-155 (216)
109 3reo_A (ISO)eugenol O-methyltr 99.5 2E-13 7E-18 129.1 14.2 146 61-271 202-355 (368)
110 4dzr_A Protein-(glutamine-N5) 99.5 9.4E-15 3.2E-19 124.8 4.4 138 61-271 29-192 (215)
111 3bzb_A Uncharacterized protein 99.5 2.8E-13 9.7E-18 123.5 14.3 177 28-274 46-240 (281)
112 3eey_A Putative rRNA methylase 99.5 1.9E-13 6.4E-18 116.6 12.2 116 58-223 18-139 (197)
113 3p9c_A Caffeic acid O-methyltr 99.5 2.8E-13 9.6E-18 128.1 14.3 146 61-271 200-353 (364)
114 1nt2_A Fibrillarin-like PRE-rR 99.5 5.6E-13 1.9E-17 116.8 14.7 134 61-271 56-195 (210)
115 2p8j_A S-adenosylmethionine-de 99.5 3.4E-13 1.2E-17 115.4 13.1 111 58-224 19-129 (209)
116 3p9n_A Possible methyltransfer 99.5 2E-13 6.9E-18 116.2 11.0 109 61-224 43-154 (189)
117 3mq2_A 16S rRNA methyltransfer 99.5 2.1E-13 7.1E-18 118.3 10.8 112 61-223 26-140 (218)
118 2qe6_A Uncharacterized protein 99.5 3.3E-13 1.1E-17 123.0 12.3 107 63-224 78-197 (274)
119 3ntv_A MW1564 protein; rossman 99.5 2.2E-13 7.4E-18 120.4 10.5 109 61-226 70-179 (232)
120 3fpf_A Mtnas, putative unchara 99.5 4.5E-13 1.5E-17 124.4 12.9 104 59-223 119-222 (298)
121 1dus_A MJ0882; hypothetical pr 99.5 7.5E-13 2.5E-17 110.9 12.7 107 61-224 51-158 (194)
122 2ozv_A Hypothetical protein AT 99.4 6.6E-13 2.2E-17 119.8 13.2 119 61-224 35-171 (260)
123 3dxy_A TRNA (guanine-N(7)-)-me 99.4 2.1E-13 7.2E-18 120.3 9.4 114 62-224 34-151 (218)
124 3u81_A Catechol O-methyltransf 99.4 8.2E-13 2.8E-17 115.4 12.8 111 61-226 57-173 (221)
125 1fp2_A Isoflavone O-methyltran 99.4 6.6E-13 2.2E-17 124.2 12.9 147 60-271 186-341 (352)
126 1l3i_A Precorrin-6Y methyltran 99.4 9E-13 3.1E-17 110.3 12.3 105 60-224 31-135 (192)
127 3tfw_A Putative O-methyltransf 99.4 5.9E-13 2E-17 119.0 11.7 110 61-227 62-174 (248)
128 3p2e_A 16S rRNA methylase; met 99.4 1.4E-13 4.9E-18 121.9 7.3 156 61-269 23-183 (225)
129 1fbn_A MJ fibrillarin homologu 99.4 1.5E-12 5.2E-17 114.5 13.8 138 61-271 73-213 (230)
130 4df3_A Fibrillarin-like rRNA/T 99.4 2.2E-12 7.5E-17 115.9 14.9 140 60-271 75-217 (233)
131 2ipx_A RRNA 2'-O-methyltransfe 99.4 1.5E-12 5.1E-17 114.5 13.4 140 60-271 75-217 (233)
132 3mb5_A SAM-dependent methyltra 99.4 1E-12 3.6E-17 116.5 12.3 129 60-271 91-222 (255)
133 2esr_A Methyltransferase; stru 99.4 3.7E-13 1.3E-17 112.8 8.7 108 61-224 30-139 (177)
134 3q87_B N6 adenine specific DNA 99.4 8.8E-13 3E-17 111.3 11.0 125 61-271 22-149 (170)
135 2gpy_A O-methyltransferase; st 99.4 5.4E-13 1.8E-17 117.1 10.0 110 61-227 53-164 (233)
136 1fp1_D Isoliquiritigenin 2'-O- 99.4 5E-13 1.7E-17 126.1 10.5 145 61-270 208-359 (372)
137 3tr6_A O-methyltransferase; ce 99.4 3.7E-13 1.3E-17 117.0 8.6 110 61-227 63-178 (225)
138 3dmg_A Probable ribosomal RNA 99.4 6.7E-13 2.3E-17 126.9 11.1 141 62-271 233-373 (381)
139 2frn_A Hypothetical protein PH 99.4 1.7E-12 6E-17 118.2 13.2 107 56-223 119-225 (278)
140 3tma_A Methyltransferase; thum 99.4 3.2E-12 1.1E-16 119.9 15.1 116 59-224 200-318 (354)
141 3fzg_A 16S rRNA methylase; met 99.4 3E-13 1E-17 118.5 7.1 107 59-223 46-152 (200)
142 3c3p_A Methyltransferase; NP_9 99.4 6.5E-13 2.2E-17 114.8 9.2 108 61-226 55-163 (210)
143 3duw_A OMT, O-methyltransferas 99.4 7.7E-13 2.6E-17 115.0 9.7 110 61-227 57-171 (223)
144 1o9g_A RRNA methyltransferase; 99.4 6.5E-13 2.2E-17 118.1 9.4 140 62-225 51-216 (250)
145 2yxd_A Probable cobalt-precorr 99.4 3.4E-12 1.2E-16 106.2 13.1 99 61-224 34-132 (183)
146 3dr5_A Putative O-methyltransf 99.4 6.6E-13 2.3E-17 117.3 9.2 106 64-226 58-166 (221)
147 4dcm_A Ribosomal RNA large sub 99.4 1.9E-12 6.5E-17 123.4 13.0 113 62-225 222-336 (375)
148 2h00_A Methyltransferase 10 do 99.4 2.7E-13 9.1E-18 120.6 6.5 113 62-222 65-191 (254)
149 3q7e_A Protein arginine N-meth 99.4 1.5E-12 5E-17 122.5 11.2 109 60-222 64-172 (349)
150 1o54_A SAM-dependent O-methylt 99.4 3.7E-12 1.3E-16 115.0 13.1 128 61-271 111-239 (277)
151 3ckk_A TRNA (guanine-N(7)-)-me 99.4 1.7E-12 5.7E-17 115.9 10.5 121 61-224 45-169 (235)
152 1yb2_A Hypothetical protein TA 99.4 2E-12 6.8E-17 117.0 11.1 127 60-270 108-236 (275)
153 2avn_A Ubiquinone/menaquinone 99.4 1.6E-12 5.5E-17 116.0 10.3 107 56-225 48-154 (260)
154 2ift_A Putative methylase HI07 99.4 1.6E-12 5.4E-17 112.5 9.6 109 61-225 52-165 (201)
155 3lbf_A Protein-L-isoaspartate 99.4 2.3E-12 7.7E-17 110.9 10.3 101 61-225 76-176 (210)
156 2zfu_A Nucleomethylin, cerebra 99.4 2.2E-12 7.4E-17 111.4 9.7 114 61-271 66-179 (215)
157 3id6_C Fibrillarin-like rRNA/T 99.3 1.6E-11 5.3E-16 110.2 15.2 139 60-271 74-216 (232)
158 2pwy_A TRNA (adenine-N(1)-)-me 99.3 5.2E-12 1.8E-16 111.6 11.9 105 60-224 94-199 (258)
159 3iv6_A Putative Zn-dependent a 99.3 1.7E-12 5.9E-17 118.3 9.0 106 61-224 44-149 (261)
160 3uwp_A Histone-lysine N-methyl 99.3 2.5E-12 8.4E-17 124.5 10.4 114 60-222 171-287 (438)
161 1sui_A Caffeoyl-COA O-methyltr 99.3 2.2E-12 7.7E-17 115.6 9.5 109 61-226 78-193 (247)
162 3r0q_C Probable protein argini 99.3 2.3E-12 7.8E-17 122.5 10.1 109 60-223 61-169 (376)
163 2fhp_A Methylase, putative; al 99.3 1.3E-12 4.4E-17 109.7 7.4 109 61-225 43-156 (187)
164 1zg3_A Isoflavanone 4'-O-methy 99.3 3.9E-12 1.3E-16 119.2 11.4 147 60-271 191-347 (358)
165 1g8a_A Fibrillarin-like PRE-rR 99.3 1.3E-11 4.5E-16 107.6 13.9 104 60-222 71-177 (227)
166 1p91_A Ribosomal RNA large sub 99.3 1.4E-12 4.7E-17 116.6 7.7 98 61-226 84-181 (269)
167 2fpo_A Methylase YHHF; structu 99.3 3.9E-12 1.3E-16 110.1 10.1 106 62-224 54-161 (202)
168 3bwc_A Spermidine synthase; SA 99.3 5.9E-12 2E-16 116.4 11.9 143 61-271 94-240 (304)
169 2hnk_A SAM-dependent O-methylt 99.3 3.3E-12 1.1E-16 112.8 9.6 109 61-226 59-184 (239)
170 3r3h_A O-methyltransferase, SA 99.3 5.7E-13 2E-17 119.1 4.5 109 61-226 59-173 (242)
171 2fyt_A Protein arginine N-meth 99.3 7.6E-12 2.6E-16 117.4 12.2 108 60-221 62-169 (340)
172 3c3y_A Pfomt, O-methyltransfer 99.3 5.6E-12 1.9E-16 112.0 10.5 109 61-226 69-184 (237)
173 2b25_A Hypothetical protein; s 99.3 7.4E-12 2.5E-16 116.4 11.7 116 60-224 103-220 (336)
174 3hp7_A Hemolysin, putative; st 99.3 1.5E-12 5.1E-17 120.6 6.6 144 61-271 84-232 (291)
175 1ws6_A Methyltransferase; stru 99.3 9.9E-13 3.4E-17 108.6 4.8 104 62-225 41-149 (171)
176 3b3j_A Histone-arginine methyl 99.3 3.6E-12 1.2E-16 125.3 9.4 107 61-223 157-263 (480)
177 1i1n_A Protein-L-isoaspartate 99.3 9.3E-12 3.2E-16 108.4 10.7 110 59-225 74-184 (226)
178 2vdv_E TRNA (guanine-N(7)-)-me 99.3 1.2E-11 4E-16 110.0 11.3 123 61-224 48-174 (246)
179 1ixk_A Methyltransferase; open 99.3 2.5E-11 8.7E-16 112.6 14.0 115 60-224 116-247 (315)
180 2pjd_A Ribosomal RNA small sub 99.3 6E-12 2.1E-16 117.8 9.8 110 62-225 196-305 (343)
181 3gdh_A Trimethylguanosine synt 99.3 4.4E-13 1.5E-17 117.9 1.6 104 61-222 77-180 (241)
182 1dl5_A Protein-L-isoaspartate 99.3 9.5E-12 3.3E-16 115.1 10.7 104 60-225 73-177 (317)
183 2yxe_A Protein-L-isoaspartate 99.3 1.1E-11 3.9E-16 106.8 10.4 104 60-225 75-179 (215)
184 3adn_A Spermidine synthase; am 99.3 8.1E-12 2.8E-16 115.4 10.0 114 61-223 82-198 (294)
185 2pbf_A Protein-L-isoaspartate 99.3 7.8E-12 2.7E-16 108.9 9.3 106 59-224 77-194 (227)
186 2avd_A Catechol-O-methyltransf 99.3 6.9E-12 2.3E-16 109.3 8.3 109 61-226 68-182 (229)
187 1g6q_1 HnRNP arginine N-methyl 99.3 1.7E-11 5.7E-16 114.3 11.3 108 60-221 36-143 (328)
188 1inl_A Spermidine synthase; be 99.3 1E-11 3.5E-16 114.5 9.6 117 61-224 89-206 (296)
189 1vbf_A 231AA long hypothetical 99.3 1.2E-11 4.1E-16 107.8 9.5 99 61-225 69-167 (231)
190 3cbg_A O-methyltransferase; cy 99.3 7.1E-12 2.4E-16 110.7 8.1 109 61-226 71-185 (232)
191 1r18_A Protein-L-isoaspartate( 99.3 1.2E-11 4E-16 108.3 8.8 110 59-225 81-196 (227)
192 3opn_A Putative hemolysin; str 99.3 2.7E-12 9.2E-17 114.6 4.6 44 61-105 36-79 (232)
193 1u2z_A Histone-lysine N-methyl 99.3 2E-11 6.7E-16 118.8 11.1 108 60-222 240-358 (433)
194 3a27_A TYW2, uncharacterized p 99.3 2.4E-11 8.1E-16 110.4 10.9 106 58-224 115-220 (272)
195 1jg1_A PIMT;, protein-L-isoasp 99.3 2.2E-11 7.6E-16 107.2 10.3 103 60-225 89-191 (235)
196 2qm3_A Predicted methyltransfe 99.2 1.5E-10 5.2E-15 109.6 16.3 107 61-224 171-279 (373)
197 1i9g_A Hypothetical protein RV 99.2 5.2E-11 1.8E-15 106.9 12.4 107 60-224 97-204 (280)
198 2y1w_A Histone-arginine methyl 99.2 2.4E-11 8.3E-16 114.1 10.5 107 61-223 49-155 (348)
199 2o07_A Spermidine synthase; st 99.2 1.5E-11 5.1E-16 114.0 8.8 137 61-245 94-232 (304)
200 1iy9_A Spermidine synthase; ro 99.2 2E-11 6.8E-16 111.4 9.0 114 61-224 74-190 (275)
201 3tm4_A TRNA (guanine N2-)-meth 99.2 9.7E-11 3.3E-15 111.1 14.1 133 60-268 215-349 (373)
202 2plw_A Ribosomal RNA methyltra 99.2 1.6E-11 5.4E-16 104.7 7.6 37 60-96 20-58 (201)
203 3v97_A Ribosomal RNA large sub 99.2 6E-11 2E-15 121.6 13.0 117 59-224 536-658 (703)
204 2yvl_A TRMI protein, hypotheti 99.2 1.2E-10 4E-15 102.2 12.6 102 61-224 90-191 (248)
205 2i7c_A Spermidine synthase; tr 99.2 2.1E-11 7.3E-16 111.5 7.9 114 61-224 77-193 (283)
206 3ajd_A Putative methyltransfer 99.2 6.5E-11 2.2E-15 107.4 11.0 114 61-224 82-212 (274)
207 2pt6_A Spermidine synthase; tr 99.2 1.8E-11 6.2E-16 114.2 7.3 114 61-224 115-231 (321)
208 1xj5_A Spermidine synthase 1; 99.2 3.3E-11 1.1E-15 113.3 9.1 118 61-228 119-241 (334)
209 2b2c_A Spermidine synthase; be 99.2 1.7E-11 5.8E-16 114.3 7.0 114 61-224 107-223 (314)
210 2igt_A SAM dependent methyltra 99.2 5.7E-11 1.9E-15 111.4 10.5 114 61-224 152-273 (332)
211 3giw_A Protein of unknown func 99.2 5.7E-11 1.9E-15 109.2 10.1 149 64-267 80-243 (277)
212 1mjf_A Spermidine synthase; sp 99.2 1.7E-11 5.9E-16 111.9 6.4 118 61-223 74-193 (281)
213 4hc4_A Protein arginine N-meth 99.2 6.3E-11 2.2E-15 113.3 10.4 108 59-221 80-187 (376)
214 2b78_A Hypothetical protein SM 99.2 1.3E-10 4.5E-15 110.8 12.4 115 61-224 211-332 (385)
215 1ej0_A FTSJ; methyltransferase 99.2 7.2E-11 2.5E-15 96.8 8.8 102 60-223 20-136 (180)
216 2ld4_A Anamorsin; methyltransf 99.2 9.9E-12 3.4E-16 104.3 2.9 116 60-263 10-128 (176)
217 3k6r_A Putative transferase PH 99.1 3.2E-10 1.1E-14 104.2 13.0 106 56-222 119-224 (278)
218 1uir_A Polyamine aminopropyltr 99.1 4.1E-11 1.4E-15 111.2 7.0 116 61-223 76-195 (314)
219 3m6w_A RRNA methylase; rRNA me 99.1 1.6E-10 5.5E-15 113.3 11.1 115 61-225 100-231 (464)
220 1wy7_A Hypothetical protein PH 99.1 5E-10 1.7E-14 95.9 12.9 100 61-221 48-147 (207)
221 3m4x_A NOL1/NOP2/SUN family pr 99.1 1.9E-10 6.4E-15 112.5 11.5 115 61-224 104-235 (456)
222 2bm8_A Cephalosporin hydroxyla 99.1 2.8E-11 9.6E-16 107.7 4.9 100 61-223 80-187 (236)
223 2yxl_A PH0851 protein, 450AA l 99.1 9.3E-10 3.2E-14 106.9 15.5 116 60-224 257-390 (450)
224 3lcv_B Sisomicin-gentamicin re 99.1 5.8E-10 2E-14 102.0 13.1 142 60-270 130-271 (281)
225 3gjy_A Spermidine synthase; AP 99.1 7.9E-11 2.7E-15 110.2 7.5 108 64-224 91-201 (317)
226 2as0_A Hypothetical protein PH 99.1 3.2E-10 1.1E-14 108.0 11.7 113 62-223 217-335 (396)
227 1ne2_A Hypothetical protein TA 99.1 5.1E-10 1.7E-14 95.7 11.7 96 61-222 50-145 (200)
228 4azs_A Methyltransferase WBDD; 99.1 1.1E-10 3.8E-15 116.5 8.4 108 59-221 63-171 (569)
229 3dou_A Ribosomal RNA large sub 99.1 1.7E-09 6E-14 93.2 13.8 101 60-223 23-139 (191)
230 2nyu_A Putative ribosomal RNA 99.1 2.8E-10 9.6E-15 96.3 8.4 103 60-223 20-145 (196)
231 1wxx_A TT1595, hypothetical pr 99.1 2.5E-10 8.6E-15 108.4 8.9 110 62-224 209-326 (382)
232 3c0k_A UPF0064 protein YCCW; P 99.1 3.8E-10 1.3E-14 107.6 9.5 116 60-224 218-340 (396)
233 1uwv_A 23S rRNA (uracil-5-)-me 99.1 3.3E-09 1.1E-13 102.5 16.3 103 61-224 285-390 (433)
234 4dmg_A Putative uncharacterize 99.0 5.6E-10 1.9E-14 107.1 10.4 115 56-222 208-325 (393)
235 2yx1_A Hypothetical protein MJ 99.0 6E-10 2.1E-14 104.2 10.3 100 58-222 191-290 (336)
236 2f8l_A Hypothetical protein LM 99.0 1.8E-09 6.2E-14 100.8 12.4 111 62-224 130-257 (344)
237 2frx_A Hypothetical protein YE 99.0 1.1E-09 3.8E-14 107.6 11.5 116 62-226 117-249 (479)
238 1sqg_A SUN protein, FMU protei 99.0 1.4E-09 4.8E-14 104.8 11.3 115 61-225 245-376 (429)
239 3sso_A Methyltransferase; macr 99.0 3.7E-10 1.3E-14 108.9 6.3 97 61-223 215-324 (419)
240 1zq9_A Probable dimethyladenos 99.0 1.1E-09 3.9E-14 100.1 9.1 103 61-221 27-145 (285)
241 2okc_A Type I restriction enzy 98.9 5.4E-09 1.9E-13 101.2 12.7 162 61-290 170-356 (445)
242 2jjq_A Uncharacterized RNA met 98.9 4.4E-09 1.5E-13 101.8 11.5 100 60-224 288-388 (425)
243 3frh_A 16S rRNA methylase; met 98.9 8.3E-09 2.8E-13 93.3 12.2 103 61-223 104-206 (253)
244 2cmg_A Spermidine synthase; tr 98.9 8.2E-10 2.8E-14 100.3 5.6 100 61-223 71-171 (262)
245 2ih2_A Modification methylase 98.9 1.1E-08 3.6E-13 97.1 12.8 103 62-224 39-165 (421)
246 2oxt_A Nucleoside-2'-O-methylt 98.9 4.2E-10 1.4E-14 102.4 1.8 108 60-223 72-185 (265)
247 2wa2_A Non-structural protein 98.9 4.3E-10 1.5E-14 103.0 1.7 107 60-222 80-192 (276)
248 2dul_A N(2),N(2)-dimethylguano 98.9 3.3E-09 1.1E-13 101.2 7.9 119 62-224 47-165 (378)
249 3ldg_A Putative uncharacterize 98.9 3.3E-08 1.1E-12 94.5 14.5 115 58-224 190-344 (384)
250 2h1r_A Dimethyladenosine trans 98.9 1.5E-08 5E-13 93.4 11.7 98 61-217 41-153 (299)
251 3ldu_A Putative methylase; str 98.9 1.2E-08 4E-13 97.5 11.2 113 59-224 192-345 (385)
252 3k0b_A Predicted N6-adenine-sp 98.8 1.8E-08 6E-13 96.6 11.8 114 58-224 197-351 (393)
253 2p41_A Type II methyltransfera 98.8 1.1E-09 3.9E-14 101.5 3.1 104 60-223 80-191 (305)
254 3axs_A Probable N(2),N(2)-dime 98.8 6.8E-09 2.3E-13 99.7 8.0 105 62-224 52-159 (392)
255 2b9e_A NOL1/NOP2/SUN domain fa 98.8 1.9E-07 6.6E-12 86.7 16.2 115 60-224 100-235 (309)
256 2xyq_A Putative 2'-O-methyl tr 98.7 1.2E-08 4.2E-13 94.2 7.0 122 60-269 61-195 (290)
257 3lkd_A Type I restriction-modi 98.7 4.9E-07 1.7E-11 90.1 16.8 115 62-224 221-359 (542)
258 3khk_A Type I restriction-modi 98.7 2.3E-07 7.9E-12 92.4 14.2 113 64-224 246-396 (544)
259 2ar0_A M.ecoki, type I restric 98.7 9.8E-08 3.4E-12 95.0 11.2 120 61-224 168-313 (541)
260 3gru_A Dimethyladenosine trans 98.6 2.4E-07 8.2E-12 85.6 11.9 76 61-190 49-124 (295)
261 3bt7_A TRNA (uracil-5-)-methyl 98.6 3E-08 1E-12 93.7 5.8 45 62-108 213-257 (369)
262 1yub_A Ermam, rRNA methyltrans 98.6 3.5E-09 1.2E-13 94.2 -0.6 105 61-225 28-147 (245)
263 1qam_A ERMC' methyltransferase 98.6 1.7E-07 5.9E-12 83.6 10.2 44 61-106 29-72 (244)
264 2qfm_A Spermine synthase; sper 98.6 4E-08 1.4E-12 93.4 5.9 115 62-223 188-314 (364)
265 3v97_A Ribosomal RNA large sub 98.6 4.7E-07 1.6E-11 92.8 13.8 117 58-224 186-348 (703)
266 3o4f_A Spermidine synthase; am 98.4 1.3E-06 4.3E-11 80.9 11.8 115 61-223 82-198 (294)
267 3cvo_A Methyltransferase-like 98.4 2.1E-06 7.3E-11 75.3 12.5 47 59-108 27-73 (202)
268 2r6z_A UPF0341 protein in RSP 98.4 7.8E-08 2.7E-12 87.0 2.9 46 61-108 82-134 (258)
269 3ll7_A Putative methyltransfer 98.4 3.1E-07 1.1E-11 88.6 6.9 77 62-187 93-170 (410)
270 3fut_A Dimethyladenosine trans 98.4 5.2E-07 1.8E-11 82.3 7.8 60 43-105 25-87 (271)
271 1m6y_A S-adenosyl-methyltransf 98.4 2.3E-07 7.8E-12 86.0 5.4 47 61-107 25-71 (301)
272 2qy6_A UPF0209 protein YFCK; s 98.4 7E-07 2.4E-11 80.9 8.0 155 62-271 60-235 (257)
273 3tqs_A Ribosomal RNA small sub 98.4 6.9E-07 2.4E-11 80.7 7.8 44 61-106 28-71 (255)
274 3s1s_A Restriction endonucleas 98.4 1.8E-06 6.2E-11 89.4 11.5 43 61-103 320-365 (878)
275 3b5i_A S-adenosyl-L-methionine 98.3 2.5E-06 8.7E-11 81.3 11.1 58 166-224 137-226 (374)
276 4gqb_A Protein arginine N-meth 98.3 1.6E-06 5.5E-11 87.8 9.5 103 63-220 358-464 (637)
277 2efj_A 3,7-dimethylxanthine me 98.3 1.6E-05 5.4E-10 76.1 14.9 58 167-225 137-227 (384)
278 4fzv_A Putative methyltransfer 98.2 4.5E-06 1.5E-10 79.2 10.5 124 60-226 146-287 (359)
279 3ua3_A Protein arginine N-meth 98.2 1.4E-06 4.7E-11 89.0 6.6 105 63-221 410-532 (745)
280 3evf_A RNA-directed RNA polyme 98.1 3.4E-06 1.2E-10 77.2 6.5 37 60-96 72-108 (277)
281 3uzu_A Ribosomal RNA small sub 98.1 5.8E-06 2E-10 75.6 7.9 45 61-105 41-87 (279)
282 3ftd_A Dimethyladenosine trans 98.1 1.2E-05 4E-10 72.2 9.2 43 61-104 30-72 (249)
283 2oyr_A UPF0341 protein YHIQ; a 98.1 5.1E-06 1.7E-10 75.3 6.7 87 61-190 85-174 (258)
284 1m6e_X S-adenosyl-L-methionnin 97.9 2.2E-05 7.6E-10 74.4 8.9 57 166-223 126-209 (359)
285 2wk1_A NOVP; transferase, O-me 97.9 4.3E-05 1.5E-09 70.2 9.2 106 62-223 106-244 (282)
286 3ufb_A Type I restriction-modi 97.9 0.00026 8.9E-09 70.2 15.2 49 61-109 216-277 (530)
287 1qyr_A KSGA, high level kasuga 97.8 1.8E-05 6E-10 71.3 5.1 44 61-106 20-63 (252)
288 3gcz_A Polyprotein; flavivirus 97.8 8.8E-06 3E-10 74.6 2.6 38 60-97 88-125 (282)
289 2k4m_A TR8_protein, UPF0146 pr 97.7 3.2E-05 1.1E-09 64.8 5.0 43 55-98 28-71 (153)
290 3c6k_A Spermine synthase; sper 97.6 7.6E-05 2.6E-09 71.2 6.7 121 61-223 204-331 (381)
291 4auk_A Ribosomal RNA large sub 97.4 0.00047 1.6E-08 65.6 9.6 35 60-96 209-243 (375)
292 3eld_A Methyltransferase; flav 97.4 8.4E-05 2.9E-09 68.6 4.3 39 58-96 77-115 (300)
293 2px2_A Genome polyprotein [con 97.4 0.00042 1.4E-08 62.9 8.6 37 59-95 70-106 (269)
294 2zig_A TTHA0409, putative modi 97.3 0.00041 1.4E-08 63.3 7.3 46 61-108 234-279 (297)
295 3p8z_A Mtase, non-structural p 97.3 0.001 3.5E-08 59.8 9.2 37 60-96 76-112 (267)
296 1wg8_A Predicted S-adenosylmet 97.1 0.00066 2.3E-08 62.3 6.4 42 61-104 21-62 (285)
297 3lkz_A Non-structural protein 97.1 0.002 6.9E-08 59.6 9.4 38 59-96 91-128 (321)
298 1g60_A Adenine-specific methyl 96.5 0.0055 1.9E-07 54.6 7.3 47 60-108 210-256 (260)
299 2oo3_A Protein involved in cat 96.2 0.0027 9.3E-08 58.2 3.4 108 52-221 83-196 (283)
300 1i4w_A Mitochondrial replicati 96.1 0.017 5.9E-07 54.4 8.7 65 41-105 28-101 (353)
301 1f8f_A Benzyl alcohol dehydrog 96.1 0.0052 1.8E-07 57.2 5.0 45 60-104 188-233 (371)
302 2vz8_A Fatty acid synthase; tr 96.0 0.002 6.9E-08 74.2 2.3 104 62-223 1240-1348(2512)
303 3s2e_A Zinc-containing alcohol 96.0 0.0052 1.8E-07 56.4 4.6 44 60-104 164-208 (340)
304 3r24_A NSP16, 2'-O-methyl tran 96.0 0.014 4.8E-07 54.1 7.3 57 164-222 155-216 (344)
305 4ej6_A Putative zinc-binding d 95.8 0.011 3.7E-07 55.3 5.8 46 59-104 179-225 (370)
306 3vyw_A MNMC2; tRNA wobble urid 95.6 0.048 1.6E-06 50.5 9.3 79 163-272 168-249 (308)
307 1pl8_A Human sorbitol dehydrog 95.5 0.013 4.3E-07 54.3 5.1 45 60-104 169-214 (356)
308 3fpc_A NADP-dependent alcohol 95.4 0.011 3.9E-07 54.4 4.4 45 60-104 164-209 (352)
309 1rjd_A PPM1P, carboxy methyl t 95.4 0.41 1.4E-05 44.4 14.8 124 62-220 97-229 (334)
310 2c7p_A Modification methylase 95.1 0.2 6.8E-06 46.3 11.8 44 62-106 10-53 (327)
311 1g55_A DNA cytosine methyltran 95.0 0.11 3.7E-06 48.3 9.7 44 63-106 2-46 (343)
312 2dph_A Formaldehyde dismutase; 94.9 0.015 5.3E-07 54.6 3.8 45 60-104 183-228 (398)
313 3ip1_A Alcohol dehydrogenase, 94.9 0.047 1.6E-06 51.4 7.0 45 60-104 211-256 (404)
314 3jv7_A ADH-A; dehydrogenase, n 94.8 0.022 7.5E-07 52.3 4.4 46 59-104 168-214 (345)
315 3m6i_A L-arabinitol 4-dehydrog 94.8 0.066 2.3E-06 49.4 7.7 46 60-105 177-223 (363)
316 3pvc_A TRNA 5-methylaminomethy 94.7 0.09 3.1E-06 53.0 8.9 77 162-269 149-231 (689)
317 1e3j_A NADP(H)-dependent ketos 94.6 0.033 1.1E-06 51.3 5.2 44 60-104 166-210 (352)
318 3uko_A Alcohol dehydrogenase c 94.6 0.031 1.1E-06 52.0 4.9 45 60-104 191-236 (378)
319 1p0f_A NADP-dependent alcohol 94.5 0.041 1.4E-06 51.1 5.4 45 60-104 189-234 (373)
320 4a2c_A Galactitol-1-phosphate 94.4 0.074 2.5E-06 48.5 6.9 45 60-104 158-203 (346)
321 4dvj_A Putative zinc-dependent 94.4 0.068 2.3E-06 49.6 6.7 43 62-104 171-215 (363)
322 4eez_A Alcohol dehydrogenase 1 94.4 0.078 2.7E-06 48.4 7.0 45 60-104 161-206 (348)
323 3tka_A Ribosomal RNA small sub 94.3 0.058 2E-06 50.7 6.0 43 61-103 56-99 (347)
324 2uyo_A Hypothetical protein ML 94.3 0.9 3.1E-05 41.6 13.9 110 64-225 104-220 (310)
325 2jhf_A Alcohol dehydrogenase E 94.2 0.058 2E-06 50.0 5.7 45 60-104 189-234 (374)
326 3g7u_A Cytosine-specific methy 94.2 0.32 1.1E-05 45.8 10.9 41 64-105 3-43 (376)
327 1uuf_A YAHK, zinc-type alcohol 94.2 0.024 8.2E-07 52.9 3.1 45 59-104 191-236 (369)
328 1vj0_A Alcohol dehydrogenase, 94.1 0.023 8E-07 53.0 2.9 45 60-104 193-238 (380)
329 2py6_A Methyltransferase FKBM; 94.1 0.093 3.2E-06 49.9 7.1 48 61-108 225-274 (409)
330 1cdo_A Alcohol dehydrogenase; 94.0 0.048 1.6E-06 50.6 4.9 45 60-104 190-235 (374)
331 2fzw_A Alcohol dehydrogenase c 94.0 0.053 1.8E-06 50.2 5.1 45 60-104 188-233 (373)
332 1rjw_A ADH-HT, alcohol dehydro 93.9 0.042 1.4E-06 50.4 4.2 45 59-104 161-206 (339)
333 2h6e_A ADH-4, D-arabinose 1-de 93.9 0.043 1.5E-06 50.3 4.2 44 59-104 168-214 (344)
334 1e3i_A Alcohol dehydrogenase, 93.9 0.053 1.8E-06 50.4 4.9 45 60-104 193-238 (376)
335 3two_A Mannitol dehydrogenase; 93.8 0.053 1.8E-06 49.8 4.6 45 59-104 173-218 (348)
336 2d8a_A PH0655, probable L-thre 93.7 0.071 2.4E-06 48.9 5.3 43 62-104 167-210 (348)
337 3tos_A CALS11; methyltransfera 93.4 0.58 2E-05 42.0 10.6 56 160-223 157-217 (257)
338 3uog_A Alcohol dehydrogenase; 92.8 0.067 2.3E-06 49.5 3.7 44 60-104 187-231 (363)
339 3gms_A Putative NADPH:quinone 92.7 0.074 2.5E-06 48.6 3.8 44 60-104 142-187 (340)
340 1pqw_A Polyketide synthase; ro 92.7 0.11 3.7E-06 43.4 4.5 43 60-103 36-80 (198)
341 4b7c_A Probable oxidoreductase 92.7 0.077 2.6E-06 48.3 3.8 42 60-102 147-190 (336)
342 3ubt_Y Modification methylase 92.6 1 3.5E-05 40.7 11.4 41 64-105 1-41 (331)
343 1eg2_A Modification methylase 92.6 0.14 4.8E-06 47.2 5.4 48 60-109 240-290 (319)
344 3ps9_A TRNA 5-methylaminomethy 92.4 0.41 1.4E-05 48.0 9.1 76 163-269 158-239 (676)
345 2b5w_A Glucose dehydrogenase; 92.2 0.098 3.4E-06 48.2 4.0 45 60-104 164-220 (357)
346 1boo_A Protein (N-4 cytosine-s 92.1 0.21 7.1E-06 45.9 6.0 47 60-108 250-296 (323)
347 3goh_A Alcohol dehydrogenase, 91.6 0.18 6.2E-06 45.4 4.9 43 60-104 140-183 (315)
348 1v3u_A Leukotriene B4 12- hydr 91.6 0.17 5.7E-06 45.9 4.7 42 60-102 143-186 (333)
349 2zig_A TTHA0409, putative modi 91.4 0.38 1.3E-05 43.4 6.9 64 162-225 21-99 (297)
350 1jvb_A NAD(H)-dependent alcoho 91.4 0.083 2.9E-06 48.4 2.5 46 59-104 167-214 (347)
351 3fbg_A Putative arginate lyase 91.3 0.18 6.3E-06 46.1 4.7 42 62-104 150-193 (346)
352 3qwb_A Probable quinone oxidor 91.3 0.18 6.3E-06 45.8 4.6 44 60-104 146-191 (334)
353 1iz0_A Quinone oxidoreductase; 91.2 0.089 3.1E-06 47.2 2.4 44 60-104 123-168 (302)
354 3jyn_A Quinone oxidoreductase; 91.2 0.14 4.9E-06 46.4 3.8 44 60-104 138-183 (325)
355 2dq4_A L-threonine 3-dehydroge 91.2 0.087 3E-06 48.2 2.3 42 62-103 164-206 (343)
356 1piw_A Hypothetical zinc-type 90.9 0.098 3.4E-06 48.3 2.5 45 59-104 176-221 (360)
357 3nx4_A Putative oxidoreductase 90.7 0.42 1.4E-05 43.0 6.5 39 65-104 149-189 (324)
358 3qv2_A 5-cytosine DNA methyltr 90.4 0.97 3.3E-05 41.7 8.7 45 62-106 9-55 (327)
359 2c0c_A Zinc binding alcohol de 90.4 0.33 1.1E-05 44.8 5.6 44 60-104 161-206 (362)
360 3tqh_A Quinone oxidoreductase; 90.0 0.52 1.8E-05 42.5 6.5 44 59-104 149-194 (321)
361 1yb5_A Quinone oxidoreductase; 90.0 0.2 6.8E-06 46.2 3.7 43 60-103 168-212 (351)
362 2j3h_A NADP-dependent oxidored 89.2 0.24 8.3E-06 45.0 3.6 43 60-103 153-197 (345)
363 2eih_A Alcohol dehydrogenase; 89.1 0.23 7.9E-06 45.3 3.4 44 60-104 164-209 (343)
364 4h0n_A DNMT2; SAH binding, tra 88.9 1.4 4.8E-05 40.7 8.6 43 64-106 4-47 (333)
365 4eye_A Probable oxidoreductase 88.3 0.17 5.8E-06 46.4 1.9 44 60-104 157-202 (342)
366 2hcy_A Alcohol dehydrogenase 1 88.3 0.25 8.7E-06 45.1 3.0 44 60-104 167-212 (347)
367 2qrv_A DNA (cytosine-5)-methyl 88.0 1.3 4.6E-05 40.2 7.7 45 61-105 14-59 (295)
368 3krt_A Crotonyl COA reductase; 88.0 1.2 3.9E-05 42.5 7.6 45 59-104 225-271 (456)
369 4a0s_A Octenoyl-COA reductase/ 87.8 1.8 6.2E-05 40.9 8.8 45 59-104 217-263 (447)
370 1qor_A Quinone oxidoreductase; 87.3 0.42 1.5E-05 43.1 3.9 44 60-104 138-183 (327)
371 2cf5_A Atccad5, CAD, cinnamyl 87.3 0.22 7.4E-06 45.9 1.9 43 60-103 177-221 (357)
372 2j8z_A Quinone oxidoreductase; 87.2 0.49 1.7E-05 43.4 4.3 43 60-103 160-204 (354)
373 1xa0_A Putative NADPH dependen 87.0 0.53 1.8E-05 42.4 4.4 44 60-104 146-192 (328)
374 1kol_A Formaldehyde dehydrogen 86.7 0.81 2.8E-05 42.5 5.6 45 60-104 183-228 (398)
375 1boo_A Protein (N-4 cytosine-s 86.4 1.2 4E-05 40.8 6.4 63 162-224 14-85 (323)
376 4dup_A Quinone oxidoreductase; 86.3 0.49 1.7E-05 43.4 3.8 44 60-104 165-210 (353)
377 2vn8_A Reticulon-4-interacting 85.9 0.51 1.8E-05 43.6 3.7 42 60-103 181-224 (375)
378 1wly_A CAAR, 2-haloacrylate re 85.8 0.62 2.1E-05 42.2 4.2 44 60-104 143-188 (333)
379 1tt7_A YHFP; alcohol dehydroge 85.7 0.68 2.3E-05 41.8 4.3 44 60-104 147-193 (330)
380 3gqv_A Enoyl reductase; medium 85.6 0.86 2.9E-05 42.1 5.0 42 61-104 163-206 (371)
381 2zb4_A Prostaglandin reductase 84.6 0.73 2.5E-05 42.1 4.0 45 60-104 156-204 (357)
382 2cdc_A Glucose dehydrogenase g 84.3 0.32 1.1E-05 44.9 1.5 41 63-104 181-225 (366)
383 3gaz_A Alcohol dehydrogenase s 84.0 0.85 2.9E-05 41.6 4.2 43 60-104 148-192 (343)
384 4dcm_A Ribosomal RNA large sub 83.8 4.3 0.00015 37.8 9.1 98 62-223 38-136 (375)
385 1yqd_A Sinapyl alcohol dehydro 83.2 0.48 1.6E-05 43.8 2.2 43 60-103 184-228 (366)
386 3iei_A Leucine carboxyl methyl 81.6 32 0.0011 31.6 17.1 174 62-269 90-279 (334)
387 3fwz_A Inner membrane protein 81.6 13 0.00044 28.9 9.9 39 64-104 8-48 (140)
388 3pi7_A NADH oxidoreductase; gr 79.5 0.95 3.3E-05 41.3 2.8 42 62-104 163-207 (349)
389 1g60_A Adenine-specific methyl 78.8 3.3 0.00011 36.3 6.0 24 201-224 52-75 (260)
390 3swr_A DNA (cytosine-5)-methyl 78.8 19 0.00063 38.3 12.6 43 63-105 540-582 (1002)
391 1gu7_A Enoyl-[acyl-carrier-pro 71.9 3.6 0.00012 37.5 4.5 38 59-97 163-203 (364)
392 4ft4_B DNA (cytosine-5)-methyl 69.7 38 0.0013 34.3 12.0 43 64-106 213-260 (784)
393 1zsy_A Mitochondrial 2-enoyl t 69.2 6.5 0.00022 35.8 5.6 38 59-96 164-203 (357)
394 1h2b_A Alcohol dehydrogenase; 68.9 5.7 0.0002 36.2 5.2 45 59-104 183-229 (359)
395 3pxx_A Carveol dehydrogenase; 68.8 34 0.0012 29.3 10.1 34 61-95 8-43 (287)
396 1eg2_A Modification methylase 64.9 11 0.00037 34.3 6.2 62 163-224 39-107 (319)
397 3ggo_A Prephenate dehydrogenas 60.5 46 0.0016 29.8 9.5 41 64-104 34-76 (314)
398 1zkd_A DUF185; NESG, RPR58, st 59.2 11 0.00036 35.7 5.1 42 64-105 82-130 (387)
399 3av4_A DNA (cytosine-5)-methyl 58.7 71 0.0024 35.0 11.9 42 63-105 851-893 (1330)
400 3ado_A Lambda-crystallin; L-gu 56.9 58 0.002 29.6 9.6 44 63-108 6-51 (319)
401 3iht_A S-adenosyl-L-methionine 56.3 12 0.00041 31.4 4.3 31 64-94 42-72 (174)
402 4fn4_A Short chain dehydrogena 56.1 39 0.0013 29.6 8.0 46 61-108 5-53 (254)
403 1lss_A TRK system potassium up 54.1 64 0.0022 23.9 11.7 38 63-102 4-43 (140)
404 3llv_A Exopolyphosphatase-rela 53.8 21 0.00073 27.3 5.4 40 63-104 6-47 (141)
405 3e8x_A Putative NAD-dependent 53.1 28 0.00095 28.9 6.4 39 61-100 19-59 (236)
406 3trk_A Nonstructural polyprote 53.1 15 0.00052 33.4 4.7 48 175-222 206-258 (324)
407 3mag_A VP39; methylated adenin 52.3 9.6 0.00033 34.9 3.4 36 62-97 60-99 (307)
408 3iup_A Putative NADPH:quinone 52.3 13 0.00044 34.2 4.4 43 61-104 169-214 (379)
409 2hwk_A Helicase NSP2; rossman 52.0 42 0.0014 30.7 7.5 53 167-222 195-253 (320)
410 1id1_A Putative potassium chan 51.2 65 0.0022 24.9 8.0 37 63-101 3-42 (153)
411 2zwa_A Leucine carboxyl methyl 51.0 1.7E+02 0.0058 29.0 12.7 54 162-221 189-252 (695)
412 3ius_A Uncharacterized conserv 50.9 1.1E+02 0.0038 25.7 12.5 34 64-99 6-41 (286)
413 3sju_A Keto reductase; short-c 50.0 1E+02 0.0035 26.5 9.8 46 60-106 21-68 (279)
414 3ioy_A Short-chain dehydrogena 49.9 61 0.0021 28.7 8.5 45 62-108 7-54 (319)
415 4f3n_A Uncharacterized ACR, CO 48.5 14 0.00047 35.5 4.0 46 63-108 138-188 (432)
416 3me5_A Cytosine-specific methy 47.6 20 0.0007 34.7 5.1 43 63-106 88-130 (482)
417 3l9w_A Glutathione-regulated p 47.5 51 0.0018 30.9 7.8 40 63-104 4-45 (413)
418 2vz8_A Fatty acid synthase; tr 47.1 16 0.00053 42.6 4.8 44 60-104 1665-1710(2512)
419 3rku_A Oxidoreductase YMR226C; 45.7 76 0.0026 27.7 8.3 46 61-107 31-81 (287)
420 2vhw_A Alanine dehydrogenase; 45.6 27 0.00093 32.3 5.5 43 61-104 166-209 (377)
421 3b1f_A Putative prephenate deh 45.4 1.1E+02 0.0038 26.3 9.3 40 64-103 7-48 (290)
422 3zwc_A Peroxisomal bifunctiona 44.7 1.5E+02 0.0053 30.1 11.3 43 64-108 317-361 (742)
423 3l4b_C TRKA K+ channel protien 44.6 1.3E+02 0.0044 24.7 10.0 38 64-103 1-40 (218)
424 3qiv_A Short-chain dehydrogena 44.4 1.4E+02 0.0047 24.9 10.6 45 62-107 8-54 (253)
425 4g81_D Putative hexonate dehyd 43.7 47 0.0016 29.1 6.5 46 61-108 7-55 (255)
426 1ej6_A Lambda2; icosahedral, n 42.7 34 0.0012 36.7 6.0 58 159-217 861-918 (1289)
427 3gaf_A 7-alpha-hydroxysteroid 42.5 89 0.003 26.5 8.1 45 61-107 10-57 (256)
428 3c85_A Putative glutathione-re 42.4 1.3E+02 0.0043 23.9 9.4 40 62-103 38-80 (183)
429 4e12_A Diketoreductase; oxidor 42.3 89 0.003 27.2 8.2 43 64-108 5-49 (283)
430 3tjr_A Short chain dehydrogena 42.2 85 0.0029 27.4 8.1 46 61-107 29-76 (301)
431 4fgs_A Probable dehydrogenase 42.1 47 0.0016 29.4 6.3 42 61-104 27-71 (273)
432 1y1p_A ARII, aldehyde reductas 41.5 1.5E+02 0.0051 25.4 9.6 41 61-102 9-51 (342)
433 3ce6_A Adenosylhomocysteinase; 41.1 31 0.001 33.6 5.2 44 60-104 271-315 (494)
434 1e7w_A Pteridine reductase; di 40.8 1.3E+02 0.0046 25.9 9.1 44 62-106 8-54 (291)
435 1zcj_A Peroxisomal bifunctiona 40.8 1.6E+02 0.0053 27.9 10.2 42 64-107 38-81 (463)
436 2aef_A Calcium-gated potassium 40.7 1.5E+02 0.0053 24.4 9.4 37 63-102 9-47 (234)
437 3rkr_A Short chain oxidoreduct 40.5 87 0.003 26.5 7.7 46 61-107 27-74 (262)
438 4eso_A Putative oxidoreductase 40.2 68 0.0023 27.3 6.9 43 61-104 6-50 (255)
439 1x13_A NAD(P) transhydrogenase 40.2 24 0.00081 33.1 4.2 41 62-103 171-212 (401)
440 3tfo_A Putative 3-oxoacyl-(acy 40.1 86 0.0029 27.0 7.7 45 62-107 3-49 (264)
441 3lf2_A Short chain oxidoreduct 40.0 1.7E+02 0.0058 24.7 10.5 46 61-107 6-53 (265)
442 3ucx_A Short chain dehydrogena 39.9 1.7E+02 0.0058 24.7 11.6 45 61-107 9-56 (264)
443 3h7a_A Short chain dehydrogena 39.9 59 0.002 27.6 6.5 47 61-108 5-53 (252)
444 1pjc_A Protein (L-alanine dehy 38.7 39 0.0013 30.9 5.4 42 62-104 166-208 (361)
445 2f1k_A Prephenate dehydrogenas 38.5 1.3E+02 0.0045 25.6 8.6 36 65-102 2-39 (279)
446 3slk_A Polyketide synthase ext 38.4 4.2 0.00014 41.9 -1.5 36 60-96 343-380 (795)
447 3dmg_A Probable ribosomal RNA 38.0 93 0.0032 28.7 7.9 42 177-223 98-139 (381)
448 3ppi_A 3-hydroxyacyl-COA dehyd 37.7 55 0.0019 28.1 5.9 43 61-104 28-72 (281)
449 4gua_A Non-structural polyprot 37.5 77 0.0026 31.7 7.3 76 174-271 216-296 (670)
450 3nyw_A Putative oxidoreductase 37.3 1.2E+02 0.0041 25.5 8.1 46 61-108 5-53 (250)
451 1xg5_A ARPG836; short chain de 37.1 1.2E+02 0.0042 25.7 8.2 44 62-106 31-76 (279)
452 3t4x_A Oxidoreductase, short c 36.6 97 0.0033 26.3 7.4 46 62-108 9-56 (267)
453 3ic5_A Putative saccharopine d 36.5 51 0.0017 23.7 4.8 39 63-103 5-46 (118)
454 3n74_A 3-ketoacyl-(acyl-carrie 36.4 1.8E+02 0.0063 24.2 9.1 41 62-104 8-51 (261)
455 4dio_A NAD(P) transhydrogenase 36.0 31 0.0011 32.7 4.3 42 62-104 189-231 (405)
456 2qhx_A Pteridine reductase 1; 35.3 1.8E+02 0.006 25.8 9.1 44 62-106 45-91 (328)
457 2dpo_A L-gulonate 3-dehydrogen 35.1 1.2E+02 0.004 27.3 7.9 43 64-108 7-51 (319)
458 1wma_A Carbonyl reductase [NAD 35.1 1.6E+02 0.0056 24.3 8.5 44 62-106 3-49 (276)
459 3svt_A Short-chain type dehydr 35.0 1.2E+02 0.0041 25.9 7.8 46 61-107 9-56 (281)
460 3lyl_A 3-oxoacyl-(acyl-carrier 34.2 1.3E+02 0.0046 24.8 7.7 45 62-107 4-50 (247)
461 3l6e_A Oxidoreductase, short-c 34.1 94 0.0032 26.0 6.8 42 62-104 2-45 (235)
462 4dkj_A Cytosine-specific methy 34.0 48 0.0016 31.2 5.2 43 64-106 11-58 (403)
463 3o26_A Salutaridine reductase; 33.9 1.2E+02 0.0042 25.7 7.6 45 61-106 10-56 (311)
464 4imr_A 3-oxoacyl-(acyl-carrier 33.4 1.9E+02 0.0064 24.8 8.8 45 61-106 31-77 (275)
465 1l7d_A Nicotinamide nucleotide 33.2 30 0.001 31.9 3.7 42 62-104 171-213 (384)
466 1iy8_A Levodione reductase; ox 33.0 1.5E+02 0.0051 25.0 8.0 44 62-106 12-57 (267)
467 2eez_A Alanine dehydrogenase; 32.8 55 0.0019 29.9 5.4 42 62-104 165-207 (369)
468 2km1_A Protein DRE2; yeast, an 32.7 19 0.00064 29.2 1.8 41 176-221 55-96 (136)
469 3ew7_A LMO0794 protein; Q8Y8U8 32.7 54 0.0019 26.4 4.8 35 64-99 1-37 (221)
470 3asu_A Short-chain dehydrogena 32.6 1.5E+02 0.0052 24.8 7.9 38 65-103 2-41 (248)
471 3gvc_A Oxidoreductase, probabl 32.6 86 0.0029 27.1 6.4 42 61-104 27-71 (277)
472 4e6p_A Probable sorbitol dehyd 32.5 91 0.0031 26.3 6.5 42 62-104 7-50 (259)
473 3f9i_A 3-oxoacyl-[acyl-carrier 32.3 79 0.0027 26.4 5.9 43 61-104 12-56 (249)
474 3h2s_A Putative NADH-flavin re 32.2 1.2E+02 0.0042 24.4 7.0 35 64-99 1-37 (224)
475 3imf_A Short chain dehydrogena 32.1 84 0.0029 26.6 6.2 44 61-105 4-49 (257)
476 3p2y_A Alanine dehydrogenase/p 31.7 37 0.0013 31.9 3.9 42 62-104 183-225 (381)
477 3op4_A 3-oxoacyl-[acyl-carrier 31.7 1E+02 0.0035 25.9 6.6 43 61-104 7-51 (248)
478 1yb1_A 17-beta-hydroxysteroid 31.5 1.7E+02 0.0057 24.8 8.1 45 61-106 29-75 (272)
479 3awd_A GOX2181, putative polyo 31.1 1.8E+02 0.0061 24.1 8.1 44 62-106 12-57 (260)
480 4ibo_A Gluconate dehydrogenase 30.6 1E+02 0.0034 26.5 6.5 46 61-107 24-71 (271)
481 3vrd_B FCCB subunit, flavocyto 30.6 32 0.0011 31.1 3.3 35 62-96 1-37 (401)
482 2g1u_A Hypothetical protein TM 30.5 36 0.0012 26.6 3.2 39 61-101 17-57 (155)
483 3v8b_A Putative dehydrogenase, 30.4 1.2E+02 0.004 26.2 6.9 43 62-105 27-71 (283)
484 3kzv_A Uncharacterized oxidore 30.3 1.3E+02 0.0043 25.4 7.0 42 63-104 2-46 (254)
485 3r1i_A Short-chain type dehydr 30.3 1E+02 0.0035 26.5 6.5 46 61-107 30-77 (276)
486 3rwb_A TPLDH, pyridoxal 4-dehy 30.3 85 0.0029 26.4 5.8 43 61-104 4-48 (247)
487 2jah_A Clavulanic acid dehydro 30.3 1.9E+02 0.0064 24.1 8.1 44 62-106 6-51 (247)
488 2rhc_B Actinorhodin polyketide 30.2 1.8E+02 0.006 24.8 8.0 44 62-106 21-66 (277)
489 3ulk_A Ketol-acid reductoisome 30.1 78 0.0027 30.8 5.9 37 179-224 97-133 (491)
490 2ae2_A Protein (tropinone redu 29.3 2.5E+02 0.0085 23.4 10.4 43 62-105 8-52 (260)
491 1ae1_A Tropinone reductase-I; 29.0 2E+02 0.0067 24.4 8.1 44 62-106 20-65 (273)
492 4dqx_A Probable oxidoreductase 28.9 1.1E+02 0.0037 26.4 6.4 43 61-104 25-69 (277)
493 2qq5_A DHRS1, dehydrogenase/re 28.8 1.6E+02 0.0054 24.7 7.4 44 62-106 4-49 (260)
494 3o38_A Short chain dehydrogena 28.5 2.6E+02 0.0088 23.3 11.2 44 61-106 20-67 (266)
495 4dry_A 3-oxoacyl-[acyl-carrier 28.4 1.7E+02 0.0058 25.2 7.6 46 61-107 31-78 (281)
496 3iyl_W VP1; non-enveloped viru 28.4 44 0.0015 36.1 4.1 55 163-218 872-926 (1299)
497 3tsc_A Putative oxidoreductase 27.9 2.1E+02 0.0071 24.3 8.1 32 61-94 9-43 (277)
498 1zem_A Xylitol dehydrogenase; 27.9 1.8E+02 0.0061 24.5 7.6 43 62-105 6-50 (262)
499 3tox_A Short chain dehydrogena 27.3 90 0.0031 27.0 5.6 43 62-105 7-51 (280)
500 3pgx_A Carveol dehydrogenase; 27.1 1.8E+02 0.0062 24.7 7.5 33 61-94 13-47 (280)
No 1
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.97 E-value=4.8e-31 Score=242.48 Aligned_cols=257 Identities=40% Similarity=0.751 Sum_probs=158.8
Q ss_pred hhcCCCccccccccccccccccCCCCCchhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHH
Q 047406 23 KRKGKDVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADA 102 (290)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a 102 (290)
.++....|.+|||..||+++... ..++++..+.+.+.++.+|||||||+|.++..++..++..+|+|+|+|+.+++.|
T Consensus 9 ~~~~~~~f~~gny~~yy~~r~~~--~~~~~l~~l~~~~~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A 86 (292)
T 3g07_A 9 FKKQQRKFQYGNYCKYYGYRNPS--CEDGRLRVLKPEWFRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSA 86 (292)
T ss_dssp ---------------------------CGGGGTSCGGGTTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHH
T ss_pred ccccchhcccCChhhhccccCCc--chhHHHHhhhhhhcCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 34455789999999999998744 7778888888888899999999999999999999998888999999999999999
Q ss_pred HHHHHHHHHhhhhh-hhhhhhchhhhhhccCCcchhhhhHHH-HHHhhh-------------cCCCccccCcCcceeEee
Q 047406 103 YWHLRKIVRTEHNE-KRRANASRVEVIEKGDGLEKNVTAAQE-EKKAIS-------------RNCSPAERNLFDIVSFKQ 167 (290)
Q Consensus 103 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~i~~~~ 167 (290)
++++.......... .+-......+ .+ +++.+.... +....+ ............++.|.+
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~~~~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~ 160 (292)
T 3g07_A 87 RQNIRHYLSEELRLPPQTLEGDPGA-----EG-EEGTTTVRKRSCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVT 160 (292)
T ss_dssp HHTC---------------------------------------------------------CCSSTTCCSSTTTTEEEEE
T ss_pred HHHHHhhhhhhcccccccccccccc-----cc-ccccccccccccccchhhhccCccccccccccccccccccccceEEe
Confidence 99866532110000 0000000000 00 000000000 000000 000001122335799999
Q ss_pred cccccCC----CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccc
Q 047406 168 ENFVHGR----DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNF 243 (290)
Q Consensus 168 ~d~~~~~----~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~ 243 (290)
.|+.... +...+.||+|+|..+++|+|++|+++++..++.+++++|+|||+|++++++|.+|.....+...+..++
T Consensus 161 ~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~ 240 (292)
T 3g07_A 161 GNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNY 240 (292)
T ss_dssp CCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHH
T ss_pred cccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhh
Confidence 9997632 234688999999999999999999999999999999999999999999999999988878887888888
Q ss_pred cccccCchhHHHHHHHH--cCCeeeEeccCCCCCCCCCCCCcceeeecC
Q 047406 244 QNIKLYPKEFQEILLDK--IGFRTVEDIGSGGLSSSKTGFNRPIFLFRK 290 (290)
Q Consensus 244 ~~~~~~~~~~~~~ll~~--~Gf~~v~~~~~~~~~~~~~~~~~~~~~~~k 290 (290)
..+.+.+++|.. +|.+ +||+.++++.. ...+..+|.|++.+|+|
T Consensus 241 ~~~~~~p~~~~~-~L~~~~~GF~~~~~~~~--~~~~~~g~~r~i~~~~k 286 (292)
T 3g07_A 241 YRIQLKPEQFSS-YLTSPDVGFSSYELVAT--PHNTSKGFQRPVYLFHK 286 (292)
T ss_dssp HHCCCCGGGHHH-HHTSTTTCCCEEEEC-------------CCCEEEEC
T ss_pred hcEEEcHHHHHH-HHHhcCCCceEEEEecc--CCCCCCCccceEEEEEc
Confidence 888999999988 5666 99999999886 45567899999999997
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.78 E-value=2.1e-18 Score=156.73 Aligned_cols=112 Identities=17% Similarity=0.278 Sum_probs=93.0
Q ss_pred hhhccCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCc
Q 047406 57 KKEWFEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGL 134 (290)
Q Consensus 57 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (290)
...+.+|.+|||||||+|..+..+++.++ +.+|+|+|+|+.+++.|++++..
T Consensus 65 ~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~-------------------------- 118 (261)
T 4gek_A 65 ERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDA-------------------------- 118 (261)
T ss_dssp HHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHT--------------------------
T ss_pred HHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHh--------------------------
Confidence 34467899999999999999999998753 46899999999999999997654
Q ss_pred chhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 135 EKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.+...++++.+.|+.+ + +.+.||+|+|..+++|++ .++...+|++++++|+
T Consensus 119 ----------------------~~~~~~v~~~~~D~~~-~--~~~~~d~v~~~~~l~~~~----~~~~~~~l~~i~~~Lk 169 (261)
T 4gek_A 119 ----------------------YKAPTPVDVIEGDIRD-I--AIENASMVVLNFTLQFLE----PSERQALLDKIYQGLN 169 (261)
T ss_dssp ----------------------SCCSSCEEEEESCTTT-C--CCCSEEEEEEESCGGGSC----HHHHHHHHHHHHHHEE
T ss_pred ----------------------hccCceEEEeeccccc-c--cccccccceeeeeeeecC----chhHhHHHHHHHHHcC
Confidence 3344569999999876 3 346799999999998774 3566789999999999
Q ss_pred CCcEEEEee
Q 047406 215 PGGIFVLEP 223 (290)
Q Consensus 215 pgG~l~i~~ 223 (290)
|||+|++..
T Consensus 170 pGG~lii~e 178 (261)
T 4gek_A 170 PGGALVLSE 178 (261)
T ss_dssp EEEEEEEEE
T ss_pred CCcEEEEEe
Confidence 999999954
No 3
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.75 E-value=1.2e-17 Score=147.91 Aligned_cols=153 Identities=17% Similarity=0.185 Sum_probs=116.2
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|..+..+++..+. +|+|+|+|+.+++.|+.++..
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~------------------------------- 91 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVK------------------------------- 91 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 467889999999999999999998765 999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+.+.|+.+ ++.+.++||+|+|..+++|+ +...++.++.++|+|||++
T Consensus 92 -----------------~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~-------~~~~~l~~~~~~L~pgG~l 146 (257)
T 3f4k_A 92 -----------------ANCADRVKGITGSMDN-LPFQNEELDLIWSEGAIYNI-------GFERGMNEWSKYLKKGGFI 146 (257)
T ss_dssp -----------------TTCTTTEEEEECCTTS-CSSCTTCEEEEEEESCSCCC-------CHHHHHHHHHTTEEEEEEE
T ss_pred -----------------cCCCCceEEEECChhh-CCCCCCCEEEEEecChHhhc-------CHHHHHHHHHHHcCCCcEE
Confidence 3445568999999955 56667899999999998654 3578999999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++....|............+...+.. .....++.+ +++++||++++....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~l~~aGf~~v~~~~~ 196 (257)
T 3f4k_A 147 AVSEASWFTSERPAEIEDFWMDAYPE-ISVIPTCID-KMERAGYTPTAHFIL 196 (257)
T ss_dssp EEEEEEESSSCCCHHHHHHHHHHCTT-CCBHHHHHH-HHHHTTEEEEEEEEC
T ss_pred EEEEeeccCCCChHHHHHHHHHhCCC-CCCHHHHHH-HHHHCCCeEEEEEEC
Confidence 99876554332222222223323332 234455555 899999999987654
No 4
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.75 E-value=3.2e-17 Score=142.35 Aligned_cols=173 Identities=21% Similarity=0.313 Sum_probs=117.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.|+.++..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 75 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKI-------------------------------- 75 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTG--------------------------------
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 467899999999999999999877667999999999999999987643
Q ss_pred HHHHHHhhhcCCCccccCcC----cceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERNLF----DIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~----~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
.++. .++.+.+.|+.. .+.+.++||+|+|..+++|+. ++....+++++.++|+||
T Consensus 76 ----------------~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~~~l~~~~----~~~~~~~l~~~~~~Lkpg 134 (219)
T 3jwg_A 76 ----------------DRLPEMQRKRISLFQSSLVY-RDKRFSGYDAATVIEVIEHLD----ENRLQAFEKVLFEFTRPQ 134 (219)
T ss_dssp ----------------GGSCHHHHTTEEEEECCSSS-CCGGGTTCSEEEEESCGGGCC----HHHHHHHHHHHHTTTCCS
T ss_pred ----------------hccccccCcceEEEeCcccc-cccccCCCCEEEEHHHHHhCC----HHHHHHHHHHHHHhhCCC
Confidence 1111 258899999844 344567899999999997662 456689999999999999
Q ss_pred cEEEEeeCCCchhhhh-hhhhhhhhcccc-ccccCchhHHH---HHHHHcCCeeeEeccCCCCCCCCCCCCcceeeecC
Q 047406 217 GIFVLEPQPWVSYEKN-RRVSETTATNFQ-NIKLYPKEFQE---ILLDKIGFRTVEDIGSGGLSSSKTGFNRPIFLFRK 290 (290)
Q Consensus 217 G~l~i~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~---~ll~~~Gf~~v~~~~~~~~~~~~~~~~~~~~~~~k 290 (290)
|+++..+... +... ..+......+.. ...+.++++.+ .+++++||++. ..+.|.. ....++...|-+|+|
T Consensus 135 G~~i~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~Gf~v~-~~~~g~~-~~~~g~~~qi~~~~~ 209 (219)
T 3jwg_A 135 TVIVSTPNKE--YNFHYGNLFEGNLRHRDHRFEWTRKEFQTWAVKVAEKYGYSVR-FLQIGEI-DDEFGSPTQMGVFTL 209 (219)
T ss_dssp EEEEEEEBGG--GGGCCCCT-----GGGCCTTSBCHHHHHHHHHHHHHHHTEEEE-EEEESCC-CTTSCCSEEEEEEEE
T ss_pred EEEEEccchh--hhhhhcccCcccccccCceeeecHHHHHHHHHHHHHHCCcEEE-EEecCCc-cccCCCCeEEEEEec
Confidence 9777654311 1000 001100111111 22356666652 47899999754 4433222 335677778888875
No 5
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.74 E-value=2.6e-17 Score=141.20 Aligned_cols=150 Identities=23% Similarity=0.339 Sum_probs=110.5
Q ss_pred CcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQE 143 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (290)
.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|+.++..
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~----------------------------------- 88 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIAD----------------------------------- 88 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHH-----------------------------------
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHh-----------------------------------
Confidence 49999999999999999987 666999999999999999998765
Q ss_pred HHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEEee
Q 047406 144 EKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (290)
.++..++.+...|+.+ ++.+.++||+|+|..+++|+ ++...++.++.++|+|||.+++..
T Consensus 89 -------------~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~l~~~------~~~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 89 -------------ANLNDRIQIVQGDVHN-IPIEDNYADLIVSRGSVFFW------EDVATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp -------------TTCTTTEEEEECBTTB-CSSCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred -------------ccccCceEEEEcCHHH-CCCCcccccEEEECchHhhc------cCHHHHHHHHHHhCCCCCEEEEEe
Confidence 3344568999999876 45667899999999999765 467889999999999999999976
Q ss_pred CCCchhhhhhhhhhhhhcc---c-----cccc-cCchhHHHHHHHHcCCeeeEeccC
Q 047406 224 QPWVSYEKNRRVSETTATN---F-----QNIK-LYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~---~-----~~~~-~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
......... ......... + .+.. +.++++.+ +++++||+.+++...
T Consensus 149 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGf~~v~~~~~ 203 (219)
T 3dlc_A 149 GFGNKELRD-SISAEMIRKNPDWKEFNRKNISQENVERFQN-VLDEIGISSYEIILG 203 (219)
T ss_dssp CCSSHHHHH-HHHHHHHHHCTTHHHHHHHHSSHHHHHHHHH-HHHHHTCSSEEEEEE
T ss_pred ccCcHHHHH-HHHHHHHHhHHHHHhhhhhccccCCHHHHHH-HHHHcCCCeEEEEec
Confidence 433221111 111111100 0 1122 23355544 899999999888754
No 6
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.74 E-value=2e-17 Score=148.22 Aligned_cols=153 Identities=18% Similarity=0.161 Sum_probs=114.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|+.++..
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~------------------------------- 91 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQ------------------------------- 91 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHH-------------------------------
Confidence 467899999999999999999987 666999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+...|+.+ .+.+.++||+|+|..+++++ +...++.++.++|+|||++
T Consensus 92 -----------------~~~~~~v~~~~~d~~~-~~~~~~~fD~i~~~~~~~~~-------~~~~~l~~~~~~LkpgG~l 146 (267)
T 3kkz_A 92 -----------------SGLQNRVTGIVGSMDD-LPFRNEELDLIWSEGAIYNI-------GFERGLNEWRKYLKKGGYL 146 (267)
T ss_dssp -----------------TTCTTTEEEEECCTTS-CCCCTTCEEEEEESSCGGGT-------CHHHHHHHHGGGEEEEEEE
T ss_pred -----------------cCCCcCcEEEEcChhh-CCCCCCCEEEEEEcCCceec-------CHHHHHHHHHHHcCCCCEE
Confidence 3445569999999966 56667899999999999654 3578999999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++....|............+...+.. .....++.+ +++++||++++....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~l~~aGf~~v~~~~~ 196 (267)
T 3kkz_A 147 AVSECSWFTDERPAEINDFWMDAYPE-IDTIPNQVA-KIHKAGYLPVATFIL 196 (267)
T ss_dssp EEEEEEESSSCCCHHHHHHHHHHCTT-CEEHHHHHH-HHHHTTEEEEEEEEC
T ss_pred EEEEeeecCCCChHHHHHHHHHhCCC-CCCHHHHHH-HHHHCCCEEEEEEEC
Confidence 99765443222222222222222222 123344544 899999999887654
No 7
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.74 E-value=4.5e-17 Score=142.82 Aligned_cols=158 Identities=16% Similarity=0.289 Sum_probs=114.7
Q ss_pred hhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhc
Q 047406 51 PRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEK 130 (290)
Q Consensus 51 ~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (290)
..++.+...+.++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.++.+.
T Consensus 42 ~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------------------------ 95 (242)
T 3l8d_A 42 TIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERG------------------------ 95 (242)
T ss_dssp THHHHHHHHSCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTT------------------------
T ss_pred HHHHHHHHHcCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhc------------------------
Confidence 345566666778999999999999999999887 458999999999999887631
Q ss_pred cCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH
Q 047406 131 GDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
...++.+...|+.+ .+.+.++||+|+|..+++|+ ++...++.++.
T Consensus 96 ----------------------------~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~ 140 (242)
T 3l8d_A 96 ----------------------------EGPDLSFIKGDLSS-LPFENEQFEAIMAINSLEWT------EEPLRALNEIK 140 (242)
T ss_dssp ----------------------------CBTTEEEEECBTTB-CSSCTTCEEEEEEESCTTSS------SCHHHHHHHHH
T ss_pred ----------------------------ccCCceEEEcchhc-CCCCCCCccEEEEcChHhhc------cCHHHHHHHHH
Confidence 12358899999876 45667899999999999765 46679999999
Q ss_pred hhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 211 KLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 211 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
++|+|||++++..........................+.+.++.+ +++++||++++...
T Consensus 141 ~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~ 199 (242)
T 3l8d_A 141 RVLKSDGYACIAILGPTAKPRENSYPRLYGKDVVCNTMMPWEFEQ-LVKEQGFKVVDGIG 199 (242)
T ss_dssp HHEEEEEEEEEEEECTTCGGGGGGGGGGGTCCCSSCCCCHHHHHH-HHHHTTEEEEEEEE
T ss_pred HHhCCCeEEEEEEcCCcchhhhhhhhhhccccccccCCCHHHHHH-HHHHcCCEEEEeec
Confidence 999999999997532222111112222222222222345556655 89999999988653
No 8
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.74 E-value=1.3e-17 Score=147.64 Aligned_cols=151 Identities=20% Similarity=0.259 Sum_probs=110.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|+.++..
T Consensus 35 ~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~-------------------------------- 81 (256)
T 1nkv_A 35 KPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEE-------------------------------- 81 (256)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHh--------------------------------
Confidence 578899999999999999999876 45899999999999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+.+.|+.+. +. +++||+|+|..+++++ .+...++.++.++|+|||.++
T Consensus 82 ----------------~~~~~~v~~~~~d~~~~-~~-~~~fD~V~~~~~~~~~------~~~~~~l~~~~r~LkpgG~l~ 137 (256)
T 1nkv_A 82 ----------------LGVSERVHFIHNDAAGY-VA-NEKCDVAACVGATWIA------GGFAGAEELLAQSLKPGGIML 137 (256)
T ss_dssp ----------------TTCTTTEEEEESCCTTC-CC-SSCEEEEEEESCGGGT------SSSHHHHHHHTTSEEEEEEEE
T ss_pred ----------------cCCCcceEEEECChHhC-Cc-CCCCCEEEECCChHhc------CCHHHHHHHHHHHcCCCeEEE
Confidence 34445689999998763 44 6889999999998655 356889999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccc-cCchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIK-LYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+..+.|............+.. ..+.. +...++.+ +++++||++++...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~l~~aGf~~~~~~~ 186 (256)
T 1nkv_A 138 IGEPYWRQLPATEEIAQACGV-SSTSDFLTLPGLVG-AFDDLGYDVVEMVL 186 (256)
T ss_dssp EEEEEETTCCSSHHHHHTTTC-SCGGGSCCHHHHHH-HHHTTTBCCCEEEE
T ss_pred EecCcccCCCChHHHHHHHhc-ccccccCCHHHHHH-HHHHCCCeeEEEEe
Confidence 976544322111111111111 11112 33445544 89999999887643
No 9
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.73 E-value=5.7e-17 Score=142.02 Aligned_cols=133 Identities=20% Similarity=0.307 Sum_probs=99.3
Q ss_pred ccccccccccccCCCCCchhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHh
Q 047406 33 GNYKNYYGYRIGQGLNEDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRT 112 (290)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~ 112 (290)
..+..+|+... .........+.+...+.++.+|||+|||+|.++..+++. .+++|+|+|+.+++.|+.++..
T Consensus 5 ~~~a~~yd~~~-~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~---- 76 (243)
T 3d2l_A 5 EQFAYVYDELM-QDVPYPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAME---- 76 (243)
T ss_dssp -CTTHHHHHHT-TTCCHHHHHHHHHHHSCTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHhh-hcccHHHHHHHHHHHcCCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhh----
Confidence 34455555333 222233445566667778899999999999999998876 5899999999999999987654
Q ss_pred hhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEch-hhh
Q 047406 113 EHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLS-VTK 191 (290)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~-vl~ 191 (290)
.+ .++.+...|+.+ .+.+ ++||+|+|.. +++
T Consensus 77 --------------------------------------------~~--~~~~~~~~d~~~-~~~~-~~fD~v~~~~~~~~ 108 (243)
T 3d2l_A 77 --------------------------------------------TN--RHVDFWVQDMRE-LELP-EPVDAITILCDSLN 108 (243)
T ss_dssp --------------------------------------------TT--CCCEEEECCGGG-CCCS-SCEEEEEECTTGGG
T ss_pred --------------------------------------------cC--CceEEEEcChhh-cCCC-CCcCEEEEeCCchh
Confidence 11 247888888876 3433 7899999986 776
Q ss_pred hhhhcCCchHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 192 WIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 192 ~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
|+. ..++...++.++.++|+|||.+++..+
T Consensus 109 ~~~---~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 109 YLQ---TEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp GCC---SHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred hcC---CHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 552 346778999999999999999999543
No 10
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.72 E-value=1.1e-16 Score=138.93 Aligned_cols=171 Identities=15% Similarity=0.239 Sum_probs=114.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.|+.++..
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 75 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDR-------------------------------- 75 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTT--------------------------------
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 467899999999999999999877667999999999999999987543
Q ss_pred HHHHHHhhhcCCCccccCcC----cceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERNLF----DIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~----~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
.++. .++.+.+.|+.. .+.+.++||+|+|..+++|+ .++....+++++.++|+||
T Consensus 76 ----------------~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~----~~~~~~~~l~~~~~~Lkpg 134 (217)
T 3jwh_A 76 ----------------LRLPRNQWERLQLIQGALTY-QDKRFHGYDAATVIEVIEHL----DLSRLGAFERVLFEFAQPK 134 (217)
T ss_dssp ----------------CCCCHHHHTTEEEEECCTTS-CCGGGCSCSEEEEESCGGGC----CHHHHHHHHHHHHTTTCCS
T ss_pred ----------------hcCCcccCcceEEEeCCccc-ccccCCCcCEEeeHHHHHcC----CHHHHHHHHHHHHHHcCCC
Confidence 1222 258899999744 34445789999999999766 2456789999999999999
Q ss_pred cEEEEeeCCCchhhhhh-hhhhhhhccc-cccccCchhHHH---HHHHHcCCeeeEeccCCCCCCCCCCCCcceeee
Q 047406 217 GIFVLEPQPWVSYEKNR-RVSETTATNF-QNIKLYPKEFQE---ILLDKIGFRTVEDIGSGGLSSSKTGFNRPIFLF 288 (290)
Q Consensus 217 G~l~i~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~---~ll~~~Gf~~v~~~~~~~~~~~~~~~~~~~~~~ 288 (290)
|++++.+.. .+...- .+........ ....+.++++.+ .+++++||++ ...+.|.. ....|+...|..|
T Consensus 135 G~li~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v-~~~~~g~~-~~~~g~~~q~~~~ 207 (217)
T 3jwh_A 135 IVIVTTPNI--EYNVKFANLPAGKLRHKDHRFEWTRSQFQNWANKITERFAYNV-QFQPIGEA-DPEVGSPTQMAVF 207 (217)
T ss_dssp EEEEEEEBH--HHHHHTC-----------CCSCBCHHHHHHHHHHHHHHSSEEE-EECCCSCC-CSSSCCSEEEEEE
T ss_pred EEEEEccCc--ccchhhcccccccccccccccccCHHHHHHHHHHHHHHcCceE-EEEecCCc-cCCCCchheeEee
Confidence 988876431 010000 0000011111 122356666652 4889999986 44544333 2234555555444
No 11
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.72 E-value=7.7e-17 Score=146.38 Aligned_cols=153 Identities=15% Similarity=0.133 Sum_probs=111.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|..+..+++.++ .+|+|+|+|+.+++.|+..+..
T Consensus 81 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 127 (297)
T 2o57_A 81 QRQAKGLDLGAGYGGAARFLVRKFG-VSIDCLNIAPVQNKRNEEYNNQ-------------------------------- 127 (297)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHh--------------------------------
Confidence 6789999999999999999998764 4899999999999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+ ++.++++||+|+|..+++|+ .+...++.++.++|+|||+++
T Consensus 128 ----------------~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~LkpgG~l~ 184 (297)
T 2o57_A 128 ----------------AGLADNITVKYGSFLE-IPCEDNSYDFIWSQDAFLHS------PDKLKVFQECARVLKPRGVMA 184 (297)
T ss_dssp ----------------HTCTTTEEEEECCTTS-CSSCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------cCCCcceEEEEcCccc-CCCCCCCEeEEEecchhhhc------CCHHHHHHHHHHHcCCCeEEE
Confidence 3344568999999876 56667899999999999765 247899999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+............................+.++.+ +++++||++++...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 185 ITDPMKEDGIDKSSIQPILDRIKLHDMGSLGLYRS-LAKECGLVTLRTFS 233 (297)
T ss_dssp EEEEEECTTCCGGGGHHHHHHHTCSSCCCHHHHHH-HHHHTTEEEEEEEE
T ss_pred EEEeccCCCCchHHHHHHHHHhcCCCCCCHHHHHH-HHHHCCCeEEEEEE
Confidence 97543221111111111111111111224455555 89999999887754
No 12
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.72 E-value=9.1e-17 Score=140.61 Aligned_cols=154 Identities=18% Similarity=0.235 Sum_probs=108.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.|+.++..
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------------------- 90 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG------------------------------- 90 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-------------------------------
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc-------------------------------
Confidence 3577999999999999999999998778999999999999999885422
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
. .++.+.+.|+.+ .+.+ ++||+|+|..+++|+. ++....++.++.++|+|||.+
T Consensus 91 -----------------~---~~~~~~~~d~~~-~~~~-~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~l 144 (234)
T 3dtn_A 91 -----------------N---LKVKYIEADYSK-YDFE-EKYDMVVSALSIHHLE----DEDKKELYKRSYSILKESGIF 144 (234)
T ss_dssp -----------------C---TTEEEEESCTTT-CCCC-SCEEEEEEESCGGGSC----HHHHHHHHHHHHHHEEEEEEE
T ss_pred -----------------C---CCEEEEeCchhc-cCCC-CCceEEEEeCccccCC----HHHHHHHHHHHHHhcCCCcEE
Confidence 1 158899999876 3444 8999999999997662 345568999999999999999
Q ss_pred EEeeCCCchhhhhhh-----hhhh----------h---hccccccc-cCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRR-----VSET----------T---ATNFQNIK-LYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~-----~~~~----------~---~~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++............. .... . .....+.. +..+++.+ +++++||+.++++..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~aGF~~v~~~~~ 214 (234)
T 3dtn_A 145 INADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLN-WLKEAGFRDVSCIYK 214 (234)
T ss_dssp EEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHH-HHHHTTCEEEEEEEE
T ss_pred EEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHH-HHHHcCCCceeeeee
Confidence 996533211110000 0000 0 00111222 34445544 899999999988654
No 13
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.71 E-value=2.5e-16 Score=140.37 Aligned_cols=150 Identities=12% Similarity=0.226 Sum_probs=107.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++..+ +|+|+|+|+.+++.|+..+..
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~-------------------------------- 81 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEG-------------------------------- 81 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHh--------------------------------
Confidence 4788999999999999999988753 999999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++ .++.+...|+.+ ++.++++||+|+|..+++|+ .+...++.++.++|+|||.++
T Consensus 82 ----------------~~~-~~v~~~~~d~~~-l~~~~~~fD~V~~~~~l~~~------~d~~~~l~~~~r~LkpgG~l~ 137 (260)
T 1vl5_A 82 ----------------NGH-QQVEYVQGDAEQ-MPFTDERFHIVTCRIAAHHF------PNPASFVSEAYRVLKKGGQLL 137 (260)
T ss_dssp ----------------TTC-CSEEEEECCC-C-CCSCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------cCC-CceEEEEecHHh-CCCCCCCEEEEEEhhhhHhc------CCHHHHHHHHHHHcCCCCEEE
Confidence 222 258899999866 56677899999999999876 356799999999999999999
Q ss_pred EeeCCCchhhhhh---hhhhhhhccccccc-cCchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVSYEKNR---RVSETTATNFQNIK-LYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+............ ....... ...+.. +...++.+ +++++||++++...
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 138 LVDNSAPENDAFDVFYNYVEKER-DYSHHRAWKKSDWLK-MLEEAGFELEELHC 189 (260)
T ss_dssp EEEEEBCSSHHHHHHHHHHHHHH-CTTCCCCCBHHHHHH-HHHHHTCEEEEEEE
T ss_pred EEEcCCCCCHHHHHHHHHHHHhc-CccccCCCCHHHHHH-HHHHCCCeEEEEEE
Confidence 9532111100000 0001111 111222 34455555 89999999876643
No 14
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.71 E-value=1.2e-16 Score=141.72 Aligned_cols=102 Identities=21% Similarity=0.379 Sum_probs=86.6
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..+++..+ .+|+|+|+|+.+++.|+....
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~---------------------------------- 88 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT---------------------------------- 88 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC----------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc----------------------------------
Confidence 688999999999999999988743 389999999999999887421
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
..++.+...|+.+ .+.+.++||+|+|..+++|+ ++...+++++.++|+|||.+++
T Consensus 89 ------------------~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~LkpgG~l~~ 143 (253)
T 3g5l_A 89 ------------------SPVVCYEQKAIED-IAIEPDAYNVVLSSLALHYI------ASFDDICKKVYINLKSSGSFIF 143 (253)
T ss_dssp ------------------CTTEEEEECCGGG-CCCCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEEEE
T ss_pred ------------------cCCeEEEEcchhh-CCCCCCCeEEEEEchhhhhh------hhHHHHHHHHHHHcCCCcEEEE
Confidence 2358899999876 46667899999999999766 4678999999999999999999
Q ss_pred ee
Q 047406 222 EP 223 (290)
Q Consensus 222 ~~ 223 (290)
..
T Consensus 144 ~~ 145 (253)
T 3g5l_A 144 SV 145 (253)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 15
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.71 E-value=2.3e-16 Score=141.58 Aligned_cols=153 Identities=21% Similarity=0.271 Sum_probs=111.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.++..+++|+|+|+.+++.|+.++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 83 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEK-------------------------------- 83 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 578999999999999999999988778999999999999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++ .++.+...|+.+ .+.+.++||+|+|..+++|+ .+...++.++.++|+|||+++
T Consensus 84 ----------------~~~-~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L~pgG~l~ 139 (276)
T 3mgg_A 84 ----------------NGI-KNVKFLQANIFS-LPFEDSSFDHIFVCFVLEHL------QSPEEALKSLKKVLKPGGTIT 139 (276)
T ss_dssp ----------------TTC-CSEEEEECCGGG-CCSCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------cCC-CCcEEEEccccc-CCCCCCCeeEEEEechhhhc------CCHHHHHHHHHHHcCCCcEEE
Confidence 222 258899999876 46667899999999999766 346799999999999999999
Q ss_pred EeeCCCchhhh---hhhhhhhhh------ccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVSYEK---NRRVSETTA------TNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~~~~---~~~~~~~~~------~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+..+.+.+... ......... .......+...++.. +++++||+++++..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 140 VIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYP-LLQESGFEKIRVEP 197 (276)
T ss_dssp EEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHH-HHHHTTCEEEEEEE
T ss_pred EEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHH-HHHHCCCCeEEEee
Confidence 97643322100 000000000 011111233455555 89999999887753
No 16
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.71 E-value=1.9e-16 Score=136.95 Aligned_cols=145 Identities=15% Similarity=0.137 Sum_probs=109.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|+.++..
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------------------- 84 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNK------------------------------- 84 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 577899999999999999999987 456999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++. ++.+...|+.+ .+.+.++||+|+|..+++++ ++...++.++.++|+|||.+
T Consensus 85 -----------------~~~~-~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~LkpgG~l 139 (219)
T 3dh0_A 85 -----------------LGLK-NVEVLKSEENK-IPLPDNTVDFIFMAFTFHEL------SEPLKFLEELKRVAKPFAYL 139 (219)
T ss_dssp -----------------HTCT-TEEEEECBTTB-CSSCSSCEEEEEEESCGGGC------SSHHHHHHHHHHHEEEEEEE
T ss_pred -----------------cCCC-cEEEEeccccc-CCCCCCCeeEEEeehhhhhc------CCHHHHHHHHHHHhCCCeEE
Confidence 2222 58899999866 45567889999999999765 35689999999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++.......... .......+..+++.. +++++||++++....
T Consensus 140 ~i~~~~~~~~~~---------~~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~~ 181 (219)
T 3dh0_A 140 AIIDWKKEERDK---------GPPPEEVYSEWEVGL-ILEDAGIRVGRVVEV 181 (219)
T ss_dssp EEEEECSSCCSS---------SCCGGGSCCHHHHHH-HHHHTTCEEEEEEEE
T ss_pred EEEEeccccccc---------CCchhcccCHHHHHH-HHHHCCCEEEEEEee
Confidence 996422111100 000111234455555 899999999887654
No 17
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.70 E-value=1.5e-16 Score=142.27 Aligned_cols=154 Identities=16% Similarity=0.216 Sum_probs=111.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.++..+..
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 106 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATA-------------------------------- 106 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHh--------------------------------
Confidence 478899999999999999998876 46999999999999999987664
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+ ++.++++||+|+|..+++|+ .+...++.++.++|+|||.++
T Consensus 107 ----------------~~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L~pgG~l~ 163 (273)
T 3bus_A 107 ----------------AGLANRVTFSYADAMD-LPFEDASFDAVWALESLHHM------PDRGRALREMARVLRPGGTVA 163 (273)
T ss_dssp ----------------TTCTTTEEEEECCTTS-CCSCTTCEEEEEEESCTTTS------SCHHHHHHHHHTTEEEEEEEE
T ss_pred ----------------cCCCcceEEEECcccc-CCCCCCCccEEEEechhhhC------CCHHHHHHHHHHHcCCCeEEE
Confidence 3344568999999876 56667899999999999766 346899999999999999999
Q ss_pred EeeCCCchh--hhhhhhhhhhhccccccc-cCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSY--EKNRRVSETTATNFQNIK-LYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+....+... .............+.+.. +..+++.+ +++++||++++....
T Consensus 164 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~~ 216 (273)
T 3bus_A 164 IADFVLLAPVEGAKKEAVDAFRAGGGVLSLGGIDEYES-DVRQAELVVTSTVDI 216 (273)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHHTCCCCCCHHHHHH-HHHHTTCEEEEEEEC
T ss_pred EEEeeccCCCChhHHHHHHHHHhhcCccCCCCHHHHHH-HHHHcCCeEEEEEEC
Confidence 965322110 000011111111222223 34455554 899999999876554
No 18
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.70 E-value=1.3e-16 Score=146.91 Aligned_cols=154 Identities=14% Similarity=0.160 Sum_probs=112.6
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|+.++..
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~------------------------------- 162 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARE------------------------------- 162 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHH-------------------------------
Confidence 3578899999999999999999876 45899999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+...|+.+ .+.+.+.||+|+|..+++|+ +...++.++.++|+|||++
T Consensus 163 -----------------~~~~~~v~~~~~d~~~-~~~~~~~fD~V~~~~~l~~~-------~~~~~l~~~~~~LkpgG~l 217 (312)
T 3vc1_A 163 -----------------LRIDDHVRSRVCNMLD-TPFDKGAVTASWNNESTMYV-------DLHDLFSEHSRFLKVGGRY 217 (312)
T ss_dssp -----------------TTCTTTEEEEECCTTS-CCCCTTCEEEEEEESCGGGS-------CHHHHHHHHHHHEEEEEEE
T ss_pred -----------------cCCCCceEEEECChhc-CCCCCCCEeEEEECCchhhC-------CHHHHHHHHHHHcCCCcEE
Confidence 4455579999999976 46667899999999999755 1789999999999999999
Q ss_pred EEeeCCCchhh-hhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYE-KNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++......... ........+...+..-....+++.+ +++++||++++...-
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 218 VTITGCWNPRYGQPSKWVSQINAHFECNIHSRREYLR-AMADNRLVPHTIVDL 269 (312)
T ss_dssp EEEEEEECTTTCSCCHHHHHHHHHHTCCCCBHHHHHH-HHHTTTEEEEEEEEC
T ss_pred EEEEccccccccchhHHHHHHHhhhcCCCCCHHHHHH-HHHHCCCEEEEEEeC
Confidence 99653222211 1111111111111111234455555 899999998877543
No 19
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.70 E-value=1.4e-16 Score=139.11 Aligned_cols=146 Identities=18% Similarity=0.263 Sum_probs=106.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++..+ +|+|+|+|+.+++.|+....
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~--------------------------------- 85 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK--------------------------------- 85 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC---------------------------------
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh---------------------------------
Confidence 5788999999999999999988743 89999999999999987421
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH-hhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW-KLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~-~~LkpgG~l 219 (290)
. ++.+.+.|+.+. .++++||+|+|..+++|+ ++...++.++. ++|+|||.+
T Consensus 86 -----------------~---~v~~~~~d~~~~--~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~~LkpgG~l 137 (250)
T 2p7i_A 86 -----------------D---GITYIHSRFEDA--QLPRRYDNIVLTHVLEHI------DDPVALLKRINDDWLAEGGRL 137 (250)
T ss_dssp -----------------S---CEEEEESCGGGC--CCSSCEEEEEEESCGGGC------SSHHHHHHHHHHTTEEEEEEE
T ss_pred -----------------C---CeEEEEccHHHc--CcCCcccEEEEhhHHHhh------cCHHHHHHHHHHHhcCCCCEE
Confidence 1 588889998763 356889999999999766 35689999999 999999999
Q ss_pred EEeeCCCchhhhhhhh-hhhh---------hccccccc-cCchhHHHHHHHHcCCeeeEecc
Q 047406 220 VLEPQPWVSYEKNRRV-SETT---------ATNFQNIK-LYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~-~~~~---------~~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
++..++.......... .... .....+.. +.++++.+ +++++||++++...
T Consensus 138 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 138 FLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLER-DASRAGLQVTYRSG 198 (250)
T ss_dssp EEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHH-HHHHTTCEEEEEEE
T ss_pred EEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHH-HHHHCCCeEEEEee
Confidence 9977654332211100 0000 00112223 44455555 89999999988753
No 20
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.70 E-value=3.1e-16 Score=131.88 Aligned_cols=155 Identities=19% Similarity=0.259 Sum_probs=115.2
Q ss_pred HhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCc
Q 047406 55 VLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGL 134 (290)
Q Consensus 55 ~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (290)
.+...+.++.+|||+|||+|.++..++.. ..+++++|+|+.+++.++.++.
T Consensus 39 ~l~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~--------------------------- 89 (195)
T 3cgg_A 39 LIDAMAPRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFP--------------------------- 89 (195)
T ss_dssp HHHHHSCTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCT---------------------------
T ss_pred HHHHhccCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCC---------------------------
Confidence 34444568899999999999999998886 4589999999999999887421
Q ss_pred chhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEc-hhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 135 EKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCL-SVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~-~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
++.+...|+.+ .+.+.++||+|+|. .+++++ ..+....++.++.++|
T Consensus 90 ---------------------------~~~~~~~d~~~-~~~~~~~~D~i~~~~~~~~~~----~~~~~~~~l~~~~~~l 137 (195)
T 3cgg_A 90 ---------------------------EARWVVGDLSV-DQISETDFDLIVSAGNVMGFL----AEDGREPALANIHRAL 137 (195)
T ss_dssp ---------------------------TSEEEECCTTT-SCCCCCCEEEEEECCCCGGGS----CHHHHHHHHHHHHHHE
T ss_pred ---------------------------CCcEEEccccc-CCCCCCceeEEEECCcHHhhc----ChHHHHHHHHHHHHHh
Confidence 36788888866 34556789999998 677544 2456789999999999
Q ss_pred CCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccCCCCCCCCCCCCcceeeecC
Q 047406 214 RPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGSGGLSSSKTGFNRPIFLFRK 290 (290)
Q Consensus 214 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~~~~~~~~~~~~~~~~~~~k 290 (290)
+|||.+++..+... .+...++.. +++++||++++.................+.++||
T Consensus 138 ~~~G~l~~~~~~~~-------------------~~~~~~~~~-~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~v~~k 194 (195)
T 3cgg_A 138 GADGRAVIGFGAGR-------------------GWVFGDFLE-VAERVGLELENAFESWDLKPFVQGSEFLVAVFTK 194 (195)
T ss_dssp EEEEEEEEEEETTS-------------------SCCHHHHHH-HHHHHTEEEEEEESSTTCCBCCTTCSEEEEEEEE
T ss_pred CCCCEEEEEeCCCC-------------------CcCHHHHHH-HHHHcCCEEeeeecccccCcCCCCCcEEEEEEec
Confidence 99999999654211 134455555 7899999999887764443334445556666664
No 21
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.70 E-value=3.1e-16 Score=135.90 Aligned_cols=116 Identities=18% Similarity=0.281 Sum_probs=93.0
Q ss_pred HHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCC
Q 047406 54 KVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDG 133 (290)
Q Consensus 54 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (290)
+.+.+.+.++.+|||+|||+|.++..++...+ +++|+|+|+.+++.|+.+...
T Consensus 30 ~~l~~~~~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~------------------------- 82 (227)
T 1ve3_A 30 PLLMKYMKKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKS------------------------- 82 (227)
T ss_dssp HHHHHSCCSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHH-------------------------
T ss_pred HHHHHhcCCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHh-------------------------
Confidence 34445556789999999999999999888754 899999999999999987654
Q ss_pred cchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 134 LEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
.+ .++.+...|+.+ .+.+.++||+|+|..++++.+ ..+...++.++.++|
T Consensus 83 -----------------------~~--~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~~~~----~~~~~~~l~~~~~~L 132 (227)
T 1ve3_A 83 -----------------------RE--SNVEFIVGDARK-LSFEDKTFDYVIFIDSIVHFE----PLELNQVFKEVRRVL 132 (227)
T ss_dssp -----------------------TT--CCCEEEECCTTS-CCSCTTCEEEEEEESCGGGCC----HHHHHHHHHHHHHHE
T ss_pred -----------------------cC--CCceEEECchhc-CCCCCCcEEEEEEcCchHhCC----HHHHHHHHHHHHHHc
Confidence 11 358889999876 455567999999998854333 257789999999999
Q ss_pred CCCcEEEEeeCCC
Q 047406 214 RPGGIFVLEPQPW 226 (290)
Q Consensus 214 kpgG~l~i~~~~~ 226 (290)
+|||.+++...++
T Consensus 133 ~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 133 KPSGKFIMYFTDL 145 (227)
T ss_dssp EEEEEEEEEEECH
T ss_pred CCCcEEEEEecCh
Confidence 9999999976654
No 22
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.70 E-value=1.8e-16 Score=145.34 Aligned_cols=115 Identities=18% Similarity=0.303 Sum_probs=92.8
Q ss_pred hhhhccCCCcEEEecCCCChhhHHHH-hHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCc
Q 047406 56 LKKEWFEGKDCLDIGCNSGIITIQIA-QKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGL 134 (290)
Q Consensus 56 l~~~~~~~~~vLDiGcG~G~~~~~la-~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (290)
+...+.++.+|||||||+|.++..++ ...+..+|+|+|+|+.+++.|+.++..
T Consensus 112 l~~~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~-------------------------- 165 (305)
T 3ocj_A 112 LQRHLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAG-------------------------- 165 (305)
T ss_dssp HHHHCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTT--------------------------
T ss_pred HHhhCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHh--------------------------
Confidence 33445788999999999999999886 456677999999999999999987653
Q ss_pred chhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 135 EKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.++..++.+.+.|+.+ .+.+ ++||+|+|..+++|++ +......++.++.++|+
T Consensus 166 ----------------------~~~~~~v~~~~~d~~~-~~~~-~~fD~v~~~~~~~~~~---~~~~~~~~l~~~~~~Lk 218 (305)
T 3ocj_A 166 ----------------------HALAGQITLHRQDAWK-LDTR-EGYDLLTSNGLNIYEP---DDARVTELYRRFWQALK 218 (305)
T ss_dssp ----------------------STTGGGEEEEECCGGG-CCCC-SCEEEEECCSSGGGCC---CHHHHHHHHHHHHHHEE
T ss_pred ----------------------cCCCCceEEEECchhc-CCcc-CCeEEEEECChhhhcC---CHHHHHHHHHHHHHhcC
Confidence 3344569999999987 4555 8999999999986553 23444578999999999
Q ss_pred CCcEEEEee
Q 047406 215 PGGIFVLEP 223 (290)
Q Consensus 215 pgG~l~i~~ 223 (290)
|||++++..
T Consensus 219 pgG~l~i~~ 227 (305)
T 3ocj_A 219 PGGALVTSF 227 (305)
T ss_dssp EEEEEEEEC
T ss_pred CCeEEEEEe
Confidence 999999965
No 23
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.70 E-value=1.1e-16 Score=141.78 Aligned_cols=151 Identities=22% Similarity=0.295 Sum_probs=109.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|+.....
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 100 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSG-------------------------------- 100 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCS--------------------------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhc--------------------------------
Confidence 577899999999999999999976 45999999999999999875321
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
. .++.+...|+.+ .+.+.++||+|+|..+++|+ +.++...++.++.++|+|||.++
T Consensus 101 ------------------~-~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~----~~~~~~~~l~~~~~~L~pgG~l~ 156 (266)
T 3ujc_A 101 ------------------N-NKIIFEANDILT-KEFPENNFDLIYSRDAILAL----SLENKNKLFQKCYKWLKPTGTLL 156 (266)
T ss_dssp ------------------C-TTEEEEECCTTT-CCCCTTCEEEEEEESCGGGS----CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ------------------C-CCeEEEECcccc-CCCCCCcEEEEeHHHHHHhc----ChHHHHHHHHHHHHHcCCCCEEE
Confidence 1 468899999876 46667899999999999766 24678999999999999999999
Q ss_pred EeeCCCchhhhh-hhhhhhhhccccccc-cCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKN-RRVSETTATNFQNIK-LYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+........... ......... .+.. +..+++.+ +++++||++++....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~l~~~Gf~~~~~~~~ 206 (266)
T 3ujc_A 157 ITDYCATEKENWDDEFKEYVKQ--RKYTLITVEEYAD-ILTACNFKNVVSKDL 206 (266)
T ss_dssp EEEEEESCGGGCCHHHHHHHHH--HTCCCCCHHHHHH-HHHHTTCEEEEEEEC
T ss_pred EEEeccCCcccchHHHHHHHhc--CCCCCCCHHHHHH-HHHHcCCeEEEEEeC
Confidence 965322110000 001111110 1122 34455555 899999998876543
No 24
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.70 E-value=2.9e-16 Score=137.27 Aligned_cols=107 Identities=21% Similarity=0.431 Sum_probs=87.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+.++..
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~-------------------------------- 81 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRS-------------------------------- 81 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhh--------------------------------
Confidence 47789999999999999999887 45899999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEch-hhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLS-VTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~-vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++ ++.+.+.|+.+ .+.+ ++||+|+|.. +++|+. +.++...++.++.++|+|||.+
T Consensus 82 ----------------~~~--~~~~~~~d~~~-~~~~-~~fD~v~~~~~~l~~~~---~~~~~~~~l~~~~~~L~pgG~l 138 (246)
T 1y8c_A 82 ----------------QGL--KPRLACQDISN-LNIN-RKFDLITCCLDSTNYII---DSDDLKKYFKAVSNHLKEGGVF 138 (246)
T ss_dssp ----------------TTC--CCEEECCCGGG-CCCS-CCEEEEEECTTGGGGCC---SHHHHHHHHHHHHTTEEEEEEE
T ss_pred ----------------cCC--CeEEEeccccc-CCcc-CCceEEEEcCccccccC---CHHHHHHHHHHHHHhcCCCcEE
Confidence 122 47888888876 3444 7899999998 987652 2357889999999999999999
Q ss_pred EEeeC
Q 047406 220 VLEPQ 224 (290)
Q Consensus 220 ~i~~~ 224 (290)
++...
T Consensus 139 ~~~~~ 143 (246)
T 1y8c_A 139 IFDIN 143 (246)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99654
No 25
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.70 E-value=1.6e-16 Score=143.65 Aligned_cols=154 Identities=19% Similarity=0.270 Sum_probs=110.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..++.. ..+|+|+|+|+.+++.|+.++..
T Consensus 67 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 112 (285)
T 4htf_A 67 PQKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEA-------------------------------- 112 (285)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC--------------------------------
T ss_pred CCCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 45679999999999999999887 45999999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+..+.+.++||+|+|..+++|+ ++...++.++.++|+|||+++
T Consensus 113 ----------------~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~LkpgG~l~ 170 (285)
T 4htf_A 113 ----------------KGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWV------ADPRSVLQTLWSVLRPGGVLS 170 (285)
T ss_dssp -----------------CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGC------SCHHHHHHHHHHTEEEEEEEE
T ss_pred ----------------cCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcc------cCHHHHHHHHHHHcCCCeEEE
Confidence 3344568999999877432456899999999999766 356889999999999999999
Q ss_pred EeeCCCchhhhhhhh----hhhhh-------cccccc-ccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRV----SETTA-------TNFQNI-KLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~----~~~~~-------~~~~~~-~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+.............. ..... ...... .+.++++.+ +++++||++++....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~aGf~v~~~~~~ 232 (285)
T 4htf_A 171 LMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYL-WLEEAGWQIMGKTGV 232 (285)
T ss_dssp EEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHH-HHHHTTCEEEEEEEE
T ss_pred EEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHH-HHHHCCCceeeeeeE
Confidence 975432211100000 00000 011122 244455555 899999999977654
No 26
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.69 E-value=7.8e-16 Score=140.61 Aligned_cols=157 Identities=15% Similarity=0.184 Sum_probs=113.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.|++++..
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 117 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDE-------------------------------- 117 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHH--------------------------------
T ss_pred CCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 5788999999999999999999876 6899999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcC---CchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNW---GDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~---~~~~~~~~l~~~~~~LkpgG 217 (290)
.++..++.+...|+.+. .++||+|+|..+++++.-.. +.+....++.++.++|+|||
T Consensus 118 ----------------~~~~~~v~~~~~d~~~~----~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG 177 (302)
T 3hem_A 118 ----------------VDSPRRKEVRIQGWEEF----DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDG 177 (302)
T ss_dssp ----------------SCCSSCEEEEECCGGGC----CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTC
T ss_pred ----------------cCCCCceEEEECCHHHc----CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCc
Confidence 44555799999998762 58899999999997663111 23567899999999999999
Q ss_pred EEEEeeCCCchhhhhh--hh---------hhhhhc-cccccccC-chhHHHHHHHHcCCeeeEeccC
Q 047406 218 IFVLEPQPWVSYEKNR--RV---------SETTAT-NFQNIKLY-PKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~--~~---------~~~~~~-~~~~~~~~-~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++++............ .. ..++.. .++...+. .+++.+ +++++||++++....
T Consensus 178 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~s~~~~~~-~l~~aGf~~~~~~~~ 243 (302)
T 3hem_A 178 RMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRLPRISQVDY-YSSNAGWKVERYHRI 243 (302)
T ss_dssp EEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCCCCHHHHHH-HHHHHTCEEEEEEEC
T ss_pred EEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCCCCHHHHHH-HHHhCCcEEEEEEeC
Confidence 9999654222111100 00 012221 22222233 344544 899999999887554
No 27
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.69 E-value=3.3e-16 Score=138.16 Aligned_cols=147 Identities=17% Similarity=0.240 Sum_probs=106.7
Q ss_pred hhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 57 KKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 57 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
.+.+.++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.++.+
T Consensus 36 l~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~------------------------------- 82 (240)
T 3dli_A 36 IPYFKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK------------------------------- 82 (240)
T ss_dssp GGGTTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT-------------------------------
T ss_pred HhhhcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh-------------------------------
Confidence 344467899999999999999998887 44899999999999888652
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCC-CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR-DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
+.+...|..+.. +.++++||+|+|..+++|+. +++...++.++.++|+|
T Consensus 83 --------------------------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~----~~~~~~~l~~~~~~Lkp 132 (240)
T 3dli_A 83 --------------------------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLD----PERLFELLSLCYSKMKY 132 (240)
T ss_dssp --------------------------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSC----GGGHHHHHHHHHHHBCT
T ss_pred --------------------------cceeeccHHHHhhhcCCCCeeEEEECCchhhCC----cHHHHHHHHHHHHHcCC
Confidence 556666665522 45668999999999997663 45789999999999999
Q ss_pred CcEEEEeeCCCchhhhhhhhhhhhhccccccc-cCchhHHHHHHHHcCCeeeEeccC
Q 047406 216 GGIFVLEPQPWVSYEKNRRVSETTATNFQNIK-LYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 216 gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
||++++..+.......... .. ....+.. +.++++. .+++++||++++....
T Consensus 133 gG~l~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~l~-~~l~~aGf~~~~~~~~ 184 (240)
T 3dli_A 133 SSYIVIESPNPTSLYSLIN---FY-IDPTHKKPVHPETLK-FILEYLGFRDVKIEFF 184 (240)
T ss_dssp TCCEEEEEECTTSHHHHHH---HT-TSTTCCSCCCHHHHH-HHHHHHTCEEEEEEEE
T ss_pred CcEEEEEeCCcchhHHHHH---Hh-cCccccccCCHHHHH-HHHHHCCCeEEEEEEe
Confidence 9999997654333222111 11 1112333 3444554 4899999998877654
No 28
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.69 E-value=1.1e-16 Score=137.22 Aligned_cols=141 Identities=16% Similarity=0.147 Sum_probs=105.8
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
.+.+|||+|||+|.++..++.. ..+++|+|+|+.+++.|+.+.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~----------------------------------- 83 (203)
T 3h2b_A 41 VDGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTH----------------------------------- 83 (203)
T ss_dssp CCSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHC-----------------------------------
T ss_pred CCCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhC-----------------------------------
Confidence 3899999999999999999886 458999999999999988741
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
.++.+...|+.+ .+.+.++||+|+|..+++|+. .++...++.++.++|+|||.+++
T Consensus 84 -------------------~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~L~pgG~l~i 139 (203)
T 3h2b_A 84 -------------------PSVTFHHGTITD-LSDSPKRWAGLLAWYSLIHMG----PGELPDALVALRMAVEDGGGLLM 139 (203)
T ss_dssp -------------------TTSEEECCCGGG-GGGSCCCEEEEEEESSSTTCC----TTTHHHHHHHHHHTEEEEEEEEE
T ss_pred -------------------CCCeEEeCcccc-cccCCCCeEEEEehhhHhcCC----HHHHHHHHHHHHHHcCCCcEEEE
Confidence 147788888876 455678999999999997652 45789999999999999999999
Q ss_pred eeCCCchhhhhhhhhhhhhcccccc-ccCchhHHHHHHHHcCCeeeEeccC
Q 047406 222 EPQPWVSYEKNRRVSETTATNFQNI-KLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
........ . .......+. .+.++++.+ +++++||++++....
T Consensus 140 ~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~~ 182 (203)
T 3h2b_A 140 SFFSGPSL------E-PMYHPVATAYRWPLPELAQ-ALETAGFQVTSSHWD 182 (203)
T ss_dssp EEECCSSC------E-EECCSSSCEEECCHHHHHH-HHHHTTEEEEEEEEC
T ss_pred EEccCCch------h-hhhchhhhhccCCHHHHHH-HHHHCCCcEEEEEec
Confidence 75422210 0 001111122 244455555 899999999988765
No 29
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.68 E-value=8.3e-16 Score=142.60 Aligned_cols=154 Identities=14% Similarity=0.095 Sum_probs=114.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|..+..+++.+|..+++++|+ +.+++.|++++..
T Consensus 168 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-------------------------------- 214 (332)
T 3i53_A 168 AALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLD-------------------------------- 214 (332)
T ss_dssp GGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhh--------------------------------
Confidence 3468999999999999999999998889999999 9999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.|...|+.+ +.|. +||+|+|.+++|+ |+++....+++++.++|+|||.++
T Consensus 215 ----------------~~~~~~v~~~~~d~~~--~~p~-~~D~v~~~~vlh~----~~~~~~~~~l~~~~~~L~pgG~l~ 271 (332)
T 3i53_A 215 ----------------TGLSGRAQVVVGSFFD--PLPA-GAGGYVLSAVLHD----WDDLSAVAILRRCAEAAGSGGVVL 271 (332)
T ss_dssp ----------------TTCTTTEEEEECCTTS--CCCC-SCSEEEEESCGGG----SCHHHHHHHHHHHHHHHTTTCEEE
T ss_pred ----------------cCcCcCeEEecCCCCC--CCCC-CCcEEEEehhhcc----CCHHHHHHHHHHHHHhcCCCCEEE
Confidence 3455679999999974 3333 8999999999964 456678999999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+....+......................+.+++.+ +++++||+++++...
T Consensus 272 i~e~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~-ll~~aGf~~~~~~~~ 321 (332)
T 3i53_A 272 VIEAVAGDEHAGTGMDLRMLTYFGGKERSLAELGE-LAAQAGLAVRAAHPI 321 (332)
T ss_dssp EEECCCC---CCHHHHHHHHHHHSCCCCCHHHHHH-HHHHTTEEEEEEEEC
T ss_pred EEeecCCCCCccHHHHHHHHhhCCCCCCCHHHHHH-HHHHCCCEEEEEEEC
Confidence 96553322200000000111112222345666766 899999999998866
No 30
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.68 E-value=1.1e-16 Score=144.26 Aligned_cols=180 Identities=20% Similarity=0.209 Sum_probs=113.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..++.. +..+|+|+|+|+.+++.|++++.. ....++|.+.+.+.+..+.....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~-~~~~v~g~D~s~~~l~~a~~~~~~---------~~~~~d~s~~~~~~~~~~~~~~~ 123 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACD-SFQDITLSDFTDRNREELEKWLKK---------EPGAYDWTPAVKFACELEGNSGR 123 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGG-TEEEEEEEESCHHHHHHHHHHHHT---------CTTCCCCHHHHHHHHHHTTCGGG
T ss_pred CCCceEEEeCCCccHHHHHHHHh-hhcceeeccccHHHHHHHHHHHhc---------CCCcccchHHHHHHHhcCCCCcc
Confidence 46789999999999887765554 334799999999999999987654 11234444444444332211000
Q ss_pred HHHHHHhhhcCCCccccCcCccee-EeecccccCCCC---CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVS-FKQENFVHGRDS---PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~-~~~~d~~~~~~~---~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
+.+ .. ..+...+. +.+.|+.+..+. ..++||+|+|..+++|+.. ..+++..++.+++++||||
T Consensus 124 ~~~-~~----------~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~--~~~~~~~~l~~i~r~LKPG 190 (263)
T 2a14_A 124 WEE-KE----------EKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACC--SLDAYRAALCNLASLLKPG 190 (263)
T ss_dssp HHH-HH----------HHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEE
T ss_pred hhh-HH----------HHHHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcC--CHHHHHHHHHHHHHHcCCC
Confidence 000 00 00111243 788888764332 2468999999999987632 2357789999999999999
Q ss_pred cEEEEeeCCCc-hhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 217 GIFVLEPQPWV-SYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 217 G~l~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
|+|++....-. .+. .....+.+..+..+++.+ ++.++||++++....
T Consensus 191 G~li~~~~~~~~~~~-------~g~~~~~~~~~~~~~l~~-~l~~aGF~i~~~~~~ 238 (263)
T 2a14_A 191 GHLVTTVTLRLPSYM-------VGKREFSCVALEKGEVEQ-AVLDAGFDIEQLLHS 238 (263)
T ss_dssp EEEEEEEESSCCEEE-------ETTEEEECCCCCHHHHHH-HHHHTTEEEEEEEEE
T ss_pred cEEEEEEeecCccce-------eCCeEeeccccCHHHHHH-HHHHCCCEEEEEeec
Confidence 99999742100 000 000112233345566655 899999999887654
No 31
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.68 E-value=3.5e-16 Score=138.11 Aligned_cols=147 Identities=17% Similarity=0.150 Sum_probs=107.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||||||+|.++..+++.. ..+|+++|+|+.+++.|+.++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~--------------------------------- 124 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGE--------------------------------- 124 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGG---------------------------------
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhh---------------------------------
Confidence 57899999999999999988865 45899999999999999886432
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
.+ ..++.+...|+.+ .+.+.++||+|+|..+++++. ++....++.++.++|+|||++++
T Consensus 125 ---------------~~-~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~l~i 183 (241)
T 2ex4_A 125 ---------------EG-KRVRNYFCCGLQD-FTPEPDSYDVIWIQWVIGHLT----DQHLAEFLRRCKGSLRPNGIIVI 183 (241)
T ss_dssp ---------------GG-GGEEEEEECCGGG-CCCCSSCEEEEEEESCGGGSC----HHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---------------cC-CceEEEEEcChhh-cCCCCCCEEEEEEcchhhhCC----HHHHHHHHHHHHHhcCCCeEEEE
Confidence 11 1247888888766 455567899999999997652 34567999999999999999999
Q ss_pred eeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 222 EPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
....... .. .............+++.+ +++++||++++....
T Consensus 184 ~~~~~~~----~~---~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~~ 225 (241)
T 2ex4_A 184 KDNMAQE----GV---ILDDVDSSVCRDLDVVRR-IICSAGLSLLAEERQ 225 (241)
T ss_dssp EEEEBSS----SE---EEETTTTEEEEBHHHHHH-HHHHTTCCEEEEEEC
T ss_pred EEccCCC----cc---eecccCCcccCCHHHHHH-HHHHcCCeEEEeeec
Confidence 6542211 00 000011111234555555 899999999988766
No 32
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.68 E-value=2.6e-16 Score=135.80 Aligned_cols=151 Identities=19% Similarity=0.234 Sum_probs=111.0
Q ss_pred chhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhh
Q 047406 50 DPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIE 129 (290)
Q Consensus 50 ~~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (290)
.+.+..+...+.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++.++
T Consensus 31 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~----------------------- 85 (211)
T 3e23_A 31 SATLTKFLGELPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRL----------------------- 85 (211)
T ss_dssp CHHHHHHHTTSCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH-----------------------
T ss_pred hHHHHHHHHhcCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhc-----------------------
Confidence 5566666677778999999999999999999886 459999999999999998753
Q ss_pred ccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHH
Q 047406 130 KGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRI 209 (290)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~ 209 (290)
.+.+...|+.+ .+ +.++||+|+|..+++++. .++...++.++
T Consensus 86 --------------------------------~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~~----~~~~~~~l~~~ 127 (211)
T 3e23_A 86 --------------------------------GRPVRTMLFHQ-LD-AIDAYDAVWAHACLLHVP----RDELADVLKLI 127 (211)
T ss_dssp --------------------------------TSCCEECCGGG-CC-CCSCEEEEEECSCGGGSC----HHHHHHHHHHH
T ss_pred --------------------------------CCceEEeeecc-CC-CCCcEEEEEecCchhhcC----HHHHHHHHHHH
Confidence 24566677665 34 568999999999997653 46788999999
Q ss_pred HhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcC-CeeeEeccC
Q 047406 210 WKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIG-FRTVEDIGS 271 (290)
Q Consensus 210 ~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G-f~~v~~~~~ 271 (290)
.++|+|||++++...+...... ..... ....+..+++.+ +++++| |++++....
T Consensus 128 ~~~LkpgG~l~~~~~~~~~~~~-----~~~~~--~~~~~~~~~~~~-~l~~aG~f~~~~~~~~ 182 (211)
T 3e23_A 128 WRALKPGGLFYASYKSGEGEGR-----DKLAR--YYNYPSEEWLRA-RYAEAGTWASVAVESS 182 (211)
T ss_dssp HHHEEEEEEEEEEEECCSSCEE-----CTTSC--EECCCCHHHHHH-HHHHHCCCSEEEEEEE
T ss_pred HHhcCCCcEEEEEEcCCCcccc-----cccch--hccCCCHHHHHH-HHHhCCCcEEEEEEec
Confidence 9999999999997543221100 00000 111234455555 899999 999887654
No 33
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.67 E-value=3.9e-16 Score=135.50 Aligned_cols=167 Identities=22% Similarity=0.265 Sum_probs=112.4
Q ss_pred HHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCC
Q 047406 54 KVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDG 133 (290)
Q Consensus 54 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (290)
..+...+.++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.++.++...+
T Consensus 22 ~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~----------------------- 76 (235)
T 3sm3_A 22 PIIHNYLQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPG----------------------- 76 (235)
T ss_dssp TTHHHHCCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCS-----------------------
T ss_pred HHHHHhCCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcC-----------------------
Confidence 345555678899999999999999999887 4599999999999999988643200
Q ss_pred cchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 134 LEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
. ......++.+...|+.. .+.+.++||+|+|..+++++. +......++.++.++|
T Consensus 77 ~---------------------~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~l~~~~---~~~~~~~~l~~~~~~L 131 (235)
T 3sm3_A 77 L---------------------NQKTGGKAEFKVENASS-LSFHDSSFDFAVMQAFLTSVP---DPKERSRIIKEVFRVL 131 (235)
T ss_dssp C---------------------CSSSSCEEEEEECCTTS-CCSCTTCEEEEEEESCGGGCC---CHHHHHHHHHHHHHHE
T ss_pred C---------------------ccccCcceEEEEecccc-cCCCCCceeEEEEcchhhcCC---CHHHHHHHHHHHHHHc
Confidence 0 00112358899999876 456678999999999997652 2244558999999999
Q ss_pred CCCcEEEEeeCC--Cchhhhhhhh-hhhhh---------c-------cccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 214 RPGGIFVLEPQP--WVSYEKNRRV-SETTA---------T-------NFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 214 kpgG~l~i~~~~--~~~~~~~~~~-~~~~~---------~-------~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+|||.+++.... |......... ..... . ......+..+++.+ +++++||+++++...
T Consensus 132 ~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-ll~~aGf~~~~~~~~ 207 (235)
T 3sm3_A 132 KPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVF-LLTDCRFEIDYFRVK 207 (235)
T ss_dssp EEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHH-HHHTTTEEEEEEEEE
T ss_pred CCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHH-HHHHcCCEEEEEEec
Confidence 999999996432 1111000000 00000 0 00111244555555 899999999988654
No 34
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.67 E-value=1.1e-15 Score=138.07 Aligned_cols=153 Identities=15% Similarity=0.215 Sum_probs=110.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.++. +|+|+|+|+.+++.|+..+..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~-------------------------------- 109 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVAN-------------------------------- 109 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHT--------------------------------
T ss_pred CCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 57889999999999999999976655 999999999999999987653
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+ . + ++||+|+|..+++++. .++...++.++.++|+|||.++
T Consensus 110 ----------------~~~~~~~~~~~~d~~~-~--~-~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~l~ 165 (287)
T 1kpg_A 110 ----------------SENLRSKRVLLAGWEQ-F--D-EPVDRIVSIGAFEHFG----HERYDAFFSLAHRLLPADGVML 165 (287)
T ss_dssp ----------------CCCCSCEEEEESCGGG-C--C-CCCSEEEEESCGGGTC----TTTHHHHHHHHHHHSCTTCEEE
T ss_pred ----------------cCCCCCeEEEECChhh-C--C-CCeeEEEEeCchhhcC----hHHHHHHHHHHHHhcCCCCEEE
Confidence 3344568899999865 2 3 7899999999997652 3577899999999999999999
Q ss_pred EeeCCCchhhh-----------hhhhhhhhh-cccccccc-CchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEK-----------NRRVSETTA-TNFQNIKL-YPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~-----------~~~~~~~~~-~~~~~~~~-~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+.......... ......++. ..+.+..+ .++++.+ +++++||++++....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 166 LHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLPSIPMVQE-CASANGFTVTRVQSL 228 (287)
T ss_dssp EEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHHHH-HHHTTTCEEEEEEEC
T ss_pred EEEecCCCccccccccccccccccchhhhHHheeCCCCCCCCHHHHHH-HHHhCCcEEEEEEeC
Confidence 96543221111 001111111 12222233 3455544 899999999887543
No 35
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.67 E-value=4.6e-16 Score=138.86 Aligned_cols=108 Identities=18% Similarity=0.355 Sum_probs=87.6
Q ss_pred HhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCc
Q 047406 55 VLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGL 134 (290)
Q Consensus 55 ~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (290)
.+....+++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.|+.+..
T Consensus 43 ~l~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~~~--------------------------- 93 (263)
T 3pfg_A 43 LVRRHSPKAASLLDVACGTGMHLRHLADSF--GTVEGLELSADMLAIARRRNP--------------------------- 93 (263)
T ss_dssp HHHHHCTTCCEEEEETCTTSHHHHHHTTTS--SEEEEEESCHHHHHHHHHHCT---------------------------
T ss_pred HHHhhCCCCCcEEEeCCcCCHHHHHHHHcC--CeEEEEECCHHHHHHHHhhCC---------------------------
Confidence 344445677999999999999999998873 489999999999999987421
Q ss_pred chhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEch-hhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 135 EKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLS-VTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~-vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
++.+.+.|+.+ .+. .++||+|+|.. +++|+. ..++...++.++.++|
T Consensus 94 ---------------------------~~~~~~~d~~~-~~~-~~~fD~v~~~~~~l~~~~---~~~~~~~~l~~~~~~L 141 (263)
T 3pfg_A 94 ---------------------------DAVLHHGDMRD-FSL-GRRFSAVTCMFSSIGHLA---GQAELDAALERFAAHV 141 (263)
T ss_dssp ---------------------------TSEEEECCTTT-CCC-SCCEEEEEECTTGGGGSC---HHHHHHHHHHHHHHTE
T ss_pred ---------------------------CCEEEECChHH-CCc-cCCcCEEEEcCchhhhcC---CHHHHHHHHHHHHHhc
Confidence 47888999876 333 68899999997 887662 1256789999999999
Q ss_pred CCCcEEEEee
Q 047406 214 RPGGIFVLEP 223 (290)
Q Consensus 214 kpgG~l~i~~ 223 (290)
+|||.+++..
T Consensus 142 ~pgG~l~i~~ 151 (263)
T 3pfg_A 142 LPDGVVVVEP 151 (263)
T ss_dssp EEEEEEEECC
T ss_pred CCCcEEEEEe
Confidence 9999999963
No 36
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.67 E-value=5.2e-16 Score=134.32 Aligned_cols=149 Identities=17% Similarity=0.212 Sum_probs=106.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++.++.
T Consensus 44 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~--------------------------------- 88 (220)
T 3hnr_A 44 KSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLP--------------------------------- 88 (220)
T ss_dssp TCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSC---------------------------------
T ss_pred cCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCC---------------------------------
Confidence 37889999999999999999886 4599999999999999887421
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++.+...|+.+ .+.+ ++||+|+|..+++|+. +.....++.++.++|+|||.++
T Consensus 89 --------------------~~~~~~~~d~~~-~~~~-~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~l~ 142 (220)
T 3hnr_A 89 --------------------KEFSITEGDFLS-FEVP-TSIDTIVSTYAFHHLT----DDEKNVAIAKYSQLLNKGGKIV 142 (220)
T ss_dssp --------------------TTCCEESCCSSS-CCCC-SCCSEEEEESCGGGSC----HHHHHHHHHHHHHHSCTTCEEE
T ss_pred --------------------CceEEEeCChhh-cCCC-CCeEEEEECcchhcCC----hHHHHHHHHHHHHhcCCCCEEE
Confidence 257888889876 3555 8999999999997663 3344559999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhc-c-------cccccc-CchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRVSETTAT-N-------FQNIKL-YPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~-~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+..+.+............... . .....+ .++++.+ +++++||+++.....
T Consensus 143 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGf~v~~~~~~ 201 (220)
T 3hnr_A 143 FADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQT-IFENNGFHVTFTRLN 201 (220)
T ss_dssp EEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHH-HHHHTTEEEEEEECS
T ss_pred EEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHH-HHHHCCCEEEEeecc
Confidence 986554333222211111111 1 111122 3455544 899999998766543
No 37
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.67 E-value=1.3e-15 Score=134.71 Aligned_cols=152 Identities=14% Similarity=0.193 Sum_probs=108.5
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||+|||+|.++..++... .+|+|+|+|+.+++.++.++..
T Consensus 19 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~------------------------------- 65 (239)
T 1xxl_A 19 CRAEHRVLDIGAGAGHTALAFSPYV--QECIGVDATKEMVEVASSFAQE------------------------------- 65 (239)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred cCCCCEEEEEccCcCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 3578999999999999999998874 3899999999999999987654
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++ .++.+...|+.+ ++.++++||+|+|..+++|+ .+...++.++.++|+|||.+
T Consensus 66 -----------------~~~-~~v~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~LkpgG~l 120 (239)
T 1xxl_A 66 -----------------KGV-ENVRFQQGTAES-LPFPDDSFDIITCRYAAHHF------SDVRKAVREVARVLKQDGRF 120 (239)
T ss_dssp -----------------HTC-CSEEEEECBTTB-CCSCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEE
T ss_pred -----------------cCC-CCeEEEeccccc-CCCCCCcEEEEEECCchhhc------cCHHHHHHHHHHHcCCCcEE
Confidence 122 258888999866 56667899999999999765 35789999999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhh--ccccccc-cCchhHHHHHHHHcCCeeeEecc
Q 047406 220 VLEPQPWVSYEKNRRVSETTA--TNFQNIK-LYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
++................... ....+.. +...++.+ +++++||++++...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~aGf~~~~~~~ 173 (239)
T 1xxl_A 121 LLVDHYAPEDPVLDEFVNHLNRLRDPSHVRESSLSEWQA-MFSANQLAYQDIQK 173 (239)
T ss_dssp EEEEECBCSSHHHHHHHHHHHHHHCTTCCCCCBHHHHHH-HHHHTTEEEEEEEE
T ss_pred EEEEcCCCCChhHHHHHHHHHHhccccccCCCCHHHHHH-HHHHCCCcEEEEEe
Confidence 996432211111111111000 0112222 34455555 89999999877654
No 38
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.66 E-value=1.8e-15 Score=142.74 Aligned_cols=156 Identities=13% Similarity=0.143 Sum_probs=114.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
....+|||||||+|.++..+++.+|..+++++|+ +.+++.|+.++..
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-------------------------------- 224 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAG-------------------------------- 224 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTT--------------------------------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHh--------------------------------
Confidence 3668999999999999999999999889999999 9999999886543
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCC-CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR-DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+...|+.+.. +.+ ++||+|++..++|+ |+++....+++++.+.|+|||.+
T Consensus 225 ----------------~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~----~~~~~~~~~l~~~~~~L~pgG~l 283 (363)
T 3dp7_A 225 ----------------LSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDC----FSEEEVISILTRVAQSIGKDSKV 283 (363)
T ss_dssp ----------------CTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTT----SCHHHHHHHHHHHHHHCCTTCEE
T ss_pred ----------------cCcccceEEEEccccccCCCCC-CCcCEEEEechhhh----CCHHHHHHHHHHHHHhcCCCcEE
Confidence 334457999999997742 334 78999999999863 45677889999999999999999
Q ss_pred EEeeCCCchhhhhhh--------hhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRR--------VSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++....+........ ..............+.+++.+ +++++||+++++...
T Consensus 284 ~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~-ll~~AGf~~v~~~~~ 342 (363)
T 3dp7_A 284 YIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIR-CIENAGLEVEEIQDN 342 (363)
T ss_dssp EEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHH-HHHTTTEEESCCCCC
T ss_pred EEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHH-HHHHcCCeEEEEEeC
Confidence 996544322111100 000001111122345666666 899999999988765
No 39
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.66 E-value=8.1e-16 Score=135.72 Aligned_cols=147 Identities=16% Similarity=0.223 Sum_probs=108.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..++... ..+|+++|+|+.+++.|+.++..
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 138 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAG-------------------------------- 138 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTT--------------------------------
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhcc--------------------------------
Confidence 367899999999999999988875 45799999999999999885432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++.+.+.|+.+ .+.+.++||+|+|..+++|+. +++...++.++.++|+|||+++
T Consensus 139 -------------------~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~l~ 194 (254)
T 1xtp_A 139 -------------------MPVGKFILASMET-ATLPPNTYDLIVIQWTAIYLT----DADFVKFFKHCQQALTPNGYIF 194 (254)
T ss_dssp -------------------SSEEEEEESCGGG-CCCCSSCEEEEEEESCGGGSC----HHHHHHHHHHHHHHEEEEEEEE
T ss_pred -------------------CCceEEEEccHHH-CCCCCCCeEEEEEcchhhhCC----HHHHHHHHHHHHHhcCCCeEEE
Confidence 1358889999876 455668999999999997652 3568899999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+........ .. ............++++.+ +++++||++++....
T Consensus 195 i~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 195 FKENCSTGD---RF---LVDKEDSSLTRSDIHYKR-LFNESGVRVVKEAFQ 238 (254)
T ss_dssp EEEEBC--C---CE---EEETTTTEEEBCHHHHHH-HHHHHTCCEEEEEEC
T ss_pred EEecCCCcc---cc---eecccCCcccCCHHHHHH-HHHHCCCEEEEeeec
Confidence 976321110 00 000111122234455555 899999999988766
No 40
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.65 E-value=1.1e-15 Score=134.08 Aligned_cols=143 Identities=22% Similarity=0.269 Sum_probs=107.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|+.++..
T Consensus 65 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 110 (235)
T 3lcc_A 65 LPLGRALVPGCGGGHDVVAMASP--ERFVVGLDISESALAKANETYGS-------------------------------- 110 (235)
T ss_dssp SCCEEEEEETCTTCHHHHHHCBT--TEEEEEECSCHHHHHHHHHHHTT--------------------------------
T ss_pred CCCCCEEEeCCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHhhc--------------------------------
Confidence 35569999999999999998773 56899999999999999886543
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.+...++.+...|+.+. + +.++||+|+|..+++++. .++...++.++.++|+|||.++
T Consensus 111 ----------------~~~~~~v~~~~~d~~~~-~-~~~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~l~ 168 (235)
T 3lcc_A 111 ----------------SPKAEYFSFVKEDVFTW-R-PTELFDLIFDYVFFCAIE----PEMRPAWAKSMYELLKPDGELI 168 (235)
T ss_dssp ----------------SGGGGGEEEECCCTTTC-C-CSSCEEEEEEESSTTTSC----GGGHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------cCCCcceEEEECchhcC-C-CCCCeeEEEEChhhhcCC----HHHHHHHHHHHHHHCCCCcEEE
Confidence 22334689999999773 2 456899999999997653 4678899999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+...+.... .......+.++++.+ +++++||+++++...
T Consensus 169 ~~~~~~~~~-----------~~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 169 TLMYPITDH-----------VGGPPYKVDVSTFEE-VLVPIGFKAVSVEEN 207 (235)
T ss_dssp EEECCCSCC-----------CSCSSCCCCHHHHHH-HHGGGTEEEEEEEEC
T ss_pred EEEeccccc-----------CCCCCccCCHHHHHH-HHHHcCCeEEEEEec
Confidence 865422110 000111244556655 899999999887665
No 41
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.65 E-value=1.3e-15 Score=138.89 Aligned_cols=119 Identities=13% Similarity=0.184 Sum_probs=89.6
Q ss_pred hHHhhhhc-cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhcc
Q 047406 53 FKVLKKEW-FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKG 131 (290)
Q Consensus 53 l~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (290)
...+...+ .++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.|++++...+
T Consensus 72 ~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~--------------------- 128 (299)
T 3g2m_A 72 AREFATRTGPVSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAP--------------------- 128 (299)
T ss_dssp HHHHHHHHCCCCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSC---------------------
T ss_pred HHHHHHhhCCCCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcc---------------------
Confidence 33333333 34569999999999999999887 4589999999999999998765310
Q ss_pred CCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEc-hhhhhhhhcCCchHHHHHHHHHH
Q 047406 132 DGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCL-SVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~-~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
.++..++.+.+.|+.+ ++. .++||+|+|. .+++|+ +.++...++.++.
T Consensus 129 -------------------------~~~~~~v~~~~~d~~~-~~~-~~~fD~v~~~~~~~~~~----~~~~~~~~l~~~~ 177 (299)
T 3g2m_A 129 -------------------------ADVRDRCTLVQGDMSA-FAL-DKRFGTVVISSGSINEL----DEADRRGLYASVR 177 (299)
T ss_dssp -------------------------HHHHTTEEEEECBTTB-CCC-SCCEEEEEECHHHHTTS----CHHHHHHHHHHHH
T ss_pred -------------------------cccccceEEEeCchhc-CCc-CCCcCEEEECCcccccC----CHHHHHHHHHHHH
Confidence 0111468999999977 344 6889999976 445433 3456899999999
Q ss_pred hhcCCCcEEEEeeCC
Q 047406 211 KLLRPGGIFVLEPQP 225 (290)
Q Consensus 211 ~~LkpgG~l~i~~~~ 225 (290)
++|+|||+|++....
T Consensus 178 ~~L~pgG~l~~~~~~ 192 (299)
T 3g2m_A 178 EHLEPGGKFLLSLAM 192 (299)
T ss_dssp HHEEEEEEEEEEEEC
T ss_pred HHcCCCcEEEEEeec
Confidence 999999999996543
No 42
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.65 E-value=8.4e-16 Score=135.98 Aligned_cols=103 Identities=19% Similarity=0.389 Sum_probs=88.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++..++..+++|+|+|+.+++.++.+.
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~---------------------------------- 77 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRL---------------------------------- 77 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHS----------------------------------
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC----------------------------------
Confidence 4678999999999999999999887779999999999999987741
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++.+...|+.+ .+ +.++||+|+|..+++|+ ++...++.++.++|+|||.++
T Consensus 78 --------------------~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L~pgG~l~ 129 (259)
T 2p35_A 78 --------------------PNTNFGKADLAT-WK-PAQKADLLYANAVFQWV------PDHLAVLSQLMDQLESGGVLA 129 (259)
T ss_dssp --------------------TTSEEEECCTTT-CC-CSSCEEEEEEESCGGGS------TTHHHHHHHHGGGEEEEEEEE
T ss_pred --------------------CCcEEEECChhh-cC-ccCCcCEEEEeCchhhC------CCHHHHHHHHHHhcCCCeEEE
Confidence 247888888866 44 56889999999999877 467899999999999999999
Q ss_pred EeeCC
Q 047406 221 LEPQP 225 (290)
Q Consensus 221 i~~~~ 225 (290)
+..+.
T Consensus 130 ~~~~~ 134 (259)
T 2p35_A 130 VQMPD 134 (259)
T ss_dssp EEEEC
T ss_pred EEeCC
Confidence 97643
No 43
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.64 E-value=1.3e-15 Score=144.90 Aligned_cols=164 Identities=20% Similarity=0.259 Sum_probs=111.5
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..++.+|||||||+|.++..+++.+ +..+|+|+|+|+.+++.|++++...... + .|
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---------~-------~g------- 137 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEK---------F-------FG------- 137 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHH---------H-------HS-------
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhh---------c-------cc-------
Confidence 3578999999999999999999886 5669999999999999999987652100 0 00
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccC--C---CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHG--R---DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~---~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
.....++.+.+.|+.+. . +.++++||+|+|..+++|+ .+...++.++.++|
T Consensus 138 ------------------~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~------~d~~~~l~~~~r~L 193 (383)
T 4fsd_A 138 ------------------SPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLS------TNKLALFKEIHRVL 193 (383)
T ss_dssp ------------------STTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHE
T ss_pred ------------------ccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcC------CCHHHHHHHHHHHc
Confidence 00113688999998762 1 5667899999999999765 35789999999999
Q ss_pred CCCcEEEEeeCCCchh-hhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 214 RPGGIFVLEPQPWVSY-EKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 214 kpgG~l~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+|||+|++........ ..................+..+++.+ +++++||+.+++...
T Consensus 194 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~aGF~~v~~~~~ 251 (383)
T 4fsd_A 194 RDGGELYFSDVYADRRLSEAAQQDPILYGECLGGALYLEDFRR-LVAEAGFRDVRLVSV 251 (383)
T ss_dssp EEEEEEEEEEEEESSCCCHHHHHCHHHHHTTCTTCCBHHHHHH-HHHHTTCCCEEEEEE
T ss_pred CCCCEEEEEEeccccccCHhHhhhHHHhhcccccCCCHHHHHH-HHHHCCCceEEEEec
Confidence 9999999964321110 00000000001111111244466666 899999998866544
No 44
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.64 E-value=2e-15 Score=136.02 Aligned_cols=115 Identities=22% Similarity=0.258 Sum_probs=92.5
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
.+.++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|+.++..
T Consensus 61 ~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~------------------------------ 109 (298)
T 1ri5_A 61 YTKRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARN------------------------------ 109 (298)
T ss_dssp HCCTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHT------------------------------
T ss_pred hCCCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHh------------------------------
Confidence 3468899999999999999988775 445899999999999999987653
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCC-CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS-PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
.++..++.+.+.|+.+. +. +.++||+|+|..+++|.. ...++...++.++.++|+|||
T Consensus 110 ------------------~~~~~~v~~~~~d~~~~-~~~~~~~fD~v~~~~~l~~~~--~~~~~~~~~l~~~~~~LkpgG 168 (298)
T 1ri5_A 110 ------------------MKRRFKVFFRAQDSYGR-HMDLGKEFDVISSQFSFHYAF--STSESLDIAQRNIARHLRPGG 168 (298)
T ss_dssp ------------------SCCSSEEEEEESCTTTS-CCCCSSCEEEEEEESCGGGGG--SSHHHHHHHHHHHHHTEEEEE
T ss_pred ------------------cCCCccEEEEECCcccc-ccCCCCCcCEEEECchhhhhc--CCHHHHHHHHHHHHHhcCCCC
Confidence 23334688999998763 44 467899999999987631 123678899999999999999
Q ss_pred EEEEeeCC
Q 047406 218 IFVLEPQP 225 (290)
Q Consensus 218 ~l~i~~~~ 225 (290)
++++..+.
T Consensus 169 ~l~~~~~~ 176 (298)
T 1ri5_A 169 YFIMTVPS 176 (298)
T ss_dssp EEEEEEEC
T ss_pred EEEEEECC
Confidence 99997654
No 45
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.64 E-value=2e-15 Score=131.74 Aligned_cols=107 Identities=18% Similarity=0.361 Sum_probs=85.8
Q ss_pred hhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 56 LKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 56 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
+.....++.+|||+|||+|.++..+++..+ +++|+|+|+.+++.|+.+.
T Consensus 34 l~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~----------------------------- 82 (239)
T 3bxo_A 34 VRSRTPEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRL----------------------------- 82 (239)
T ss_dssp HHHHCTTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHC-----------------------------
T ss_pred HHHhcCCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhC-----------------------------
Confidence 444446789999999999999999998854 8999999999999987742
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEch-hhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLS-VTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~-vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.++.+...|+.+ .+. .++||+|+|.. +++|+. ..++...++.++.++|+
T Consensus 83 -------------------------~~~~~~~~d~~~-~~~-~~~~D~v~~~~~~~~~~~---~~~~~~~~l~~~~~~L~ 132 (239)
T 3bxo_A 83 -------------------------PDATLHQGDMRD-FRL-GRKFSAVVSMFSSVGYLK---TTEELGAAVASFAEHLE 132 (239)
T ss_dssp -------------------------TTCEEEECCTTT-CCC-SSCEEEEEECTTGGGGCC---SHHHHHHHHHHHHHTEE
T ss_pred -------------------------CCCEEEECCHHH-ccc-CCCCcEEEEcCchHhhcC---CHHHHHHHHHHHHHhcC
Confidence 137788888866 333 57899999754 776552 23677899999999999
Q ss_pred CCcEEEEee
Q 047406 215 PGGIFVLEP 223 (290)
Q Consensus 215 pgG~l~i~~ 223 (290)
|||.+++..
T Consensus 133 pgG~l~~~~ 141 (239)
T 3bxo_A 133 PGGVVVVEP 141 (239)
T ss_dssp EEEEEEECC
T ss_pred CCeEEEEEe
Confidence 999999975
No 46
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.64 E-value=2.2e-15 Score=136.75 Aligned_cols=108 Identities=17% Similarity=0.262 Sum_probs=91.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCC-ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNC-RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~-~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|.++..++..++. .+|+|+|+|+.+++.|+.++..
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~------------------------------- 69 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRL------------------------------- 69 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHS-------------------------------
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHh-------------------------------
Confidence 57899999999999999999998874 7999999999999999987543
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.+ .++.+.+.|+.+ ++. +++||+|+|..+++++ .+...++.++.++|+|||++
T Consensus 70 -----------------~~--~~v~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~LkpgG~l 122 (284)
T 3gu3_A 70 -----------------LP--YDSEFLEGDATE-IEL-NDKYDIAICHAFLLHM------TTPETMLQKMIHSVKKGGKI 122 (284)
T ss_dssp -----------------SS--SEEEEEESCTTT-CCC-SSCEEEEEEESCGGGC------SSHHHHHHHHHHTEEEEEEE
T ss_pred -----------------cC--CceEEEEcchhh-cCc-CCCeeEEEECChhhcC------CCHHHHHHHHHHHcCCCCEE
Confidence 11 268899999876 444 4689999999999765 35679999999999999999
Q ss_pred EEeeCCC
Q 047406 220 VLEPQPW 226 (290)
Q Consensus 220 ~i~~~~~ 226 (290)
++..+.|
T Consensus 123 ~~~~~~~ 129 (284)
T 3gu3_A 123 ICFEPHW 129 (284)
T ss_dssp EEEECCH
T ss_pred EEEecch
Confidence 9987764
No 47
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.64 E-value=4.4e-15 Score=136.38 Aligned_cols=152 Identities=16% Similarity=0.224 Sum_probs=109.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.|+..+..
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 135 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERFD-VNVIGLTLSKNQHARCEQVLAS-------------------------------- 135 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHC-CEEEEEESCHHHHHHHHHHHHT--------------------------------
T ss_pred CCcCEEEEEcccchHHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 5788999999999999999998764 4999999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++...+.+...|+.+. + ++||+|+|..+++|+. .++...++.++.++|+|||.++
T Consensus 136 ----------------~~~~~~v~~~~~d~~~~---~-~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG~l~ 191 (318)
T 2fk8_A 136 ----------------IDTNRSRQVLLQGWEDF---A-EPVDRIVSIEAFEHFG----HENYDDFFKRCFNIMPADGRMT 191 (318)
T ss_dssp ----------------SCCSSCEEEEESCGGGC---C-CCCSEEEEESCGGGTC----GGGHHHHHHHHHHHSCTTCEEE
T ss_pred ----------------cCCCCceEEEECChHHC---C-CCcCEEEEeChHHhcC----HHHHHHHHHHHHHhcCCCcEEE
Confidence 34445688999998652 2 7899999999997652 3678999999999999999999
Q ss_pred EeeCCCchhhhh-----------hhhhhhhh-cccccccc-CchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVSYEKN-----------RRVSETTA-TNFQNIKL-YPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~-~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+........... .....++. ..+....+ ..+++.+ +++++||++++...
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~-~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 192 VQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRLPSTEMMVE-HGEKAGFTVPEPLS 253 (318)
T ss_dssp EEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCCCCHHHHHH-HHHHTTCBCCCCEE
T ss_pred EEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcCCCHHHHHH-HHHhCCCEEEEEEe
Confidence 965432221110 00111111 11222233 3455544 89999999887644
No 48
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.64 E-value=5.6e-15 Score=133.76 Aligned_cols=179 Identities=15% Similarity=0.194 Sum_probs=120.4
Q ss_pred HHHHhhhcCC-CccccccccccccccccCC--C-CCchh----hHHhhhhc-cCCCcEEEecCCCChhhHHHHhHcCCce
Q 047406 18 AQQLKKRKGK-DVFPFGNYKNYYGYRIGQG--L-NEDPR----FKVLKKEW-FEGKDCLDIGCNSGIITIQIAQKFNCRS 88 (290)
Q Consensus 18 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~-~~~~~----l~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~ 88 (290)
....+...+. .+|+.| ...||+..+.-. + ...+. .+.+...+ .++.+|||+|||+|.++..++..++..+
T Consensus 57 ~~~~~~~~~~p~~~i~g-~~~f~~~~~~~~~~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~ 135 (276)
T 2b3t_A 57 ALLTRRRDGEPIAHLTG-VREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCE 135 (276)
T ss_dssp HHHHHHHTTCCHHHHSC-EEEETTEEEECCTTSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSE
T ss_pred HHHHHHHcCCChhHeee-eeEECCceEEeCCCCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCE
Confidence 3333333343 677777 667887655211 1 11121 22333333 4678999999999999999998888889
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeec
Q 047406 89 ILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQE 168 (290)
Q Consensus 89 i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 168 (290)
|+++|+|+.+++.|+.++.. .++. ++.+.+.
T Consensus 136 v~~vD~s~~~l~~a~~n~~~------------------------------------------------~~~~-~v~~~~~ 166 (276)
T 2b3t_A 136 IIAVDRMPDAVSLAQRNAQH------------------------------------------------LAIK-NIHILQS 166 (276)
T ss_dssp EEEECSSHHHHHHHHHHHHH------------------------------------------------HTCC-SEEEECC
T ss_pred EEEEECCHHHHHHHHHHHHH------------------------------------------------cCCC-ceEEEEc
Confidence 99999999999999998765 2222 4889999
Q ss_pred ccccCCCCCCCceeEEEEchhh-------------hhh---hhcC---CchHHHHHHHHHHhhcCCCcEEEEeeCCCchh
Q 047406 169 NFVHGRDSPEKYYDAILCLSVT-------------KWI---HLNW---GDDGLITLFMRIWKLLRPGGIFVLEPQPWVSY 229 (290)
Q Consensus 169 d~~~~~~~~~~~fD~I~~~~vl-------------~~~---~l~~---~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~ 229 (290)
|+.+.. +.++||+|+|+... +|. .+.. +.+....++.++.++|+|||+++++.+.
T Consensus 167 d~~~~~--~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~~---- 240 (276)
T 2b3t_A 167 DWFSAL--AGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW---- 240 (276)
T ss_dssp STTGGG--TTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECCS----
T ss_pred chhhhc--ccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEECc----
Confidence 987632 35789999997322 110 0000 0135578999999999999999997541
Q ss_pred hhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 230 EKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
...+++.+ +++++||+.++...+
T Consensus 241 ------------------~~~~~~~~-~l~~~Gf~~v~~~~d 263 (276)
T 2b3t_A 241 ------------------QQGEAVRQ-AFILAGYHDVETCRD 263 (276)
T ss_dssp ------------------SCHHHHHH-HHHHTTCTTCCEEEC
T ss_pred ------------------hHHHHHHH-HHHHCCCcEEEEEec
Confidence 11233434 788999998777655
No 49
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.63 E-value=6.7e-15 Score=135.73 Aligned_cols=155 Identities=16% Similarity=0.099 Sum_probs=112.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|..+..+++.++..+++++|++ .+++.|+.++..
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~-------------------------------- 210 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARI-------------------------------- 210 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHh--------------------------------
Confidence 56789999999999999999999888899999999 999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+. +.+ +.||+|+|.++++++ +++....+++++.++|+|||.++
T Consensus 211 ----------------~~~~~~v~~~~~d~~~~-~~~-~~~D~v~~~~~l~~~----~~~~~~~~l~~~~~~L~pgG~l~ 268 (335)
T 2r3s_A 211 ----------------QGVASRYHTIAGSAFEV-DYG-NDYDLVLLPNFLHHF----DVATCEQLLRKIKTALAVEGKVI 268 (335)
T ss_dssp ----------------HTCGGGEEEEESCTTTS-CCC-SCEEEEEEESCGGGS----CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------cCCCcceEEEecccccC-CCC-CCCcEEEEcchhccC----CHHHHHHHHHHHHHhCCCCcEEE
Confidence 23444699999998763 333 349999999998643 45677899999999999999888
Q ss_pred EeeCCCchhhh---hhhhhhh-hhccc-cccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEK---NRRVSET-TATNF-QNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~---~~~~~~~-~~~~~-~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+.......... ....... ..... ....+..+++.+ +++++||+.+++...
T Consensus 269 i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~-ll~~aGf~~~~~~~~ 323 (335)
T 2r3s_A 269 VFDFIPNSDRITPPDAAAFSLVMLATTPNGDAYTFAEYES-MFSNAGFSHSQLHSL 323 (335)
T ss_dssp EEECCCCTTSSCSHHHHHHHHHHHHHSSSCCCCCHHHHHH-HHHHTTCSEEEEECC
T ss_pred EEeecCCCCcCCchHHHHHHHHHHeeCCCCCcCCHHHHHH-HHHHCCCCeeeEEEC
Confidence 86543221100 0001100 00111 222345566665 899999999988665
No 50
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.63 E-value=1.3e-15 Score=138.35 Aligned_cols=196 Identities=15% Similarity=0.100 Sum_probs=109.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhh---ccCCcchh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIE---KGDGLEKN 137 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 137 (290)
.++.+|||||||+|.....++. .+..+|+|+|+|+.+++.|++++.... ..+.+.+..+ .-.+...
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~---------~~~~~~~~~~~v~~~~~~~~- 138 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSAC-SHFEDITMTDFLEVNRQELGRWLQEEP---------GAFNWSMYSQHACLIEGKGE- 138 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGG-GGCSEEEEECSCHHHHHHHHHHHTTCT---------TCCCCHHHHHHHHHHHCSCC-
T ss_pred CCCCeEEEECCCcChHHHHhhc-cCCCeEEEeCCCHHHHHHHHHHHhhCc---------ccccchhhhhHHHHhcCccc-
Confidence 3678999999999996554443 345599999999999999988653200 0000000000 0000000
Q ss_pred hhhHHHHHHhhhcCCCccccCc-CcceeEeecccccCCC-----CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHh
Q 047406 138 VTAAQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRD-----SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWK 211 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~-----~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~ 211 (290)
.|... ...+ ...+.+...|+.+..+ .+.++||+|+|..+++|+.. +.++...++.++.+
T Consensus 139 ------~~~~~-------~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~--~~~~~~~~l~~~~r 203 (289)
T 2g72_A 139 ------CWQDK-------ERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSP--DLASFQRALDHITT 203 (289)
T ss_dssp ------CHHHH-------HHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCS--SHHHHHHHHHHHHT
T ss_pred ------chhhh-------HHHHHhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcC--CHHHHHHHHHHHHH
Confidence 00000 0000 0125567777765333 23467999999999987531 12478899999999
Q ss_pred hcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccCCC---CCCCCCCCCcceeee
Q 047406 212 LLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGSGG---LSSSKTGFNRPIFLF 288 (290)
Q Consensus 212 ~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~~~---~~~~~~~~~~~~~~~ 288 (290)
+|+|||+|++.......+.. .....+....+.++++.+ +++++||++++...... .......+.+.+|+.
T Consensus 204 ~LkpGG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~l~~-~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (289)
T 2g72_A 204 LLRPGGHLLLIGALEESWYL------AGEARLTVVPVSEEEVRE-ALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAW 276 (289)
T ss_dssp TEEEEEEEEEEEEESCCEEE------ETTEEEECCCCCHHHHHH-HHHHTTEEEEEEEEEECCGGGCCTTBCCCEEEEEE
T ss_pred hcCCCCEEEEEEecCcceEE------cCCeeeeeccCCHHHHHH-HHHHcCCeEEEeeEeeccccccccccCcceEEEEE
Confidence 99999999996310000000 000011122244555555 89999999887754421 111223455666654
Q ss_pred c
Q 047406 289 R 289 (290)
Q Consensus 289 ~ 289 (290)
+
T Consensus 277 ~ 277 (289)
T 2g72_A 277 A 277 (289)
T ss_dssp E
T ss_pred E
Confidence 4
No 51
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.63 E-value=3e-15 Score=135.39 Aligned_cols=117 Identities=19% Similarity=0.338 Sum_probs=89.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..++.. ..+|+|+|+|+.+++.|++++.....
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~----------------------------- 104 (293)
T 3thr_A 56 HGCHRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRK----------------------------- 104 (293)
T ss_dssp TTCCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTT-----------------------------
T ss_pred cCCCEEEEecCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHhhhhccc-----------------------------
Confidence 46789999999999999999887 34999999999999999987643100
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC---CCCCceeEEEEc-hhhhhhhh-cCCchHHHHHHHHHHhhcCC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD---SPEKYYDAILCL-SVTKWIHL-NWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~fD~I~~~-~vl~~~~l-~~~~~~~~~~l~~~~~~Lkp 215 (290)
......+.+...|+.+ ++ .+.++||+|+|. ++++|+.- ..+.+....++.++.++|+|
T Consensus 105 ----------------~~~~~~~~~~~~d~~~-~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~Lkp 167 (293)
T 3thr_A 105 ----------------EPAFDKWVIEEANWLT-LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRP 167 (293)
T ss_dssp ----------------SHHHHTCEEEECCGGG-HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEE
T ss_pred ----------------ccccceeeEeecChhh-CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCC
Confidence 0011246777778765 23 456899999998 88866531 11235689999999999999
Q ss_pred CcEEEEeeCC
Q 047406 216 GGIFVLEPQP 225 (290)
Q Consensus 216 gG~l~i~~~~ 225 (290)
||++++..++
T Consensus 168 gG~l~~~~~~ 177 (293)
T 3thr_A 168 GGLLVIDHRN 177 (293)
T ss_dssp EEEEEEEEEC
T ss_pred CeEEEEEeCC
Confidence 9999997654
No 52
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.63 E-value=5.6e-15 Score=139.65 Aligned_cols=153 Identities=18% Similarity=0.215 Sum_probs=113.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.+|..+++++|+ +.+++.|++++..
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-------------------------------- 247 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTG-------------------------------- 247 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH--------------------------------
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhh--------------------------------
Confidence 4678999999999999999999998889999999 9999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++.+++.+...|+.+ +.+. .||+|+|.+++|+ |+++....+++++.++|+|||+++
T Consensus 248 ----------------~~l~~~v~~~~~d~~~--~~p~-~~D~v~~~~vlh~----~~d~~~~~~L~~~~~~L~pgG~l~ 304 (369)
T 3gwz_A 248 ----------------RGLADRCEILPGDFFE--TIPD-GADVYLIKHVLHD----WDDDDVVRILRRIATAMKPDSRLL 304 (369)
T ss_dssp ----------------TTCTTTEEEEECCTTT--CCCS-SCSEEEEESCGGG----SCHHHHHHHHHHHHTTCCTTCEEE
T ss_pred ----------------cCcCCceEEeccCCCC--CCCC-CceEEEhhhhhcc----CCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3455679999999974 3343 8999999999964 456667799999999999999999
Q ss_pred EeeCCCchhhhh-hhhhh-hhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVSYEKN-RRVSE-TTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+....+...... ..... ...........+.+++.+ +++++||++++++.
T Consensus 305 i~e~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~-ll~~aGf~~~~~~~ 355 (369)
T 3gwz_A 305 VIDNLIDERPAASTLFVDLLLLVLVGGAERSESEFAA-LLEKSGLRVERSLP 355 (369)
T ss_dssp EEEEBCCSSCCHHHHHHHHHHHHHHSCCCBCHHHHHH-HHHTTTEEEEEEEE
T ss_pred EEEeccCCCCCCchhHhhHHHHhhcCCccCCHHHHHH-HHHHCCCeEEEEEE
Confidence 954322111000 00111 111112222355666766 89999999999977
No 53
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.62 E-value=4.6e-15 Score=127.50 Aligned_cols=107 Identities=19% Similarity=0.339 Sum_probs=87.9
Q ss_pred hhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 57 KKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 57 ~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
.....++.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.++..
T Consensus 41 l~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~------------------------------- 87 (218)
T 3ou2_A 41 LRAGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRH------------------------------- 87 (218)
T ss_dssp HTTTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGG-------------------------------
T ss_pred HhcCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhc-------------------------------
Confidence 344567789999999999999999887 45999999999999988761
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
+ ..++.+...|+.+. .+.++||+|+|..+++|+. ++....+++++.++|+||
T Consensus 88 ---------------------~-~~~~~~~~~d~~~~--~~~~~~D~v~~~~~l~~~~----~~~~~~~l~~~~~~L~pg 139 (218)
T 3ou2_A 88 ---------------------G-LDNVEFRQQDLFDW--TPDRQWDAVFFAHWLAHVP----DDRFEAFWESVRSAVAPG 139 (218)
T ss_dssp ---------------------C-CTTEEEEECCTTSC--CCSSCEEEEEEESCGGGSC----HHHHHHHHHHHHHHEEEE
T ss_pred ---------------------C-CCCeEEEecccccC--CCCCceeEEEEechhhcCC----HHHHHHHHHHHHHHcCCC
Confidence 1 13588999998763 5668999999999997663 345689999999999999
Q ss_pred cEEEEeeC
Q 047406 217 GIFVLEPQ 224 (290)
Q Consensus 217 G~l~i~~~ 224 (290)
|.+++...
T Consensus 140 G~l~~~~~ 147 (218)
T 3ou2_A 140 GVVEFVDV 147 (218)
T ss_dssp EEEEEEEE
T ss_pred eEEEEEeC
Confidence 99999654
No 54
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.62 E-value=4.7e-15 Score=129.72 Aligned_cols=103 Identities=19% Similarity=0.376 Sum_probs=85.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|+.+..
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~--------------------------------- 87 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEH-GASYVLGLDLSEKMLARARAAGP--------------------------------- 87 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSC---------------------------------
T ss_pred cCCCEEEEEcCcCCHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcc---------------------------------
Confidence 36789999999999999998886 33389999999999999887421
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++.+...|+.+ .+.+.++||+|+|..+++++ ++...++.++.++|+|||.++
T Consensus 88 -------------------~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L~pgG~l~ 141 (243)
T 3bkw_A 88 -------------------DTGITYERADLDK-LHLPQDSFDLAYSSLALHYV------EDVARLFRTVHQALSPGGHFV 141 (243)
T ss_dssp -------------------SSSEEEEECCGGG-CCCCTTCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEEE
T ss_pred -------------------cCCceEEEcChhh-ccCCCCCceEEEEecccccc------chHHHHHHHHHHhcCcCcEEE
Confidence 1247888888876 45567899999999998765 357899999999999999999
Q ss_pred Eee
Q 047406 221 LEP 223 (290)
Q Consensus 221 i~~ 223 (290)
+..
T Consensus 142 ~~~ 144 (243)
T 3bkw_A 142 FST 144 (243)
T ss_dssp EEE
T ss_pred EEe
Confidence 965
No 55
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.62 E-value=4.6e-15 Score=132.76 Aligned_cols=137 Identities=14% Similarity=0.198 Sum_probs=110.1
Q ss_pred hhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhc
Q 047406 51 PRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEK 130 (290)
Q Consensus 51 ~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (290)
.||..+...++++.+|||||||+|.+++.+++..+..+|+++|+++.+++.|+.++..
T Consensus 4 ~RL~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~---------------------- 61 (225)
T 3kr9_A 4 KRLELVASFVSQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEA---------------------- 61 (225)
T ss_dssp HHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----------------------
Confidence 6888898888999999999999999999999987777999999999999999999887
Q ss_pred cCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH
Q 047406 131 GDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
.++.+.+.+...|..+..+. ..+||+|+...+- .+.+..++....
T Consensus 62 --------------------------~gl~~~i~~~~~d~l~~l~~-~~~~D~IviaG~G--------g~~i~~Il~~~~ 106 (225)
T 3kr9_A 62 --------------------------HGLKEKIQVRLANGLAAFEE-TDQVSVITIAGMG--------GRLIARILEEGL 106 (225)
T ss_dssp --------------------------TTCTTTEEEEECSGGGGCCG-GGCCCEEEEEEEC--------HHHHHHHHHHTG
T ss_pred --------------------------cCCCceEEEEECchhhhccc-CcCCCEEEEcCCC--------hHHHHHHHHHHH
Confidence 45566799999999775432 1369998864432 345688999999
Q ss_pred hhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEe
Q 047406 211 KLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVED 268 (290)
Q Consensus 211 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~ 268 (290)
..|+|+|.|++++. ...+.. +.+|.+.||.+++.
T Consensus 107 ~~L~~~~~lVlq~~-----------------------~~~~~v-r~~L~~~Gf~i~~e 140 (225)
T 3kr9_A 107 GKLANVERLILQPN-----------------------NREDDL-RIWLQDHGFQIVAE 140 (225)
T ss_dssp GGCTTCCEEEEEES-----------------------SCHHHH-HHHHHHTTEEEEEE
T ss_pred HHhCCCCEEEEECC-----------------------CCHHHH-HHHHHHCCCEEEEE
Confidence 99999999999754 112333 34788899987754
No 56
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.62 E-value=1.9e-15 Score=133.84 Aligned_cols=181 Identities=17% Similarity=0.121 Sum_probs=110.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++.... .+|+|+|+|+.+++.|++++... ...+.|.++....+.++...
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-- 122 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKE---------PGAFDWSPVVTYVCDLEGNR-- 122 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTC---------TTCCCCHHHHHHHHHHTTTC--
T ss_pred cCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcC---------Cccccchhhhhhhhcccccc--
Confidence 4678999999999999998887643 58999999999999998865420 00111111111111111000
Q ss_pred HHHHHHhhhcCCCccccCcCcce-eEeecccccCCCCCC---CceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIV-SFKQENFVHGRDSPE---KYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~d~~~~~~~~~---~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
+.+... ...+...+ .+...|+.+..+.+. ++||+|+|..++++++. ..++...++.++.++|+||
T Consensus 123 --~~~~~~-------~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~--~~~~~~~~l~~~~~~Lkpg 191 (265)
T 2i62_A 123 --MKGPEK-------EEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACP--DLPAYRTALRNLGSLLKPG 191 (265)
T ss_dssp --SCHHHH-------HHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCS--SHHHHHHHHHHHHTTEEEE
T ss_pred --cchHHH-------HHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcC--ChHHHHHHHHHHHhhCCCC
Confidence 000000 00111236 888888877433344 78999999999975431 1247789999999999999
Q ss_pred cEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 217 GIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 217 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
|+|++.......+. ......+....+.++++.+ ++.++||++++....
T Consensus 192 G~li~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~~ 239 (265)
T 2i62_A 192 GFLVMVDALKSSYY------MIGEQKFSSLPLGWETVRD-AVEEAGYTIEQFEVI 239 (265)
T ss_dssp EEEEEEEESSCCEE------EETTEEEECCCCCHHHHHH-HHHHTTCEEEEEEEE
T ss_pred cEEEEEecCCCceE------EcCCccccccccCHHHHHH-HHHHCCCEEEEEEEe
Confidence 99999753211100 0001111222344555555 899999999887654
No 57
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.62 E-value=1.8e-15 Score=131.39 Aligned_cols=155 Identities=8% Similarity=0.008 Sum_probs=100.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|..+..+++. +.+|+|+|+|+.+++.|++...... ... ..|.
T Consensus 21 ~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~------------~~~---~~~~-------- 75 (203)
T 1pjz_A 21 VPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQP------------HIT---SQGD-------- 75 (203)
T ss_dssp CTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCS------------EEE---EETT--------
T ss_pred CCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCc------------ccc---cccc--------
Confidence 57899999999999999999987 4589999999999999987432100 000 0000
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCC-CceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPE-KYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.......++.+.+.|+.+ ++.+. ++||+|++..++++++ .+....++.++.++|+|||++
T Consensus 76 --------------~~~~~~~~v~~~~~d~~~-l~~~~~~~fD~v~~~~~l~~l~----~~~~~~~l~~~~r~LkpgG~~ 136 (203)
T 1pjz_A 76 --------------FKVYAAPGIEIWCGDFFA-LTARDIGHCAAFYDRAAMIALP----ADMRERYVQHLEALMPQACSG 136 (203)
T ss_dssp --------------EEEEECSSSEEEEECCSS-STHHHHHSEEEEEEESCGGGSC----HHHHHHHHHHHHHHSCSEEEE
T ss_pred --------------cccccCCccEEEECcccc-CCcccCCCEEEEEECcchhhCC----HHHHHHHHHHHHHHcCCCcEE
Confidence 000012358899999876 34333 6899999998886653 356678999999999999985
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++....+. .. . ..-....+.++++.+ ++.+ ||+++.....
T Consensus 137 ~l~~~~~~---~~-~------~~~~~~~~~~~el~~-~~~~-gf~i~~~~~~ 176 (203)
T 1pjz_A 137 LLITLEYD---QA-L------LEGPPFSVPQTWLHR-VMSG-NWEVTKVGGQ 176 (203)
T ss_dssp EEEEESSC---SS-S------SSSCCCCCCHHHHHH-TSCS-SEEEEEEEES
T ss_pred EEEEEecC---cc-c------cCCCCCCCCHHHHHH-HhcC-CcEEEEeccc
Confidence 54332221 00 0 000111244555555 6776 9998766544
No 58
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.62 E-value=3e-15 Score=135.08 Aligned_cols=144 Identities=22% Similarity=0.300 Sum_probs=102.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..++. +..+|+|+|+|+.+++.++...
T Consensus 56 ~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~---------------------------------- 99 (279)
T 3ccf_A 56 QPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNY---------------------------------- 99 (279)
T ss_dssp CTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHC----------------------------------
T ss_pred CCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhC----------------------------------
Confidence 4778999999999999999888 4569999999999999987632
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++.+...|+.+ ++. +++||+|+|..+++|+ .+...++.++.++|+|||.++
T Consensus 100 --------------------~~~~~~~~d~~~-~~~-~~~fD~v~~~~~l~~~------~d~~~~l~~~~~~LkpgG~l~ 151 (279)
T 3ccf_A 100 --------------------PHLHFDVADARN-FRV-DKPLDAVFSNAMLHWV------KEPEAAIASIHQALKSGGRFV 151 (279)
T ss_dssp --------------------TTSCEEECCTTT-CCC-SSCEEEEEEESCGGGC------SCHHHHHHHHHHHEEEEEEEE
T ss_pred --------------------CCCEEEECChhh-CCc-CCCcCEEEEcchhhhC------cCHHHHHHHHHHhcCCCcEEE
Confidence 247788888866 444 5789999999999876 357799999999999999999
Q ss_pred EeeCCCchhhhhh-hhhhhhhc-------ccccccc-CchhHHHHHHHHcCCeeeEec
Q 047406 221 LEPQPWVSYEKNR-RVSETTAT-------NFQNIKL-YPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 221 i~~~~~~~~~~~~-~~~~~~~~-------~~~~~~~-~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
+............ .+...... ......+ .++++.+ +++++||++++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 152 AEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVN-ILEKQGFDVTYAA 208 (279)
T ss_dssp EEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHH-HHHHHTEEEEEEE
T ss_pred EEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHH-HHHHcCCEEEEEE
Confidence 9765432211111 11111100 0111123 3445544 8999999987654
No 59
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.62 E-value=4.5e-15 Score=138.32 Aligned_cols=154 Identities=12% Similarity=0.114 Sum_probs=111.8
Q ss_pred cC-CCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FE-GKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~-~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.+ +.+|||||||+|.++..+++.+|..+++++|+ +.+++.++.++..
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~------------------------------- 224 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHA------------------------------- 224 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHH-------------------------------
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHh-------------------------------
Confidence 45 78999999999999999999998889999999 8899999987665
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+...|+.+..+.+.+.||+|+|.+++|++ +++....+++++.++|+|||.+
T Consensus 225 -----------------~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vlh~~----~~~~~~~~l~~~~~~L~pgG~l 283 (352)
T 3mcz_A 225 -----------------HDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCLHYF----DAREAREVIGHAAGLVKPGGAL 283 (352)
T ss_dssp -----------------TTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCGGGS----CHHHHHHHHHHHHHTEEEEEEE
T ss_pred -----------------cCCCCceEEEeCCcccCcccCCCCccEEEEecccccC----CHHHHHHHHHHHHHHcCCCCEE
Confidence 3344569999999977421134669999999999744 4567899999999999999999
Q ss_pred EEeeCCCchhhhh---hhhhhh-hhccc-cccccCchhHHHHHHHHcCCeeeEe
Q 047406 220 VLEPQPWVSYEKN---RRVSET-TATNF-QNIKLYPKEFQEILLDKIGFRTVED 268 (290)
Q Consensus 220 ~i~~~~~~~~~~~---~~~~~~-~~~~~-~~~~~~~~~~~~~ll~~~Gf~~v~~ 268 (290)
++....+...... ...... ..... ....++.+++.+ +++++||++++.
T Consensus 284 ~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~-ll~~aGf~~~~~ 336 (352)
T 3mcz_A 284 LILTMTMNDDRVTPALSADFSLHMMVNTNHGELHPTPWIAG-VVRDAGLAVGER 336 (352)
T ss_dssp EEEEECCCTTSSSSHHHHHHHHHHHHHSTTCCCCCHHHHHH-HHHHTTCEEEEE
T ss_pred EEEEeccCCCCCCCchHHHhhHHHHhhCCCCCcCCHHHHHH-HHHHCCCceeee
Confidence 9965332211100 000111 11111 222345566666 899999999985
No 60
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.61 E-value=3.7e-15 Score=128.40 Aligned_cols=146 Identities=21% Similarity=0.223 Sum_probs=99.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+.+
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~----------------------------------- 93 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAA----------------------------------- 93 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHT-----------------------------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHh-----------------------------------
Confidence 46799999999999999999887 45899999999999998773
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccC--CCC-CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHG--RDS-PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~-~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
..+.+...|+.+. .+. +..+||+|+|..+++ . .+...++.++.++|+|||
T Consensus 94 --------------------~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~------~~~~~~l~~~~~~L~pgG 146 (227)
T 3e8s_A 94 --------------------GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-H------QDIIELLSAMRTLLVPGG 146 (227)
T ss_dssp --------------------CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-S------SCCHHHHHHHHHTEEEEE
T ss_pred --------------------cccccchhhHHhhcccccccCCCccEEEECchhh-h------hhHHHHHHHHHHHhCCCe
Confidence 1244555555442 122 345699999999985 2 456799999999999999
Q ss_pred EEEEeeCCCchhhhhhhhhhhhhccc---------ccccc-CchhHHHHHHHHcCCeeeEeccC
Q 047406 218 IFVLEPQPWVSYEKNRRVSETTATNF---------QNIKL-YPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++++....-...........+....+ ....+ ..+++.+ +++++||+++++...
T Consensus 147 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~~ 209 (227)
T 3e8s_A 147 ALVIQTLHPWSVADGDYQDGWREESFAGFAGDWQPMPWYFRTLASWLN-ALDMAGLRLVSLQEP 209 (227)
T ss_dssp EEEEEECCTTTTCTTCCSCEEEEECCTTSSSCCCCEEEEECCHHHHHH-HHHHTTEEEEEEECC
T ss_pred EEEEEecCccccCccccccccchhhhhccccCcccceEEEecHHHHHH-HHHHcCCeEEEEecC
Confidence 99997643221111100000000011 11123 4456655 899999999988764
No 61
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.60 E-value=1.2e-14 Score=136.29 Aligned_cols=154 Identities=17% Similarity=0.135 Sum_probs=110.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.++..+++++|+ +.+++.|+.++..
T Consensus 181 ~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~-------------------------------- 227 (374)
T 1qzz_A 181 SAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFAD-------------------------------- 227 (374)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHh--------------------------------
Confidence 5678999999999999999999988789999999 9999999988765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+.. + ..||+|+|.+++|++ .++....++.++.++|+|||+++
T Consensus 228 ----------------~~~~~~v~~~~~d~~~~~--~-~~~D~v~~~~vl~~~----~~~~~~~~l~~~~~~L~pgG~l~ 284 (374)
T 1qzz_A 228 ----------------AGLADRVTVAEGDFFKPL--P-VTADVVLLSFVLLNW----SDEDALTILRGCVRALEPGGRLL 284 (374)
T ss_dssp ----------------TTCTTTEEEEECCTTSCC--S-CCEEEEEEESCGGGS----CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred ----------------cCCCCceEEEeCCCCCcC--C-CCCCEEEEeccccCC----CHHHHHHHHHHHHHhcCCCcEEE
Confidence 344456999999987632 3 249999999999643 45666799999999999999998
Q ss_pred EeeC--CCchhh--hhhhhhhhhh-ccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQ--PWVSYE--KNRRVSETTA-TNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~--~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+... ...... .......... .......+..+++.+ +++++||+++++...
T Consensus 285 i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-ll~~aGf~~~~~~~~ 339 (374)
T 1qzz_A 285 VLDRADVEGDGADRFFSTLLDLRMLTFMGGRVRTRDEVVD-LAGSAGLALASERTS 339 (374)
T ss_dssp EEECCH-------HHHHHHHHHHHHHHHSCCCCCHHHHHH-HHHTTTEEEEEEEEE
T ss_pred EEechhhcCCCCCcchhhhcchHHHHhCCCcCCCHHHHHH-HHHHCCCceEEEEEC
Confidence 8654 211100 0000111100 011122245566665 899999999988765
No 62
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.60 E-value=8.6e-15 Score=131.40 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=112.7
Q ss_pred CchhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhh
Q 047406 49 EDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVI 128 (290)
Q Consensus 49 ~~~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (290)
-..|+..+...+.++.+|||||||+|.+++.+++..+..+|+++|+++.+++.|+.++..
T Consensus 8 Ls~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~-------------------- 67 (230)
T 3lec_A 8 LSKRLQKVANYVPKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSE-------------------- 67 (230)
T ss_dssp CCHHHHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHH--------------------
T ss_pred HHHHHHHHHHhCCCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------------------
Confidence 348899999999999999999999999999999987677899999999999999999887
Q ss_pred hccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHH
Q 047406 129 EKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMR 208 (290)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~ 208 (290)
.++.+.+.+..+|..+.. .+..+||+|+...+. .+.+..++..
T Consensus 68 ----------------------------~gl~~~I~~~~gD~l~~~-~~~~~~D~IviaGmG--------g~lI~~IL~~ 110 (230)
T 3lec_A 68 ----------------------------HGLTSKIDVRLANGLSAF-EEADNIDTITICGMG--------GRLIADILNN 110 (230)
T ss_dssp ----------------------------TTCTTTEEEEECSGGGGC-CGGGCCCEEEEEEEC--------HHHHHHHHHH
T ss_pred ----------------------------cCCCCcEEEEECchhhcc-ccccccCEEEEeCCc--------hHHHHHHHHH
Confidence 556667999999998753 223379998864443 3557889999
Q ss_pred HHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEec
Q 047406 209 IWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 209 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
....|+++|.|++++. ...+. .+.+|.+.||.+++..
T Consensus 111 ~~~~l~~~~~lIlqp~-----------------------~~~~~-lr~~L~~~Gf~i~~E~ 147 (230)
T 3lec_A 111 DIDKLQHVKTLVLQPN-----------------------NREDD-LRKWLAANDFEIVAED 147 (230)
T ss_dssp TGGGGTTCCEEEEEES-----------------------SCHHH-HHHHHHHTTEEEEEEE
T ss_pred HHHHhCcCCEEEEECC-----------------------CChHH-HHHHHHHCCCEEEEEE
Confidence 9999999999999864 11233 3447888999987643
No 63
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.60 E-value=5.2e-15 Score=130.92 Aligned_cols=105 Identities=13% Similarity=0.211 Sum_probs=87.7
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
.+.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++.++ .
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~-~------------------------------ 82 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKI-A------------------------------ 82 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHT-T------------------------------
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHh-h------------------------------
Confidence 3467889999999999999999886 458999999999999998754 1
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
....++.+...|+.+ ++.++++||+|+|..+++|+ ++...++.++.++|+|||.
T Consensus 83 -------------------~~~~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 83 -------------------GVDRKVQVVQADARA-IPLPDESVHGVIVVHLWHLV------PDWPKVLAEAIRVLKPGGA 136 (263)
T ss_dssp -------------------TSCTTEEEEESCTTS-CCSCTTCEEEEEEESCGGGC------TTHHHHHHHHHHHEEEEEE
T ss_pred -------------------ccCCceEEEEccccc-CCCCCCCeeEEEECCchhhc------CCHHHHHHHHHHHCCCCcE
Confidence 112358899999865 56667899999999999876 3578899999999999999
Q ss_pred EEEe
Q 047406 219 FVLE 222 (290)
Q Consensus 219 l~i~ 222 (290)
+++.
T Consensus 137 l~~~ 140 (263)
T 2yqz_A 137 LLEG 140 (263)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9996
No 64
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.60 E-value=8.9e-15 Score=125.78 Aligned_cols=137 Identities=16% Similarity=0.287 Sum_probs=104.5
Q ss_pred HHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCC
Q 047406 54 KVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDG 133 (290)
Q Consensus 54 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (290)
+.+.....++.+|||+|||+|.++..+++ .+..+|+|+|+|+.+++.|+.++..
T Consensus 52 ~~l~~~~~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~------------------------- 105 (205)
T 3grz_A 52 LGIERAMVKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAAL------------------------- 105 (205)
T ss_dssp HHHHHHCSSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHH-------------------------
T ss_pred HHHHHhccCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHH-------------------------
Confidence 34444456789999999999999999876 4556999999999999999998765
Q ss_pred cchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 134 LEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
.++.. +.+...|+.+. ..++||+|++...++ .+..++.++.++|
T Consensus 106 -----------------------~~~~~-v~~~~~d~~~~---~~~~fD~i~~~~~~~---------~~~~~l~~~~~~L 149 (205)
T 3grz_A 106 -----------------------NGIYD-IALQKTSLLAD---VDGKFDLIVANILAE---------ILLDLIPQLDSHL 149 (205)
T ss_dssp -----------------------TTCCC-CEEEESSTTTT---CCSCEEEEEEESCHH---------HHHHHGGGSGGGE
T ss_pred -----------------------cCCCc-eEEEecccccc---CCCCceEEEECCcHH---------HHHHHHHHHHHhc
Confidence 23333 88999998663 357899999987764 3478899999999
Q ss_pred CCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccCCCC
Q 047406 214 RPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGSGGL 274 (290)
Q Consensus 214 kpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~~~~ 274 (290)
+|||++++..... ...+.+. .+++++||++++....+++
T Consensus 150 ~~gG~l~~~~~~~---------------------~~~~~~~-~~~~~~Gf~~~~~~~~~~w 188 (205)
T 3grz_A 150 NEDGQVIFSGIDY---------------------LQLPKIE-QALAENSFQIDLKMRAGRW 188 (205)
T ss_dssp EEEEEEEEEEEEG---------------------GGHHHHH-HHHHHTTEEEEEEEEETTE
T ss_pred CCCCEEEEEecCc---------------------ccHHHHH-HHHHHcCCceEEeeccCCE
Confidence 9999999963210 0123333 3789999999988776443
No 65
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.59 E-value=2.4e-14 Score=126.49 Aligned_cols=108 Identities=25% Similarity=0.524 Sum_probs=85.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+.++..
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~-------------------------------- 85 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKE-------------------------------- 85 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 45689999999999999999886 45899999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchh-hhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSV-TKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~v-l~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.+. ++.+.+.|+.+ .+. .++||+|+|... ++++ ..++...++.++.++|+|||.+
T Consensus 86 ----------------~~~--~v~~~~~d~~~-~~~-~~~fD~v~~~~~~~~~~----~~~~~~~~l~~~~~~L~pgG~l 141 (252)
T 1wzn_A 86 ----------------RNL--KIEFLQGDVLE-IAF-KNEFDAVTMFFSTIMYF----DEEDLRKLFSKVAEALKPGGVF 141 (252)
T ss_dssp ----------------TTC--CCEEEESCGGG-CCC-CSCEEEEEECSSGGGGS----CHHHHHHHHHHHHHHEEEEEEE
T ss_pred ----------------cCC--ceEEEECChhh-ccc-CCCccEEEEcCCchhcC----CHHHHHHHHHHHHHHcCCCeEE
Confidence 122 47888999876 333 368999999743 3222 3467889999999999999999
Q ss_pred EEeeCCC
Q 047406 220 VLEPQPW 226 (290)
Q Consensus 220 ~i~~~~~ 226 (290)
++..++|
T Consensus 142 i~~~~~~ 148 (252)
T 1wzn_A 142 ITDFPCW 148 (252)
T ss_dssp EEEEEC-
T ss_pred EEeccch
Confidence 9976543
No 66
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.59 E-value=4.4e-15 Score=133.03 Aligned_cols=151 Identities=17% Similarity=0.099 Sum_probs=104.0
Q ss_pred hHHhhhhc--cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhc
Q 047406 53 FKVLKKEW--FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEK 130 (290)
Q Consensus 53 l~~l~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (290)
.+.+...+ .++.+|||||||+|.++..+++ +..+|+|+|+|+.+++.++..
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~------------------------- 75 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVH------------------------- 75 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCC-------------------------
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhc-------------------------
Confidence 34444444 5789999999999999999987 456999999999887766441
Q ss_pred cCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH
Q 047406 131 GDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
. ++.+...|+.+ ++.+.++||+|+|..+++|+ ++...++.++.
T Consensus 76 ----------------------------~--~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~ 118 (261)
T 3ege_A 76 ----------------------------P--QVEWFTGYAEN-LALPDKSVDGVISILAIHHF------SHLEKSFQEMQ 118 (261)
T ss_dssp ----------------------------T--TEEEECCCTTS-CCSCTTCBSEEEEESCGGGC------SSHHHHHHHHH
T ss_pred ----------------------------c--CCEEEECchhh-CCCCCCCEeEEEEcchHhhc------cCHHHHHHHHH
Confidence 1 58899999866 56677899999999999765 46789999999
Q ss_pred hhcCCCcEEEEeeCCCchhh---hhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 211 KLLRPGGIFVLEPQPWVSYE---KNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 211 ~~LkpgG~l~i~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++|+ ||.+++...+..... ........ .. ..+..+.+.+... +++++||+.++....
T Consensus 119 ~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~-~l~~aGF~~v~~~~~ 178 (261)
T 3ege_A 119 RIIR-DGTIVLLTFDIRLAQRIWLYDYFPFL-WE-DALRFLPLDEQIN-LLQENTKRRVEAIPF 178 (261)
T ss_dssp HHBC-SSCEEEEEECGGGCCCCGGGGTCHHH-HH-HHHTSCCHHHHHH-HHHHHHCSEEEEEEC
T ss_pred HHhC-CcEEEEEEcCCchhHHHHHHHHHHHH-hh-hhhhhCCCHHHHH-HHHHcCCCceeEEEe
Confidence 9999 997766443211100 00000000 00 1112244444455 899999998876543
No 67
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.59 E-value=1.2e-14 Score=134.66 Aligned_cols=117 Identities=12% Similarity=0.101 Sum_probs=82.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||||||+|..+..++.. +..+|+|+|+|+.+++.|+........
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~------------------------------ 96 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNS------------------------------ 96 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC------------------------------
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccc------------------------------
Confidence 4789999999999876665553 345899999999999999987644100
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccC-----C--CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHG-----R--DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-----~--~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
. ...-...+.|.+.|+... + +.+.++||+|+|.+++||+ +..++...++.++.++|+
T Consensus 97 -----------~--~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~---~~~~~~~~~l~~~~r~Lk 160 (302)
T 2vdw_A 97 -----------G--IKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYS---FHPRHYATVMNNLSELTA 160 (302)
T ss_dssp -----------------CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGT---CSTTTHHHHHHHHHHHEE
T ss_pred -----------c--ccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHh---CCHHHHHHHHHHHHHHcC
Confidence 0 000000245656655221 1 2345789999999998764 233456899999999999
Q ss_pred CCcEEEEeeCC
Q 047406 215 PGGIFVLEPQP 225 (290)
Q Consensus 215 pgG~l~i~~~~ 225 (290)
|||+|++..++
T Consensus 161 pGG~~i~~~~~ 171 (302)
T 2vdw_A 161 SGGKVLITTMD 171 (302)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCEEEEEeCC
Confidence 99999997654
No 68
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.59 E-value=1.4e-14 Score=131.06 Aligned_cols=138 Identities=10% Similarity=0.076 Sum_probs=110.9
Q ss_pred CchhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhh
Q 047406 49 EDPRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVI 128 (290)
Q Consensus 49 ~~~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (290)
-..|+..+...+.++.+|||||||+|.+++.+++..+..+|+++|+++.+++.|+.++..
T Consensus 8 Ls~RL~~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~-------------------- 67 (244)
T 3gnl_A 8 LSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRS-------------------- 67 (244)
T ss_dssp CCHHHHHHHTTCCSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHH--------------------
T ss_pred hhHHHHHHHHhCCCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------------------
Confidence 358899999999999999999999999999999987677899999999999999999876
Q ss_pred hccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHH
Q 047406 129 EKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMR 208 (290)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~ 208 (290)
.++.+.+.+..+|..+.. .+..+||+|++..+. .+.+..++..
T Consensus 68 ----------------------------~gl~~~I~v~~gD~l~~~-~~~~~~D~IviagmG--------g~lI~~IL~~ 110 (244)
T 3gnl_A 68 ----------------------------SGLTEQIDVRKGNGLAVI-EKKDAIDTIVIAGMG--------GTLIRTILEE 110 (244)
T ss_dssp ----------------------------TTCTTTEEEEECSGGGGC-CGGGCCCEEEEEEEC--------HHHHHHHHHH
T ss_pred ----------------------------cCCCceEEEEecchhhcc-CccccccEEEEeCCc--------hHHHHHHHHH
Confidence 556667999999998753 222369998864442 3567889999
Q ss_pred HHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeE
Q 047406 209 IWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVE 267 (290)
Q Consensus 209 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~ 267 (290)
....|+++|.|++++. ...+. .+.+|.+.||.+++
T Consensus 111 ~~~~L~~~~~lIlq~~-----------------------~~~~~-lr~~L~~~Gf~i~~ 145 (244)
T 3gnl_A 111 GAAKLAGVTKLILQPN-----------------------IAAWQ-LREWSEQNNWLITS 145 (244)
T ss_dssp TGGGGTTCCEEEEEES-----------------------SCHHH-HHHHHHHHTEEEEE
T ss_pred HHHHhCCCCEEEEEcC-----------------------CChHH-HHHHHHHCCCEEEE
Confidence 9999999999999863 11233 34478889998754
No 69
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.58 E-value=1.4e-14 Score=134.07 Aligned_cols=151 Identities=16% Similarity=0.096 Sum_probs=109.9
Q ss_pred CcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQE 143 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (290)
.+|||+|||+|..+..+++.+|..+++++|+ +.+++.|+.++..
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~----------------------------------- 212 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSS----------------------------------- 212 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHH-----------------------------------
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhh-----------------------------------
Confidence 8999999999999999999988889999999 9999999887654
Q ss_pred HHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEEee
Q 047406 144 EKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (290)
.++..++.+...|+.+. .+ ..||+|+|.+++|+ |+++....+++++.++|+|||.+++..
T Consensus 213 -------------~~~~~~v~~~~~d~~~~--~~-~~~D~v~~~~vl~~----~~~~~~~~~l~~~~~~L~pgG~l~i~e 272 (334)
T 2ip2_A 213 -------------LLAGERVSLVGGDMLQE--VP-SNGDIYLLSRIIGD----LDEAASLRLLGNCREAMAGDGRVVVIE 272 (334)
T ss_dssp -------------HHHTTSEEEEESCTTTC--CC-SSCSEEEEESCGGG----CCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred -------------cCCCCcEEEecCCCCCC--CC-CCCCEEEEchhccC----CCHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 22334689999998763 33 67999999999863 445677899999999999999999965
Q ss_pred CCCchhhh--hhhhhhh-hhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 224 QPWVSYEK--NRRVSET-TATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 224 ~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
..+..... ....... ..........+.+++.+ +++++||+++++...
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~-ll~~aGf~~~~~~~~ 322 (334)
T 2ip2_A 273 RTISASEPSPMSVLWDVHLFMACAGRHRTTEEVVD-LLGRGGFAVERIVDL 322 (334)
T ss_dssp CCBCSSSCCHHHHHHHHHHHHHHSCCCCBHHHHHH-HHHHTTEEEEEEEEE
T ss_pred eccCCCCCcchhHHhhhHhHhhCCCcCCCHHHHHH-HHHHCCCceeEEEEC
Confidence 43221100 0000010 00111122345566666 899999999988764
No 70
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.58 E-value=5e-14 Score=121.17 Aligned_cols=106 Identities=16% Similarity=0.131 Sum_probs=87.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||+|||+|.++..+++..+..+|+++|+|+.+++.|++++..
T Consensus 38 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------------------- 86 (204)
T 3e05_A 38 LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKK------------------------------- 86 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH-------------------------------
Confidence 3578899999999999999999987778999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++ .++.+...|+.+..+ ....||+|++...+ .....++.++.++|+|||.+
T Consensus 87 -----------------~~~-~~v~~~~~d~~~~~~-~~~~~D~i~~~~~~---------~~~~~~l~~~~~~LkpgG~l 138 (204)
T 3e05_A 87 -----------------FVA-RNVTLVEAFAPEGLD-DLPDPDRVFIGGSG---------GMLEEIIDAVDRRLKSEGVI 138 (204)
T ss_dssp -----------------HTC-TTEEEEECCTTTTCT-TSCCCSEEEESCCT---------TCHHHHHHHHHHHCCTTCEE
T ss_pred -----------------hCC-CcEEEEeCChhhhhh-cCCCCCEEEECCCC---------cCHHHHHHHHHHhcCCCeEE
Confidence 223 458899999866432 23679999997765 25678999999999999999
Q ss_pred EEeeC
Q 047406 220 VLEPQ 224 (290)
Q Consensus 220 ~i~~~ 224 (290)
++...
T Consensus 139 ~~~~~ 143 (204)
T 3e05_A 139 VLNAV 143 (204)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99754
No 71
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.58 E-value=1.3e-14 Score=132.25 Aligned_cols=114 Identities=22% Similarity=0.332 Sum_probs=92.0
Q ss_pred hHHhhhhc-cCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhc
Q 047406 53 FKVLKKEW-FEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEK 130 (290)
Q Consensus 53 l~~l~~~~-~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (290)
++.+.... .++.+|||||||+|..+..+++.+ +..+|+|+|+|+.+++.|+.++...
T Consensus 26 ~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~--------------------- 84 (299)
T 3g5t_A 26 YKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS--------------------- 84 (299)
T ss_dssp HHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC---------------------
T ss_pred HHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc---------------------
Confidence 34444432 478999999999999999999876 6779999999999999999977651
Q ss_pred cCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCC------CceeEEEEchhhhhhhhcCCchHHHH
Q 047406 131 GDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPE------KYYDAILCLSVTKWIHLNWGDDGLIT 204 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~------~~fD~I~~~~vl~~~~l~~~~~~~~~ 204 (290)
.+...++.+.+.|+.+ ++.+. ++||+|+|..+++|+ +...
T Consensus 85 --------------------------~~~~~~v~~~~~d~~~-~~~~~~~~~~~~~fD~V~~~~~l~~~-------~~~~ 130 (299)
T 3g5t_A 85 --------------------------PDTYKNVSFKISSSDD-FKFLGADSVDKQKIDMITAVECAHWF-------DFEK 130 (299)
T ss_dssp --------------------------C-CCTTEEEEECCTTC-CGGGCTTTTTSSCEEEEEEESCGGGS-------CHHH
T ss_pred --------------------------cCCCCceEEEEcCHHh-CCccccccccCCCeeEEeHhhHHHHh-------CHHH
Confidence 1223468999999876 34444 789999999999766 4678
Q ss_pred HHHHHHhhcCCCcEEEE
Q 047406 205 LFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 205 ~l~~~~~~LkpgG~l~i 221 (290)
++.++.++|+|||.|++
T Consensus 131 ~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 131 FQRSAYANLRKDGTIAI 147 (299)
T ss_dssp HHHHHHHHEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEE
Confidence 99999999999999998
No 72
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.58 E-value=5.3e-14 Score=132.52 Aligned_cols=153 Identities=19% Similarity=0.237 Sum_probs=112.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
....+|+|||||+|..+..+++.+|..+++..|+ |.+++.|+..+.
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~--------------------------------- 223 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFS--------------------------------- 223 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSC---------------------------------
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhh---------------------------------
Confidence 4567999999999999999999999999999998 889988877532
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
....+++++..+|+.+. +...+|+|++.+++| +|+++....+|+++.+.|+|||.++
T Consensus 224 ----------------~~~~~rv~~~~gD~~~~---~~~~~D~~~~~~vlh----~~~d~~~~~iL~~~~~al~pgg~ll 280 (353)
T 4a6d_A 224 ----------------FQEEEQIDFQEGDFFKD---PLPEADLYILARVLH----DWADGKCSHLLERIYHTCKPGGGIL 280 (353)
T ss_dssp ----------------C--CCSEEEEESCTTTS---CCCCCSEEEEESSGG----GSCHHHHHHHHHHHHHHCCTTCEEE
T ss_pred ----------------hcccCceeeecCccccC---CCCCceEEEeeeecc----cCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 12245799999999763 334589999999986 5678888999999999999999999
Q ss_pred EeeCCCchhhhh----hhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKN----RRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+........... ......+.........+.++|.+ +++++||+.+++...
T Consensus 281 i~e~~~~~~~~~~~~~~~~dl~ml~~~~g~ert~~e~~~-ll~~AGf~~v~v~~~ 334 (353)
T 4a6d_A 281 VIESLLDEDRRGPLLTQLYSLNMLVQTEGQERTPTHYHM-LLSSAGFRDFQFKKT 334 (353)
T ss_dssp EEECCCCTTSCCCHHHHHHHHHHHHSSSCCCCCHHHHHH-HHHHHTCEEEEEECC
T ss_pred EEEeeeCCCCCCCHHHHHHHHHHHHhCCCcCCCHHHHHH-HHHHCCCceEEEEEc
Confidence 965432211110 00111111123333455677766 899999999998776
No 73
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.58 E-value=3e-14 Score=123.78 Aligned_cols=113 Identities=12% Similarity=0.109 Sum_probs=88.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||||||+|.++..+++..|..+++|+|+|+.+++.|+.++..
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~--------------------------------- 87 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLE--------------------------------- 87 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHH---------------------------------
Confidence 57899999999999999999998888999999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCC--CCCCceeEEEEchhhhhhhhcCCc--hHHHHHHHHHHhhcCCCc
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--SPEKYYDAILCLSVTKWIHLNWGD--DGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~fD~I~~~~vl~~~~l~~~~--~~~~~~l~~~~~~LkpgG 217 (290)
.++ .++.+.+.|+.+ ++ .+.+.||+|++.....|....... -....++.++.++|+|||
T Consensus 88 ---------------~~~-~~v~~~~~d~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 150 (214)
T 1yzh_A 88 ---------------VGV-PNIKLLWVDGSD-LTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENG 150 (214)
T ss_dssp ---------------HCC-SSEEEEECCSSC-GGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTC
T ss_pred ---------------cCC-CCEEEEeCCHHH-HHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCc
Confidence 223 368899999876 33 456789999998664332100000 023679999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
++++...
T Consensus 151 ~l~~~~~ 157 (214)
T 1yzh_A 151 EIHFKTD 157 (214)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9999754
No 74
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.57 E-value=4.9e-15 Score=123.40 Aligned_cols=133 Identities=15% Similarity=0.193 Sum_probs=99.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++... +++|+|+|+.+++.++.+
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~----------------------------------- 58 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK----------------------------------- 58 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH-----------------------------------
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh-----------------------------------
Confidence 5778999999999999999998763 899999999999998874
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++.+...| .+.+.++||+|+|..+++++ ++...++.++.++|+|||.++
T Consensus 59 -------------------~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~------~~~~~~l~~~~~~L~pgG~l~ 109 (170)
T 3i9f_A 59 -------------------FDSVITLSDP----KEIPDNSVDFILFANSFHDM------DDKQHVISEVKRILKDDGRVI 109 (170)
T ss_dssp -------------------CTTSEEESSG----GGSCTTCEEEEEEESCSTTC------SCHHHHHHHHHHHEEEEEEEE
T ss_pred -------------------CCCcEEEeCC----CCCCCCceEEEEEccchhcc------cCHHHHHHHHHHhcCCCCEEE
Confidence 1247777777 24466899999999999765 357899999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+......... ........+..+++.+ +++ ||++++....
T Consensus 110 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~-~l~--Gf~~~~~~~~ 148 (170)
T 3i9f_A 110 IIDWRKENTG---------IGPPLSIRMDEKDYMG-WFS--NFVVEKRFNP 148 (170)
T ss_dssp EEEECSSCCS---------SSSCGGGCCCHHHHHH-HTT--TEEEEEEECS
T ss_pred EEEcCccccc---------cCchHhhhcCHHHHHH-HHh--CcEEEEccCC
Confidence 9643211000 0001112355566666 666 9999988776
No 75
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.57 E-value=2.9e-15 Score=137.54 Aligned_cols=137 Identities=18% Similarity=0.297 Sum_probs=89.1
Q ss_pred CCCcEEEecCCCCh----hhHHHHhHcC----CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhh---hc
Q 047406 62 EGKDCLDIGCNSGI----ITIQIAQKFN----CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVI---EK 130 (290)
Q Consensus 62 ~~~~vLDiGcG~G~----~~~~la~~~~----~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 130 (290)
++.+|||+|||+|. +++.++..++ ..+|+|+|+|+.+++.|+.+++........+.+.... .|. +.
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~---~f~~~~~~ 181 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQR---YFMRGTGP 181 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHH---HEEECCTT
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHH---HhhccccC
Confidence 35799999999998 5556666544 3589999999999999998653210000000000000 000 00
Q ss_pred cCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-CCceeEEEEchhhhhhhhcCCchHHHHHHHHH
Q 047406 131 GDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-EKYYDAILCLSVTKWIHLNWGDDGLITLFMRI 209 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~ 209 (290)
+.+.... ..++...+.|.+.|+.+. +.+ .++||+|+|.++++|+ +++...+++.++
T Consensus 182 ~~~~~~v------------------~~~lr~~V~F~~~dl~~~-~~~~~~~fDlI~crnvliyf----~~~~~~~vl~~~ 238 (274)
T 1af7_A 182 HEGLVRV------------------RQELANYVEFSSVNLLEK-QYNVPGPFDAIFCRNVMIYF----DKTTQEDILRRF 238 (274)
T ss_dssp SCSEEEE------------------CHHHHTTEEEEECCTTCS-SCCCCCCEEEEEECSSGGGS----CHHHHHHHHHHH
T ss_pred CCCceee------------------chhhcccCeEEecccCCC-CCCcCCCeeEEEECCchHhC----CHHHHHHHHHHH
Confidence 0000000 012234699999999872 333 4789999999999655 356779999999
Q ss_pred HhhcCCCcEEEEeeC
Q 047406 210 WKLLRPGGIFVLEPQ 224 (290)
Q Consensus 210 ~~~LkpgG~l~i~~~ 224 (290)
.+.|+|||+|++.+.
T Consensus 239 ~~~L~pgG~L~lg~s 253 (274)
T 1af7_A 239 VPLLKPDGLLFAGHS 253 (274)
T ss_dssp GGGEEEEEEEEECTT
T ss_pred HHHhCCCcEEEEEec
Confidence 999999999999643
No 76
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.57 E-value=3.2e-14 Score=123.89 Aligned_cols=147 Identities=14% Similarity=0.248 Sum_probs=101.9
Q ss_pred HHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCC
Q 047406 54 KVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDG 133 (290)
Q Consensus 54 ~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (290)
..+... .++.+|||+|||+|.++..++.. +|+|+|+.+++.++.+
T Consensus 40 ~~l~~~-~~~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~---------------------------- 84 (219)
T 1vlm_A 40 QAVKCL-LPEGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR---------------------------- 84 (219)
T ss_dssp HHHHHH-CCSSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------------------------
T ss_pred HHHHHh-CCCCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------------------------
Confidence 334333 44899999999999998887653 9999999999988762
Q ss_pred cchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 134 LEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
.+.+...|+.+ .+.+.+.||+|+|..+++++ ++...++.++.++|
T Consensus 85 ----------------------------~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L 129 (219)
T 1vlm_A 85 ----------------------------GVFVLKGTAEN-LPLKDESFDFALMVTTICFV------DDPERALKEAYRIL 129 (219)
T ss_dssp ----------------------------TCEEEECBTTB-CCSCTTCEEEEEEESCGGGS------SCHHHHHHHHHHHE
T ss_pred ----------------------------CCEEEEccccc-CCCCCCCeeEEEEcchHhhc------cCHHHHHHHHHHHc
Confidence 26677778765 45566789999999999765 35689999999999
Q ss_pred CCCcEEEEeeCCCchhhhhhhhh-hhhhcccccccc-CchhHHHHHHHHcCCeeeEeccC
Q 047406 214 RPGGIFVLEPQPWVSYEKNRRVS-ETTATNFQNIKL-YPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 214 kpgG~l~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+|||.+++...+..+........ ......+.+..+ ..+++.+ +++++||++++....
T Consensus 130 ~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~l~~~Gf~~~~~~~~ 188 (219)
T 1vlm_A 130 KKGGYLIVGIVDRESFLGREYEKNKEKSVFYKNARFFSTEELMD-LMRKAGFEEFKVVQT 188 (219)
T ss_dssp EEEEEEEEEEECSSSHHHHHHHHTTTC-CCSTTCCCCCHHHHHH-HHHHTTCEEEEEEEE
T ss_pred CCCcEEEEEEeCCccHHHHHHHHHhcCcchhcccccCCHHHHHH-HHHHCCCeEEEEecc
Confidence 99999999754432221110000 000111223333 4455544 899999999887654
No 77
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.57 E-value=3.6e-14 Score=120.20 Aligned_cols=143 Identities=16% Similarity=0.202 Sum_probs=103.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.++.++..
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 76 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSI-------------------------------- 76 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 46789999999999999999886 45999999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++ .++.+...|+.+ .+. .++||+|+|..+++|+. .+....++.++.++|+|||.++
T Consensus 77 ----------------~~~-~~~~~~~~d~~~-~~~-~~~~D~v~~~~~l~~~~----~~~~~~~l~~~~~~L~~gG~l~ 133 (199)
T 2xvm_A 77 ----------------ENL-DNLHTRVVDLNN-LTF-DRQYDFILSTVVLMFLE----AKTIPGLIANMQRCTKPGGYNL 133 (199)
T ss_dssp ----------------HTC-TTEEEEECCGGG-CCC-CCCEEEEEEESCGGGSC----GGGHHHHHHHHHHTEEEEEEEE
T ss_pred ----------------CCC-CCcEEEEcchhh-CCC-CCCceEEEEcchhhhCC----HHHHHHHHHHHHHhcCCCeEEE
Confidence 122 248888999876 344 67899999999997653 4578899999999999999987
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+........ . .........+.++++.+ ++.. |++++....
T Consensus 134 ~~~~~~~~~-----~---~~~~~~~~~~~~~~l~~-~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 134 IVAAMDTAD-----Y---PCTVGFPFAFKEGELRR-YYEG--WERVKYNED 173 (199)
T ss_dssp EEEEBCCSS-----S---CCCSCCSCCBCTTHHHH-HTTT--SEEEEEECC
T ss_pred EEEeeccCC-----c---CCCCCCCCccCHHHHHH-HhcC--CeEEEeccc
Confidence 743211000 0 00011122355666666 5654 998877543
No 78
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.57 E-value=7.8e-14 Score=119.21 Aligned_cols=151 Identities=17% Similarity=0.183 Sum_probs=106.2
Q ss_pred hhhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhc
Q 047406 51 PRFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEK 130 (290)
Q Consensus 51 ~~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (290)
+.+..+...+.++ +|||+|||+|.++..+++. ..+++|+|+|+.+++.|+.+...
T Consensus 19 ~~l~~~~~~~~~~-~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~---------------------- 73 (202)
T 2kw5_A 19 DFLVSVANQIPQG-KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQE---------------------- 73 (202)
T ss_dssp SSHHHHHHHSCSS-EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHH----------------------
T ss_pred HHHHHHHHhCCCC-CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHh----------------------
Confidence 4455555666777 9999999999999998886 45999999999999999987654
Q ss_pred cCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH
Q 047406 131 GDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
.+. ++.+...|+.+ .+.+.+.||+|+|... |+ ..++...++.++.
T Consensus 74 --------------------------~~~--~~~~~~~d~~~-~~~~~~~fD~v~~~~~----~~--~~~~~~~~l~~~~ 118 (202)
T 2kw5_A 74 --------------------------KGV--KITTVQSNLAD-FDIVADAWEGIVSIFC----HL--PSSLRQQLYPKVY 118 (202)
T ss_dssp --------------------------HTC--CEEEECCBTTT-BSCCTTTCSEEEEECC----CC--CHHHHHHHHHHHH
T ss_pred --------------------------cCC--ceEEEEcChhh-cCCCcCCccEEEEEhh----cC--CHHHHHHHHHHHH
Confidence 112 47888888866 3555688999999532 11 3467889999999
Q ss_pred hhcCCCcEEEEeeCCCchhhhhhhhhhhhhcccc-ccccCchhHHHHHHHHcCCeeeEecc
Q 047406 211 KLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQ-NIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 211 ~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
++|+|||.+++.......... ....... ...+.++++.+ +++ ||++++...
T Consensus 119 ~~L~pgG~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~-~l~--Gf~v~~~~~ 170 (202)
T 2kw5_A 119 QGLKPGGVFILEGFAPEQLQY------NTGGPKDLDLLPKLETLQS-ELP--SLNWLIANN 170 (202)
T ss_dssp TTCCSSEEEEEEEECTTTGGG------TSCCSSSGGGCCCHHHHHH-HCS--SSCEEEEEE
T ss_pred HhcCCCcEEEEEEeccccccC------CCCCCCcceeecCHHHHHH-Hhc--CceEEEEEE
Confidence 999999999997543221110 0000111 12355566655 666 999887644
No 79
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.57 E-value=2.2e-14 Score=119.65 Aligned_cols=105 Identities=20% Similarity=0.167 Sum_probs=84.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++..++..+|+++|+|+.+++.|+.++..
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 71 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAIN-------------------------------- 71 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHT--------------------------------
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHH--------------------------------
Confidence 577899999999999999999988778999999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++ +...|..+.++...++||+|++..++++ ..++.++.++|+|||.++
T Consensus 72 ----------------~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~----------~~~l~~~~~~L~~gG~l~ 124 (178)
T 3hm2_A 72 ----------------LGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA----------PGVFAAAWKRLPVGGRLV 124 (178)
T ss_dssp ----------------TTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC----------TTHHHHHHHTCCTTCEEE
T ss_pred ----------------hCCCCCE-EEecchHhhhhccCCCCCEEEECCcccH----------HHHHHHHHHhcCCCCEEE
Confidence 3334356 7777775544443378999999888742 567899999999999999
Q ss_pred EeeC
Q 047406 221 LEPQ 224 (290)
Q Consensus 221 i~~~ 224 (290)
+...
T Consensus 125 ~~~~ 128 (178)
T 3hm2_A 125 ANAV 128 (178)
T ss_dssp EEEC
T ss_pred EEee
Confidence 9653
No 80
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.57 E-value=2.8e-14 Score=123.13 Aligned_cols=146 Identities=15% Similarity=0.172 Sum_probs=102.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. + .+++|+|+|+.+++.++.+.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~~---------------------------------- 74 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEKL---------------------------------- 74 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTTS----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHhC----------------------------------
Confidence 47789999999999999999887 4 69999999999998886521
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccC-CCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHG-RDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
..+...|+.+. .+.++++||+|+|..+++|+ .+...++.++.++|+|||.+
T Consensus 75 ----------------------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L~~gG~l 126 (230)
T 3cc8_A 75 ----------------------DHVVLGDIETMDMPYEEEQFDCVIFGDVLEHL------FDPWAVIEKVKPYIKQNGVI 126 (230)
T ss_dssp ----------------------SEEEESCTTTCCCCSCTTCEEEEEEESCGGGS------SCHHHHHHHTGGGEEEEEEE
T ss_pred ----------------------CcEEEcchhhcCCCCCCCccCEEEECChhhhc------CCHHHHHHHHHHHcCCCCEE
Confidence 24666776542 34456789999999999765 34579999999999999999
Q ss_pred EEeeCCCchhhhhhhh-hhhhhc------cccccc-cCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRRV-SETTAT------NFQNIK-LYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~-~~~~~~------~~~~~~-~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++..+........... ...... ...+.. +..+++.+ +++++||++++....
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gf~~~~~~~~ 185 (230)
T 3cc8_A 127 LASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLR-MFLKAGYSISKVDRV 185 (230)
T ss_dssp EEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHH-HHHHTTEEEEEEEEE
T ss_pred EEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHH-HHHHcCCeEEEEEec
Confidence 9977654332211111 000000 011223 34455554 899999999887654
No 81
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.56 E-value=7.1e-14 Score=131.01 Aligned_cols=154 Identities=13% Similarity=0.130 Sum_probs=110.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.+|..+++++|+ +.+++.|++++..
T Consensus 189 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~-------------------------------- 235 (359)
T 1x19_A 189 DGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAE-------------------------------- 235 (359)
T ss_dssp TTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHh--------------------------------
Confidence 5678999999999999999999988889999999 9999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+. +.+ .+|+|++..++++ |.++....+++++.++|+|||.++
T Consensus 236 ----------------~~~~~~v~~~~~d~~~~-~~~--~~D~v~~~~vlh~----~~d~~~~~~l~~~~~~L~pgG~l~ 292 (359)
T 1x19_A 236 ----------------KGVADRMRGIAVDIYKE-SYP--EADAVLFCRILYS----ANEQLSTIMCKKAFDAMRSGGRLL 292 (359)
T ss_dssp ----------------TTCTTTEEEEECCTTTS-CCC--CCSEEEEESCGGG----SCHHHHHHHHHHHHTTCCTTCEEE
T ss_pred ----------------cCCCCCEEEEeCccccC-CCC--CCCEEEEechhcc----CCHHHHHHHHHHHHHhcCCCCEEE
Confidence 33444699999999763 333 3499999999864 345678999999999999999998
Q ss_pred EeeCCCchhhh--hhhhhhhhhccccccc----cCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEK--NRRVSETTATNFQNIK----LYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+.......... .......+........ +..+++.+ +++++||+++++...
T Consensus 293 i~e~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~~~-ll~~aGf~~v~~~~~ 348 (359)
T 1x19_A 293 ILDMVIDDPENPNFDYLSHYILGAGMPFSVLGFKEQARYKE-ILESLGYKDVTMVRK 348 (359)
T ss_dssp EEEECCCCTTSCCHHHHHHHGGGGGSSCCCCCCCCGGGHHH-HHHHHTCEEEEEEEE
T ss_pred EEecccCCCCCchHHHHHHHHHhcCCCCcccCCCCHHHHHH-HHHHCCCceEEEEec
Confidence 85422211100 0000001000000111 55666766 899999999988765
No 82
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.56 E-value=5.7e-14 Score=131.26 Aligned_cols=154 Identities=19% Similarity=0.207 Sum_probs=111.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.++..+++++|+ +.+++.|+.++..
T Consensus 182 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~-------------------------------- 228 (360)
T 1tw3_A 182 TNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKD-------------------------------- 228 (360)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHH--------------------------------
T ss_pred ccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHh--------------------------------
Confidence 4678999999999999999999988889999999 9999999987765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+.. + ..||+|++.+++|+ |+++....+++++.++|+|||.++
T Consensus 229 ----------------~~~~~~v~~~~~d~~~~~--~-~~~D~v~~~~vl~~----~~~~~~~~~l~~~~~~L~pgG~l~ 285 (360)
T 1tw3_A 229 ----------------EGLSDRVDVVEGDFFEPL--P-RKADAIILSFVLLN----WPDHDAVRILTRCAEALEPGGRIL 285 (360)
T ss_dssp ----------------TTCTTTEEEEECCTTSCC--S-SCEEEEEEESCGGG----SCHHHHHHHHHHHHHTEEEEEEEE
T ss_pred ----------------cCCCCceEEEeCCCCCCC--C-CCccEEEEcccccC----CCHHHHHHHHHHHHHhcCCCcEEE
Confidence 334456999999987632 3 34999999999864 345666899999999999999999
Q ss_pred EeeCC-Cchhhh--hhhhhhhhh-ccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQP-WVSYEK--NRRVSETTA-TNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~-~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+.... +..... ......... .......+..+++.+ +++++||+++++...
T Consensus 286 i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~-ll~~aGf~~~~~~~~ 339 (360)
T 1tw3_A 286 IHERDDLHENSFNEQFTELDLRMLVFLGGALRTREKWDG-LAASAGLVVEEVRQL 339 (360)
T ss_dssp EEECCBCGGGCCSHHHHHHHHHHHHHHSCCCCBHHHHHH-HHHHTTEEEEEEEEE
T ss_pred EEEEeccCCCCCcchhhhccHHHhhhcCCcCCCHHHHHH-HHHHCCCeEEEEEeC
Confidence 87654 221100 000001000 011122345566655 899999999988765
No 83
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.56 E-value=2.8e-14 Score=126.46 Aligned_cols=129 Identities=15% Similarity=0.085 Sum_probs=97.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++...+..+|+|+|+|+.+++.|+.++..
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 116 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEA-------------------------------- 116 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH--------------------------------
Confidence 467899999999999999999877778999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC---CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP---EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
.++. ++.+.+.|+.+ ++.. .++||+|+|..+ .+...++..+.++|+|||
T Consensus 117 ----------------~~~~-~v~~~~~d~~~-~~~~~~~~~~fD~V~~~~~----------~~~~~~l~~~~~~LkpgG 168 (240)
T 1xdz_A 117 ----------------LQLE-NTTFCHDRAET-FGQRKDVRESYDIVTARAV----------ARLSVLSELCLPLVKKNG 168 (240)
T ss_dssp ----------------HTCS-SEEEEESCHHH-HTTCTTTTTCEEEEEEECC----------SCHHHHHHHHGGGEEEEE
T ss_pred ----------------cCCC-CEEEEeccHHH-hcccccccCCccEEEEecc----------CCHHHHHHHHHHhcCCCC
Confidence 2332 48899998866 2322 478999999763 346789999999999999
Q ss_pred EEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEec
Q 047406 218 IFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
++++..+..... ...++.+ .+++.||++++..
T Consensus 169 ~l~~~~g~~~~~-------------------~~~~~~~-~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 169 LFVALKAASAEE-------------------ELNAGKK-AITTLGGELENIH 200 (240)
T ss_dssp EEEEEECC-CHH-------------------HHHHHHH-HHHHTTEEEEEEE
T ss_pred EEEEEeCCCchH-------------------HHHHHHH-HHHHcCCeEeEEE
Confidence 999964421110 0022333 6788999887664
No 84
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.56 E-value=5.7e-15 Score=133.95 Aligned_cols=107 Identities=21% Similarity=0.381 Sum_probs=88.4
Q ss_pred hhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhcc
Q 047406 52 RFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKG 131 (290)
Q Consensus 52 ~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (290)
.++.+......+.+|||||||+|..+..+++.+ .+|+|+|+|+.+++.|+.
T Consensus 29 l~~~l~~~~~~~~~vLDvGcGtG~~~~~l~~~~--~~v~gvD~s~~ml~~a~~--------------------------- 79 (257)
T 4hg2_A 29 LFRWLGEVAPARGDALDCGCGSGQASLGLAEFF--ERVHAVDPGEAQIRQALR--------------------------- 79 (257)
T ss_dssp HHHHHHHHSSCSSEEEEESCTTTTTHHHHHTTC--SEEEEEESCHHHHHTCCC---------------------------
T ss_pred HHHHHHHhcCCCCCEEEEcCCCCHHHHHHHHhC--CEEEEEeCcHHhhhhhhh---------------------------
Confidence 355666666677899999999999999999874 489999999999876643
Q ss_pred CCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHh
Q 047406 132 DGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWK 211 (290)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~ 211 (290)
..++.+.+.|+.+ ++.++++||+|+|..++||+. ...++.++.+
T Consensus 80 ----------------------------~~~v~~~~~~~e~-~~~~~~sfD~v~~~~~~h~~~-------~~~~~~e~~r 123 (257)
T 4hg2_A 80 ----------------------------HPRVTYAVAPAED-TGLPPASVDVAIAAQAMHWFD-------LDRFWAELRR 123 (257)
T ss_dssp ----------------------------CTTEEEEECCTTC-CCCCSSCEEEEEECSCCTTCC-------HHHHHHHHHH
T ss_pred ----------------------------cCCceeehhhhhh-hcccCCcccEEEEeeehhHhh-------HHHHHHHHHH
Confidence 1258899999866 677889999999999998873 4578999999
Q ss_pred hcCCCcEEEEee
Q 047406 212 LLRPGGIFVLEP 223 (290)
Q Consensus 212 ~LkpgG~l~i~~ 223 (290)
+|+|||+|++..
T Consensus 124 vLkpgG~l~~~~ 135 (257)
T 4hg2_A 124 VARPGAVFAAVT 135 (257)
T ss_dssp HEEEEEEEEEEE
T ss_pred HcCCCCEEEEEE
Confidence 999999998854
No 85
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.56 E-value=3.7e-14 Score=126.85 Aligned_cols=157 Identities=13% Similarity=0.150 Sum_probs=104.6
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHH------HHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccC
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSN------RVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGD 132 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~------~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
+.++.+|||||||+|.++..++..+ +..+|+|+|+|+. +++.|++++..
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~------------------------ 96 (275)
T 3bkx_A 41 VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLA------------------------ 96 (275)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHT------------------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHh------------------------
Confidence 3578999999999999999999986 4469999999997 89999887654
Q ss_pred CcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecc-ccc-CCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH
Q 047406 133 GLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQEN-FVH-GRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d-~~~-~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
.++..++.+...| +.. ..+.+.++||+|+|..+++++. +...+++.+.
T Consensus 97 ------------------------~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~------~~~~~~~~~~ 146 (275)
T 3bkx_A 97 ------------------------GPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFA------SANALALLFK 146 (275)
T ss_dssp ------------------------STTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSS------CHHHHHHHHH
T ss_pred ------------------------cCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCC------CHHHHHHHHH
Confidence 2333468888887 432 2344568899999999997652 2345777777
Q ss_pred hhcCCCcEEEEeeCCCchh--hhhhhh-hhhhh--------c-ccccc-ccCchhHHHHHHHHcCCeeeEeccC
Q 047406 211 KLLRPGGIFVLEPQPWVSY--EKNRRV-SETTA--------T-NFQNI-KLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 211 ~~LkpgG~l~i~~~~~~~~--~~~~~~-~~~~~--------~-~~~~~-~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
.+++|||++++........ ...... ..... . ..... .+.+.++.+ +++++||++++...-
T Consensus 147 ~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~-~l~~aGf~~~~~~~~ 219 (275)
T 3bkx_A 147 NMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQ-IAHDNTWTYTAGTIV 219 (275)
T ss_dssp HHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHH-HHHHHTCEEEECCCB
T ss_pred HHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHH-HHHHCCCeeEEEEEe
Confidence 7788899999964322111 000000 00000 0 01111 234455544 899999998877554
No 86
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.55 E-value=1.6e-13 Score=119.79 Aligned_cols=142 Identities=18% Similarity=0.170 Sum_probs=101.1
Q ss_pred hhhccCCCcEEEecCC-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 57 KKEWFEGKDCLDIGCN-SGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 57 ~~~~~~~~~vLDiGcG-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
...+.++.+|||+||| +|.++..+++.. ..+|+|+|+|+.+++.|+.++..
T Consensus 50 ~~~~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~--------------------------- 101 (230)
T 3evz_A 50 KTFLRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIER--------------------------- 101 (230)
T ss_dssp HTTCCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHH---------------------------
T ss_pred HhhcCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHH---------------------------
Confidence 4445788999999999 999999998876 56999999999999999998765
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhh-------------cCCchHH
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHL-------------NWGDDGL 202 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l-------------~~~~~~~ 202 (290)
.++ ++.+.+.|+....+.++++||+|+|.....+..- ..+.+..
T Consensus 102 ---------------------~~~--~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (230)
T 3evz_A 102 ---------------------NNS--NVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFS 158 (230)
T ss_dssp ---------------------TTC--CCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHH
T ss_pred ---------------------hCC--CcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHH
Confidence 233 5888999864333344588999999755432110 0122335
Q ss_pred HHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 203 ITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 203 ~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
..++.++.++|+|||++++..+... ....++.+ ++++.||.+..+..
T Consensus 159 ~~~l~~~~~~LkpgG~l~~~~~~~~--------------------~~~~~~~~-~l~~~g~~~~~~~~ 205 (230)
T 3evz_A 159 VKLLEEAFDHLNPGGKVALYLPDKE--------------------KLLNVIKE-RGIKLGYSVKDIKF 205 (230)
T ss_dssp HHHHHHHGGGEEEEEEEEEEEESCH--------------------HHHHHHHH-HHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEEEEecccH--------------------hHHHHHHH-HHHHcCCceEEEEe
Confidence 7899999999999999999533100 11133444 78899997766533
No 87
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.55 E-value=7e-14 Score=125.39 Aligned_cols=137 Identities=16% Similarity=0.148 Sum_probs=99.6
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..+++..+. +|+|+|+++.+++.|+.++..
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~--------------------------------- 94 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAY--------------------------------- 94 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 6889999999999999999988554 999999999999999998876
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCC-CCCCceeEEEEchhhhhh---hh-----------cCCchHHHHHH
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD-SPEKYYDAILCLSVTKWI---HL-----------NWGDDGLITLF 206 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~~~---~l-----------~~~~~~~~~~l 206 (290)
.++.+++.+.+.|+.+... .+.++||+|+|+...... +. ......+..++
T Consensus 95 ---------------~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l 159 (259)
T 3lpm_A 95 ---------------NQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTI 159 (259)
T ss_dssp ---------------TTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHHHH
T ss_pred ---------------CCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHH
Confidence 4455569999999877422 346899999996443111 00 00113467899
Q ss_pred HHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 207 MRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 207 ~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
..+.++|+|||++++..++. ...++.. ++.+.||....+..
T Consensus 160 ~~~~~~LkpgG~l~~~~~~~----------------------~~~~~~~-~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 160 RVAASLLKQGGKANFVHRPE----------------------RLLDIID-IMRKYRLEPKRIQF 200 (259)
T ss_dssp HHHHHHEEEEEEEEEEECTT----------------------THHHHHH-HHHHTTEEEEEEEE
T ss_pred HHHHHHccCCcEEEEEEcHH----------------------HHHHHHH-HHHHCCCceEEEEE
Confidence 99999999999999965421 1123333 67788888766543
No 88
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.55 E-value=3.9e-14 Score=127.49 Aligned_cols=132 Identities=17% Similarity=0.097 Sum_probs=100.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.+++.+|..++..+|+++|+|+.+++.|+.++..
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 126 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEV-------------------------------- 126 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 467899999999999999999988888999999999999999998876
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC--CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.++. ++.+.+.|+.+... ...++||+|+|..+. .+..++..+.++|+|||+
T Consensus 127 ----------------~~l~-~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~~----------~~~~ll~~~~~~LkpgG~ 179 (249)
T 3g89_A 127 ----------------LGLK-GARALWGRAEVLAREAGHREAYARAVARAVA----------PLCVLSELLLPFLEVGGA 179 (249)
T ss_dssp ----------------HTCS-SEEEEECCHHHHTTSTTTTTCEEEEEEESSC----------CHHHHHHHHGGGEEEEEE
T ss_pred ----------------hCCC-ceEEEECcHHHhhcccccCCCceEEEECCcC----------CHHHHHHHHHHHcCCCeE
Confidence 3333 38899998866321 124789999997653 356889999999999999
Q ss_pred EEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 219 FVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 219 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+++..+.+.... -.++.. .+.+.||+++++..-
T Consensus 180 l~~~~g~~~~~e-------------------~~~~~~-~l~~~G~~~~~~~~~ 212 (249)
T 3g89_A 180 AVAMKGPRVEEE-------------------LAPLPP-ALERLGGRLGEVLAL 212 (249)
T ss_dssp EEEEECSCCHHH-------------------HTTHHH-HHHHHTEEEEEEEEE
T ss_pred EEEEeCCCcHHH-------------------HHHHHH-HHHHcCCeEEEEEEe
Confidence 998655332110 012223 677889998776543
No 89
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.55 E-value=4.2e-15 Score=141.87 Aligned_cols=146 Identities=18% Similarity=0.191 Sum_probs=100.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++. ..+++|+|+|+.+++.|++. .
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~--~-------------------------------- 149 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK--G-------------------------------- 149 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT--T--------------------------------
T ss_pred CCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc--C--------------------------------
Confidence 46789999999999999999886 34999999999999988763 0
Q ss_pred HHHHHHhhhcCCCccccCcCccee-EeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVS-FKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~-~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
+..... +...+. ..++.+.++||+|+|.++++|+ ++...++.++.++|+|||++
T Consensus 150 ------------------~~~~~~~~~~~~~-~~l~~~~~~fD~I~~~~vl~h~------~d~~~~l~~~~r~LkpgG~l 204 (416)
T 4e2x_A 150 ------------------IRVRTDFFEKATA-DDVRRTEGPANVIYAANTLCHI------PYVQSVLEGVDALLAPDGVF 204 (416)
T ss_dssp ------------------CCEECSCCSHHHH-HHHHHHHCCEEEEEEESCGGGC------TTHHHHHHHHHHHEEEEEEE
T ss_pred ------------------CCcceeeechhhH-hhcccCCCCEEEEEECChHHhc------CCHHHHHHHHHHHcCCCeEE
Confidence 111111 111121 1123345789999999999776 46899999999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+++.+............... ..+..+.+.+....+++++||++++...
T Consensus 205 ~i~~~~~~~~~~~~~~~~~~---~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 205 VFEDPYLGDIVAKTSFDQIF---DEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp EEEEECHHHHHHHTCGGGCS---TTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEEeCChHHhhhhcchhhhh---hhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 99866433322222111111 2344445544455589999999887755
No 90
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.54 E-value=2.9e-14 Score=122.33 Aligned_cols=102 Identities=16% Similarity=0.118 Sum_probs=85.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..++..++..+++++|+|+.+++.|+.++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~--------------------------------- 111 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHE--------------------------------- 111 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHH---------------------------------
Confidence 57899999999999999999988878999999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
.++.. +.+...|+.+. + +.++||+|+|..+ .....++..+.++|+|||.+++
T Consensus 112 ---------------~~~~~-v~~~~~d~~~~-~-~~~~~D~i~~~~~----------~~~~~~l~~~~~~L~~gG~l~~ 163 (207)
T 1jsx_A 112 ---------------LKLEN-IEPVQSRVEEF-P-SEPPFDGVISRAF----------ASLNDMVSWCHHLPGEQGRFYA 163 (207)
T ss_dssp ---------------TTCSS-EEEEECCTTTS-C-CCSCEEEEECSCS----------SSHHHHHHHHTTSEEEEEEEEE
T ss_pred ---------------cCCCC-eEEEecchhhC-C-ccCCcCEEEEecc----------CCHHHHHHHHHHhcCCCcEEEE
Confidence 23333 88999998763 2 3578999998543 3457899999999999999999
Q ss_pred eeC
Q 047406 222 EPQ 224 (290)
Q Consensus 222 ~~~ 224 (290)
..+
T Consensus 164 ~~~ 166 (207)
T 1jsx_A 164 LKG 166 (207)
T ss_dssp EES
T ss_pred EeC
Confidence 754
No 91
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=2.1e-14 Score=126.64 Aligned_cols=109 Identities=15% Similarity=0.209 Sum_probs=83.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..++.. +..+|+|+|+|+.+++.|+++...
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~-------------------------------- 105 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEA-PIDEHWIIECNDGVFQRLRDWAPR-------------------------------- 105 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTS-CEEEEEEEECCHHHHHHHHHHGGG--------------------------------
T ss_pred CCCCeEEEEeccCCHHHHHHHhc-CCCeEEEEcCCHHHHHHHHHHHHh--------------------------------
Confidence 46789999999999999998764 334899999999999999885432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCC-CCCCCceeEEEE-chhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR-DSPEKYYDAILC-LSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~fD~I~~-~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.+ .++.+.+.|+.+.. +.++++||+|+| .+.+. .+ .+.......++.++.++|+|||+
T Consensus 106 ----------------~~--~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~~-~~-~~~~~~~~~~l~~~~r~LkpgG~ 165 (236)
T 1zx0_A 106 ----------------QT--HKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLS-EE-TWHTHQFNFIKNHAFRLLKPGGV 165 (236)
T ss_dssp ----------------CS--SEEEEEESCHHHHGGGSCTTCEEEEEECCCCCB-GG-GTTTHHHHHHHHTHHHHEEEEEE
T ss_pred ----------------cC--CCeEEEecCHHHhhcccCCCceEEEEECCcccc-hh-hhhhhhHHHHHHHHHHhcCCCeE
Confidence 11 35888888886621 456689999999 55431 11 12235567889999999999999
Q ss_pred EEEe
Q 047406 219 FVLE 222 (290)
Q Consensus 219 l~i~ 222 (290)
|++.
T Consensus 166 l~~~ 169 (236)
T 1zx0_A 166 LTYC 169 (236)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 9985
No 92
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.54 E-value=4e-14 Score=119.59 Aligned_cols=117 Identities=10% Similarity=0.045 Sum_probs=84.8
Q ss_pred hhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 56 LKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 56 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
+...+.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++..
T Consensus 16 l~~~~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~--------------------------- 66 (185)
T 3mti_A 16 LAEVLDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSD--------------------------- 66 (185)
T ss_dssp HHTTCCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHH---------------------------
T ss_pred HHHhCCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHH---------------------------
Confidence 3444568899999999999999999987 56999999999999999998765
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEch-hhhhh--hhcCCchHHHHHHHHHHhh
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLS-VTKWI--HLNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~-vl~~~--~l~~~~~~~~~~l~~~~~~ 212 (290)
.++ .++.+.+.+..+....++++||+|++.. .+++. .+....+....++.++.++
T Consensus 67 ---------------------~~~-~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 124 (185)
T 3mti_A 67 ---------------------LGI-ENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDR 124 (185)
T ss_dssp ---------------------HTC-CCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHH
T ss_pred ---------------------cCC-CcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHh
Confidence 233 4578887666542123467899998862 22110 0000124567889999999
Q ss_pred cCCCcEEEEee
Q 047406 213 LRPGGIFVLEP 223 (290)
Q Consensus 213 LkpgG~l~i~~ 223 (290)
|+|||++++..
T Consensus 125 LkpgG~l~i~~ 135 (185)
T 3mti_A 125 LEVGGRLAIMI 135 (185)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 99999999964
No 93
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.54 E-value=1.5e-13 Score=142.00 Aligned_cols=180 Identities=19% Similarity=0.294 Sum_probs=124.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|++++.....
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~ln---------------------------- 771 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLN---------------------------- 771 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTT----------------------------
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccc----------------------------
Confidence 378999999999999999999876 336999999999999999987654100
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
....++ .++.+.++|+.+ ++...++||+|+|..+++|+. ++....++.++.++|+|| .+
T Consensus 772 --------------Akr~gl-~nVefiqGDa~d-Lp~~d~sFDlVV~~eVLeHL~----dp~l~~~L~eI~RvLKPG-~L 830 (950)
T 3htx_A 772 --------------KEACNV-KSATLYDGSILE-FDSRLHDVDIGTCLEVIEHME----EDQACEFGEKVLSLFHPK-LL 830 (950)
T ss_dssp --------------TTCSSC-SEEEEEESCTTS-CCTTSCSCCEEEEESCGGGSC----HHHHHHHHHHHHHTTCCS-EE
T ss_pred --------------hhhcCC-CceEEEECchHh-CCcccCCeeEEEEeCchhhCC----hHHHHHHHHHHHHHcCCC-EE
Confidence 000122 368999999977 566678999999999998763 345568999999999999 78
Q ss_pred EEeeCCCchhhhhhhh-------------hhhhhccccccccCchhHHHH---HHHHcCCeeeEeccCCCCCCCCCCCCc
Q 047406 220 VLEPQPWVSYEKNRRV-------------SETTATNFQNIKLYPKEFQEI---LLDKIGFRTVEDIGSGGLSSSKTGFNR 283 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~---ll~~~Gf~~v~~~~~~~~~~~~~~~~~ 283 (290)
++..++.......... .......-+.+.+..++|..+ ++++.||++ ++.+.|+......|+..
T Consensus 831 IISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTReEFr~Wae~LAer~GYsV-efvGVGDg~ep~vG~~T 909 (950)
T 3htx_A 831 IVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTREQFNQWASKLGKRHNYSV-EFSGVGGSGEVEPGFAS 909 (950)
T ss_dssp EEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHHHHHHHHHHHHHHTTEEE-EEEEESSCSSSTTCCSE
T ss_pred EEEecCchhhhhhhhcccccccccccccccccccccCcceeecHHHHHHHHHHHHHhcCcEE-EEEccCCCCCCCCCCcc
Confidence 8776543211000000 000111112234666666654 778889974 55555555444588888
Q ss_pred ceeeecC
Q 047406 284 PIFLFRK 290 (290)
Q Consensus 284 ~~~~~~k 290 (290)
.+.+|+|
T Consensus 910 QiAVFtR 916 (950)
T 3htx_A 910 QIAIFRR 916 (950)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 8888874
No 94
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.54 E-value=7.5e-15 Score=130.58 Aligned_cols=110 Identities=15% Similarity=0.176 Sum_probs=80.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.+|.+|||||||+|..+..+++..+ .+++++|+|+.+++.|+++...
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~-------------------------------- 105 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPR-------------------------------- 105 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGG--------------------------------
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhh--------------------------------
Confidence 5789999999999999999887654 5899999999999999886443
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccC-CCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHG-RDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
. ...+.+...|+.+. .+.++++||.|++-.+....+ .....+...++.++.++|||||+|
T Consensus 106 ----------------~--~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~-~~~~~~~~~~~~e~~rvLkPGG~l 166 (236)
T 3orh_A 106 ----------------Q--THKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEE-TWHTHQFNFIKNHAFRLLKPGGVL 166 (236)
T ss_dssp ----------------C--SSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGG-GTTTHHHHHHHHTHHHHEEEEEEE
T ss_pred ----------------C--CCceEEEeehHHhhcccccccCCceEEEeeeecccc-hhhhcchhhhhhhhhheeCCCCEE
Confidence 1 12466666665442 234668899998632211000 012257789999999999999999
Q ss_pred EEe
Q 047406 220 VLE 222 (290)
Q Consensus 220 ~i~ 222 (290)
++.
T Consensus 167 ~f~ 169 (236)
T 3orh_A 167 TYC 169 (236)
T ss_dssp EEC
T ss_pred EEE
Confidence 884
No 95
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.53 E-value=5.1e-14 Score=128.27 Aligned_cols=154 Identities=14% Similarity=0.155 Sum_probs=96.3
Q ss_pred cCCCcEEEecCCCChhhHHH----HhHcCCceE--EEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCc
Q 047406 61 FEGKDCLDIGCNSGIITIQI----AQKFNCRSI--LGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGL 134 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~l----a~~~~~~~i--~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (290)
.++.+|||||||+|.++..+ +..++...| +|+|+|+.+++.|++.+...
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~------------------------- 105 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKT------------------------- 105 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTC-------------------------
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhc-------------------------
Confidence 35679999999999766533 344455544 99999999999998865420
Q ss_pred chhhhhHHHHHHhhhcCCCccccCcCc-ceeEeecccccCC-----CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHH
Q 047406 135 EKNVTAAQEEKKAISRNCSPAERNLFD-IVSFKQENFVHGR-----DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMR 208 (290)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~-----~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~ 208 (290)
.++.. .+.+.+.+..+.. +.++++||+|+|..+++|+ +++...+.+
T Consensus 106 ----------------------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~------~d~~~~l~~ 157 (292)
T 2aot_A 106 ----------------------SNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYV------KDIPATLKF 157 (292)
T ss_dssp ----------------------SSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGC------SCHHHHHHH
T ss_pred ----------------------cCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeec------CCHHHHHHH
Confidence 11111 1334444443210 1346789999999999887 467899999
Q ss_pred HHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccc---cccc-cCchhHHHHHHHHcCCeeeEecc
Q 047406 209 IWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNF---QNIK-LYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 209 ~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+.++|+|||.+++......+.. ........... .+.. +.+.++.. +++++||+++....
T Consensus 158 ~~r~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~aGf~~~~~~~ 220 (292)
T 2aot_A 158 FHSLLGTNAKMLIIVVSGSSGW--DKLWKKYGSRFPQDDLCQYITSDDLTQ-MLDNLGLKYECYDL 220 (292)
T ss_dssp HHHTEEEEEEEEEEEECTTSHH--HHHHHHHGGGSCCCTTCCCCCHHHHHH-HHHHHTCCEEEEEE
T ss_pred HHHHcCCCcEEEEEEecCCccH--HHHHHHHHHhccCCCcccCCCHHHHHH-HHHHCCCceEEEEe
Confidence 9999999999999642211100 00000000000 1122 34455555 89999999877433
No 96
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.53 E-value=8.4e-14 Score=127.87 Aligned_cols=120 Identities=15% Similarity=0.217 Sum_probs=89.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|+.+.......
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~---------------------------- 83 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG-RINKLVCTDIADVSVKQCQQRYEDMKNR---------------------------- 83 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHHSS----------------------------
T ss_pred CCCCEEEEECCCCcHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHHHHHhhhc----------------------------
Confidence 47789999999999999988874 4569999999999999999876541000
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCC---CC--CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR---DS--PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~---~~--~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
. ......++.+.+.|+.+.. +. +.++||+|+|..++||+.- +.++...++.++.++|+|
T Consensus 84 -------------~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~--~~~~~~~~l~~~~~~Lkp 147 (313)
T 3bgv_A 84 -------------R-DSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFE--SYEQADMMLRNACERLSP 147 (313)
T ss_dssp -------------S-CC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGG--SHHHHHHHHHHHHTTEEE
T ss_pred -------------c-cccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccC--CHHHHHHHHHHHHHHhCC
Confidence 0 0001235888999987631 12 3458999999999998721 235678999999999999
Q ss_pred CcEEEEeeCC
Q 047406 216 GGIFVLEPQP 225 (290)
Q Consensus 216 gG~l~i~~~~ 225 (290)
||.+++..+.
T Consensus 148 gG~li~~~~~ 157 (313)
T 3bgv_A 148 GGYFIGTTPN 157 (313)
T ss_dssp EEEEEEEEEC
T ss_pred CcEEEEecCC
Confidence 9999997654
No 97
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.53 E-value=1.1e-13 Score=125.05 Aligned_cols=141 Identities=15% Similarity=0.162 Sum_probs=103.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+.++..
T Consensus 119 ~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 164 (286)
T 3m70_A 119 ISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEK-------------------------------- 164 (286)
T ss_dssp SCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 37899999999999999999887 45999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++ ++.+...|+.+. +. .++||+|+|..+++|+. .+....++.++.++|+|||+++
T Consensus 165 ----------------~~~--~~~~~~~d~~~~-~~-~~~fD~i~~~~~~~~~~----~~~~~~~l~~~~~~LkpgG~l~ 220 (286)
T 3m70_A 165 ----------------ENL--NISTALYDINAA-NI-QENYDFIVSTVVFMFLN----RERVPSIIKNMKEHTNVGGYNL 220 (286)
T ss_dssp ----------------TTC--CEEEEECCGGGC-CC-CSCEEEEEECSSGGGSC----GGGHHHHHHHHHHTEEEEEEEE
T ss_pred ----------------cCC--ceEEEEeccccc-cc-cCCccEEEEccchhhCC----HHHHHHHHHHHHHhcCCCcEEE
Confidence 233 588999998773 33 68899999999997663 4678899999999999999988
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+........ ..........+.+.++.+ ++ .+|++++...
T Consensus 221 i~~~~~~~~--------~~~~~~~~~~~~~~~l~~-~~--~~~~~~~~~~ 259 (286)
T 3m70_A 221 IVAAMSTDD--------VPCPLPFSFTFAENELKE-YY--KDWEFLEYNE 259 (286)
T ss_dssp EEEEBCCSS--------SCCSSCCSCCBCTTHHHH-HT--TTSEEEEEEC
T ss_pred EEEecCCCC--------CCCCCCccccCCHHHHHH-Hh--cCCEEEEEEc
Confidence 753211100 000111123455666665 44 3498887643
No 98
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.53 E-value=5.2e-14 Score=126.58 Aligned_cols=134 Identities=22% Similarity=0.301 Sum_probs=101.5
Q ss_pred hHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccC
Q 047406 53 FKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGD 132 (290)
Q Consensus 53 l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
++.+...+.++.+|||+|||+|.+++.+++. +. +|+|+|+|+.+++.|+.++..
T Consensus 111 ~~~l~~~~~~~~~VLDiGcG~G~l~~~la~~-g~-~v~gvDi~~~~v~~a~~n~~~------------------------ 164 (254)
T 2nxc_A 111 LKALARHLRPGDKVLDLGTGSGVLAIAAEKL-GG-KALGVDIDPMVLPQAEANAKR------------------------ 164 (254)
T ss_dssp HHHHHHHCCTTCEEEEETCTTSHHHHHHHHT-TC-EEEEEESCGGGHHHHHHHHHH------------------------
T ss_pred HHHHHHhcCCCCEEEEecCCCcHHHHHHHHh-CC-eEEEEECCHHHHHHHHHHHHH------------------------
Confidence 3445555678899999999999999998875 33 999999999999999998765
Q ss_pred CcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhh
Q 047406 133 GLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~ 212 (290)
+++. +.+...|+.+. .+.++||+|+++... +.+..++.++.++
T Consensus 165 ------------------------~~~~--v~~~~~d~~~~--~~~~~fD~Vv~n~~~---------~~~~~~l~~~~~~ 207 (254)
T 2nxc_A 165 ------------------------NGVR--PRFLEGSLEAA--LPFGPFDLLVANLYA---------ELHAALAPRYREA 207 (254)
T ss_dssp ------------------------TTCC--CEEEESCHHHH--GGGCCEEEEEEECCH---------HHHHHHHHHHHHH
T ss_pred ------------------------cCCc--EEEEECChhhc--CcCCCCCEEEECCcH---------HHHHHHHHHHHHH
Confidence 2332 77888887653 234689999997654 3457899999999
Q ss_pred cCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 213 LRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 213 LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
|+|||+++++.... ...+++.+ +++++||++++....
T Consensus 208 LkpgG~lils~~~~---------------------~~~~~v~~-~l~~~Gf~~~~~~~~ 244 (254)
T 2nxc_A 208 LVPGGRALLTGILK---------------------DRAPLVRE-AMAGAGFRPLEEAAE 244 (254)
T ss_dssp EEEEEEEEEEEEEG---------------------GGHHHHHH-HHHHTTCEEEEEEEE
T ss_pred cCCCCEEEEEeecc---------------------CCHHHHHH-HHHHCCCEEEEEecc
Confidence 99999999963200 11234444 788999999988776
No 99
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.53 E-value=1.2e-13 Score=118.19 Aligned_cols=119 Identities=17% Similarity=0.245 Sum_probs=91.8
Q ss_pred hHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccC
Q 047406 53 FKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGD 132 (290)
Q Consensus 53 l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
...+.+.+.++.+|||+|||+|.++..+++..+. +|+|+|+|+.+++.++.+...
T Consensus 33 ~~~l~~~~~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~------------------------ 87 (215)
T 2pxx_A 33 RALLEPELRPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH------------------------ 87 (215)
T ss_dssp HHHHGGGCCTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT------------------------
T ss_pred HHHHHHhcCCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc------------------------
Confidence 3445555678899999999999999999887433 899999999999999875321
Q ss_pred CcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhc----C-----CchHHH
Q 047406 133 GLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLN----W-----GDDGLI 203 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~----~-----~~~~~~ 203 (290)
...+.+...|+.+ .+.+.++||+|++..+++++... | ......
T Consensus 88 ---------------------------~~~i~~~~~d~~~-~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (215)
T 2pxx_A 88 ---------------------------VPQLRWETMDVRK-LDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVD 139 (215)
T ss_dssp ---------------------------CTTCEEEECCTTS-CCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHH
T ss_pred ---------------------------CCCcEEEEcchhc-CCCCCCcccEEEECcchhhhccccccccccccchhHHHH
Confidence 1257888888866 35566789999999888654210 0 124668
Q ss_pred HHHHHHHhhcCCCcEEEEeeC
Q 047406 204 TLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 204 ~~l~~~~~~LkpgG~l~i~~~ 224 (290)
.++.++.++|+|||.+++...
T Consensus 140 ~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 140 QVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHhCcCCCEEEEEeC
Confidence 999999999999999999754
No 100
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.52 E-value=6e-13 Score=115.76 Aligned_cols=127 Identities=16% Similarity=0.136 Sum_probs=96.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|++++..
T Consensus 53 ~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~------------------------------- 99 (204)
T 3njr_A 53 PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDT------------------------------- 99 (204)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHH-------------------------------
Confidence 357889999999999999999887 56999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++.+++.+...|+.+..+. ...||+|++...+ ... ++.++.++|+|||++
T Consensus 100 -----------------~g~~~~v~~~~~d~~~~~~~-~~~~D~v~~~~~~----------~~~-~l~~~~~~LkpgG~l 150 (204)
T 3njr_A 100 -----------------YGLSPRMRAVQGTAPAALAD-LPLPEAVFIGGGG----------SQA-LYDRLWEWLAPGTRI 150 (204)
T ss_dssp -----------------TTCTTTEEEEESCTTGGGTT-SCCCSEEEECSCC----------CHH-HHHHHHHHSCTTCEE
T ss_pred -----------------cCCCCCEEEEeCchhhhccc-CCCCCEEEECCcc----------cHH-HHHHHHHhcCCCcEE
Confidence 34444688999998763222 3579999986543 234 899999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
++...... ...+..+ ++++.||++..+..
T Consensus 151 v~~~~~~~---------------------~~~~~~~-~l~~~g~~i~~i~~ 179 (204)
T 3njr_A 151 VANAVTLE---------------------SETLLTQ-LHARHGGQLLRIDI 179 (204)
T ss_dssp EEEECSHH---------------------HHHHHHH-HHHHHCSEEEEEEE
T ss_pred EEEecCcc---------------------cHHHHHH-HHHhCCCcEEEEEe
Confidence 99754211 0122333 67889998777643
No 101
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.52 E-value=7.7e-14 Score=122.35 Aligned_cols=121 Identities=16% Similarity=0.171 Sum_probs=92.5
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchh
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKN 137 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (290)
....++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++.+.
T Consensus 44 ~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~------------------------------- 90 (226)
T 3m33_A 44 RLLTPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANA------------------------------- 90 (226)
T ss_dssp HHCCTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHC-------------------------------
T ss_pred hcCCCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhC-------------------------------
Confidence 33467899999999999999999887 459999999999999998741
Q ss_pred hhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 138 VTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
.++.+.+.|+.+.++.+ +++||+|+|.. ++..++.++.++|+||
T Consensus 91 -----------------------~~~~~~~~d~~~~~~~~~~~~fD~v~~~~------------~~~~~l~~~~~~Lkpg 135 (226)
T 3m33_A 91 -----------------------PHADVYEWNGKGELPAGLGAPFGLIVSRR------------GPTSVILRLPELAAPD 135 (226)
T ss_dssp -----------------------TTSEEEECCSCSSCCTTCCCCEEEEEEES------------CCSGGGGGHHHHEEEE
T ss_pred -----------------------CCceEEEcchhhccCCcCCCCEEEEEeCC------------CHHHHHHHHHHHcCCC
Confidence 14788999986656666 78999999862 2346678999999999
Q ss_pred cEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEec
Q 047406 217 GIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 217 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
|.++.... ......+.. ++.++||+.+...
T Consensus 136 G~l~~~~~----------------------~~~~~~~~~-~l~~~Gf~~~~~~ 165 (226)
T 3m33_A 136 AHFLYVGP----------------------RLNVPEVPE-RLAAVGWDIVAED 165 (226)
T ss_dssp EEEEEEES----------------------SSCCTHHHH-HHHHTTCEEEEEE
T ss_pred cEEEEeCC----------------------cCCHHHHHH-HHHHCCCeEEEEE
Confidence 99993211 122334444 7788898877654
No 102
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.52 E-value=3.9e-14 Score=127.90 Aligned_cols=159 Identities=11% Similarity=0.041 Sum_probs=100.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|..+..||+. +.+|+|+|+|+.+++.|++..... +........ .+-+.+
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~-------~~~~~~~~~----~~~~~~----- 128 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLS-------YTEEPLAEI----AGAKVF----- 128 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCC-------EEEEECTTS----TTCEEE-----
T ss_pred CCCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccc-------ccccccccc----cccccc-----
Confidence 47889999999999999999986 458999999999999986532100 000000000 000000
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.....++.+.++|+.+ ++.. .++||+|++..++++++ .+....++.++.++|+|||++
T Consensus 129 ----------------~~~~~~i~~~~~D~~~-l~~~~~~~FD~V~~~~~l~~l~----~~~~~~~l~~~~~~LkpGG~l 187 (252)
T 2gb4_A 129 ----------------KSSSGSISLYCCSIFD-LPRANIGKFDRIWDRGALVAIN----PGDHDRYADIILSLLRKEFQY 187 (252)
T ss_dssp ----------------EETTSSEEEEESCTTT-GGGGCCCCEEEEEESSSTTTSC----GGGHHHHHHHHHHTEEEEEEE
T ss_pred ----------------ccCCCceEEEECcccc-CCcccCCCEEEEEEhhhhhhCC----HHHHHHHHHHHHHHcCCCeEE
Confidence 0012358999999977 3433 37899999998886553 356778999999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
++....+. .. . .......+.++++.+ ++.. +|+++....
T Consensus 188 ~l~~~~~~---~~-~------~~g~~~~~~~~el~~-~l~~-~f~v~~~~~ 226 (252)
T 2gb4_A 188 LVAVLSYD---PT-K------HAGPPFYVPSAELKR-LFGT-KCSMQCLEE 226 (252)
T ss_dssp EEEEEECC---TT-S------CCCSSCCCCHHHHHH-HHTT-TEEEEEEEE
T ss_pred EEEEEecC---Cc-c------CCCCCCCCCHHHHHH-HhhC-CeEEEEEec
Confidence 75432111 00 0 001112245566666 6665 699876643
No 103
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.52 E-value=1.1e-13 Score=126.85 Aligned_cols=152 Identities=18% Similarity=0.234 Sum_probs=105.1
Q ss_pred HHHhhhcC-CCccccccccccccccccCC--C-CCchh----hHHhhhhc--cCCCcEEEecCCCChhhHHHHhHcCCce
Q 047406 19 QQLKKRKG-KDVFPFGNYKNYYGYRIGQG--L-NEDPR----FKVLKKEW--FEGKDCLDIGCNSGIITIQIAQKFNCRS 88 (290)
Q Consensus 19 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~-~~~~~----l~~l~~~~--~~~~~vLDiGcG~G~~~~~la~~~~~~~ 88 (290)
...+...+ ..+|+.| ..+||+..|.-. + ...+. .+.+...+ .++.+|||+|||+|.+++.++.. +..+
T Consensus 71 ~~~~r~~~~p~~yi~g-~~~f~~~~~~v~~~~lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~ 148 (284)
T 1nv8_A 71 LVEKRASGYPLHYILG-EKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAI 148 (284)
T ss_dssp HHHHHHTTCCHHHHHT-EEEETTEEEECCTTSCCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCE
T ss_pred HHHHHHCCCCCeEEee-eeEECCeEEEeCCCceecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCE
Confidence 33333444 3788888 678988776311 1 11121 22232222 26789999999999999999998 8889
Q ss_pred EEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeec
Q 047406 89 ILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQE 168 (290)
Q Consensus 89 i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 168 (290)
|+|+|+|+.+++.|+.++.. .++..++.|.+.
T Consensus 149 v~~vDis~~al~~A~~n~~~------------------------------------------------~~l~~~v~~~~~ 180 (284)
T 1nv8_A 149 VFATDVSSKAVEIARKNAER------------------------------------------------HGVSDRFFVRKG 180 (284)
T ss_dssp EEEEESCHHHHHHHHHHHHH------------------------------------------------TTCTTSEEEEES
T ss_pred EEEEECCHHHHHHHHHHHHH------------------------------------------------cCCCCceEEEEC
Confidence 99999999999999998876 344445899999
Q ss_pred ccccCCCCCCCce---eEEEEchh------------hh--hhhhcCCchHHHHHHHHHH-hhcCCCcEEEEeeC
Q 047406 169 NFVHGRDSPEKYY---DAILCLSV------------TK--WIHLNWGDDGLITLFMRIW-KLLRPGGIFVLEPQ 224 (290)
Q Consensus 169 d~~~~~~~~~~~f---D~I~~~~v------------l~--~~~l~~~~~~~~~~l~~~~-~~LkpgG~l~i~~~ 224 (290)
|+.+.. .++| |+|+|+.- .+ ...+..+.+ ...++.++. +.|+|||.++++.+
T Consensus 181 D~~~~~---~~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~d-gl~~~~~i~~~~l~pgG~l~~e~~ 250 (284)
T 1nv8_A 181 EFLEPF---KEKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGED-GLDFYREFFGRYDTSGKIVLMEIG 250 (284)
T ss_dssp STTGGG---GGGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTT-SCHHHHHHHHHCCCTTCEEEEECC
T ss_pred cchhhc---ccccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCc-HHHHHHHHHHhcCCCCCEEEEEEC
Confidence 987632 2478 99999621 10 011221222 237899999 99999999999876
No 104
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.52 E-value=1.4e-13 Score=120.38 Aligned_cols=113 Identities=9% Similarity=0.114 Sum_probs=86.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||||||+|.++..+|+.++..+++|+|+|+.+++.|+.++..
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~--------------------------------- 84 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKD--------------------------------- 84 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH---------------------------------
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHH---------------------------------
Confidence 57899999999999999999998888999999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCC--CCCCceeEEEEchhhhhhhhcCCch--HHHHHHHHHHhhcCCCc
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--SPEKYYDAILCLSVTKWIHLNWGDD--GLITLFMRIWKLLRPGG 217 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~fD~I~~~~vl~~~~l~~~~~--~~~~~l~~~~~~LkpgG 217 (290)
.++ .++.+.+.|+.+ ++ .+.+.||.|++.....|..-..... ....++.++.++|+|||
T Consensus 85 ---------------~~~-~nv~~~~~d~~~-l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG 147 (213)
T 2fca_A 85 ---------------SEA-QNVKLLNIDADT-LTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGG 147 (213)
T ss_dssp ---------------SCC-SSEEEECCCGGG-HHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSC
T ss_pred ---------------cCC-CCEEEEeCCHHH-HHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCC
Confidence 233 358899999876 22 3567899999865443321000000 13678999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
.+++...
T Consensus 148 ~l~~~td 154 (213)
T 2fca_A 148 SIHFKTD 154 (213)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9999754
No 105
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.52 E-value=5.7e-14 Score=131.44 Aligned_cols=151 Identities=13% Similarity=0.155 Sum_probs=104.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|..+..+++.++..+++++|+ +.++. +..+.
T Consensus 183 ~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~--------------------------------- 226 (348)
T 3lst_A 183 PATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLD--------------------------------- 226 (348)
T ss_dssp CSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCC---------------------------------
T ss_pred cCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccc---------------------------------
Confidence 5678999999999999999999998889999999 44443 11100
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++..++.+...|+.+. .| +||+|++.+++|+ |+++....+++++.++|+|||.++
T Consensus 227 ---------------~~~~~~~v~~~~~d~~~~--~p--~~D~v~~~~vlh~----~~d~~~~~~L~~~~~~LkpgG~l~ 283 (348)
T 3lst_A 227 ---------------APDVAGRWKVVEGDFLRE--VP--HADVHVLKRILHN----WGDEDSVRILTNCRRVMPAHGRVL 283 (348)
T ss_dssp ---------------CGGGTTSEEEEECCTTTC--CC--CCSEEEEESCGGG----SCHHHHHHHHHHHHHTCCTTCEEE
T ss_pred ---------------ccCCCCCeEEEecCCCCC--CC--CCcEEEEehhccC----CCHHHHHHHHHHHHHhcCCCCEEE
Confidence 123445799999999743 33 8999999999964 345666899999999999999999
Q ss_pred EeeCCCchhhhh--hhhh-hhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKN--RRVS-ETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+....+...... .... ............+.+++.+ +++++||+++++...
T Consensus 284 i~e~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~-ll~~aGf~~~~~~~~ 336 (348)
T 3lst_A 284 VIDAVVPEGNDAHQSKEMDFMMLAARTGQERTAAELEP-LFTAAGLRLDRVVGT 336 (348)
T ss_dssp EEECCBCSSSSCCHHHHHHHHHHHTTSCCCCBHHHHHH-HHHHTTEEEEEEEEC
T ss_pred EEEeccCCCCCcchhhhcChhhhhcCCCcCCCHHHHHH-HHHHCCCceEEEEEC
Confidence 965432211000 0000 0111112222345566666 899999999998764
No 106
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.51 E-value=8.1e-14 Score=122.76 Aligned_cols=112 Identities=16% Similarity=0.117 Sum_probs=87.8
Q ss_pred hHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccC
Q 047406 53 FKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGD 132 (290)
Q Consensus 53 l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
+..+.....++.+|||+|||+|.++..+++..+ +|+|+|+|+.+++.|+.+..
T Consensus 47 ~~~~~~~~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------------------------- 99 (245)
T 3ggd_A 47 LPRFELLFNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------------------------- 99 (245)
T ss_dssp HHHHTTTSCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC-------------------------
T ss_pred HHHHhhccCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc-------------------------
Confidence 334444557889999999999999999999855 89999999999999987431
Q ss_pred CcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-----CCceeEEEEchhhhhhhhcCCchHHHHHHH
Q 047406 133 GLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-----EKYYDAILCLSVTKWIHLNWGDDGLITLFM 207 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~ 207 (290)
..++.+.+.|+.+. +.. ...||+|+|..+++|+. .++...++.
T Consensus 100 ---------------------------~~~~~~~~~d~~~~-~~~~~~~~~~~~d~v~~~~~~~~~~----~~~~~~~l~ 147 (245)
T 3ggd_A 100 ---------------------------AANISYRLLDGLVP-EQAAQIHSEIGDANIYMRTGFHHIP----VEKRELLGQ 147 (245)
T ss_dssp ---------------------------CTTEEEEECCTTCH-HHHHHHHHHHCSCEEEEESSSTTSC----GGGHHHHHH
T ss_pred ---------------------------ccCceEEECccccc-ccccccccccCccEEEEcchhhcCC----HHHHHHHHH
Confidence 12588888888662 111 12489999999997663 457899999
Q ss_pred HHHhhcCCCcEEEEee
Q 047406 208 RIWKLLRPGGIFVLEP 223 (290)
Q Consensus 208 ~~~~~LkpgG~l~i~~ 223 (290)
++.++|+|||++++..
T Consensus 148 ~~~~~LkpgG~l~i~~ 163 (245)
T 3ggd_A 148 SLRILLGKQGAMYLIE 163 (245)
T ss_dssp HHHHHHTTTCEEEEEE
T ss_pred HHHHHcCCCCEEEEEe
Confidence 9999999999987754
No 107
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.51 E-value=7.1e-14 Score=120.24 Aligned_cols=107 Identities=16% Similarity=0.273 Sum_probs=85.4
Q ss_pred HhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCc
Q 047406 55 VLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGL 134 (290)
Q Consensus 55 ~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (290)
.+.....++.+|||+|||+|.++..+ +..+++|+|+|+.+++.++.+.
T Consensus 29 ~l~~~~~~~~~vLdiG~G~G~~~~~l----~~~~v~~vD~s~~~~~~a~~~~---------------------------- 76 (211)
T 2gs9_A 29 ALKGLLPPGESLLEVGAGTGYWLRRL----PYPQKVGVEPSEAMLAVGRRRA---------------------------- 76 (211)
T ss_dssp HHHTTCCCCSEEEEETCTTCHHHHHC----CCSEEEEECCCHHHHHHHHHHC----------------------------
T ss_pred HHHHhcCCCCeEEEECCCCCHhHHhC----CCCeEEEEeCCHHHHHHHHHhC----------------------------
Confidence 34444457899999999999988775 2338999999999999988742
Q ss_pred chhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 135 EKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
..+.+...|+.+ ++.++++||+|+|..+++|+ ++...++.++.++|+
T Consensus 77 --------------------------~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~------~~~~~~l~~~~~~L~ 123 (211)
T 2gs9_A 77 --------------------------PEATWVRAWGEA-LPFPGESFDVVLLFTTLEFV------EDVERVLLEARRVLR 123 (211)
T ss_dssp --------------------------TTSEEECCCTTS-CCSCSSCEEEEEEESCTTTC------SCHHHHHHHHHHHEE
T ss_pred --------------------------CCcEEEEccccc-CCCCCCcEEEEEEcChhhhc------CCHHHHHHHHHHHcC
Confidence 247788888765 45667899999999999765 357899999999999
Q ss_pred CCcEEEEeeCCC
Q 047406 215 PGGIFVLEPQPW 226 (290)
Q Consensus 215 pgG~l~i~~~~~ 226 (290)
|||.+++...+.
T Consensus 124 pgG~l~i~~~~~ 135 (211)
T 2gs9_A 124 PGGALVVGVLEA 135 (211)
T ss_dssp EEEEEEEEEECT
T ss_pred CCCEEEEEecCC
Confidence 999999976543
No 108
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.50 E-value=5.3e-14 Score=121.49 Aligned_cols=106 Identities=20% Similarity=0.365 Sum_probs=87.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+.++..
T Consensus 50 ~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 95 (216)
T 3ofk_A 50 GAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKR-------------------------------- 95 (216)
T ss_dssp SSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTT--------------------------------
T ss_pred CCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhccc--------------------------------
Confidence 456899999999999999998874 4899999999999999885432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++.+.+.|+.+. + +.++||+|+|..+++|+. +.+.+..++.++.++|+|||+++
T Consensus 96 -------------------~~~~~~~~~d~~~~-~-~~~~fD~v~~~~~l~~~~---~~~~~~~~l~~~~~~L~pgG~l~ 151 (216)
T 3ofk_A 96 -------------------WSHISWAATDILQF-S-TAELFDLIVVAEVLYYLE---DMTQMRTAIDNMVKMLAPGGHLV 151 (216)
T ss_dssp -------------------CSSEEEEECCTTTC-C-CSCCEEEEEEESCGGGSS---SHHHHHHHHHHHHHTEEEEEEEE
T ss_pred -------------------CCCeEEEEcchhhC-C-CCCCccEEEEccHHHhCC---CHHHHHHHHHHHHHHcCCCCEEE
Confidence 12588999998773 3 568999999999997763 22456789999999999999999
Q ss_pred EeeC
Q 047406 221 LEPQ 224 (290)
Q Consensus 221 i~~~ 224 (290)
+...
T Consensus 152 ~~~~ 155 (216)
T 3ofk_A 152 FGSA 155 (216)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9654
No 109
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.50 E-value=2e-13 Score=129.08 Aligned_cols=146 Identities=18% Similarity=0.223 Sum_probs=104.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++.+|..+++++|+ +.+++.|+.
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------------------------------ 244 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA------------------------------------ 244 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------------------------------
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh------------------------------------
Confidence 4568999999999999999999999889999999 877655432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++.+..+|+.+ +.+.. |+|++..++|+ |.++....+|++++++|+|||.++
T Consensus 245 -------------------~~~v~~~~~d~~~--~~p~~--D~v~~~~vlh~----~~~~~~~~~l~~~~~~L~pgG~l~ 297 (368)
T 3reo_A 245 -------------------FSGVEHLGGDMFD--GVPKG--DAIFIKWICHD----WSDEHCLKLLKNCYAALPDHGKVI 297 (368)
T ss_dssp -------------------CTTEEEEECCTTT--CCCCC--SEEEEESCGGG----BCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -------------------cCCCEEEecCCCC--CCCCC--CEEEEechhhc----CCHHHHHHHHHHHHHHcCCCCEEE
Confidence 1358999999876 34433 99999999864 346777899999999999999999
Q ss_pred EeeCCCchhhh------hhhhhhhh-hcc-ccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEK------NRRVSETT-ATN-FQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~------~~~~~~~~-~~~-~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+....+..... ........ ... ......+.+++.+ +++++||+.+++...
T Consensus 298 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~~~-ll~~AGF~~v~~~~~ 355 (368)
T 3reo_A 298 VAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQA-LAMASGFRGFKVASC 355 (368)
T ss_dssp EEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHHHH-HHHHTTCCEEEEEEE
T ss_pred EEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHHHH-HHHHCCCeeeEEEEe
Confidence 96543211100 00111111 111 1223345566766 899999999988765
No 110
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.50 E-value=9.4e-15 Score=124.82 Aligned_cols=138 Identities=17% Similarity=0.126 Sum_probs=81.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.|+.++..
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 76 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAER-------------------------------- 76 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC---------------------------------------------
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 578899999999999999999988777999999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCC---CCCceeEEEEchhhhh------h-----------hhcC---
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS---PEKYYDAILCLSVTKW------I-----------HLNW--- 197 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~~------~-----------~l~~--- 197 (290)
.++ ++.+.+.|+.+..+. ..++||+|+|.....+ + .+..
T Consensus 77 ----------------~~~--~~~~~~~d~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (215)
T 4dzr_A 77 ----------------FGA--VVDWAAADGIEWLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGED 138 (215)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTTCCBSEEEECCCCCC------------------------C
T ss_pred ----------------hCC--ceEEEEcchHhhhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCc
Confidence 122 466777776552111 1278999999533211 0 0000
Q ss_pred CchHHHHHHHHHHhhcCCCcE-EEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHH--HcCCeeeEeccC
Q 047406 198 GDDGLITLFMRIWKLLRPGGI-FVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLD--KIGFRTVEDIGS 271 (290)
Q Consensus 198 ~~~~~~~~l~~~~~~LkpgG~-l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~--~~Gf~~v~~~~~ 271 (290)
+.+....++.++.++|+|||+ +++..+. ...+.+.+ ++. +.||..+++..+
T Consensus 139 ~~~~~~~~l~~~~~~LkpgG~l~~~~~~~----------------------~~~~~~~~-~l~~~~~gf~~~~~~~~ 192 (215)
T 4dzr_A 139 GLQFYRRMAALPPYVLARGRAGVFLEVGH----------------------NQADEVAR-LFAPWRERGFRVRKVKD 192 (215)
T ss_dssp TTHHHHHHHTCCGGGBCSSSEEEEEECTT----------------------SCHHHHHH-HTGGGGGGTEECCEEEC
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEEECC----------------------ccHHHHHH-HHHHhhcCCceEEEEEe
Confidence 111127888999999999999 6665431 11233333 677 889988877665
No 111
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.49 E-value=2.8e-13 Score=123.47 Aligned_cols=177 Identities=10% Similarity=0.074 Sum_probs=103.4
Q ss_pred CccccccccccccccccCCCCCchhhHHhhhh--ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeC-CHHHHHHHHH
Q 047406 28 DVFPFGNYKNYYGYRIGQGLNEDPRFKVLKKE--WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDI-DSNRVADAYW 104 (290)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Di-s~~~l~~a~~ 104 (290)
..+..| ...||+..+ ........+.+... ..++.+|||+|||+|.+++.++.. +..+|+++|+ |+.+++.|+.
T Consensus 46 ~~~i~g-~~~~~g~~~--~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~ 121 (281)
T 3bzb_A 46 QVQTTQ-EHPLWTSHV--WSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLES 121 (281)
T ss_dssp EEECC--------------CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHH
T ss_pred EEEECC-CCCCCCcee--ecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHH
Confidence 455666 456666444 11111112333322 257889999999999999988775 4458999999 8999999999
Q ss_pred HHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcC----cceeEeecccccCCC-C---
Q 047406 105 HLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLF----DIVSFKQENFVHGRD-S--- 176 (290)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~i~~~~~d~~~~~~-~--- 176 (290)
++..... ...++. .++.+...++.+... .
T Consensus 122 n~~~N~~-------------------------------------------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 158 (281)
T 3bzb_A 122 NIREHTA-------------------------------------------NSCSSETVKRASPKVVPYRWGDSPDSLQRC 158 (281)
T ss_dssp HHHTTCC-----------------------------------------------------CCCEEEECCTTSCTHHHHHH
T ss_pred HHHHhhh-------------------------------------------hhcccccCCCCCeEEEEecCCCccHHHHhh
Confidence 8732000 001111 246676666543211 1
Q ss_pred -CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC---C--CcEEEEeeCCCchhhhhhhhhhhhhccccccccCc
Q 047406 177 -PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR---P--GGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYP 250 (290)
Q Consensus 177 -~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk---p--gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (290)
+.++||+|++..++++. +....++..+.++|+ | ||++++...+.... +....
T Consensus 159 ~~~~~fD~Ii~~dvl~~~------~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~~----------------~~~~~ 216 (281)
T 3bzb_A 159 TGLQRFQVVLLADLLSFH------QAHDALLRSVKMLLALPANDPTAVALVTFTHHRPH----------------LAERD 216 (281)
T ss_dssp HSCSSBSEEEEESCCSCG------GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC------------------------C
T ss_pred ccCCCCCEEEEeCcccCh------HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeecc----------------cchhH
Confidence 24789999998887432 567899999999999 9 99887753321100 00123
Q ss_pred hhHHHHHHHHcC-CeeeEeccCCCC
Q 047406 251 KEFQEILLDKIG-FRTVEDIGSGGL 274 (290)
Q Consensus 251 ~~~~~~ll~~~G-f~~v~~~~~~~~ 274 (290)
..+.+ .+++.| |++.++.....+
T Consensus 217 ~~~~~-~l~~~G~f~v~~~~~~~~~ 240 (281)
T 3bzb_A 217 LAFFR-LVNADGALIAEPWLSPLQM 240 (281)
T ss_dssp THHHH-HHHHSTTEEEEEEECCC--
T ss_pred HHHHH-HHHhcCCEEEEEecccccc
Confidence 45555 678899 998888655333
No 112
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.49 E-value=1.9e-13 Score=116.56 Aligned_cols=116 Identities=20% Similarity=0.229 Sum_probs=89.7
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
..+.++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.|+.++..
T Consensus 18 ~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~---------------------------- 69 (197)
T 3eey_A 18 MFVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTD---------------------------- 69 (197)
T ss_dssp HHCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHH----------------------------
T ss_pred hcCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH----------------------------
Confidence 345688999999999999999999986 345999999999999999998765
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhh-----hcCCchHHHHHHHHHHh
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIH-----LNWGDDGLITLFMRIWK 211 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~-----l~~~~~~~~~~l~~~~~ 211 (290)
.++..++.+.+.|+.+......++||+|++...+ +. .....+....++.++.+
T Consensus 70 --------------------~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~ 127 (197)
T 3eey_A 70 --------------------LNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGY--LPSGDHSISTRPETTIQALSKAME 127 (197)
T ss_dssp --------------------TTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESB--CTTSCTTCBCCHHHHHHHHHHHHH
T ss_pred --------------------cCCCCCeEEEECCHHHHhhhccCCceEEEEcCCc--ccCcccccccCcccHHHHHHHHHH
Confidence 3344568999999866322445789999987544 11 00122355679999999
Q ss_pred hcCCCcEEEEee
Q 047406 212 LLRPGGIFVLEP 223 (290)
Q Consensus 212 ~LkpgG~l~i~~ 223 (290)
+|+|||++++..
T Consensus 128 ~Lk~gG~l~~~~ 139 (197)
T 3eey_A 128 LLVTGGIITVVI 139 (197)
T ss_dssp HEEEEEEEEEEE
T ss_pred hCcCCCEEEEEE
Confidence 999999999864
No 113
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.49 E-value=2.8e-13 Score=128.06 Aligned_cols=146 Identities=21% Similarity=0.221 Sum_probs=104.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.+..+|||||||+|..+..+++.+|..+++++|+ +.+++.|+.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~------------------------------------ 242 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ------------------------------------ 242 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------------------------------
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh------------------------------------
Confidence 4568999999999999999999999889999999 777655432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++.|...|+.+ +.|.+ |+|++..++|+ |++++...+|++++++|+|||.++
T Consensus 243 -------------------~~~v~~~~~D~~~--~~p~~--D~v~~~~vlh~----~~d~~~~~~L~~~~~~L~pgG~l~ 295 (364)
T 3p9c_A 243 -------------------FPGVTHVGGDMFK--EVPSG--DTILMKWILHD----WSDQHCATLLKNCYDALPAHGKVV 295 (364)
T ss_dssp -------------------CTTEEEEECCTTT--CCCCC--SEEEEESCGGG----SCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred -------------------cCCeEEEeCCcCC--CCCCC--CEEEehHHhcc----CCHHHHHHHHHHHHHHcCCCCEEE
Confidence 1358999999876 34433 99999999863 456788899999999999999999
Q ss_pred EeeCCCchhh------hhhhhhhh-hh-ccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYE------KNRRVSET-TA-TNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~------~~~~~~~~-~~-~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+....+.... ........ .. ........+.+++.+ +++++||+.+++...
T Consensus 296 i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~~~-ll~~AGF~~v~~~~~ 353 (364)
T 3p9c_A 296 LVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREFQA-LARGAGFTGVKSTYI 353 (364)
T ss_dssp EEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHHHH-HHHHTTCCEEEEEEE
T ss_pred EEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHHHH-HHHHCCCceEEEEEc
Confidence 9654321110 00011111 11 112233345566766 899999999988765
No 114
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.48 E-value=5.6e-13 Score=116.80 Aligned_cols=134 Identities=14% Similarity=0.092 Sum_probs=92.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|..+..++...+..+|+|+|+|+.+++.+....+.
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~-------------------------------- 103 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRE-------------------------------- 103 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhc--------------------------------
Confidence 578899999999999999999887655899999999988776654332
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccC---CCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHG---RDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
. .++.+...|..+. .+. .++||+|+|.. . ..+....++.++.++|+|||
T Consensus 104 ----------------~---~~v~~~~~d~~~~~~~~~~-~~~fD~V~~~~-~-------~~~~~~~~l~~~~r~LkpgG 155 (210)
T 1nt2_A 104 ----------------R---NNIIPLLFDASKPWKYSGI-VEKVDLIYQDI-A-------QKNQIEILKANAEFFLKEKG 155 (210)
T ss_dssp ----------------C---SSEEEECSCTTCGGGTTTT-CCCEEEEEECC-C-------STTHHHHHHHHHHHHEEEEE
T ss_pred ----------------C---CCeEEEEcCCCCchhhccc-ccceeEEEEec-c-------ChhHHHHHHHHHHHHhCCCC
Confidence 1 1366666776542 122 37899999862 1 11344566899999999999
Q ss_pred EEEEeeCCCchhhhhhhhhhhhhccccccccCchhHH-HH--HHHHcCCeeeEeccC
Q 047406 218 IFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQ-EI--LLDKIGFRTVEDIGS 271 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--ll~~~Gf~~v~~~~~ 271 (290)
+|++.... . .......+++.. +. .++++ |++++....
T Consensus 156 ~l~i~~~~-------~---------~~~~~~~~~~~~~~~~~~l~~~-f~~~~~~~~ 195 (210)
T 1nt2_A 156 EVVIMVKA-------R---------SIDSTAEPEEVFKSVLKEMEGD-FKIVKHGSL 195 (210)
T ss_dssp EEEEEEEH-------H---------HHCTTSCHHHHHHHHHHHHHTT-SEEEEEEEC
T ss_pred EEEEEEec-------C---------CccccCCHHHHHHHHHHHHHhh-cEEeeeecC
Confidence 99996321 0 001112334432 11 37788 999988776
No 115
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.48 E-value=3.4e-13 Score=115.40 Aligned_cols=111 Identities=15% Similarity=0.190 Sum_probs=87.7
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchh
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKN 137 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (290)
....++.+|||+|||+|..+..++.. ...+|+|+|+|+.+++.|+.++...
T Consensus 19 ~~~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~---------------------------- 69 (209)
T 2p8j_A 19 NESNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSREN---------------------------- 69 (209)
T ss_dssp HHSSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHH----------------------------
T ss_pred hccCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhc----------------------------
Confidence 34467899999999999985554444 3459999999999999999876541
Q ss_pred hhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 138 VTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
+ .++.+.+.|+.+ .+.+.++||+|+|..+++|+. .++...++.++.++|+|||
T Consensus 70 --------------------~--~~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~~~----~~~~~~~l~~~~~~LkpgG 122 (209)
T 2p8j_A 70 --------------------N--FKLNISKGDIRK-LPFKDESMSFVYSYGTIFHMR----KNDVKEAIDEIKRVLKPGG 122 (209)
T ss_dssp --------------------T--CCCCEEECCTTS-CCSCTTCEEEEEECSCGGGSC----HHHHHHHHHHHHHHEEEEE
T ss_pred --------------------C--CceEEEECchhh-CCCCCCceeEEEEcChHHhCC----HHHHHHHHHHHHHHcCCCc
Confidence 1 247788888866 455678999999999886552 4678999999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
.+++...
T Consensus 123 ~l~~~~~ 129 (209)
T 2p8j_A 123 LACINFL 129 (209)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9999653
No 116
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.47 E-value=2e-13 Score=116.17 Aligned_cols=109 Identities=15% Similarity=0.163 Sum_probs=87.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+.++..
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 89 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-GAASVLFVESDQRSAAVIARNIEA-------------------------------- 89 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCSEEEEEECCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 57899999999999999987764 556899999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC-CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHh--hcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD-SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWK--LLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~--~LkpgG 217 (290)
.++ .++.+.+.|+.+..+ .+.++||+|++....++. .+....++..+.+ +|+|||
T Consensus 90 ----------------~~~-~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~-----~~~~~~~l~~~~~~~~L~pgG 147 (189)
T 3p9n_A 90 ----------------LGL-SGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVD-----SADVDAILAALGTNGWTREGT 147 (189)
T ss_dssp ----------------HTC-SCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSC-----HHHHHHHHHHHHHSSSCCTTC
T ss_pred ----------------cCC-CceEEEEccHHHHHhhccCCCccEEEECCCCCcc-----hhhHHHHHHHHHhcCccCCCe
Confidence 233 468899999876321 235789999998765432 2567899999999 999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
+++++..
T Consensus 148 ~l~~~~~ 154 (189)
T 3p9n_A 148 VAVVERA 154 (189)
T ss_dssp EEEEEEE
T ss_pred EEEEEec
Confidence 9999754
No 117
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.47 E-value=2.1e-13 Score=118.25 Aligned_cols=112 Identities=14% Similarity=0.137 Sum_probs=79.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++.+|..+|+|+|+|+.+++.+.+..+...
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~------------------------------ 75 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKP------------------------------ 75 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCG------------------------------
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhh------------------------------
Confidence 47889999999999999999999888899999999998886544322100
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEc---hhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCL---SVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~---~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
...+ ..++.+.+.|+.+ ++.+.+. |.|++. ..++.-|+ .+...++.++.++|+|||
T Consensus 76 --------------~~~~-~~~v~~~~~d~~~-l~~~~~~-d~v~~~~~~~~~~~~~~----~~~~~~l~~~~~~LkpgG 134 (218)
T 3mq2_A 76 --------------AKGG-LPNLLYLWATAER-LPPLSGV-GELHVLMPWGSLLRGVL----GSSPEMLRGMAAVCRPGA 134 (218)
T ss_dssp --------------GGTC-CTTEEEEECCSTT-CCSCCCE-EEEEEESCCHHHHHHHH----TSSSHHHHHHHHTEEEEE
T ss_pred --------------hhcC-CCceEEEecchhh-CCCCCCC-CEEEEEccchhhhhhhh----ccHHHHHHHHHHHcCCCc
Confidence 0012 2358999999877 4555444 666632 22210011 233789999999999999
Q ss_pred EEEEee
Q 047406 218 IFVLEP 223 (290)
Q Consensus 218 ~l~i~~ 223 (290)
.+++..
T Consensus 135 ~l~~~~ 140 (218)
T 3mq2_A 135 SFLVAL 140 (218)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999954
No 118
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.46 E-value=3.3e-13 Score=123.04 Aligned_cols=107 Identities=13% Similarity=0.051 Sum_probs=85.6
Q ss_pred CCcEEEecCCC---ChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 63 GKDCLDIGCNS---GIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 63 ~~~vLDiGcG~---G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..+|||||||+ |.++..+++..+..+|+++|+|+.+++.|++.+..
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~------------------------------- 126 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK------------------------------- 126 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-------------------------------
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-------------------------------
Confidence 47999999999 98877777777778999999999999999886421
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCC----------CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHH
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR----------DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRI 209 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~----------~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~ 209 (290)
..++.+.+.|+.+.. ..+..+||+|++..++||+. ++....++.++
T Consensus 127 --------------------~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~----d~~~~~~l~~~ 182 (274)
T 2qe6_A 127 --------------------DPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLS----PDVVDRVVGAY 182 (274)
T ss_dssp --------------------CTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSC----TTTHHHHHHHH
T ss_pred --------------------CCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCC----cHHHHHHHHHH
Confidence 135888899886410 01224899999999998774 34688999999
Q ss_pred HhhcCCCcEEEEeeC
Q 047406 210 WKLLRPGGIFVLEPQ 224 (290)
Q Consensus 210 ~~~LkpgG~l~i~~~ 224 (290)
.++|+|||+|++...
T Consensus 183 ~~~L~pGG~l~i~~~ 197 (274)
T 2qe6_A 183 RDALAPGSYLFMTSL 197 (274)
T ss_dssp HHHSCTTCEEEEEEE
T ss_pred HHhCCCCcEEEEEEe
Confidence 999999999999764
No 119
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.46 E-value=2.2e-13 Score=120.41 Aligned_cols=109 Identities=18% Similarity=0.198 Sum_probs=90.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|..+..++...+..+|+++|+|+.+++.|++++..
T Consensus 70 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 117 (232)
T 3ntv_A 70 NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLAT-------------------------------- 117 (232)
T ss_dssp HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 578999999999999999999976778999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC-CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD-SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++.+++.+...|+.+.++ ...++||+|++.... .....++..+.++|+|||++
T Consensus 118 ----------------~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~---------~~~~~~l~~~~~~LkpgG~l 172 (232)
T 3ntv_A 118 ----------------YHFENQVRIIEGNALEQFENVNDKVYDMIFIDAAK---------AQSKKFFEIYTPLLKHQGLV 172 (232)
T ss_dssp ----------------TTCTTTEEEEESCGGGCHHHHTTSCEEEEEEETTS---------SSHHHHHHHHGGGEEEEEEE
T ss_pred ----------------cCCCCcEEEEECCHHHHHHhhccCCccEEEEcCcH---------HHHHHHHHHHHHhcCCCeEE
Confidence 3444579999999877544 335789999975432 45678999999999999999
Q ss_pred EEeeCCC
Q 047406 220 VLEPQPW 226 (290)
Q Consensus 220 ~i~~~~~ 226 (290)
++....|
T Consensus 173 v~d~~~~ 179 (232)
T 3ntv_A 173 ITDNVLY 179 (232)
T ss_dssp EEECTTG
T ss_pred EEeeCCc
Confidence 9965544
No 120
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.46 E-value=4.5e-13 Score=124.41 Aligned_cols=104 Identities=10% Similarity=0.083 Sum_probs=85.3
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
.+.++.+|||||||+|.++..++.+.+..+|+|+|+|+.+++.|++++..
T Consensus 119 ~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~------------------------------ 168 (298)
T 3fpf_A 119 RFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEG------------------------------ 168 (298)
T ss_dssp TCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHH------------------------------
T ss_pred CCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHh------------------------------
Confidence 45789999999999997765544445567999999999999999998765
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.++ .++.|.++|..+ + ++++||+|++.... ++...++.++.+.|+|||+
T Consensus 169 ------------------~gl-~~v~~v~gDa~~-l--~d~~FDvV~~~a~~---------~d~~~~l~el~r~LkPGG~ 217 (298)
T 3fpf_A 169 ------------------LGV-DGVNVITGDETV-I--DGLEFDVLMVAALA---------EPKRRVFRNIHRYVDTETR 217 (298)
T ss_dssp ------------------HTC-CSEEEEESCGGG-G--GGCCCSEEEECTTC---------SCHHHHHHHHHHHCCTTCE
T ss_pred ------------------cCC-CCeEEEECchhh-C--CCCCcCEEEECCCc---------cCHHHHHHHHHHHcCCCcE
Confidence 334 579999999877 3 36889999985442 5678999999999999999
Q ss_pred EEEee
Q 047406 219 FVLEP 223 (290)
Q Consensus 219 l~i~~ 223 (290)
|++..
T Consensus 218 Lvv~~ 222 (298)
T 3fpf_A 218 IIYRT 222 (298)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99964
No 121
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.45 E-value=7.5e-13 Score=110.95 Aligned_cols=107 Identities=21% Similarity=0.306 Sum_probs=87.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+++++|+|+.+++.++.++..
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~-------------------------------- 96 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKL-------------------------------- 96 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 37789999999999999998887 56999999999999999988765
Q ss_pred HHHHHHhhhcCCCccccCcCc-ceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNLFD-IVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++.. .+.+...|+.+. .+.++||+|++...++| +.+....++.++.++|+|||.+
T Consensus 97 ----------------~~~~~~~~~~~~~d~~~~--~~~~~~D~v~~~~~~~~-----~~~~~~~~l~~~~~~L~~gG~l 153 (194)
T 1dus_A 97 ----------------NNLDNYDIRVVHSDLYEN--VKDRKYNKIITNPPIRA-----GKEVLHRIIEEGKELLKDNGEI 153 (194)
T ss_dssp ----------------TTCTTSCEEEEECSTTTT--CTTSCEEEEEECCCSTT-----CHHHHHHHHHHHHHHEEEEEEE
T ss_pred ----------------cCCCccceEEEECchhcc--cccCCceEEEECCCccc-----chhHHHHHHHHHHHHcCCCCEE
Confidence 22222 388899998763 23578999999877643 2356789999999999999999
Q ss_pred EEeeC
Q 047406 220 VLEPQ 224 (290)
Q Consensus 220 ~i~~~ 224 (290)
++...
T Consensus 154 ~~~~~ 158 (194)
T 1dus_A 154 WVVIQ 158 (194)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99754
No 122
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=6.6e-13 Score=119.76 Aligned_cols=119 Identities=8% Similarity=0.055 Sum_probs=87.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++++.+..+|+|+|+++.+++.|+.++....
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~------------------------------ 84 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPD------------------------------ 84 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGG------------------------------
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhh------------------------------
Confidence 46789999999999999999999877899999999999999998753200
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCC------CCCCCceeEEEEchhhhhh------------hhcCCchHH
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR------DSPEKYYDAILCLSVTKWI------------HLNWGDDGL 202 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~------~~~~~~fD~I~~~~vl~~~------------~l~~~~~~~ 202 (290)
..++.+++.+.+.|+.+.. ..+.++||+|+|+....+. ........+
T Consensus 85 ---------------~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~ 149 (260)
T 2ozv_A 85 ---------------NAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLF 149 (260)
T ss_dssp ---------------GTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC---------------------CCH
T ss_pred ---------------hCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCH
Confidence 0233446889999987631 2345789999997332111 001122347
Q ss_pred HHHHHHHHhhcCCCcEEEEeeC
Q 047406 203 ITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 203 ~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
..++..+.++|+|||.+++..+
T Consensus 150 ~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 150 EDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHcCCCCEEEEEEc
Confidence 8899999999999999999765
No 123
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.45 E-value=2.1e-13 Score=120.27 Aligned_cols=114 Identities=17% Similarity=0.215 Sum_probs=87.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||||||+|.++..+|+..+...|+|+|+|+.+++.|+.++..
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~--------------------------------- 80 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHE--------------------------------- 80 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHH---------------------------------
Confidence 67899999999999999999998888999999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCC--CCCCceeEEEEchhhhhhhhcCCc--hHHHHHHHHHHhhcCCCc
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--SPEKYYDAILCLSVTKWIHLNWGD--DGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~fD~I~~~~vl~~~~l~~~~--~~~~~~l~~~~~~LkpgG 217 (290)
.++. ++.+.+.|..+.++ .++++||.|++.+...|....... -....++..+.++|+|||
T Consensus 81 ---------------~~l~-nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG 144 (218)
T 3dxy_A 81 ---------------EGLS-NLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGG 144 (218)
T ss_dssp ---------------TTCS-SEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEE
T ss_pred ---------------hCCC-cEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCc
Confidence 2332 48899999766322 456899999997554433210000 001258999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
++++.+.
T Consensus 145 ~l~i~td 151 (218)
T 3dxy_A 145 VFHMATD 151 (218)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9999764
No 124
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.44 E-value=8.2e-13 Score=115.38 Aligned_cols=111 Identities=15% Similarity=0.136 Sum_probs=85.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|..+..+++.++ ..+|+++|+|+.+++.|++++..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~------------------------------- 105 (221)
T 3u81_A 57 YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNF------------------------------- 105 (221)
T ss_dssp HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH-------------------------------
Confidence 4778999999999999999998764 56999999999999999998876
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCC-----CceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPE-----KYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~-----~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.++.+++.+...|+.+.++... ++||+|++....++. .....++..+ ++|+
T Consensus 106 -----------------~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~------~~~~~~~~~~-~~Lk 161 (221)
T 3u81_A 106 -----------------AGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRY------LPDTLLLEKC-GLLR 161 (221)
T ss_dssp -----------------HTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGH------HHHHHHHHHT-TCCC
T ss_pred -----------------cCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccc------hHHHHHHHhc-cccC
Confidence 3344468899998755322222 689999997765433 2344667777 9999
Q ss_pred CCcEEEEeeCCC
Q 047406 215 PGGIFVLEPQPW 226 (290)
Q Consensus 215 pgG~l~i~~~~~ 226 (290)
|||++++....|
T Consensus 162 pgG~lv~~~~~~ 173 (221)
T 3u81_A 162 KGTVLLADNVIV 173 (221)
T ss_dssp TTCEEEESCCCC
T ss_pred CCeEEEEeCCCC
Confidence 999999965543
No 125
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.44 E-value=6.6e-13 Score=124.24 Aligned_cols=147 Identities=12% Similarity=0.125 Sum_probs=103.5
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||||||+|..+..+++.+|..+++++|+ +.+++.|+.
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------------------------------- 229 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG----------------------------------- 229 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC-----------------------------------
T ss_pred cccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc-----------------------------------
Confidence 45678999999999999999999988889999999 888765532
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC---C
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP---G 216 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp---g 216 (290)
. .++.+...|+.+. .+ .||+|++.+++|++ .++....+++++.++|+| |
T Consensus 230 -------------------~-~~v~~~~~d~~~~--~p--~~D~v~~~~~lh~~----~d~~~~~~l~~~~~~L~p~~~g 281 (352)
T 1fp2_A 230 -------------------S-NNLTYVGGDMFTS--IP--NADAVLLKYILHNW----TDKDCLRILKKCKEAVTNDGKR 281 (352)
T ss_dssp -------------------B-TTEEEEECCTTTC--CC--CCSEEEEESCGGGS----CHHHHHHHHHHHHHHHSGGGCC
T ss_pred -------------------C-CCcEEEeccccCC--CC--CccEEEeehhhccC----CHHHHHHHHHHHHHhCCCCCCC
Confidence 1 2388999998663 33 39999999999743 456667999999999999 9
Q ss_pred cEEEEeeCCCchhh------hhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 217 GIFVLEPQPWVSYE------KNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 217 G~l~i~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
|.+++....+.... ..................+.+++.+ +++++||+.+++...
T Consensus 282 G~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~t~~e~~~-ll~~aGf~~~~~~~~ 341 (352)
T 1fp2_A 282 GKVTIIDMVIDKKKDENQVTQIKLLMDVNMACLNGKERNEEEWKK-LFIEAGFQHYKISPL 341 (352)
T ss_dssp CEEEEEECEECTTTSCHHHHHHHHHHHHHGGGGTCCCEEHHHHHH-HHHHTTCCEEEEEEE
T ss_pred cEEEEEEeecCCCCCccchhhhHhhccHHHHhccCCCCCHHHHHH-HHHHCCCCeeEEEec
Confidence 99998654321111 0000111100001122345566666 899999999987664
No 126
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.44 E-value=9e-13 Score=110.28 Aligned_cols=105 Identities=19% Similarity=0.288 Sum_probs=84.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||+|||+|.++..+++.. .+|+++|+|+.+++.++.++..
T Consensus 31 ~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~------------------------------- 77 (192)
T 1l3i_A 31 PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQR------------------------------- 77 (192)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 3578899999999999999998875 6999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+...|+.+..+. .+.||+|++..++ .....++..+.++|+|||.+
T Consensus 78 -----------------~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~~~~~---------~~~~~~l~~~~~~l~~gG~l 130 (192)
T 1l3i_A 78 -----------------HGLGDNVTLMEGDAPEALCK-IPDIDIAVVGGSG---------GELQEILRIIKDKLKPGGRI 130 (192)
T ss_dssp -----------------TTCCTTEEEEESCHHHHHTT-SCCEEEEEESCCT---------TCHHHHHHHHHHTEEEEEEE
T ss_pred -----------------cCCCcceEEEecCHHHhccc-CCCCCEEEECCch---------HHHHHHHHHHHHhcCCCcEE
Confidence 23334588888887652221 2589999998765 24578999999999999999
Q ss_pred EEeeC
Q 047406 220 VLEPQ 224 (290)
Q Consensus 220 ~i~~~ 224 (290)
++...
T Consensus 131 ~~~~~ 135 (192)
T 1l3i_A 131 IVTAI 135 (192)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99654
No 127
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.43 E-value=5.9e-13 Score=119.01 Aligned_cols=110 Identities=17% Similarity=0.181 Sum_probs=89.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|..+..+++.++ ..+|+++|+|+.+++.|+.++..
T Consensus 62 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------------------- 110 (248)
T 3tfw_A 62 TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQL------------------------------- 110 (248)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHH-------------------------------
T ss_pred cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 5789999999999999999999887 67999999999999999998775
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC--CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP--EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~--~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
.++..++.+...|+.+.++.. .++||+|++.... .....++.++.++|+|||
T Consensus 111 -----------------~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~~---------~~~~~~l~~~~~~LkpGG 164 (248)
T 3tfw_A 111 -----------------AGVDQRVTLREGPALQSLESLGECPAFDLIFIDADK---------PNNPHYLRWALRYSRPGT 164 (248)
T ss_dssp -----------------TTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSCG---------GGHHHHHHHHHHTCCTTC
T ss_pred -----------------cCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCch---------HHHHHHHHHHHHhcCCCe
Confidence 344556899999986532222 3489999985432 456778999999999999
Q ss_pred EEEEeeCCCc
Q 047406 218 IFVLEPQPWV 227 (290)
Q Consensus 218 ~l~i~~~~~~ 227 (290)
++++....|.
T Consensus 165 ~lv~~~~~~~ 174 (248)
T 3tfw_A 165 LIIGDNVVRD 174 (248)
T ss_dssp EEEEECCSGG
T ss_pred EEEEeCCCcC
Confidence 9999765443
No 128
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.43 E-value=1.4e-13 Score=121.94 Aligned_cols=156 Identities=15% Similarity=0.050 Sum_probs=89.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCC-HHHHHHH---HHHHHHHHHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDID-SNRVADA---YWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis-~~~l~~a---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
.++.+|||||||+|.++..+++..+..+|+|+|+| +.+++.| ++++..
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~---------------------------- 74 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSK---------------------------- 74 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGG----------------------------
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHH----------------------------
Confidence 57889999999999999999987777899999999 6666665 432211
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
.++ .++.+.+.|..+. +.. .+.+|.|+++....+.+.. .......++.++.++|+|
T Consensus 75 --------------------~~~-~~v~~~~~d~~~l-~~~~~d~v~~i~~~~~~~~~~~~-~~~~~~~~l~~~~r~Lkp 131 (225)
T 3p2e_A 75 --------------------GGL-SNVVFVIAAAESL-PFELKNIADSISILFPWGTLLEY-VIKPNRDILSNVADLAKK 131 (225)
T ss_dssp --------------------TCC-SSEEEECCBTTBC-CGGGTTCEEEEEEESCCHHHHHH-HHTTCHHHHHHHHTTEEE
T ss_pred --------------------cCC-CCeEEEEcCHHHh-hhhccCeEEEEEEeCCCcHHhhh-hhcchHHHHHHHHHhcCC
Confidence 222 2588889888663 321 1445555554322111000 001124689999999999
Q ss_pred CcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEec
Q 047406 216 GGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 216 gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
||.+++.......+...... ......+..-.+.++++.+ +++++||+++...
T Consensus 132 GG~l~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~el~~-~l~~aGf~v~~~~ 183 (225)
T 3p2e_A 132 EAHFEFVTTYSDSYEEAEIK-KRGLPLLSKAYFLSEQYKA-ELSNSGFRIDDVK 183 (225)
T ss_dssp EEEEEEEECCCC---------------CCHHHHHSHHHHH-HHHHHTCEEEEEE
T ss_pred CcEEEEEEeccccchhchhh-hcCCCCCChhhcchHHHHH-HHHHcCCCeeeee
Confidence 99999943222221110000 0000001111112223544 7899999987654
No 129
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.43 E-value=1.5e-12 Score=114.49 Aligned_cols=138 Identities=13% Similarity=0.148 Sum_probs=94.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.|+.++..
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-------------------------------- 120 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-------------------------------- 120 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT--------------------------------
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc--------------------------------
Confidence 567899999999999999999987656999999999999999876432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccC---CCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHG---RDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
. .++.+...|+.+. .+.+ +.||+|++. + . .......++.++.++|+|||
T Consensus 121 ----------------~---~~v~~~~~d~~~~~~~~~~~-~~~D~v~~~-----~--~-~~~~~~~~l~~~~~~LkpgG 172 (230)
T 1fbn_A 121 ----------------R---ENIIPILGDANKPQEYANIV-EKVDVIYED-----V--A-QPNQAEILIKNAKWFLKKGG 172 (230)
T ss_dssp ----------------C---TTEEEEECCTTCGGGGTTTS-CCEEEEEEC-----C--C-STTHHHHHHHHHHHHEEEEE
T ss_pred ----------------C---CCeEEEECCCCCcccccccC-ccEEEEEEe-----c--C-ChhHHHHHHHHHHHhCCCCc
Confidence 1 3588888887651 2333 689999942 1 0 12334677999999999999
Q ss_pred EEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 218 IFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++++...+ .+... . .....+..+++ . ++.++||+.++....
T Consensus 173 ~l~i~~~~-~~~~~----~------~~~~~~~~~~l-~-~l~~~Gf~~~~~~~~ 213 (230)
T 1fbn_A 173 YGMIAIKA-RSIDV----T------KDPKEIFKEQK-E-ILEAGGFKIVDEVDI 213 (230)
T ss_dssp EEEEEEEG-GGTCS----S------SCHHHHHHHHH-H-HHHHHTEEEEEEEEC
T ss_pred EEEEEEec-CCCCC----C------CCHHHhhHHHH-H-HHHHCCCEEEEEEcc
Confidence 99995210 00000 0 00001122333 4 678899999887654
No 130
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.43 E-value=2.2e-12 Score=115.88 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=96.6
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.+|.+|||+|||+|..+..+|... +...|+|+|+++.+++.+++.+..
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~------------------------------ 124 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRD------------------------------ 124 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTT------------------------------
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHh------------------------------
Confidence 4799999999999999999999875 456899999999999998775432
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeeccccc--CCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVH--GRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~--~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
..++.....|..+ ..+...+.+|+|++....+ ++...++.++.+.||||
T Consensus 125 ---------------------~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~~~--------~~~~~~l~~~~r~LKpG 175 (233)
T 4df3_A 125 ---------------------RRNIFPILGDARFPEKYRHLVEGVDGLYADVAQP--------EQAAIVVRNARFFLRDG 175 (233)
T ss_dssp ---------------------CTTEEEEESCTTCGGGGTTTCCCEEEEEECCCCT--------THHHHHHHHHHHHEEEE
T ss_pred ---------------------hcCeeEEEEeccCccccccccceEEEEEEeccCC--------hhHHHHHHHHHHhccCC
Confidence 1246666666544 2344567899999754331 45678999999999999
Q ss_pred cEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 217 GIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 217 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
|.+++....... ... ..... .. .+..+ .|+++||+.++.+.-
T Consensus 176 G~lvI~ik~r~~-d~~----~p~~~------~~-~~ev~-~L~~~GF~l~e~i~L 217 (233)
T 4df3_A 176 GYMLMAIKARSI-DVT----TEPSE------VY-KREIK-TLMDGGLEIKDVVHL 217 (233)
T ss_dssp EEEEEEEECCHH-HHH----TCCCH------HH-HHHHH-HHHHTTCCEEEEEEC
T ss_pred CEEEEEEecccC-CCC----CChHH------HH-HHHHH-HHHHCCCEEEEEEcc
Confidence 999996421110 000 00000 00 12223 578899999988765
No 131
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.42 E-value=1.5e-12 Score=114.46 Aligned_cols=140 Identities=15% Similarity=0.135 Sum_probs=97.0
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.+..+...
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~------------------------------ 124 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK------------------------------ 124 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc------------------------------
Confidence 3578899999999999999999986 456999999999998888776544
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccC--CCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHG--RDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
. .++.+...|+.+. ++...++||+|+|... ..+....++.++.++|+||
T Consensus 125 ------------------~---~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~--------~~~~~~~~~~~~~~~Lkpg 175 (233)
T 2ipx_A 125 ------------------R---TNIIPVIEDARHPHKYRMLIAMVDVIFADVA--------QPDQTRIVALNAHTFLRNG 175 (233)
T ss_dssp ------------------C---TTEEEECSCTTCGGGGGGGCCCEEEEEECCC--------CTTHHHHHHHHHHHHEEEE
T ss_pred ------------------c---CCeEEEEcccCChhhhcccCCcEEEEEEcCC--------CccHHHHHHHHHHHHcCCC
Confidence 1 3578888888662 2334578999998543 1234466788999999999
Q ss_pred cEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 217 GIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 217 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
|++++...+. ..... .........+ . .+++++||++++....
T Consensus 176 G~l~i~~~~~-----~~~~~------~~~~~~~~~~-~-~~l~~~Gf~~~~~~~~ 217 (233)
T 2ipx_A 176 GHFVISIKAN-----CIDST------ASAEAVFASE-V-KKMQQENMKPQEQLTL 217 (233)
T ss_dssp EEEEEEEEHH-----HHCSS------SCHHHHHHHH-H-HTTGGGTEEEEEEEEC
T ss_pred eEEEEEEccc-----ccccC------CCHHHHHHHH-H-HHHHHCCCceEEEEec
Confidence 9999964310 00000 0000011122 3 3788999999886554
No 132
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.42 E-value=1e-12 Score=116.47 Aligned_cols=129 Identities=19% Similarity=0.200 Sum_probs=98.6
Q ss_pred ccCCCcEEEecCCCChhhHHHHhH-cCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQK-FNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..++.+|||+|||+|.++..++.. .+..+|+++|+|+.+++.|++++..
T Consensus 91 ~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~------------------------------ 140 (255)
T 3mb5_A 91 ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKW------------------------------ 140 (255)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHH------------------------------
Confidence 357899999999999999999998 5567999999999999999998765
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.++.+.+.+...|+.+. .+.+.||+|++.. .....++.++.++|+|||.
T Consensus 141 ------------------~~~~~~v~~~~~d~~~~--~~~~~~D~v~~~~-----------~~~~~~l~~~~~~L~~gG~ 189 (255)
T 3mb5_A 141 ------------------AGFDDRVTIKLKDIYEG--IEEENVDHVILDL-----------PQPERVVEHAAKALKPGGF 189 (255)
T ss_dssp ------------------HTCTTTEEEECSCGGGC--CCCCSEEEEEECS-----------SCGGGGHHHHHHHEEEEEE
T ss_pred ------------------cCCCCceEEEECchhhc--cCCCCcCEEEECC-----------CCHHHHHHHHHHHcCCCCE
Confidence 23444589999998763 4557899999832 2235678999999999999
Q ss_pred EEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcC--CeeeEeccC
Q 047406 219 FVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIG--FRTVEDIGS 271 (290)
Q Consensus 219 l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G--f~~v~~~~~ 271 (290)
+++..+.+.. ..+..+ .++++| |..++.+..
T Consensus 190 l~~~~~~~~~---------------------~~~~~~-~l~~~g~~f~~~~~~e~ 222 (255)
T 3mb5_A 190 FVAYTPCSNQ---------------------VMRLHE-KLREFKDYFMKPRTINV 222 (255)
T ss_dssp EEEEESSHHH---------------------HHHHHH-HHHHTGGGBSCCEEECC
T ss_pred EEEEECCHHH---------------------HHHHHH-HHHHcCCCccccEEEEE
Confidence 9996542110 122333 678899 987776554
No 133
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.42 E-value=3.7e-13 Score=112.83 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=83.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+.++..
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 76 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIM-------------------------------- 76 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHT--------------------------------
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 57889999999999999998876 556999999999999999998764
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH--hhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW--KLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~--~~LkpgG~ 218 (290)
.++..++.+...|+.+..+...+.||+|++....++ .....++..+. ++|+|||+
T Consensus 77 ----------------~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~-------~~~~~~~~~l~~~~~L~~gG~ 133 (177)
T 2esr_A 77 ----------------TKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAK-------ETIVATIEALAAKNLLSEQVM 133 (177)
T ss_dssp ----------------TTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSHH-------HHHHHHHHHHHHTTCEEEEEE
T ss_pred ----------------cCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCCc-------chHHHHHHHHHhCCCcCCCcE
Confidence 334446888898886632223467999999765421 23456666666 99999999
Q ss_pred EEEeeC
Q 047406 219 FVLEPQ 224 (290)
Q Consensus 219 l~i~~~ 224 (290)
+++...
T Consensus 134 l~~~~~ 139 (177)
T 2esr_A 134 VVCETD 139 (177)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 999764
No 134
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.42 E-value=8.8e-13 Score=111.26 Aligned_cols=125 Identities=17% Similarity=0.129 Sum_probs=91.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++.. +|+|+|+|+.+++. .
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~------~-------------------------------- 60 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES------H-------------------------------- 60 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT------C--------------------------------
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc------c--------------------------------
Confidence 567899999999999999998874 99999999998876 1
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhc---CCchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLN---WGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~---~~~~~~~~~l~~~~~~LkpgG 217 (290)
.++.+.+.|+.+. .+.++||+|+|+...+|..-. .+..+...++.++.+.| |||
T Consensus 61 --------------------~~~~~~~~d~~~~--~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG 117 (170)
T 3q87_B 61 --------------------RGGNLVRADLLCS--INQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVG 117 (170)
T ss_dssp --------------------SSSCEEECSTTTT--BCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSS
T ss_pred --------------------cCCeEEECChhhh--cccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCC
Confidence 1477888998763 344789999998776543210 01223456788888888 999
Q ss_pred EEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 218 IFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
.+++..... ...+++.+ +++++||+.+.+...
T Consensus 118 ~l~~~~~~~---------------------~~~~~l~~-~l~~~gf~~~~~~~~ 149 (170)
T 3q87_B 118 MLYLLVIEA---------------------NRPKEVLA-RLEERGYGTRILKVR 149 (170)
T ss_dssp EEEEEEEGG---------------------GCHHHHHH-HHHHTTCEEEEEEEE
T ss_pred EEEEEEecC---------------------CCHHHHHH-HHHHCCCcEEEEEee
Confidence 999964311 12233444 789999998887665
No 135
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.42 E-value=5.4e-13 Score=117.15 Aligned_cols=110 Identities=18% Similarity=0.260 Sum_probs=89.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|..+..+++.++..+|+++|+|+.+++.|+.++..
T Consensus 53 ~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 100 (233)
T 2gpy_A 53 AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKA-------------------------------- 100 (233)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 578899999999999999999988777999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC--CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP--EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~--~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.++..++.+...|+.+..+.. .++||+|++.... .....++..+.++|+|||+
T Consensus 101 ----------------~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~---------~~~~~~l~~~~~~L~pgG~ 155 (233)
T 2gpy_A 101 ----------------LGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAK---------GQYRRFFDMYSPMVRPGGL 155 (233)
T ss_dssp ----------------TTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGG---------SCHHHHHHHHGGGEEEEEE
T ss_pred ----------------cCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCH---------HHHHHHHHHHHHHcCCCeE
Confidence 333345888888887632322 4689999986654 3567899999999999999
Q ss_pred EEEeeCCCc
Q 047406 219 FVLEPQPWV 227 (290)
Q Consensus 219 l~i~~~~~~ 227 (290)
+++....|.
T Consensus 156 lv~~~~~~~ 164 (233)
T 2gpy_A 156 ILSDNVLFR 164 (233)
T ss_dssp EEEETTTC-
T ss_pred EEEEcCCcC
Confidence 999754443
No 136
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.42 E-value=5e-13 Score=126.08 Aligned_cols=145 Identities=16% Similarity=0.144 Sum_probs=101.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|..+..+++.++..+++++|+ +.+++.|+.
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~------------------------------------ 250 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP------------------------------------ 250 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC------------------------------------
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh------------------------------------
Confidence 4578999999999999999999998888999999 887765432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
..++.+...|+.+ +.+. ||+|++..++|++ .++....+++++.++|+|||.++
T Consensus 251 -------------------~~~v~~~~~d~~~--~~~~--~D~v~~~~~lh~~----~d~~~~~~l~~~~~~L~pgG~l~ 303 (372)
T 1fp1_D 251 -------------------LSGIEHVGGDMFA--SVPQ--GDAMILKAVCHNW----SDEKCIEFLSNCHKALSPNGKVI 303 (372)
T ss_dssp -------------------CTTEEEEECCTTT--CCCC--EEEEEEESSGGGS----CHHHHHHHHHHHHHHEEEEEEEE
T ss_pred -------------------cCCCEEEeCCccc--CCCC--CCEEEEecccccC----CHHHHHHHHHHHHHhcCCCCEEE
Confidence 1248899999876 3332 9999999999744 45566799999999999999999
Q ss_pred EeeCCCch-----hhh-hhhhhhh-hhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 221 LEPQPWVS-----YEK-NRRVSET-TATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 221 i~~~~~~~-----~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+....+.. ... ....... .........+..+++.+ +++++||+++++..
T Consensus 304 i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~~-ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 304 IVEFILPEEPNTSEESKLVSTLDNLMFITVGGRERTEKQYEK-LSKLSGFSKFQVAC 359 (372)
T ss_dssp EEEEEECSSCCSSHHHHHHHHHHHHHHHHHSCCCEEHHHHHH-HHHHTTCSEEEEEE
T ss_pred EEEeccCCCCccchHHHHHHHhhHHHHhccCCccCCHHHHHH-HHHHCCCceEEEEE
Confidence 85321110 000 0011111 00011122345566666 89999999998876
No 137
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.41 E-value=3.7e-13 Score=117.01 Aligned_cols=110 Identities=20% Similarity=0.216 Sum_probs=87.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|..+..++..++ ..+|+++|+|+.+++.|++++..
T Consensus 63 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~------------------------------- 111 (225)
T 3tr6_A 63 MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEK------------------------------- 111 (225)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHH-------------------------------
Confidence 5778999999999999999999876 67999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-----CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-----EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.++...+.+...|..+..+.. .++||+|++... ......++..+.++|+
T Consensus 112 -----------------~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~---------~~~~~~~l~~~~~~L~ 165 (225)
T 3tr6_A 112 -----------------AGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD---------KANTDLYYEESLKLLR 165 (225)
T ss_dssp -----------------TTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC---------GGGHHHHHHHHHHHEE
T ss_pred -----------------CCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC---------HHHHHHHHHHHHHhcC
Confidence 334456888888875532211 168999997543 2456789999999999
Q ss_pred CCcEEEEeeCCCc
Q 047406 215 PGGIFVLEPQPWV 227 (290)
Q Consensus 215 pgG~l~i~~~~~~ 227 (290)
|||++++....|.
T Consensus 166 pgG~lv~~~~~~~ 178 (225)
T 3tr6_A 166 EGGLIAVDNVLRR 178 (225)
T ss_dssp EEEEEEEECSSGG
T ss_pred CCcEEEEeCCCcC
Confidence 9999999765443
No 138
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.41 E-value=6.7e-13 Score=126.89 Aligned_cols=141 Identities=20% Similarity=0.263 Sum_probs=103.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+.++..
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~--------------------------------- 277 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEA--------------------------------- 277 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 6789999999999999999886 45999999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
.++ .+.+...|+.+. ..+.++||+|+|+..+++.. ....+....++.++.++|+|||++++
T Consensus 278 ---------------~~~--~v~~~~~D~~~~-~~~~~~fD~Ii~npp~~~~~-~~~~~~~~~~l~~~~~~LkpGG~l~i 338 (381)
T 3dmg_A 278 ---------------NAL--KAQALHSDVDEA-LTEEARFDIIVTNPPFHVGG-AVILDVAQAFVNVAAARLRPGGVFFL 338 (381)
T ss_dssp ---------------TTC--CCEEEECSTTTT-SCTTCCEEEEEECCCCCTTC-SSCCHHHHHHHHHHHHHEEEEEEEEE
T ss_pred ---------------cCC--CeEEEEcchhhc-cccCCCeEEEEECCchhhcc-cccHHHHHHHHHHHHHhcCcCcEEEE
Confidence 222 278889998774 33357999999988876421 11246778999999999999999999
Q ss_pred eeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 222 EPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+..+...+.. .+...|..+. . + ++.||++++....
T Consensus 339 v~n~~l~~~~------~l~~~f~~v~-------~-l-~~~gF~Vl~a~~~ 373 (381)
T 3dmg_A 339 VSNPFLKYEP------LLEEKFGAFQ-------T-L-KVAEYKVLFAEKR 373 (381)
T ss_dssp EECTTSCHHH------HHHHHHSCCE-------E-E-EESSSEEEEEECC
T ss_pred EEcCCCChHH------HHHHhhccEE-------E-E-eCCCEEEEEEEEe
Confidence 8764433322 1111121110 1 2 5688988877665
No 139
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.41 E-value=1.7e-12 Score=118.17 Aligned_cols=107 Identities=15% Similarity=0.076 Sum_probs=86.0
Q ss_pred hhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 56 LKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 56 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
+...+.++.+|||+|||+|.+++.+|+..+. +|+|+|+|+.+++.|+.++..
T Consensus 119 l~~~~~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~--------------------------- 170 (278)
T 2frn_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHL--------------------------- 170 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHH---------------------------
T ss_pred HHHhCCCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHH---------------------------
Confidence 3444567999999999999999999987544 799999999999999998775
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
+++.+.+.+.+.|+.+... .+.||+|++.... ....++..+.++|+|
T Consensus 171 ---------------------n~~~~~v~~~~~D~~~~~~--~~~fD~Vi~~~p~----------~~~~~l~~~~~~Lkp 217 (278)
T 2frn_A 171 ---------------------NKVEDRMSAYNMDNRDFPG--ENIADRILMGYVV----------RTHEFIPKALSIAKD 217 (278)
T ss_dssp ---------------------TTCTTTEEEECSCTTTCCC--CSCEEEEEECCCS----------SGGGGHHHHHHHEEE
T ss_pred ---------------------cCCCceEEEEECCHHHhcc--cCCccEEEECCch----------hHHHHHHHHHHHCCC
Confidence 4455568899999977432 6789999985332 225678899999999
Q ss_pred CcEEEEee
Q 047406 216 GGIFVLEP 223 (290)
Q Consensus 216 gG~l~i~~ 223 (290)
||++++..
T Consensus 218 gG~l~~~~ 225 (278)
T 2frn_A 218 GAIIHYHN 225 (278)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999953
No 140
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.41 E-value=3.2e-12 Score=119.89 Aligned_cols=116 Identities=20% Similarity=0.087 Sum_probs=88.2
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKN 137 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (290)
.+.++.+|||+|||+|.+++.++... +...|+|+|+|+.+++.|+.++..
T Consensus 200 ~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~----------------------------- 250 (354)
T 3tma_A 200 DARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALA----------------------------- 250 (354)
T ss_dssp TCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHH-----------------------------
T ss_pred CCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHH-----------------------------
Confidence 45678999999999999999999987 567999999999999999999876
Q ss_pred hhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhc--CCchHHHHHHHHHHhhcCC
Q 047406 138 VTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLN--WGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~--~~~~~~~~~l~~~~~~Lkp 215 (290)
.++. .+.+.+.|+.+ ++.+...||+|+|+....+.... ...+....++..+.++|+|
T Consensus 251 -------------------~g~~-~i~~~~~D~~~-~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~Lkp 309 (354)
T 3tma_A 251 -------------------SGLS-WIRFLRADARH-LPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPP 309 (354)
T ss_dssp -------------------TTCT-TCEEEECCGGG-GGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCT
T ss_pred -------------------cCCC-ceEEEeCChhh-CccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCC
Confidence 3343 68999999877 34445679999995432110000 0012236889999999999
Q ss_pred CcEEEEeeC
Q 047406 216 GGIFVLEPQ 224 (290)
Q Consensus 216 gG~l~i~~~ 224 (290)
||.+++..+
T Consensus 310 gG~l~i~t~ 318 (354)
T 3tma_A 310 GGRVALLTL 318 (354)
T ss_dssp TCEEEEEES
T ss_pred CcEEEEEeC
Confidence 999999643
No 141
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.40 E-value=3e-13 Score=118.45 Aligned_cols=107 Identities=15% Similarity=0.091 Sum_probs=86.0
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
.+.+..+|||+|||+|.++..++...|..+|+++|+|+.+++.++.++..
T Consensus 46 ~l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~------------------------------ 95 (200)
T 3fzg_A 46 NIKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGK------------------------------ 95 (200)
T ss_dssp HSCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHH------------------------------
T ss_pred hcCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHh------------------------------
Confidence 35678999999999999999998888888999999999999999998765
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.+...++.+ .|.... .+.++||+|+...++|.+ ++.+..+.++.+.|+|||+
T Consensus 96 ------------------~g~~~~v~~--~d~~~~--~~~~~~DvVLa~k~LHlL------~~~~~al~~v~~~L~pggv 147 (200)
T 3fzg_A 96 ------------------LKTTIKYRF--LNKESD--VYKGTYDVVFLLKMLPVL------KQQDVNILDFLQLFHTQNF 147 (200)
T ss_dssp ------------------SCCSSEEEE--ECCHHH--HTTSEEEEEEEETCHHHH------HHTTCCHHHHHHTCEEEEE
T ss_pred ------------------cCCCccEEE--eccccc--CCCCCcChhhHhhHHHhh------hhhHHHHHHHHHHhCCCCE
Confidence 333334555 455442 356889999999999766 4555666699999999998
Q ss_pred EEEee
Q 047406 219 FVLEP 223 (290)
Q Consensus 219 l~i~~ 223 (290)
++--+
T Consensus 148 fISfp 152 (200)
T 3fzg_A 148 VISFP 152 (200)
T ss_dssp EEEEE
T ss_pred EEEeC
Confidence 88754
No 142
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.40 E-value=6.5e-13 Score=114.82 Aligned_cols=108 Identities=14% Similarity=0.085 Sum_probs=86.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|..+..++...+ ..+|+++|+|+.+++.|++++..
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~------------------------------- 103 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHD------------------------------- 103 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 4678999999999999999998876 67999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++...+.+...|..+..+...+ ||+|++... ......++.++.++|+|||++
T Consensus 104 -----------------~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~---------~~~~~~~l~~~~~~LkpgG~l 156 (210)
T 3c3p_A 104 -----------------NGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD---------VFNGADVLERMNRCLAKNALL 156 (210)
T ss_dssp -----------------HSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT---------TSCHHHHHHHHGGGEEEEEEE
T ss_pred -----------------CCCCceEEEEEecHHHHhccCCC-CCEEEEcCC---------hhhhHHHHHHHHHhcCCCeEE
Confidence 23334588998888663343345 999998633 245678999999999999999
Q ss_pred EEeeCCC
Q 047406 220 VLEPQPW 226 (290)
Q Consensus 220 ~i~~~~~ 226 (290)
++....|
T Consensus 157 v~~~~~~ 163 (210)
T 3c3p_A 157 IAVNALR 163 (210)
T ss_dssp EEESSSS
T ss_pred EEECccc
Confidence 9965544
No 143
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.40 E-value=7.7e-13 Score=115.04 Aligned_cols=110 Identities=18% Similarity=0.208 Sum_probs=88.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|..+..+++.++ ..+|+++|+++.+++.|+.++..
T Consensus 57 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~------------------------------- 105 (223)
T 3duw_A 57 QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIER------------------------------- 105 (223)
T ss_dssp HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 5789999999999999999999877 57999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCC---C-CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS---P-EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~-~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
.++..++.+...|..+.++. . .++||+|++.... .....++..+.++|+|
T Consensus 106 -----------------~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~---------~~~~~~l~~~~~~L~p 159 (223)
T 3duw_A 106 -----------------ANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADK---------QNNPAYFEWALKLSRP 159 (223)
T ss_dssp -----------------TTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCG---------GGHHHHHHHHHHTCCT
T ss_pred -----------------cCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCc---------HHHHHHHHHHHHhcCC
Confidence 34445688999888653211 1 2579999986543 4557889999999999
Q ss_pred CcEEEEeeCCCc
Q 047406 216 GGIFVLEPQPWV 227 (290)
Q Consensus 216 gG~l~i~~~~~~ 227 (290)
||++++....|.
T Consensus 160 gG~lv~~~~~~~ 171 (223)
T 3duw_A 160 GTVIIGDNVVRE 171 (223)
T ss_dssp TCEEEEESCSGG
T ss_pred CcEEEEeCCCcC
Confidence 999999765443
No 144
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.40 E-value=6.5e-13 Score=118.13 Aligned_cols=140 Identities=14% Similarity=0.107 Sum_probs=87.1
Q ss_pred CCCcEEEecCCCChhhHHHHhH--cCCceEEEEeCCHHHHHHHHHHHHHH---HHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 62 EGKDCLDIGCNSGIITIQIAQK--FNCRSILGIDIDSNRVADAYWHLRKI---VRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~--~~~~~i~g~Dis~~~l~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
++.+|||+|||+|.+++.+++. .+..+|+|+|+|+.+++.|+.++... +..... ......+.. .+.....
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~ 125 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARE-LERREQSER----FGKPSYL 125 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHH-HHHHHHHHH----HCCHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccc-hhhhhhhhh----cccccch
Confidence 5679999999999999999887 56678999999999999999887653 110000 000000000 0000000
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCccee-------------EeecccccCCCC----CCCceeEEEEchhhhhhhhcC--
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVS-------------FKQENFVHGRDS----PEKYYDAILCLSVTKWIHLNW-- 197 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~-------------~~~~d~~~~~~~----~~~~fD~I~~~~vl~~~~l~~-- 197 (290)
.. ......+. +.+.|+.+..+. ...+||+|+|+....... .|
T Consensus 126 ~~------------------~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~-~~~~ 186 (250)
T 1o9g_A 126 EA------------------AQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERT-HWEG 186 (250)
T ss_dssp HH------------------HHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSS-SSSS
T ss_pred hh------------------hhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccc-cccc
Confidence 00 00001133 888888763211 234899999986653221 11
Q ss_pred --CchHHHHHHHHHHhhcCCCcEEEEeeCC
Q 047406 198 --GDDGLITLFMRIWKLLRPGGIFVLEPQP 225 (290)
Q Consensus 198 --~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (290)
+.+....++.++.++|+|||++++....
T Consensus 187 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 187 QVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred cccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 1356689999999999999999996543
No 145
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.40 E-value=3.4e-12 Score=106.15 Aligned_cols=99 Identities=16% Similarity=0.187 Sum_probs=80.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++ +..+++|+|+|+.+++.|+.++..
T Consensus 34 ~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 79 (183)
T 2yxd_A 34 NKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAK-------------------------------- 79 (183)
T ss_dssp CTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHH--------------------------------
Confidence 4678999999999999999888 567999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++ .++.+...|+.+ +.+.+.||+|+|..+ .....++..+.++ |||.++
T Consensus 80 ----------------~~~-~~~~~~~~d~~~--~~~~~~~D~i~~~~~----------~~~~~~l~~~~~~--~gG~l~ 128 (183)
T 2yxd_A 80 ----------------FNI-KNCQIIKGRAED--VLDKLEFNKAFIGGT----------KNIEKIIEILDKK--KINHIV 128 (183)
T ss_dssp ----------------TTC-CSEEEEESCHHH--HGGGCCCSEEEECSC----------SCHHHHHHHHHHT--TCCEEE
T ss_pred ----------------cCC-CcEEEEECCccc--cccCCCCcEEEECCc----------ccHHHHHHHHhhC--CCCEEE
Confidence 223 358889999876 233468999999766 2456788888888 999999
Q ss_pred EeeC
Q 047406 221 LEPQ 224 (290)
Q Consensus 221 i~~~ 224 (290)
+...
T Consensus 129 ~~~~ 132 (183)
T 2yxd_A 129 ANTI 132 (183)
T ss_dssp EEES
T ss_pred EEec
Confidence 9754
No 146
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.40 E-value=6.6e-13 Score=117.32 Aligned_cols=106 Identities=20% Similarity=0.249 Sum_probs=85.5
Q ss_pred CcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQ 142 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (290)
.+|||||||+|..+..+++.++ ..+|+++|+|+.+++.|++++..
T Consensus 58 ~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~---------------------------------- 103 (221)
T 3dr5_A 58 TGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFRE---------------------------------- 103 (221)
T ss_dssp CEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHH----------------------------------
T ss_pred CCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH----------------------------------
Confidence 3999999999999999999765 56999999999999999998876
Q ss_pred HHHHhhhcCCCccccCcC-cceeEeecccccCCCC-CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 143 EEKKAISRNCSPAERNLF-DIVSFKQENFVHGRDS-PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~-~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++. .++.+..+|..+.++. +.++||+|++.... .....++..+.++|+|||+++
T Consensus 104 --------------~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~~---------~~~~~~l~~~~~~LkpGG~lv 160 (221)
T 3dr5_A 104 --------------AGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVSP---------MDLKALVDAAWPLLRRGGALV 160 (221)
T ss_dssp --------------TTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCCT---------TTHHHHHHHHHHHEEEEEEEE
T ss_pred --------------cCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCcH---------HHHHHHHHHHHHHcCCCcEEE
Confidence 3444 5699999987664332 25789999975432 455678999999999999999
Q ss_pred EeeCCC
Q 047406 221 LEPQPW 226 (290)
Q Consensus 221 i~~~~~ 226 (290)
+....|
T Consensus 161 ~dn~~~ 166 (221)
T 3dr5_A 161 LADALL 166 (221)
T ss_dssp ETTTTG
T ss_pred EeCCCC
Confidence 965444
No 147
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.40 E-value=1.9e-12 Score=123.40 Aligned_cols=113 Identities=19% Similarity=0.267 Sum_probs=88.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..+++.+|..+|+++|+|+.+++.|+.++...
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n-------------------------------- 269 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN-------------------------------- 269 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc--------------------------------
Confidence 458999999999999999999988889999999999999999988762
Q ss_pred HHHHHhhhcCCCccccCcC--cceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 142 QEEKKAISRNCSPAERNLF--DIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~--~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
++. ..+.|...|+.+. .+.++||+|+|+..+++.. .........++.++.++|+|||++
T Consensus 270 ----------------gl~~~~~v~~~~~D~~~~--~~~~~fD~Ii~nppfh~~~-~~~~~~~~~~l~~~~~~LkpgG~l 330 (375)
T 4dcm_A 270 ----------------MPEALDRCEFMINNALSG--VEPFRFNAVLCNPPFHQQH-ALTDNVAWEMFHHARRCLKINGEL 330 (375)
T ss_dssp ----------------CGGGGGGEEEEECSTTTT--CCTTCEEEEEECCCC--------CCHHHHHHHHHHHHEEEEEEE
T ss_pred ----------------CCCcCceEEEEechhhcc--CCCCCeeEEEECCCcccCc-ccCHHHHHHHHHHHHHhCCCCcEE
Confidence 221 2478899998773 3557899999988775321 112345568999999999999999
Q ss_pred EEeeCC
Q 047406 220 VLEPQP 225 (290)
Q Consensus 220 ~i~~~~ 225 (290)
++....
T Consensus 331 ~iv~n~ 336 (375)
T 4dcm_A 331 YIVANR 336 (375)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 997543
No 148
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.39 E-value=2.7e-13 Score=120.60 Aligned_cols=113 Identities=17% Similarity=0.105 Sum_probs=76.9
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..++...+..+|+|+|+|+.+++.|+.++..
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~--------------------------------- 111 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQ--------------------------------- 111 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 57799999999999999999887667999999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccC-C-CCC---CCceeEEEEchhhhhhhhcCC---------chHHHHHHH
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHG-R-DSP---EKYYDAILCLSVTKWIHLNWG---------DDGLITLFM 207 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~-~-~~~---~~~fD~I~~~~vl~~~~l~~~---------~~~~~~~l~ 207 (290)
.++..++.+.+.|..+. . +.+ +++||+|+|....++....+. ......++.
T Consensus 112 ---------------~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~ 176 (254)
T 2h00_A 112 ---------------NNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTG 176 (254)
T ss_dssp ---------------TTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-------------------------
T ss_pred ---------------cCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhh
Confidence 33444588998886541 1 222 258999999755432210000 011235677
Q ss_pred HHHhhcCCCcEEEEe
Q 047406 208 RIWKLLRPGGIFVLE 222 (290)
Q Consensus 208 ~~~~~LkpgG~l~i~ 222 (290)
.+.++|+|||.+.+.
T Consensus 177 ~~~~~LkpgG~l~~~ 191 (254)
T 2h00_A 177 GITEIMAEGGELEFV 191 (254)
T ss_dssp CTTTTHHHHTHHHHH
T ss_pred hHHHHEecCCEEEEE
Confidence 888999999988774
No 149
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.38 E-value=1.5e-12 Score=122.55 Aligned_cols=109 Identities=22% Similarity=0.298 Sum_probs=88.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|++++..
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~-~l~~a~~~~~~------------------------------- 110 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSS-ISDYAVKIVKA------------------------------- 110 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHH-------------------------------
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHH-HHHHHHHHHHH-------------------------------
Confidence 468899999999999999998886 556999999995 99999988765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++.+.+.+...|+.+ .+.+.++||+|+|..+..+++ ....+..++..+.++|+|||++
T Consensus 111 -----------------~~~~~~v~~~~~d~~~-~~~~~~~fD~Iis~~~~~~l~---~~~~~~~~l~~~~r~LkpgG~l 169 (349)
T 3q7e_A 111 -----------------NKLDHVVTIIKGKVEE-VELPVEKVDIIISEWMGYCLF---YESMLNTVLHARDKWLAPDGLI 169 (349)
T ss_dssp -----------------TTCTTTEEEEESCTTT-CCCSSSCEEEEEECCCBBTBT---BTCCHHHHHHHHHHHEEEEEEE
T ss_pred -----------------cCCCCcEEEEECcHHH-ccCCCCceEEEEEcccccccc---CchhHHHHHHHHHHhCCCCCEE
Confidence 4455569999999977 456678999999976543222 2356788999999999999999
Q ss_pred EEe
Q 047406 220 VLE 222 (290)
Q Consensus 220 ~i~ 222 (290)
+..
T Consensus 170 i~~ 172 (349)
T 3q7e_A 170 FPD 172 (349)
T ss_dssp ESC
T ss_pred ccc
Confidence 863
No 150
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.38 E-value=3.7e-12 Score=115.02 Aligned_cols=128 Identities=22% Similarity=0.238 Sum_probs=97.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhH-cCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQK-FNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~-~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|.++..++.. .+..+|+++|+|+.+++.|+.++..
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------------------- 159 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTK------------------------------- 159 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 56789999999999999999988 4467999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+...|+.+. .+.+.||+|++.. .....++.++.++|+|||.+
T Consensus 160 -----------------~~~~~~v~~~~~d~~~~--~~~~~~D~V~~~~-----------~~~~~~l~~~~~~L~pgG~l 209 (277)
T 1o54_A 160 -----------------WGLIERVTIKVRDISEG--FDEKDVDALFLDV-----------PDPWNYIDKCWEALKGGGRF 209 (277)
T ss_dssp -----------------TTCGGGEEEECCCGGGC--CSCCSEEEEEECC-----------SCGGGTHHHHHHHEEEEEEE
T ss_pred -----------------cCCCCCEEEEECCHHHc--ccCCccCEEEECC-----------cCHHHHHHHHHHHcCCCCEE
Confidence 23334688889998764 3446899999832 23357789999999999999
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++..+... ...++.+ .+++.||..++.+..
T Consensus 210 ~~~~~~~~---------------------~~~~~~~-~l~~~gf~~~~~~~~ 239 (277)
T 1o54_A 210 ATVCPTTN---------------------QVQETLK-KLQELPFIRIEVWES 239 (277)
T ss_dssp EEEESSHH---------------------HHHHHHH-HHHHSSEEEEEEECC
T ss_pred EEEeCCHH---------------------HHHHHHH-HHHHCCCceeEEEEE
Confidence 99764210 0123333 567799998877654
No 151
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.37 E-value=1.7e-12 Score=115.86 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=85.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+|+.++...|+|+|+|+.+++.|+.++......
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~---------------------------- 96 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAA---------------------------- 96 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHS----------------------------
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHH----------------------------
Confidence 4567899999999999999999888889999999999999999876541100
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC--CCCCceeEEEEchhhhhhhhcCCch--HHHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--SPEKYYDAILCLSVTKWIHLNWGDD--GLITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~fD~I~~~~vl~~~~l~~~~~--~~~~~l~~~~~~Lkpg 216 (290)
......++.+.+.|+.+.++ .+.+.||.|++.....|........ ....++.++.++|+||
T Consensus 97 ---------------~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpG 161 (235)
T 3ckk_A 97 ---------------PAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVG 161 (235)
T ss_dssp ---------------TTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEE
T ss_pred ---------------HhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCC
Confidence 01112358999999876433 4568899999865544431000000 0147899999999999
Q ss_pred cEEEEeeC
Q 047406 217 GIFVLEPQ 224 (290)
Q Consensus 217 G~l~i~~~ 224 (290)
|.|++...
T Consensus 162 G~l~~~td 169 (235)
T 3ckk_A 162 GLVYTITD 169 (235)
T ss_dssp EEEEEEES
T ss_pred CEEEEEeC
Confidence 99999754
No 152
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.37 E-value=2e-12 Score=116.97 Aligned_cols=127 Identities=16% Similarity=0.218 Sum_probs=96.1
Q ss_pred ccCCCcEEEecCCCChhhHHHHhH-cCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQK-FNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.++.+|||+|||+|.++..+++. .+..+|+++|+|+.+++.|+.++..
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~------------------------------ 157 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSE------------------------------ 157 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHT------------------------------
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHh------------------------------
Confidence 357789999999999999999987 4567999999999999999987654
Q ss_pred hhHHHHHHhhhcCCCcccc-CcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 139 TAAQEEKKAISRNCSPAER-NLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
. + ..++.+...|+.+ +.+.++||+|++.. ++...++.++.++|+|||
T Consensus 158 ------------------~~g-~~~v~~~~~d~~~--~~~~~~fD~Vi~~~-----------~~~~~~l~~~~~~LkpgG 205 (275)
T 1yb2_A 158 ------------------FYD-IGNVRTSRSDIAD--FISDQMYDAVIADI-----------PDPWNHVQKIASMMKPGS 205 (275)
T ss_dssp ------------------TSC-CTTEEEECSCTTT--CCCSCCEEEEEECC-----------SCGGGSHHHHHHTEEEEE
T ss_pred ------------------cCC-CCcEEEEECchhc--cCcCCCccEEEEcC-----------cCHHHHHHHHHHHcCCCC
Confidence 1 2 2358899999876 33457899999821 233578999999999999
Q ss_pred EEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 218 IFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
++++..++.. ....+.+ .+.++||..++.+.
T Consensus 206 ~l~i~~~~~~---------------------~~~~~~~-~l~~~Gf~~~~~~~ 236 (275)
T 1yb2_A 206 VATFYLPNFD---------------------QSEKTVL-SLSASGMHHLETVE 236 (275)
T ss_dssp EEEEEESSHH---------------------HHHHHHH-HSGGGTEEEEEEEE
T ss_pred EEEEEeCCHH---------------------HHHHHHH-HHHHCCCeEEEEEE
Confidence 9999765211 0122333 56789998887754
No 153
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.37 E-value=1.6e-12 Score=116.05 Aligned_cols=107 Identities=15% Similarity=0.169 Sum_probs=83.0
Q ss_pred hhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 56 LKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 56 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
+...+.++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.|+.+..
T Consensus 48 l~~~~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~---------------------------- 97 (260)
T 2avn_A 48 LEEYLKNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGV---------------------------- 97 (260)
T ss_dssp HHHHCCSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTC----------------------------
T ss_pred HHHhcCCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcC----------------------------
Confidence 3344457899999999999999998886 4589999999999999876411
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
. .+...|+.+ ++.+.++||+|+|..++.++ . ++...++.++.++|+|
T Consensus 98 -------------------------~--~~~~~d~~~-~~~~~~~fD~v~~~~~~~~~--~---~~~~~~l~~~~~~Lkp 144 (260)
T 2avn_A 98 -------------------------K--NVVEAKAED-LPFPSGAFEAVLALGDVLSY--V---ENKDKAFSEIRRVLVP 144 (260)
T ss_dssp -------------------------S--CEEECCTTS-CCSCTTCEEEEEECSSHHHH--C---SCHHHHHHHHHHHEEE
T ss_pred -------------------------C--CEEECcHHH-CCCCCCCEEEEEEcchhhhc--c---ccHHHHHHHHHHHcCC
Confidence 1 166777755 45567889999998766322 1 2388999999999999
Q ss_pred CcEEEEeeCC
Q 047406 216 GGIFVLEPQP 225 (290)
Q Consensus 216 gG~l~i~~~~ 225 (290)
||.+++...+
T Consensus 145 gG~l~~~~~~ 154 (260)
T 2avn_A 145 DGLLIATVDN 154 (260)
T ss_dssp EEEEEEEEEB
T ss_pred CeEEEEEeCC
Confidence 9999996543
No 154
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.37 E-value=1.6e-12 Score=112.54 Aligned_cols=109 Identities=10% Similarity=0.137 Sum_probs=83.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+.++..
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~-------------------------------- 98 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSR-QAKKVTFLELDKTVANQLKKNLQT-------------------------------- 98 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHT-TCSEEEEECSCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCeEEEcCCccCHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 37899999999999999987665 345899999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcC-cceeEeecccccCCCC-CCCc-eeEEEEchhhhhhhhcCCchHHHHHHHHH--HhhcCC
Q 047406 141 AQEEKKAISRNCSPAERNLF-DIVSFKQENFVHGRDS-PEKY-YDAILCLSVTKWIHLNWGDDGLITLFMRI--WKLLRP 215 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~-~~~~-fD~I~~~~vl~~~~l~~~~~~~~~~l~~~--~~~Lkp 215 (290)
.++. .++.+...|+.+..+. +.++ ||+|++...++ ......++..+ .++|+|
T Consensus 99 ----------------~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-------~~~~~~~l~~~~~~~~Lkp 155 (201)
T 2ift_A 99 ----------------LKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH-------FNLAEQAISLLCENNWLKP 155 (201)
T ss_dssp ----------------TTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS-------SCHHHHHHHHHHHTTCEEE
T ss_pred ----------------hCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCC-------CccHHHHHHHHHhcCccCC
Confidence 2332 3688999998763332 3567 99999976632 24566778888 667999
Q ss_pred CcEEEEeeCC
Q 047406 216 GGIFVLEPQP 225 (290)
Q Consensus 216 gG~l~i~~~~ 225 (290)
||+++++..+
T Consensus 156 gG~l~i~~~~ 165 (201)
T 2ift_A 156 NALIYVETEK 165 (201)
T ss_dssp EEEEEEEEES
T ss_pred CcEEEEEECC
Confidence 9999997653
No 155
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.36 E-value=2.3e-12 Score=110.89 Aligned_cols=101 Identities=23% Similarity=0.239 Sum_probs=83.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.|+.++..
T Consensus 76 ~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 121 (210)
T 3lbf_A 76 TPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKN-------------------------------- 121 (210)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHH--------------------------------
Confidence 57899999999999999999987 56999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++. ++.+...|..+. ....++||+|++..+++++. ..+.++|+|||+++
T Consensus 122 ----------------~~~~-~v~~~~~d~~~~-~~~~~~~D~i~~~~~~~~~~------------~~~~~~L~pgG~lv 171 (210)
T 3lbf_A 122 ----------------LDLH-NVSTRHGDGWQG-WQARAPFDAIIVTAAPPEIP------------TALMTQLDEGGILV 171 (210)
T ss_dssp ----------------TTCC-SEEEEESCGGGC-CGGGCCEEEEEESSBCSSCC------------THHHHTEEEEEEEE
T ss_pred ----------------cCCC-ceEEEECCcccC-CccCCCccEEEEccchhhhh------------HHHHHhcccCcEEE
Confidence 2232 588999998774 23357899999998886542 25889999999999
Q ss_pred EeeCC
Q 047406 221 LEPQP 225 (290)
Q Consensus 221 i~~~~ 225 (290)
+..++
T Consensus 172 ~~~~~ 176 (210)
T 3lbf_A 172 LPVGE 176 (210)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 98764
No 156
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.36 E-value=2.2e-12 Score=111.41 Aligned_cols=114 Identities=14% Similarity=0.159 Sum_probs=86.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++ .+++|+|+|+.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------------------------------- 97 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------------------------------- 97 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS-------------------------------------------
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC-------------------------------------------
Confidence 577899999999999987763 48999999874
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.+.+...|+.+ .+.+.++||+|+|..++|| .+...++.++.++|+|||.++
T Consensus 98 ---------------------~~~~~~~d~~~-~~~~~~~fD~v~~~~~l~~-------~~~~~~l~~~~~~L~~gG~l~ 148 (215)
T 2zfu_A 98 ---------------------DPRVTVCDMAQ-VPLEDESVDVAVFCLSLMG-------TNIRDFLEEANRVLKPGGLLK 148 (215)
T ss_dssp ---------------------STTEEESCTTS-CSCCTTCEEEEEEESCCCS-------SCHHHHHHHHHHHEEEEEEEE
T ss_pred ---------------------CceEEEecccc-CCCCCCCEeEEEEehhccc-------cCHHHHHHHHHHhCCCCeEEE
Confidence 14466777655 4556678999999998852 357899999999999999999
Q ss_pred EeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 221 LEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+...... ...++++.. +++++||++++....
T Consensus 149 i~~~~~~-------------------~~~~~~~~~-~l~~~Gf~~~~~~~~ 179 (215)
T 2zfu_A 149 VAEVSSR-------------------FEDVRTFLR-AVTKLGFKIVSKDLT 179 (215)
T ss_dssp EEECGGG-------------------CSCHHHHHH-HHHHTTEEEEEEECC
T ss_pred EEEcCCC-------------------CCCHHHHHH-HHHHCCCEEEEEecC
Confidence 9643110 013455555 899999998876543
No 157
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.35 E-value=1.6e-11 Score=110.16 Aligned_cols=139 Identities=14% Similarity=0.123 Sum_probs=90.5
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.+|.+|||+|||+|..+..+|...+ ..+|+|+|+|+.+++........
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~------------------------------ 123 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR------------------------------ 123 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh------------------------------
Confidence 46899999999999999999998754 55899999999987665443222
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCC--CCCCCceeEEEEchhhhhhhhcCCchHHHH-HHHHHHhhcCC
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR--DSPEKYYDAILCLSVTKWIHLNWGDDGLIT-LFMRIWKLLRP 215 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~-~l~~~~~~Lkp 215 (290)
..++.+...|..... ....++||+|++.... .++.. ++..+.+.|+|
T Consensus 124 ---------------------r~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---------~~~~~il~~~~~~~Lkp 173 (232)
T 3id6_C 124 ---------------------RPNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---------PDQTDIAIYNAKFFLKV 173 (232)
T ss_dssp ---------------------CTTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---------TTHHHHHHHHHHHHEEE
T ss_pred ---------------------cCCeEEEEcccccchhhhccccceEEEEecCCC---------hhHHHHHHHHHHHhCCC
Confidence 125788888876521 1124689999986443 23444 44556669999
Q ss_pred CcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 216 GGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 216 gG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
||.|+++... .|... +.....++ +.... .|+++||++++.+.-
T Consensus 174 GG~lvisik~-~~~d~----t~~~~e~~-------~~~~~-~L~~~gf~~~~~~~l 216 (232)
T 3id6_C 174 NGDMLLVIKA-RSIDV----TKDPKEIY-------KTEVE-KLENSNFETIQIINL 216 (232)
T ss_dssp EEEEEEEEC------------CCSSSST-------THHHH-HHHHTTEEEEEEEEC
T ss_pred CeEEEEEEcc-CCccc----CCCHHHHH-------HHHHH-HHHHCCCEEEEEecc
Confidence 9999996421 01000 00011111 22233 678899999998766
No 158
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.35 E-value=5.2e-12 Score=111.57 Aligned_cols=105 Identities=17% Similarity=0.194 Sum_probs=83.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.++.+|||+|||+|.++..+++.. +..+|+++|+|+.+++.|+.++...
T Consensus 94 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~----------------------------- 144 (258)
T 2pwy_A 94 LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAF----------------------------- 144 (258)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-----------------------------
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHh-----------------------------
Confidence 3678999999999999999999884 4569999999999999999987651
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.+ ..++.+...|+.+. +.+.+.||+|++.. .+...++.++.++|+|||.
T Consensus 145 ------------------~g-~~~v~~~~~d~~~~-~~~~~~~D~v~~~~-----------~~~~~~l~~~~~~L~~gG~ 193 (258)
T 2pwy_A 145 ------------------WQ-VENVRFHLGKLEEA-ELEEAAYDGVALDL-----------MEPWKVLEKAALALKPDRF 193 (258)
T ss_dssp ------------------CC-CCCEEEEESCGGGC-CCCTTCEEEEEEES-----------SCGGGGHHHHHHHEEEEEE
T ss_pred ------------------cC-CCCEEEEECchhhc-CCCCCCcCEEEECC-----------cCHHHHHHHHHHhCCCCCE
Confidence 02 23588899998763 44557899999831 2334778999999999999
Q ss_pred EEEeeC
Q 047406 219 FVLEPQ 224 (290)
Q Consensus 219 l~i~~~ 224 (290)
+++..+
T Consensus 194 l~~~~~ 199 (258)
T 2pwy_A 194 LVAYLP 199 (258)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999754
No 159
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.35 E-value=1.7e-12 Score=118.33 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=78.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.|++++..
T Consensus 44 ~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~~~~~-------------------------------- 89 (261)
T 3iv6_A 44 VPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAEALAD-------------------------------- 89 (261)
T ss_dssp CTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTSS--------------------------------
T ss_pred CCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 57889999999999999999886 45899999999999999886432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
. .-...+...+... .....++||+|+|..+++|+. .++...++.++.++| |||+++
T Consensus 90 ----------------~--~v~~~~~~~~~~~-~~~~~~~fD~Vv~~~~l~~~~----~~~~~~~l~~l~~lL-PGG~l~ 145 (261)
T 3iv6_A 90 ----------------R--CVTIDLLDITAEI-PKELAGHFDFVLNDRLINRFT----TEEARRACLGMLSLV-GSGTVR 145 (261)
T ss_dssp ----------------S--CCEEEECCTTSCC-CGGGTTCCSEEEEESCGGGSC----HHHHHHHHHHHHHHH-TTSEEE
T ss_pred ----------------c--cceeeeeeccccc-ccccCCCccEEEEhhhhHhCC----HHHHHHHHHHHHHhC-cCcEEE
Confidence 0 0112222222200 011246899999999987653 467889999999999 999999
Q ss_pred EeeC
Q 047406 221 LEPQ 224 (290)
Q Consensus 221 i~~~ 224 (290)
++..
T Consensus 146 lS~~ 149 (261)
T 3iv6_A 146 ASVK 149 (261)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9753
No 160
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.35 E-value=2.5e-12 Score=124.49 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=86.8
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||||||+|.+++.+|...++.+|+|+|+|+.+++.|+.++..+... .
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr-------~------------------- 224 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKW-------M------------------- 224 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHH-------H-------------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHH-------H-------------------
Confidence 36889999999999999999998877767999999999999999876431000 0
Q ss_pred hHHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCC--CceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 140 AAQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPE--KYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~--~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
...++ ..++.|.++|+.+. +... ..||+|++++.+. .+++...|.++.+.|+||
T Consensus 225 ---------------~~~Gl~~~rVefi~GD~~~l-p~~d~~~~aDVVf~Nn~~F-------~pdl~~aL~Ei~RvLKPG 281 (438)
T 3uwp_A 225 ---------------KWYGKKHAEYTLERGDFLSE-EWRERIANTSVIFVNNFAF-------GPEVDHQLKERFANMKEG 281 (438)
T ss_dssp ---------------HHHTBCCCEEEEEECCTTSH-HHHHHHHTCSEEEECCTTC-------CHHHHHHHHHHHTTSCTT
T ss_pred ---------------HHhCCCCCCeEEEECcccCC-ccccccCCccEEEEccccc-------CchHHHHHHHHHHcCCCC
Confidence 00122 24699999999772 3222 4699999987652 257788889999999999
Q ss_pred cEEEEe
Q 047406 217 GIFVLE 222 (290)
Q Consensus 217 G~l~i~ 222 (290)
|+|++.
T Consensus 282 GrIVss 287 (438)
T 3uwp_A 282 GRIVSS 287 (438)
T ss_dssp CEEEES
T ss_pred cEEEEe
Confidence 999984
No 161
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.35 E-value=2.2e-12 Score=115.63 Aligned_cols=109 Identities=19% Similarity=0.322 Sum_probs=87.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|..+..++..++ ..+|+++|+|+.+++.|++++..
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~------------------------------- 126 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKK------------------------------- 126 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHH-------------------------------
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 5678999999999999999999876 57999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC------CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP------EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~------~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
.++..++.+..+|..+.++.. .++||+|++... ......++..+.++|
T Consensus 127 -----------------~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~---------~~~~~~~l~~~~~~L 180 (247)
T 1sui_A 127 -----------------AGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD---------KDNYLNYHKRLIDLV 180 (247)
T ss_dssp -----------------TTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC---------STTHHHHHHHHHHHB
T ss_pred -----------------cCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc---------hHHHHHHHHHHHHhC
Confidence 334456888888876532211 478999998543 245678899999999
Q ss_pred CCCcEEEEeeCCC
Q 047406 214 RPGGIFVLEPQPW 226 (290)
Q Consensus 214 kpgG~l~i~~~~~ 226 (290)
+|||++++....|
T Consensus 181 kpGG~lv~d~~~~ 193 (247)
T 1sui_A 181 KVGGVIGYDNTLW 193 (247)
T ss_dssp CTTCCEEEECTTG
T ss_pred CCCeEEEEecCCc
Confidence 9999999975544
No 162
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.35 E-value=2.3e-12 Score=122.49 Aligned_cols=109 Identities=23% Similarity=0.323 Sum_probs=87.1
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|++++..
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s-~~~~~a~~~~~~------------------------------- 107 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEAT-KMADHARALVKA------------------------------- 107 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESS-TTHHHHHHHHHH-------------------------------
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccH-HHHHHHHHHHHH-------------------------------
Confidence 367899999999999999998886 44599999999 999999988765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++...+.+...|+.+ ++.+ ++||+|+|..+.+++. ....+..++..+.++|+|||++
T Consensus 108 -----------------~~~~~~v~~~~~d~~~-~~~~-~~~D~Iv~~~~~~~l~---~e~~~~~~l~~~~~~LkpgG~l 165 (376)
T 3r0q_C 108 -----------------NNLDHIVEVIEGSVED-ISLP-EKVDVIISEWMGYFLL---RESMFDSVISARDRWLKPTGVM 165 (376)
T ss_dssp -----------------TTCTTTEEEEESCGGG-CCCS-SCEEEEEECCCBTTBT---TTCTHHHHHHHHHHHEEEEEEE
T ss_pred -----------------cCCCCeEEEEECchhh-cCcC-CcceEEEEcChhhccc---chHHHHHHHHHHHhhCCCCeEE
Confidence 4455669999999976 3444 7899999965543221 2345788999999999999999
Q ss_pred EEee
Q 047406 220 VLEP 223 (290)
Q Consensus 220 ~i~~ 223 (290)
++..
T Consensus 166 i~~~ 169 (376)
T 3r0q_C 166 YPSH 169 (376)
T ss_dssp ESSE
T ss_pred EEec
Confidence 8843
No 163
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.34 E-value=1.3e-12 Score=109.67 Aligned_cols=109 Identities=13% Similarity=0.169 Sum_probs=82.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+.++..
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 89 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-GMDKSICIEKNFAALKVIKENIAI-------------------------------- 89 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 47889999999999999988774 556999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC---CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHH--HhhcCC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD---SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRI--WKLLRP 215 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~--~~~Lkp 215 (290)
.++..++.+...|+.+..+ ...++||+|++....+. ......+..+ .++|+|
T Consensus 90 ----------------~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~~-------~~~~~~~~~l~~~~~L~~ 146 (187)
T 2fhp_A 90 ----------------TKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYAK-------QEIVSQLEKMLERQLLTN 146 (187)
T ss_dssp ----------------HTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGGG-------CCHHHHHHHHHHTTCEEE
T ss_pred ----------------hCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCCc-------hhHHHHHHHHHHhcccCC
Confidence 2333468889988866211 12578999999766421 2334556666 888999
Q ss_pred CcEEEEeeCC
Q 047406 216 GGIFVLEPQP 225 (290)
Q Consensus 216 gG~l~i~~~~ 225 (290)
||++++....
T Consensus 147 gG~l~~~~~~ 156 (187)
T 2fhp_A 147 EAVIVCETDK 156 (187)
T ss_dssp EEEEEEEEET
T ss_pred CCEEEEEeCC
Confidence 9999997653
No 164
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.34 E-value=3.9e-12 Score=119.22 Aligned_cols=147 Identities=15% Similarity=0.119 Sum_probs=102.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||||||+|..+..+++.+|..+++++|+ +.+++.|+.
T Consensus 191 ~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~----------------------------------- 234 (358)
T 1zg3_A 191 FEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG----------------------------------- 234 (358)
T ss_dssp HHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC-----------------------------------
T ss_pred ccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc-----------------------------------
Confidence 35678999999999999999999998889999999 777654321
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC---C
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP---G 216 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp---g 216 (290)
. .++.+...|+.+ +.+ .||+|++..++|++ .++....+++++.++|+| |
T Consensus 235 -------------------~-~~v~~~~~d~~~--~~~--~~D~v~~~~vlh~~----~d~~~~~~l~~~~~~L~p~~~g 286 (358)
T 1zg3_A 235 -------------------N-ENLNFVGGDMFK--SIP--SADAVLLKWVLHDW----NDEQSLKILKNSKEAISHKGKD 286 (358)
T ss_dssp -------------------C-SSEEEEECCTTT--CCC--CCSEEEEESCGGGS----CHHHHHHHHHHHHHHTGGGGGG
T ss_pred -------------------C-CCcEEEeCccCC--CCC--CceEEEEcccccCC----CHHHHHHHHHHHHHhCCCCCCC
Confidence 1 248899999876 333 49999999999744 455667999999999999 9
Q ss_pred cEEEEeeCCCchhh------hhhhhhhh-hhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 217 GIFVLEPQPWVSYE------KNRRVSET-TATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 217 G~l~i~~~~~~~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
|.+++......... ........ +...........+++.+ +++++||+.+++...
T Consensus 287 G~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~-ll~~aGf~~~~~~~~ 347 (358)
T 1zg3_A 287 GKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEK-LIYDAGFSSYKITPI 347 (358)
T ss_dssp CEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHH-HHHHTTCCEEEEEEE
T ss_pred cEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHH-HHHHcCCCeeEEEec
Confidence 99998543211100 00111111 00111222345566666 899999999988764
No 165
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.34 E-value=1.3e-11 Score=107.63 Aligned_cols=104 Identities=15% Similarity=0.118 Sum_probs=80.1
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.+++.+..++..
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~------------------------------ 120 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE------------------------------ 120 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS------------------------------
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc------------------------------
Confidence 35788999999999999999998763 46999999999999998876432
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCC--CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR--DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~--~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
. .++.+...|+.+.. ....++||+|++.... .+....++.++.++|+||
T Consensus 121 ------------------~---~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~~--------~~~~~~~l~~~~~~Lkpg 171 (227)
T 1g8a_A 121 ------------------R---RNIVPILGDATKPEEYRALVPKVDVIFEDVAQ--------PTQAKILIDNAEVYLKRG 171 (227)
T ss_dssp ------------------C---TTEEEEECCTTCGGGGTTTCCCEEEEEECCCS--------TTHHHHHHHHHHHHEEEE
T ss_pred ------------------c---CCCEEEEccCCCcchhhcccCCceEEEECCCC--------HhHHHHHHHHHHHhcCCC
Confidence 1 35888888886621 1223589999975441 233445699999999999
Q ss_pred cEEEEe
Q 047406 217 GIFVLE 222 (290)
Q Consensus 217 G~l~i~ 222 (290)
|.+++.
T Consensus 172 G~l~~~ 177 (227)
T 1g8a_A 172 GYGMIA 177 (227)
T ss_dssp EEEEEE
T ss_pred CEEEEE
Confidence 999996
No 166
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.34 E-value=1.4e-12 Score=116.58 Aligned_cols=98 Identities=19% Similarity=0.263 Sum_probs=79.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.|+...
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~---------------------------------- 129 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY---------------------------------- 129 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC----------------------------------
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC----------------------------------
Confidence 4678999999999999999998876679999999999999987631
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++.+...|+.+ ++.+.++||+|+|..+. ..+.++.++|+|||.++
T Consensus 130 --------------------~~~~~~~~d~~~-~~~~~~~fD~v~~~~~~-------------~~l~~~~~~L~pgG~l~ 175 (269)
T 1p91_A 130 --------------------PQVTFCVASSHR-LPFSDTSMDAIIRIYAP-------------CKAEELARVVKPGGWVI 175 (269)
T ss_dssp --------------------TTSEEEECCTTS-CSBCTTCEEEEEEESCC-------------CCHHHHHHHEEEEEEEE
T ss_pred --------------------CCcEEEEcchhh-CCCCCCceeEEEEeCCh-------------hhHHHHHHhcCCCcEEE
Confidence 136778888765 45566799999986553 23688999999999999
Q ss_pred EeeCCC
Q 047406 221 LEPQPW 226 (290)
Q Consensus 221 i~~~~~ 226 (290)
+..+..
T Consensus 176 ~~~~~~ 181 (269)
T 1p91_A 176 TATPGP 181 (269)
T ss_dssp EEEECT
T ss_pred EEEcCH
Confidence 976543
No 167
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.33 E-value=3.9e-12 Score=110.12 Aligned_cols=106 Identities=11% Similarity=0.081 Sum_probs=82.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.+++.++... ..+|+++|+|+.+++.|+.++..
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~-~~~V~~vD~s~~~l~~a~~~~~~--------------------------------- 99 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY-AAGATLIEMDRAVSQQLIKNLAT--------------------------------- 99 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT-CSEEEEECSCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC-CCEEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 78999999999999999877653 34899999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHh--hcCCCcEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWK--LLRPGGIF 219 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~--~LkpgG~l 219 (290)
.++ .++.+.+.|+.+..+...+.||+|++....+ ......++..+.+ +|+|||++
T Consensus 100 ---------------~~~-~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~-------~~~~~~~l~~l~~~~~L~pgG~l 156 (202)
T 2fpo_A 100 ---------------LKA-GNARVVNSNAMSFLAQKGTPHNIVFVDPPFR-------RGLLEETINLLEDNGWLADEALI 156 (202)
T ss_dssp ---------------TTC-CSEEEECSCHHHHHSSCCCCEEEEEECCSSS-------TTTHHHHHHHHHHTTCEEEEEEE
T ss_pred ---------------cCC-CcEEEEECCHHHHHhhcCCCCCEEEECCCCC-------CCcHHHHHHHHHhcCccCCCcEE
Confidence 233 4688999998664344557899999876532 1344567777765 59999999
Q ss_pred EEeeC
Q 047406 220 VLEPQ 224 (290)
Q Consensus 220 ~i~~~ 224 (290)
+++..
T Consensus 157 ~i~~~ 161 (202)
T 2fpo_A 157 YVESE 161 (202)
T ss_dssp EEEEE
T ss_pred EEEEC
Confidence 99754
No 168
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.33 E-value=5.9e-12 Score=116.36 Aligned_cols=143 Identities=15% Similarity=0.216 Sum_probs=97.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++.....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~----------------------------- 144 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISR----------------------------- 144 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHG-----------------------------
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhc-----------------------------
Confidence 467899999999999999998875667999999999999999987643100
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCC-CCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS-PEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG 217 (290)
.....++.+...|+.+.... +.++||+|++.....+. ....+ ..++.++.++|+|||
T Consensus 145 ----------------~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~----~~~~l~~~~~l~~~~~~LkpgG 204 (304)
T 3bwc_A 145 ----------------SLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAG----PASKLFGEAFYKDVLRILKPDG 204 (304)
T ss_dssp ----------------GGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC-------------CCHHHHHHHHHHEEEEE
T ss_pred ----------------ccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccc----cchhhhHHHHHHHHHHhcCCCc
Confidence 01123588888887663222 35789999996554321 11222 688999999999999
Q ss_pred EEEEeeCC-CchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 218 IFVLEPQP-WVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 218 ~l~i~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
++++.... |.. ......+.+ .++++||..++.+..
T Consensus 205 ~lv~~~~~~~~~------------------~~~~~~~~~-~l~~~GF~~v~~~~~ 240 (304)
T 3bwc_A 205 ICCNQGESIWLD------------------LELIEKMSR-FIRETGFASVQYALM 240 (304)
T ss_dssp EEEEEECCTTTC------------------HHHHHHHHH-HHHHHTCSEEEEEEC
T ss_pred EEEEecCCcccc------------------hHHHHHHHH-HHHhCCCCcEEEEEe
Confidence 99996432 110 011233334 688899998877654
No 169
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.33 E-value=3.3e-12 Score=112.82 Aligned_cols=109 Identities=18% Similarity=0.239 Sum_probs=85.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|..+..+++.++ ..+|+++|+|+.+++.|+.++..
T Consensus 59 ~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~------------------------------- 107 (239)
T 2hnk_A 59 SGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKE------------------------------- 107 (239)
T ss_dssp HTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred hCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 5789999999999999999999876 56999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCC--------------CCC--CceeEEEEchhhhhhhhcCCchHHH
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--------------SPE--KYYDAILCLSVTKWIHLNWGDDGLI 203 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------------~~~--~~fD~I~~~~vl~~~~l~~~~~~~~ 203 (290)
.++...+.+...|..+..+ .+. ++||+|++.... +...
T Consensus 108 -----------------~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~---------~~~~ 161 (239)
T 2hnk_A 108 -----------------NGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK---------ENYP 161 (239)
T ss_dssp -----------------TTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG---------GGHH
T ss_pred -----------------cCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCH---------HHHH
Confidence 2233347777777654211 122 689999986443 4567
Q ss_pred HHHHHHHhhcCCCcEEEEeeCCC
Q 047406 204 TLFMRIWKLLRPGGIFVLEPQPW 226 (290)
Q Consensus 204 ~~l~~~~~~LkpgG~l~i~~~~~ 226 (290)
.++..+.++|+|||++++....|
T Consensus 162 ~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 162 NYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHHHHHHHcCCCeEEEEEcccc
Confidence 88999999999999999976544
No 170
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.33 E-value=5.7e-13 Score=119.15 Aligned_cols=109 Identities=16% Similarity=0.246 Sum_probs=88.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|..+..+|..++ ..+|+++|+|+.+++.|+.++..
T Consensus 59 ~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~------------------------------- 107 (242)
T 3r3h_A 59 TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWRE------------------------------- 107 (242)
T ss_dssp HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHH-------------------------------
T ss_pred cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 5678999999999999999999775 57999999999999999998776
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-----CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-----EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.++..++.+..+|..+.++.. .++||+|++.... .....++..+.++|+
T Consensus 108 -----------------~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~---------~~~~~~l~~~~~~Lk 161 (242)
T 3r3h_A 108 -----------------AKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADK---------TNYLNYYELALKLVT 161 (242)
T ss_dssp -----------------TTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESCG---------GGHHHHHHHHHHHEE
T ss_pred -----------------cCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCCh---------HHhHHHHHHHHHhcC
Confidence 344457899999986632221 4789999985442 456778999999999
Q ss_pred CCcEEEEeeCCC
Q 047406 215 PGGIFVLEPQPW 226 (290)
Q Consensus 215 pgG~l~i~~~~~ 226 (290)
|||++++....|
T Consensus 162 pGG~lv~d~~~~ 173 (242)
T 3r3h_A 162 PKGLIAIDNIFW 173 (242)
T ss_dssp EEEEEEEECSSS
T ss_pred CCeEEEEECCcc
Confidence 999999965544
No 171
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.33 E-value=7.6e-12 Score=117.37 Aligned_cols=108 Identities=22% Similarity=0.326 Sum_probs=85.0
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|++++..
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~-~~~~a~~~~~~------------------------------- 108 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSE-ILYQAMDIIRL------------------------------- 108 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESST-HHHHHHHHHHH-------------------------------
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHH-HHHHHHHHHHH-------------------------------
Confidence 367899999999999999998886 455899999997 99999887765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++..++.+...|+.+ .+.+.++||+|+|..+...+. ....+..++..+.++|+|||++
T Consensus 109 -----------------~~~~~~i~~~~~d~~~-~~~~~~~~D~Ivs~~~~~~l~---~~~~~~~~l~~~~~~LkpgG~l 167 (340)
T 2fyt_A 109 -----------------NKLEDTITLIKGKIEE-VHLPVEKVDVIISEWMGYFLL---FESMLDSVLYAKNKYLAKGGSV 167 (340)
T ss_dssp -----------------TTCTTTEEEEESCTTT-SCCSCSCEEEEEECCCBTTBT---TTCHHHHHHHHHHHHEEEEEEE
T ss_pred -----------------cCCCCcEEEEEeeHHH-hcCCCCcEEEEEEcCchhhcc---CHHHHHHHHHHHHhhcCCCcEE
Confidence 3444578999999876 455667899999976321111 1346778999999999999999
Q ss_pred EE
Q 047406 220 VL 221 (290)
Q Consensus 220 ~i 221 (290)
+.
T Consensus 168 ip 169 (340)
T 2fyt_A 168 YP 169 (340)
T ss_dssp ES
T ss_pred Ec
Confidence 83
No 172
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.32 E-value=5.6e-12 Score=112.00 Aligned_cols=109 Identities=21% Similarity=0.309 Sum_probs=87.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||||||+|..+..+++.++ ..+|+++|+|+.+++.|+.++..
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~------------------------------- 117 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRK------------------------------- 117 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 5678999999999999999999876 57999999999999999998775
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCC------CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhc
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS------PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~------~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~L 213 (290)
.++..++.+..+|..+.++. +.++||+|++... ......++..+.++|
T Consensus 118 -----------------~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~---------~~~~~~~l~~~~~~L 171 (237)
T 3c3y_A 118 -----------------AGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDAD---------KPNYIKYHERLMKLV 171 (237)
T ss_dssp -----------------TTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSC---------GGGHHHHHHHHHHHE
T ss_pred -----------------cCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCc---------hHHHHHHHHHHHHhc
Confidence 33444688888887653221 1478999997532 245678999999999
Q ss_pred CCCcEEEEeeCCC
Q 047406 214 RPGGIFVLEPQPW 226 (290)
Q Consensus 214 kpgG~l~i~~~~~ 226 (290)
+|||++++....|
T Consensus 172 ~pGG~lv~d~~~~ 184 (237)
T 3c3y_A 172 KVGGIVAYDNTLW 184 (237)
T ss_dssp EEEEEEEEECTTG
T ss_pred CCCeEEEEecCCc
Confidence 9999999975544
No 173
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.32 E-value=7.4e-12 Score=116.37 Aligned_cols=116 Identities=14% Similarity=0.177 Sum_probs=81.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.++.+|||+|||+|.++..+++.. +..+|+++|+++.+++.|++++...+..
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------------------- 156 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDS-------------------------- 156 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHH--------------------------
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcc--------------------------
Confidence 4688999999999999999999875 4469999999999999999987652100
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCC-CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR-DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
| .+.. -.++..++.+...|+.+.. +.+.+.||+|++..... ..++.++.++|+|||
T Consensus 157 ------~-----~ln~-~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~~~~-----------~~~l~~~~~~LkpgG 213 (336)
T 2b25_A 157 ------W-----KLSH-VEEWPDNVDFIHKDISGATEDIKSLTFDAVALDMLNP-----------HVTLPVFYPHLKHGG 213 (336)
T ss_dssp ------H-----TTTC-SSCCCCCEEEEESCTTCCC-------EEEEEECSSST-----------TTTHHHHGGGEEEEE
T ss_pred ------c-----cccc-ccccCCceEEEECChHHcccccCCCCeeEEEECCCCH-----------HHHHHHHHHhcCCCc
Confidence 0 0000 0112346889999987642 23456899999853321 236789999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
.+++..+
T Consensus 214 ~lv~~~~ 220 (336)
T 2b25_A 214 VCAVYVV 220 (336)
T ss_dssp EEEEEES
T ss_pred EEEEEeC
Confidence 9998665
No 174
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.31 E-value=1.5e-12 Score=120.58 Aligned_cols=144 Identities=17% Similarity=0.125 Sum_probs=88.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.+.....
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~--------------------------------- 129 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDD--------------------------------- 129 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCT---------------------------------
T ss_pred ccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCc---------------------------------
Confidence 46789999999999999988886 55699999999999988543200
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccC--CCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHG--RDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
....+...|+... ...+..+||+|+|..+++ .+..+|..+.++|+|||.
T Consensus 130 --------------------rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~---------sl~~vL~e~~rvLkpGG~ 180 (291)
T 3hp7_A 130 --------------------RVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFI---------SLNLILPALAKILVDGGQ 180 (291)
T ss_dssp --------------------TEEEECSCCGGGCCGGGCTTCCCSEEEECCSSS---------CGGGTHHHHHHHSCTTCE
T ss_pred --------------------ccceecccCceecchhhCCCCCCCEEEEEeeHh---------hHHHHHHHHHHHcCcCCE
Confidence 0011222232221 011334599999876653 236789999999999999
Q ss_pred EEEeeCC-Cchhhhhhhhh--hhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 219 FVLEPQP-WVSYEKNRRVS--ETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 219 l~i~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
+++...| |..... .+. .... .........+++.+ ++..+||.+..+..+
T Consensus 181 lv~lvkPqfe~~~~--~~~~~G~vr-d~~~~~~~~~~v~~-~~~~~Gf~v~~~~~s 232 (291)
T 3hp7_A 181 VVALVKPQFEAGRE--QIGKNGIVR-ESSIHEKVLETVTA-FAVDYGFSVKGLDFS 232 (291)
T ss_dssp EEEEECGGGTSCGG--GCC-CCCCC-CHHHHHHHHHHHHH-HHHHTTEEEEEEEEC
T ss_pred EEEEECcccccChh--hcCCCCccC-CHHHHHHHHHHHHH-HHHHCCCEEEEEEEC
Confidence 9885322 111000 000 0000 00011223344444 788999999888776
No 175
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.31 E-value=9.9e-13 Score=108.65 Aligned_cols=104 Identities=16% Similarity=0.152 Sum_probs=77.9
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..+++..+ .|+|+|+|+.+++.|+.++..
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~--------------------------------- 85 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRR--------------------------------- 85 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHH---------------------------------
Confidence 789999999999999999988743 599999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCC---CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH--hhcCCC
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS---PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW--KLLRPG 216 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~--~~Lkpg 216 (290)
.++ ++.+.+.|+.+..+. ..++||+|++....+ . ....++..+. ++|+||
T Consensus 86 ---------------~~~--~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~-~-------~~~~~~~~~~~~~~L~~g 140 (171)
T 1ws6_A 86 ---------------TGL--GARVVALPVEVFLPEAKAQGERFTVAFMAPPYA-M-------DLAALFGELLASGLVEAG 140 (171)
T ss_dssp ---------------HTC--CCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT-S-------CTTHHHHHHHHHTCEEEE
T ss_pred ---------------cCC--ceEEEeccHHHHHHhhhccCCceEEEEECCCCc-h-------hHHHHHHHHHhhcccCCC
Confidence 222 477888887652111 124799999986653 1 1223444444 999999
Q ss_pred cEEEEeeCC
Q 047406 217 GIFVLEPQP 225 (290)
Q Consensus 217 G~l~i~~~~ 225 (290)
|+++++..+
T Consensus 141 G~~~~~~~~ 149 (171)
T 1ws6_A 141 GLYVLQHPK 149 (171)
T ss_dssp EEEEEEEET
T ss_pred cEEEEEeCC
Confidence 999997654
No 176
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.31 E-value=3.6e-12 Score=125.31 Aligned_cols=107 Identities=21% Similarity=0.330 Sum_probs=84.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.+++.+++ .+..+|+|+|+|+ +++.|++++..
T Consensus 157 ~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~-~l~~A~~~~~~-------------------------------- 202 (480)
T 3b3j_A 157 FKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEAST-MAQHAEVLVKS-------------------------------- 202 (480)
T ss_dssp TTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHH-HHHHHHHHHHH--------------------------------
T ss_pred cCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHH-HHHHHHHHHHH--------------------------------
Confidence 4678999999999999998877 4666999999998 99999887765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++.+++.+...|+.+ .+. .++||+|+|..+.++. ..+.....+..+.++|+|||+++
T Consensus 203 ----------------~gl~~~v~~~~~d~~~-~~~-~~~fD~Ivs~~~~~~~----~~e~~~~~l~~~~~~LkpgG~li 260 (480)
T 3b3j_A 203 ----------------NNLTDRIVVIPGKVEE-VSL-PEQVDIIISEPMGYML----FNERMLESYLHAKKYLKPSGNMF 260 (480)
T ss_dssp ----------------TTCTTTEEEEESCTTT-CCC-SSCEEEEECCCCHHHH----TCHHHHHHHHHGGGGEEEEEEEE
T ss_pred ----------------cCCCCcEEEEECchhh-Ccc-CCCeEEEEEeCchHhc----CcHHHHHHHHHHHHhcCCCCEEE
Confidence 4455679999999876 233 3689999997765322 23566777888999999999999
Q ss_pred Eee
Q 047406 221 LEP 223 (290)
Q Consensus 221 i~~ 223 (290)
++.
T Consensus 261 ~~~ 263 (480)
T 3b3j_A 261 PTI 263 (480)
T ss_dssp SCE
T ss_pred EEe
Confidence 744
No 177
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.30 E-value=9.3e-12 Score=108.38 Aligned_cols=110 Identities=28% Similarity=0.321 Sum_probs=82.9
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKN 137 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (290)
...++.+|||+|||+|..+..+++..+ ..+|+++|+|+.+++.++.++...+..
T Consensus 74 ~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~------------------------- 128 (226)
T 1i1n_A 74 QLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPT------------------------- 128 (226)
T ss_dssp TSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTH-------------------------
T ss_pred hCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhccc-------------------------
Confidence 356789999999999999999998764 359999999999999999877541100
Q ss_pred hhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 138 VTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
.....++.+...|.... ....++||+|++...++. ++.++.++|+|||
T Consensus 129 -------------------~~~~~~v~~~~~d~~~~-~~~~~~fD~i~~~~~~~~------------~~~~~~~~LkpgG 176 (226)
T 1i1n_A 129 -------------------LLSSGRVQLVVGDGRMG-YAEEAPYDAIHVGAAAPV------------VPQALIDQLKPGG 176 (226)
T ss_dssp -------------------HHHTSSEEEEESCGGGC-CGGGCCEEEEEECSBBSS------------CCHHHHHTEEEEE
T ss_pred -------------------ccCCCcEEEEECCcccC-cccCCCcCEEEECCchHH------------HHHHHHHhcCCCc
Confidence 00023578888888653 223568999999877632 2467899999999
Q ss_pred EEEEeeCC
Q 047406 218 IFVLEPQP 225 (290)
Q Consensus 218 ~l~i~~~~ 225 (290)
++++...+
T Consensus 177 ~lv~~~~~ 184 (226)
T 1i1n_A 177 RLILPVGP 184 (226)
T ss_dssp EEEEEESC
T ss_pred EEEEEEec
Confidence 99997654
No 178
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.30 E-value=1.2e-11 Score=110.00 Aligned_cols=123 Identities=14% Similarity=0.116 Sum_probs=85.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.|+.++......
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~---------------------------- 99 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNN---------------------------- 99 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHT----------------------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhc----------------------------
Confidence 4678999999999999999999887779999999999999999987652100
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC--CCCCceeEEEEchhhhhhhhcCC--chHHHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--SPEKYYDAILCLSVTKWIHLNWG--DDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--~~~~~fD~I~~~~vl~~~~l~~~--~~~~~~~l~~~~~~Lkpg 216 (290)
+ ....++ .++.+...|+.+.++ .+.+.+|.|+....-.|...... .-....++.++.++|+||
T Consensus 100 ----------~--~~~~~~-~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lkpg 166 (246)
T 2vdv_E 100 ----------T--ASKHGF-QNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEG 166 (246)
T ss_dssp ----------C---CCSTT-TTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEE
T ss_pred ----------c--ccccCC-CcEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCC
Confidence 0 000022 358899999876433 45678999986432222100000 000147899999999999
Q ss_pred cEEEEeeC
Q 047406 217 GIFVLEPQ 224 (290)
Q Consensus 217 G~l~i~~~ 224 (290)
|+|++...
T Consensus 167 G~l~~~td 174 (246)
T 2vdv_E 167 GVVYTITD 174 (246)
T ss_dssp EEEEEEES
T ss_pred CEEEEEec
Confidence 99999653
No 179
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.30 E-value=2.5e-11 Score=112.62 Aligned_cols=115 Identities=22% Similarity=0.230 Sum_probs=84.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..++.+|||+|||+|..+..+++.++ ..+|+|+|+|+.+++.++.++...
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~----------------------------- 166 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL----------------------------- 166 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH-----------------------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh-----------------------------
Confidence 35789999999999999999998875 368999999999999999988762
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchh------hhhhh---hcCCc-------hHH
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSV------TKWIH---LNWGD-------DGL 202 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~v------l~~~~---l~~~~-------~~~ 202 (290)
++. ++.+...|+.+. +...+.||+|++... ++... ..|.. ..+
T Consensus 167 -------------------g~~-~v~~~~~D~~~~-~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q 225 (315)
T 1ixk_A 167 -------------------GVL-NVILFHSSSLHI-GELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQ 225 (315)
T ss_dssp -------------------TCC-SEEEESSCGGGG-GGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHH
T ss_pred -------------------CCC-eEEEEECChhhc-ccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHH
Confidence 222 478888888663 223468999998422 11000 00111 123
Q ss_pred HHHHHHHHhhcCCCcEEEEeeC
Q 047406 203 ITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 203 ~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
..++.++.++|+|||++++++-
T Consensus 226 ~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 226 MRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp HHHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHHhCCCCCEEEEEeC
Confidence 6899999999999999999653
No 180
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.30 E-value=6e-12 Score=117.78 Aligned_cols=110 Identities=16% Similarity=0.170 Sum_probs=86.8
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..+++..+..+|+++|+|+.+++.|+.++..
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~--------------------------------- 242 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAA--------------------------------- 242 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 56799999999999999999987767999999999999999998765
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
.++ .+.+...|+.+. ..++||+|+|...+|+.. ....+....++.++.++|+|||.+++
T Consensus 243 ---------------~~~--~~~~~~~d~~~~---~~~~fD~Iv~~~~~~~g~-~~~~~~~~~~l~~~~~~LkpgG~l~i 301 (343)
T 2pjd_A 243 ---------------NGV--EGEVFASNVFSE---VKGRFDMIISNPPFHDGM-QTSLDAAQTLIRGAVRHLNSGGELRI 301 (343)
T ss_dssp ---------------TTC--CCEEEECSTTTT---CCSCEEEEEECCCCCSSS-HHHHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ---------------hCC--CCEEEEcccccc---ccCCeeEEEECCCcccCc-cCCHHHHHHHHHHHHHhCCCCcEEEE
Confidence 222 245677777653 357899999998876410 01125678999999999999999999
Q ss_pred eeCC
Q 047406 222 EPQP 225 (290)
Q Consensus 222 ~~~~ 225 (290)
....
T Consensus 302 ~~~~ 305 (343)
T 2pjd_A 302 VANA 305 (343)
T ss_dssp EEET
T ss_pred EEcC
Confidence 7543
No 181
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.29 E-value=4.4e-13 Score=117.93 Aligned_cols=104 Identities=20% Similarity=0.178 Sum_probs=83.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.|+.++..
T Consensus 77 ~~~~~vLD~gcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~-------------------------------- 122 (241)
T 3gdh_A 77 FKCDVVVDAFCGVGGNTIQFALT--GMRVIAIDIDPVKIALARNNAEV-------------------------------- 122 (241)
T ss_dssp SCCSEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred cCCCEEEECccccCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 47899999999999999999986 36999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+.+.|+.+. + +.++||+|++...+++.. .....+.++.++|+|||+++
T Consensus 123 ----------------~~~~~~~~~~~~d~~~~-~-~~~~~D~v~~~~~~~~~~------~~~~~~~~~~~~L~pgG~~i 178 (241)
T 3gdh_A 123 ----------------YGIADKIEFICGDFLLL-A-SFLKADVVFLSPPWGGPD------YATAETFDIRTMMSPDGFEI 178 (241)
T ss_dssp ----------------TTCGGGEEEEESCHHHH-G-GGCCCSEEEECCCCSSGG------GGGSSSBCTTTSCSSCHHHH
T ss_pred ----------------cCCCcCeEEEECChHHh-c-ccCCCCEEEECCCcCCcc------hhhhHHHHHHhhcCCcceeH
Confidence 33434689999998773 2 457899999988876543 22335667889999999977
Q ss_pred Ee
Q 047406 221 LE 222 (290)
Q Consensus 221 i~ 222 (290)
+.
T Consensus 179 ~~ 180 (241)
T 3gdh_A 179 FR 180 (241)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 182
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.29 E-value=9.5e-12 Score=115.08 Aligned_cols=104 Identities=14% Similarity=0.142 Sum_probs=83.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..++.+|||||||+|.++..+++..+ ..+|+++|+|+.+++.|+.++..
T Consensus 73 ~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~------------------------------ 122 (317)
T 1dl5_A 73 LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVER------------------------------ 122 (317)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH------------------------------
T ss_pred CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHH------------------------------
Confidence 35789999999999999999998866 35799999999999999998765
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
.++. ++.+...|+.+.. .+.++||+|++..+++++. ..+.++|+|||+
T Consensus 123 ------------------~g~~-~v~~~~~d~~~~~-~~~~~fD~Iv~~~~~~~~~------------~~~~~~LkpgG~ 170 (317)
T 1dl5_A 123 ------------------LGIE-NVIFVCGDGYYGV-PEFSPYDVIFVTVGVDEVP------------ETWFTQLKEGGR 170 (317)
T ss_dssp ------------------TTCC-SEEEEESCGGGCC-GGGCCEEEEEECSBBSCCC------------HHHHHHEEEEEE
T ss_pred ------------------cCCC-CeEEEECChhhcc-ccCCCeEEEEEcCCHHHHH------------HHHHHhcCCCcE
Confidence 2333 3889999987632 2347899999999886442 467889999999
Q ss_pred EEEeeCC
Q 047406 219 FVLEPQP 225 (290)
Q Consensus 219 l~i~~~~ 225 (290)
+++...+
T Consensus 171 lvi~~~~ 177 (317)
T 1dl5_A 171 VIVPINL 177 (317)
T ss_dssp EEEEBCB
T ss_pred EEEEECC
Confidence 9997654
No 183
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.29 E-value=1.1e-11 Score=106.81 Aligned_cols=104 Identities=21% Similarity=0.224 Sum_probs=82.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..++.+|||+|||+|.++..+++..+ ..+|+++|+|+.+++.|+.++...
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----------------------------- 125 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL----------------------------- 125 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-----------------------------
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-----------------------------
Confidence 35788999999999999999999873 369999999999999999876541
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
++ .++.+...|+....+ ..++||+|++..+++++. .++.++|+|||+
T Consensus 126 -------------------~~-~~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~~------------~~~~~~L~pgG~ 172 (215)
T 2yxe_A 126 -------------------GY-DNVIVIVGDGTLGYE-PLAPYDRIYTTAAGPKIP------------EPLIRQLKDGGK 172 (215)
T ss_dssp -------------------TC-TTEEEEESCGGGCCG-GGCCEEEEEESSBBSSCC------------HHHHHTEEEEEE
T ss_pred -------------------CC-CCeEEEECCcccCCC-CCCCeeEEEECCchHHHH------------HHHHHHcCCCcE
Confidence 12 247888888754322 246899999999886442 478999999999
Q ss_pred EEEeeCC
Q 047406 219 FVLEPQP 225 (290)
Q Consensus 219 l~i~~~~ 225 (290)
+++..++
T Consensus 173 lv~~~~~ 179 (215)
T 2yxe_A 173 LLMPVGR 179 (215)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9997654
No 184
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.29 E-value=8.1e-12 Score=115.39 Aligned_cols=114 Identities=20% Similarity=0.208 Sum_probs=82.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
+++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++.....
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~----------------------------- 132 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA----------------------------- 132 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHS-----------------------------
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhccc-----------------------------
Confidence 467899999999999999999876667999999999999999998654110
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG 217 (290)
..+ ..++.+...|..+.+....++||+|++.....+. ....+ ..++..+.++|+|||
T Consensus 133 ----------------~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~----~~~~l~~~~f~~~~~~~LkpgG 192 (294)
T 3adn_A 133 ----------------GSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIG----PGESLFTSAFYEGCKRCLNPGG 192 (294)
T ss_dssp ----------------SCTTCTTCCEECSCSCC---CCCCCEEEEEECC--------------CCHHHHHHHHHTEEEEE
T ss_pred ----------------ccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccC----cchhccHHHHHHHHHHhcCCCC
Confidence 001 2358889999877544456789999995443221 11222 689999999999999
Q ss_pred EEEEee
Q 047406 218 IFVLEP 223 (290)
Q Consensus 218 ~l~i~~ 223 (290)
++++..
T Consensus 193 ~lv~~~ 198 (294)
T 3adn_A 193 IFVAQN 198 (294)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999964
No 185
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.29 E-value=7.8e-12 Score=108.91 Aligned_cols=106 Identities=19% Similarity=0.248 Sum_probs=83.3
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcC-----CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCC
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFN-----CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDG 133 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~-----~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (290)
.+.++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|+.++...
T Consensus 77 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~------------------------ 132 (227)
T 2pbf_A 77 VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD------------------------ 132 (227)
T ss_dssp TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH------------------------
T ss_pred hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc------------------------
Confidence 456789999999999999999998763 458999999999999999987651
Q ss_pred cchhhhhHHHHHHhhhcCCCccccCc----CcceeEeecccccCCC---CCCCceeEEEEchhhhhhhhcCCchHHHHHH
Q 047406 134 LEKNVTAAQEEKKAISRNCSPAERNL----FDIVSFKQENFVHGRD---SPEKYYDAILCLSVTKWIHLNWGDDGLITLF 206 (290)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~~~~~d~~~~~~---~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l 206 (290)
++ ..++.+...|..+..+ ...++||+|++...+++ ++
T Consensus 133 ------------------------~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~------------~~ 176 (227)
T 2pbf_A 133 ------------------------KPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASE------------LP 176 (227)
T ss_dssp ------------------------CGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS------------CC
T ss_pred ------------------------CccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHH------------HH
Confidence 11 2358888888876320 23468999999877643 24
Q ss_pred HHHHhhcCCCcEEEEeeC
Q 047406 207 MRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 207 ~~~~~~LkpgG~l~i~~~ 224 (290)
..+.++|+|||++++..+
T Consensus 177 ~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 177 EILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEEc
Confidence 778999999999999754
No 186
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.28 E-value=6.9e-12 Score=109.25 Aligned_cols=109 Identities=17% Similarity=0.298 Sum_probs=85.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|..+..+++.++ ..+|+++|+|+.+++.|+.++..
T Consensus 68 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~------------------------------- 116 (229)
T 2avd_A 68 IQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQ------------------------------- 116 (229)
T ss_dssp TTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHH-------------------------------
T ss_pred cCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 5778999999999999999998766 56999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCC---C--CCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS---P--EKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~--~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.++..++.+...|+.+..+. . .++||+|++... ......++.++.++|+
T Consensus 117 -----------------~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---------~~~~~~~l~~~~~~L~ 170 (229)
T 2avd_A 117 -----------------AEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---------KENCSAYYERCLQLLR 170 (229)
T ss_dssp -----------------TTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---------STTHHHHHHHHHHHEE
T ss_pred -----------------CCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---------HHHHHHHHHHHHHHcC
Confidence 33344688888887552111 1 168999998543 2456788999999999
Q ss_pred CCcEEEEeeCCC
Q 047406 215 PGGIFVLEPQPW 226 (290)
Q Consensus 215 pgG~l~i~~~~~ 226 (290)
|||++++....|
T Consensus 171 pgG~lv~~~~~~ 182 (229)
T 2avd_A 171 PGGILAVLRVLW 182 (229)
T ss_dssp EEEEEEEECCSG
T ss_pred CCeEEEEECCCc
Confidence 999999965544
No 187
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.27 E-value=1.7e-11 Score=114.28 Aligned_cols=108 Identities=19% Similarity=0.307 Sum_probs=84.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..++.+|||||||+|.++..+++. +..+|+|+|+| .+++.|++++..
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s-~~~~~a~~~~~~------------------------------- 82 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMS-SIIEMAKELVEL------------------------------- 82 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESS-THHHHHHHHHHH-------------------------------
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChH-HHHHHHHHHHHH-------------------------------
Confidence 357899999999999999988875 55689999999 589999887665
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++.+++.+...|+.+ .+.+.++||+|+|..+...+. ....+..++..+.++|+|||++
T Consensus 83 -----------------~~~~~~i~~~~~d~~~-~~~~~~~~D~Ivs~~~~~~l~---~~~~~~~~l~~~~~~LkpgG~l 141 (328)
T 1g6q_1 83 -----------------NGFSDKITLLRGKLED-VHLPFPKVDIIISEWMGYFLL---YESMMDTVLYARDHYLVEGGLI 141 (328)
T ss_dssp -----------------TTCTTTEEEEESCTTT-SCCSSSCEEEEEECCCBTTBS---TTCCHHHHHHHHHHHEEEEEEE
T ss_pred -----------------cCCCCCEEEEECchhh-ccCCCCcccEEEEeCchhhcc---cHHHHHHHHHHHHhhcCCCeEE
Confidence 4455568999999876 455557899999975432221 2345678999999999999999
Q ss_pred EE
Q 047406 220 VL 221 (290)
Q Consensus 220 ~i 221 (290)
+.
T Consensus 142 i~ 143 (328)
T 1g6q_1 142 FP 143 (328)
T ss_dssp ES
T ss_pred EE
Confidence 84
No 188
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.27 E-value=1e-11 Score=114.47 Aligned_cols=117 Identities=15% Similarity=0.084 Sum_probs=83.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
..+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++....
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~------------------------------ 138 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTS------------------------------ 138 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHH------------------------------
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhc------------------------------
Confidence 45689999999999999999887666799999999999999998764310
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
..+ ..++.+...|..+..+...++||+|++.....|.... ..-....++.++.++|+|||++
T Consensus 139 ----------------~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~-~~l~~~~~l~~~~~~LkpgG~l 201 (296)
T 1inl_A 139 ----------------CGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQG-GHLFTEEFYQACYDALKEDGVF 201 (296)
T ss_dssp ----------------GGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC-----------CCSHHHHHHHHHHEEEEEEE
T ss_pred ----------------cccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCch-hhhhHHHHHHHHHHhcCCCcEE
Confidence 011 2358888888765333345789999985433222110 0001268899999999999999
Q ss_pred EEeeC
Q 047406 220 VLEPQ 224 (290)
Q Consensus 220 ~i~~~ 224 (290)
++...
T Consensus 202 v~~~~ 206 (296)
T 1inl_A 202 SAETE 206 (296)
T ss_dssp EEECC
T ss_pred EEEcc
Confidence 99743
No 189
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.27 E-value=1.2e-11 Score=107.83 Aligned_cols=99 Identities=22% Similarity=0.321 Sum_probs=80.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++... .+|+++|+|+.+++.|+.++..
T Consensus 69 ~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 114 (231)
T 1vbf_A 69 HKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSY-------------------------------- 114 (231)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTT--------------------------------
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhh--------------------------------
Confidence 577899999999999999999874 5899999999999999886543
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.+ ++.+...|+.+..+ ..++||+|++..+++++. ..+.++|+|||+++
T Consensus 115 ----------------~~---~v~~~~~d~~~~~~-~~~~fD~v~~~~~~~~~~------------~~~~~~L~pgG~l~ 162 (231)
T 1vbf_A 115 ----------------YN---NIKLILGDGTLGYE-EEKPYDRVVVWATAPTLL------------CKPYEQLKEGGIMI 162 (231)
T ss_dssp ----------------CS---SEEEEESCGGGCCG-GGCCEEEEEESSBBSSCC------------HHHHHTEEEEEEEE
T ss_pred ----------------cC---CeEEEECCcccccc-cCCCccEEEECCcHHHHH------------HHHHHHcCCCcEEE
Confidence 11 58888888876322 357899999999886442 36889999999999
Q ss_pred EeeCC
Q 047406 221 LEPQP 225 (290)
Q Consensus 221 i~~~~ 225 (290)
+..++
T Consensus 163 ~~~~~ 167 (231)
T 1vbf_A 163 LPIGV 167 (231)
T ss_dssp EEECS
T ss_pred EEEcC
Confidence 97764
No 190
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.27 E-value=7.1e-12 Score=110.73 Aligned_cols=109 Identities=21% Similarity=0.268 Sum_probs=85.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|..+..++..++ ..+|+++|+|+.+++.|+.++..
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~------------------------------- 119 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQK------------------------------- 119 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 4678999999999999999999876 56999999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccC---CCCCC--CceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHG---RDSPE--KYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLR 214 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~~--~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lk 214 (290)
.++...+.+...|..+. ++... ++||+|++.... .....++.++.++|+
T Consensus 120 -----------------~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~---------~~~~~~l~~~~~~Lk 173 (232)
T 3cbg_A 120 -----------------AGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADK---------RNYPRYYEIGLNLLR 173 (232)
T ss_dssp -----------------HTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCG---------GGHHHHHHHHHHTEE
T ss_pred -----------------cCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCH---------HHHHHHHHHHHHHcC
Confidence 23334588888886542 11122 689999975442 456788999999999
Q ss_pred CCcEEEEeeCCC
Q 047406 215 PGGIFVLEPQPW 226 (290)
Q Consensus 215 pgG~l~i~~~~~ 226 (290)
|||++++....|
T Consensus 174 pgG~lv~~~~~~ 185 (232)
T 3cbg_A 174 RGGLMVIDNVLW 185 (232)
T ss_dssp EEEEEEEECTTG
T ss_pred CCeEEEEeCCCc
Confidence 999999976544
No 191
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.26 E-value=1.2e-11 Score=108.27 Aligned_cols=110 Identities=20% Similarity=0.212 Sum_probs=82.9
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCC------ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccC
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNC------RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGD 132 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~------~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
.+.++.+|||+|||+|.++..+++..+. .+|+++|+++.+++.|+.++...+..
T Consensus 81 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~-------------------- 140 (227)
T 1r18_A 81 HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRS-------------------- 140 (227)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHH--------------------
T ss_pred hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCcc--------------------
Confidence 4567899999999999999999986653 58999999999999999887652100
Q ss_pred CcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhh
Q 047406 133 GLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~ 212 (290)
.-...++.+...|..+..+ ..++||+|++...++++ ..++.+.
T Consensus 141 ------------------------~~~~~~v~~~~~d~~~~~~-~~~~fD~I~~~~~~~~~------------~~~~~~~ 183 (227)
T 1r18_A 141 ------------------------MLDSGQLLIVEGDGRKGYP-PNAPYNAIHVGAAAPDT------------PTELINQ 183 (227)
T ss_dssp ------------------------HHHHTSEEEEESCGGGCCG-GGCSEEEEEECSCBSSC------------CHHHHHT
T ss_pred ------------------------ccCCCceEEEECCcccCCC-cCCCccEEEECCchHHH------------HHHHHHH
Confidence 0001257888888876322 13689999998887543 2678999
Q ss_pred cCCCcEEEEeeCC
Q 047406 213 LRPGGIFVLEPQP 225 (290)
Q Consensus 213 LkpgG~l~i~~~~ 225 (290)
|+|||++++...+
T Consensus 184 LkpgG~lvi~~~~ 196 (227)
T 1r18_A 184 LASGGRLIVPVGP 196 (227)
T ss_dssp EEEEEEEEEEESC
T ss_pred hcCCCEEEEEEec
Confidence 9999999997653
No 192
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.25 E-value=2.7e-12 Score=114.58 Aligned_cols=44 Identities=30% Similarity=0.522 Sum_probs=37.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~ 105 (290)
.++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.|..+
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~a~~~ 79 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAWKIRS 79 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCHHHHT
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHHHHHh
Confidence 45789999999999999999887 445999999999999987663
No 193
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.25 E-value=2e-11 Score=118.76 Aligned_cols=108 Identities=17% Similarity=0.183 Sum_probs=81.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHH-------HHHHHHHHHhhhhhhhhhhhchhhhhhccC
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADA-------YWHLRKIVRTEHNEKRRANASRVEVIEKGD 132 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
+.++.+|||||||+|.++..+|+..++.+|+|+|+++.+++.| +.++..
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~------------------------ 295 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKL------------------------ 295 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHH------------------------
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHH------------------------
Confidence 3578999999999999999999987777899999999999999 443332
Q ss_pred CcchhhhhHHHHHHhhhcCCCccccCcC-cceeEeeccccc-CCC--CCCCceeEEEEchhhhhhhhcCCchHHHHHHHH
Q 047406 133 GLEKNVTAAQEEKKAISRNCSPAERNLF-DIVSFKQENFVH-GRD--SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMR 208 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~-~~~--~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~ 208 (290)
.++. .++.+..+|... ..+ ...++||+|++.+++ + .+++...+.+
T Consensus 296 ------------------------~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l--~-----~~d~~~~L~e 344 (433)
T 1u2z_A 296 ------------------------YGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL--F-----DEDLNKKVEK 344 (433)
T ss_dssp ------------------------TTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT--C-----CHHHHHHHHH
T ss_pred ------------------------cCCCCCceEEEEcCccccccccccccCCCCEEEEeCcc--c-----cccHHHHHHH
Confidence 2221 357787764332 111 123689999987665 1 1567788999
Q ss_pred HHhhcCCCcEEEEe
Q 047406 209 IWKLLRPGGIFVLE 222 (290)
Q Consensus 209 ~~~~LkpgG~l~i~ 222 (290)
+.+.|+|||.+++.
T Consensus 345 l~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 345 ILQTAKVGCKIISL 358 (433)
T ss_dssp HHTTCCTTCEEEES
T ss_pred HHHhCCCCeEEEEe
Confidence 99999999999995
No 194
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=2.4e-11 Score=110.40 Aligned_cols=106 Identities=12% Similarity=0.072 Sum_probs=86.2
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchh
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKN 137 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (290)
..+.++.+|||+|||+|.+++.+|+..+..+|+|+|+|+.+++.|+.++..
T Consensus 115 ~~~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~----------------------------- 165 (272)
T 3a27_A 115 FISNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKL----------------------------- 165 (272)
T ss_dssp TSCCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHH-----------------------------
T ss_pred HhcCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH-----------------------------
Confidence 345678999999999999999999986666999999999999999998876
Q ss_pred hhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 138 VTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
+++. ++.+...|+.+. +. .+.||+|++.... +...++..+.+.|+|||
T Consensus 166 -------------------n~l~-~~~~~~~d~~~~-~~-~~~~D~Vi~d~p~----------~~~~~l~~~~~~LkpgG 213 (272)
T 3a27_A 166 -------------------NKLN-NVIPILADNRDV-EL-KDVADRVIMGYVH----------KTHKFLDKTFEFLKDRG 213 (272)
T ss_dssp -------------------TTCS-SEEEEESCGGGC-CC-TTCEEEEEECCCS----------SGGGGHHHHHHHEEEEE
T ss_pred -------------------cCCC-CEEEEECChHHc-Cc-cCCceEEEECCcc----------cHHHHHHHHHHHcCCCC
Confidence 3333 477999998774 33 5689999986442 34567888999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
+++++..
T Consensus 214 ~l~~s~~ 220 (272)
T 3a27_A 214 VIHYHET 220 (272)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999653
No 195
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.25 E-value=2.2e-11 Score=107.18 Aligned_cols=103 Identities=19% Similarity=0.215 Sum_probs=81.1
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|.++..+++..+ .+|+++|+|+.+++.|+.++..
T Consensus 89 ~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~------------------------------- 136 (235)
T 1jg1_A 89 LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLER------------------------------- 136 (235)
T ss_dssp CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHH-------------------------------
Confidence 35788999999999999999999876 6899999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++. ++.+...|+....+ ...+||+|++..+++++. .++.+.|+|||++
T Consensus 137 -----------------~~~~-~v~~~~~d~~~~~~-~~~~fD~Ii~~~~~~~~~------------~~~~~~L~pgG~l 185 (235)
T 1jg1_A 137 -----------------AGVK-NVHVILGDGSKGFP-PKAPYDVIIVTAGAPKIP------------EPLIEQLKIGGKL 185 (235)
T ss_dssp -----------------TTCC-SEEEEESCGGGCCG-GGCCEEEEEECSBBSSCC------------HHHHHTEEEEEEE
T ss_pred -----------------cCCC-CcEEEECCcccCCC-CCCCccEEEECCcHHHHH------------HHHHHhcCCCcEE
Confidence 2222 37888888733221 124599999988875431 3688999999999
Q ss_pred EEeeCC
Q 047406 220 VLEPQP 225 (290)
Q Consensus 220 ~i~~~~ 225 (290)
++..++
T Consensus 186 vi~~~~ 191 (235)
T 1jg1_A 186 IIPVGS 191 (235)
T ss_dssp EEEECS
T ss_pred EEEEec
Confidence 997764
No 196
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.24 E-value=1.5e-10 Score=109.57 Aligned_cols=107 Identities=11% Similarity=0.012 Sum_probs=84.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+| |+|.++..++...+..+|+++|+|+.+++.|++++..
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~-------------------------------- 217 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANE-------------------------------- 217 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 3688999999 9999999998876556999999999999999998876
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCC-CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc-E
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS-PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG-I 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG-~ 218 (290)
.++. ++.+...|+.+.++. ..+.||+|++....++. +...++.++.++|+||| +
T Consensus 218 ----------------~g~~-~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~-------~~~~~l~~~~~~LkpgG~~ 273 (373)
T 2qm3_A 218 ----------------IGYE-DIEIFTFDLRKPLPDYALHKFDTFITDPPETLE-------AIRAFVGRGIATLKGPRCA 273 (373)
T ss_dssp ----------------HTCC-CEEEECCCTTSCCCTTTSSCBSEEEECCCSSHH-------HHHHHHHHHHHTBCSTTCE
T ss_pred ----------------cCCC-CEEEEEChhhhhchhhccCCccEEEECCCCchH-------HHHHHHHHHHHHcccCCeE
Confidence 2333 589999998774442 34689999997654322 35889999999999999 4
Q ss_pred EEEeeC
Q 047406 219 FVLEPQ 224 (290)
Q Consensus 219 l~i~~~ 224 (290)
++++..
T Consensus 274 ~~~~~~ 279 (373)
T 2qm3_A 274 GYFGIT 279 (373)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 466543
No 197
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.24 E-value=5.2e-11 Score=106.85 Aligned_cols=107 Identities=14% Similarity=0.241 Sum_probs=83.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+.++.+|||+|||+|.++..++... +..+|+++|+|+.+++.|+.++....
T Consensus 97 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---------------------------- 148 (280)
T 1i9g_A 97 IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCY---------------------------- 148 (280)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHH----------------------------
T ss_pred CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhc----------------------------
Confidence 4678899999999999999999864 45699999999999999999876510
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
..+..++.+...|+.+. +.+.+.||+|++... +...++.++.++|+|||+
T Consensus 149 ------------------g~~~~~v~~~~~d~~~~-~~~~~~~D~v~~~~~-----------~~~~~l~~~~~~L~pgG~ 198 (280)
T 1i9g_A 149 ------------------GQPPDNWRLVVSDLADS-ELPDGSVDRAVLDML-----------APWEVLDAVSRLLVAGGV 198 (280)
T ss_dssp ------------------TSCCTTEEEECSCGGGC-CCCTTCEEEEEEESS-----------CGGGGHHHHHHHEEEEEE
T ss_pred ------------------CCCCCcEEEEECchHhc-CCCCCceeEEEECCc-----------CHHHHHHHHHHhCCCCCE
Confidence 01234688889998763 445678999998321 234678999999999999
Q ss_pred EEEeeC
Q 047406 219 FVLEPQ 224 (290)
Q Consensus 219 l~i~~~ 224 (290)
+++..+
T Consensus 199 l~~~~~ 204 (280)
T 1i9g_A 199 LMVYVA 204 (280)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 999765
No 198
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.24 E-value=2.4e-11 Score=114.08 Aligned_cols=107 Identities=22% Similarity=0.361 Sum_probs=83.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++. +..+|+|+|+|+ +++.|+.++..
T Consensus 49 ~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~-~~~~a~~~~~~-------------------------------- 94 (348)
T 2y1w_A 49 FKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEAST-MAQHAEVLVKS-------------------------------- 94 (348)
T ss_dssp TTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECST-HHHHHHHHHHH--------------------------------
T ss_pred CCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHH-HHHHHHHHHHH--------------------------------
Confidence 57899999999999999998875 556999999996 77888877654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++.+++.+...|+.+ .+.+ ++||+|+|..+.+++ ..+.....+.++.++|+|||+++
T Consensus 95 ----------------~~l~~~v~~~~~d~~~-~~~~-~~~D~Ivs~~~~~~~----~~~~~~~~l~~~~~~LkpgG~li 152 (348)
T 2y1w_A 95 ----------------NNLTDRIVVIPGKVEE-VSLP-EQVDIIISEPMGYML----FNERMLESYLHAKKYLKPSGNMF 152 (348)
T ss_dssp ----------------TTCTTTEEEEESCTTT-CCCS-SCEEEEEECCCBTTB----TTTSHHHHHHHGGGGEEEEEEEE
T ss_pred ----------------cCCCCcEEEEEcchhh-CCCC-CceeEEEEeCchhcC----ChHHHHHHHHHHHhhcCCCeEEE
Confidence 3444578999999876 3333 689999998765322 23556778888999999999999
Q ss_pred Eee
Q 047406 221 LEP 223 (290)
Q Consensus 221 i~~ 223 (290)
+..
T Consensus 153 ~~~ 155 (348)
T 2y1w_A 153 PTI 155 (348)
T ss_dssp SCE
T ss_pred Eec
Confidence 753
No 199
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.24 E-value=1.5e-11 Score=113.97 Aligned_cols=137 Identities=11% Similarity=0.113 Sum_probs=91.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
..+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++....
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~------------------------------ 143 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMA------------------------------ 143 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH------------------------------
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhh------------------------------
Confidence 46789999999999999999987666799999999999999998765310
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++ ..++.+...|..+.++...++||+|++....++.. . .......++.++.++|+|||++
T Consensus 144 ----------------~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~-~-~~l~~~~~l~~~~~~LkpgG~l 205 (304)
T 2o07_A 144 ----------------IGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGP-A-ESLFKESYYQLMKTALKEDGVL 205 (304)
T ss_dssp ----------------GGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC-------------CHHHHHHHHHEEEEEEE
T ss_pred ----------------cccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCc-c-hhhhHHHHHHHHHhccCCCeEE
Confidence 111 23588888887653333457899999854432110 0 0011257899999999999999
Q ss_pred EEee-CCCchhhhhhhhhhhhhccccc
Q 047406 220 VLEP-QPWVSYEKNRRVSETTATNFQN 245 (290)
Q Consensus 220 ~i~~-~~~~~~~~~~~~~~~~~~~~~~ 245 (290)
++.. .+|........+...+...|.+
T Consensus 206 v~~~~~~~~~~~~~~~~~~~l~~~f~~ 232 (304)
T 2o07_A 206 CCQGECQWLHLDLIKEMRQFCQSLFPV 232 (304)
T ss_dssp EEEEECTTTCHHHHHHHHHHHHHHCSE
T ss_pred EEecCCcccchHHHHHHHHHHHHhCCC
Confidence 9975 4554332223333334433433
No 200
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.23 E-value=2e-11 Score=111.36 Aligned_cols=114 Identities=20% Similarity=0.186 Sum_probs=84.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
+.+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++....
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~------------------------------ 123 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIA------------------------------ 123 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHH------------------------------
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhc------------------------------
Confidence 46789999999999999999886566799999999999999999764310
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchH--HHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDG--LITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~--~~~~l~~~~~~LkpgG 217 (290)
.++ ..++.+...|..+.++...++||+|++....++. .... ...++..+.++|+|||
T Consensus 124 ----------------~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~----~~~~l~~~~~~~~~~~~L~pgG 183 (275)
T 1iy9_A 124 ----------------GKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVG----PAVNLFTKGFYAGIAKALKEDG 183 (275)
T ss_dssp ----------------TTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCS----CCCCCSTTHHHHHHHHHEEEEE
T ss_pred ----------------cccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCC----cchhhhHHHHHHHHHHhcCCCc
Confidence 011 2368899999766333345789999995432211 1111 2578999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
++++...
T Consensus 184 ~lv~~~~ 190 (275)
T 1iy9_A 184 IFVAQTD 190 (275)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9999753
No 201
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.23 E-value=9.7e-11 Score=111.11 Aligned_cols=133 Identities=19% Similarity=0.206 Sum_probs=94.0
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|.+++.++...+..+|+|+|+|+.+++.|+.++..
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~------------------------------- 263 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALA------------------------------- 263 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHH-------------------------------
Confidence 6788999999999999999998875444899999999999999999876
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhh-hhhcCCchH-HHHHHHHHHhhcCCCc
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKW-IHLNWGDDG-LITLFMRIWKLLRPGG 217 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~-~~l~~~~~~-~~~~l~~~~~~LkpgG 217 (290)
.++.+.+.+.+.|+.+ ++.+.++||+|+|+..... +.-...... ...++..+.++| +|+
T Consensus 264 -----------------~gl~~~i~~~~~D~~~-~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~ 324 (373)
T 3tm4_A 264 -----------------AGVLDKIKFIQGDATQ-LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKR 324 (373)
T ss_dssp -----------------TTCGGGCEEEECCGGG-GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEE
T ss_pred -----------------cCCCCceEEEECChhh-CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCe
Confidence 3444568999999977 4555678999999644210 000000112 267888888888 444
Q ss_pred EEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEe
Q 047406 218 IFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVED 268 (290)
Q Consensus 218 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~ 268 (290)
.+++.. .++.+.+ .+.+.||+..+.
T Consensus 325 ~~~i~~-------------------------~~~~~~~-~~~~~G~~~~~~ 349 (373)
T 3tm4_A 325 GVFITT-------------------------EKKAIEE-AIAENGFEIIHH 349 (373)
T ss_dssp EEEEES-------------------------CHHHHHH-HHHHTTEEEEEE
T ss_pred EEEEEC-------------------------CHHHHHH-HHHHcCCEEEEE
Confidence 444432 1233433 678899997764
No 202
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.22 E-value=1.6e-11 Score=104.68 Aligned_cols=37 Identities=32% Similarity=0.424 Sum_probs=33.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDS 96 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~ 96 (290)
+.++.+|||+|||+|.++..+++.++ ..+|+|+|+|+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 58 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKI 58 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCc
Confidence 45788999999999999999999877 57999999998
No 203
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.22 E-value=6e-11 Score=121.61 Aligned_cols=117 Identities=20% Similarity=0.199 Sum_probs=88.5
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
...+|.+|||+|||+|.+++.++.. +..+|+++|+|+.+++.|+.++..
T Consensus 536 ~~~~g~~VLDlg~GtG~~sl~aa~~-ga~~V~aVD~s~~al~~a~~N~~~------------------------------ 584 (703)
T 3v97_A 536 QMSKGKDFLNLFSYTGSATVHAGLG-GARSTTTVDMSRTYLEWAERNLRL------------------------------ 584 (703)
T ss_dssp HHCTTCEEEEESCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHH------------------------------
T ss_pred HhcCCCcEEEeeechhHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHH------------------------------
Confidence 3468999999999999999998774 455799999999999999999876
Q ss_pred hhHHHHHHhhhcCCCccccCcC-cceeEeecccccCCCCCCCceeEEEEchhhh-----hhhhcCCchHHHHHHHHHHhh
Q 047406 139 TAAQEEKKAISRNCSPAERNLF-DIVSFKQENFVHGRDSPEKYYDAILCLSVTK-----WIHLNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~-----~~~l~~~~~~~~~~l~~~~~~ 212 (290)
+++. .++.+.+.|..+.++...++||+|++..-.. .....-...+...++..+.++
T Consensus 585 ------------------ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~ 646 (703)
T 3v97_A 585 ------------------NGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRL 646 (703)
T ss_dssp ------------------TTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHH
T ss_pred ------------------cCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHh
Confidence 4444 4689999998763333457899999853210 000000124667899999999
Q ss_pred cCCCcEEEEeeC
Q 047406 213 LRPGGIFVLEPQ 224 (290)
Q Consensus 213 LkpgG~l~i~~~ 224 (290)
|+|||+|+++..
T Consensus 647 LkpgG~L~~s~~ 658 (703)
T 3v97_A 647 LRAGGTIMFSNN 658 (703)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCCCcEEEEEEC
Confidence 999999999765
No 204
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.21 E-value=1.2e-10 Score=102.23 Aligned_cols=102 Identities=19% Similarity=0.185 Sum_probs=82.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+|+++|+|+.+++.|+.+...
T Consensus 90 ~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 135 (248)
T 2yvl_A 90 NKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKK-------------------------------- 135 (248)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHH--------------------------------
Confidence 47889999999999999999987 56999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++..++.+...|+.+.. .+...||+|++.. .+...++.++.++|+|||.++
T Consensus 136 ----------------~~~~~~~~~~~~d~~~~~-~~~~~~D~v~~~~-----------~~~~~~l~~~~~~L~~gG~l~ 187 (248)
T 2yvl_A 136 ----------------FNLGKNVKFFNVDFKDAE-VPEGIFHAAFVDV-----------REPWHYLEKVHKSLMEGAPVG 187 (248)
T ss_dssp ----------------TTCCTTEEEECSCTTTSC-CCTTCBSEEEECS-----------SCGGGGHHHHHHHBCTTCEEE
T ss_pred ----------------cCCCCcEEEEEcChhhcc-cCCCcccEEEECC-----------cCHHHHHHHHHHHcCCCCEEE
Confidence 233346888888887632 1346899999732 233567899999999999999
Q ss_pred EeeC
Q 047406 221 LEPQ 224 (290)
Q Consensus 221 i~~~ 224 (290)
+..+
T Consensus 188 ~~~~ 191 (248)
T 2yvl_A 188 FLLP 191 (248)
T ss_dssp EEES
T ss_pred EEeC
Confidence 9776
No 205
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.20 E-value=2.1e-11 Score=111.50 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=84.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
+++.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++....
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~------------------------------ 126 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNIS------------------------------ 126 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTS------------------------------
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhc------------------------------
Confidence 46789999999999999999887666799999999999999998653200
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG 217 (290)
.++ ..++.+...|..+..+...++||+|++.....+.. ...+ ..++..+.++|+|||
T Consensus 127 ----------------~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~----~~~l~~~~~l~~~~~~L~pgG 186 (283)
T 2i7c_A 127 ----------------CGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGP----AETLFNQNFYEKIYNALKPNG 186 (283)
T ss_dssp ----------------GGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTG----GGGGSSHHHHHHHHHHEEEEE
T ss_pred ----------------cccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCc----chhhhHHHHHHHHHHhcCCCc
Confidence 011 23588888887653222357899999954432211 1233 689999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
++++...
T Consensus 187 ~lv~~~~ 193 (283)
T 2i7c_A 187 YCVAQCE 193 (283)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999754
No 206
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.20 E-value=6.5e-11 Score=107.38 Aligned_cols=114 Identities=18% Similarity=0.139 Sum_probs=84.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCC-ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNC-RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~-~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|..+..+++.++. .+|+++|+|+.+++.++.++..
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~------------------------------- 130 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINR------------------------------- 130 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHH-------------------------------
Confidence 57899999999999999999987765 6999999999999999998775
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCC----CCCceeEEEEchhhhh---hh--hcCC-------chHHH
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS----PEKYYDAILCLSVTKW---IH--LNWG-------DDGLI 203 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~----~~~~fD~I~~~~vl~~---~~--l~~~-------~~~~~ 203 (290)
.++. ++.+...|+.+. +. ..+.||+|++...... ++ -.|. ...+.
T Consensus 131 -----------------~g~~-~v~~~~~D~~~~-~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~ 191 (274)
T 3ajd_A 131 -----------------MGVL-NTIIINADMRKY-KDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQK 191 (274)
T ss_dssp -----------------TTCC-SEEEEESCHHHH-HHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHH
T ss_pred -----------------hCCC-cEEEEeCChHhc-chhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHH
Confidence 2232 578888887652 11 2468999998622110 00 0000 13457
Q ss_pred HHHHHHHhhcCCCcEEEEeeC
Q 047406 204 TLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 204 ~~l~~~~~~LkpgG~l~i~~~ 224 (290)
.++..+.++|+|||+++++..
T Consensus 192 ~~l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 192 ELIDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp HHHHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEEEEC
Confidence 899999999999999999754
No 207
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.20 E-value=1.8e-11 Score=114.22 Aligned_cols=114 Identities=19% Similarity=0.197 Sum_probs=84.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++...
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~------------------------------- 163 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNI------------------------------- 163 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTT-------------------------------
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhh-------------------------------
Confidence 4678999999999999999988766679999999999999999865320
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG 217 (290)
..++ ..++.+...|..+..+...++||+|++.....+- ....+ ..++.++.++|+|||
T Consensus 164 ---------------~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~----~~~~l~~~~~l~~~~~~LkpgG 224 (321)
T 2pt6_A 164 ---------------SCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIG----PAETLFNQNFYEKIYNALKPNG 224 (321)
T ss_dssp ---------------SGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSS----GGGGGSSHHHHHHHHHHEEEEE
T ss_pred ---------------ccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCC----cchhhhHHHHHHHHHHhcCCCc
Confidence 0011 2358899998765322235789999986432211 01222 689999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
++++...
T Consensus 225 ~lv~~~~ 231 (321)
T 2pt6_A 225 YCVAQCE 231 (321)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9999753
No 208
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.20 E-value=3.3e-11 Score=113.26 Aligned_cols=118 Identities=20% Similarity=0.198 Sum_probs=86.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
..+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++....
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~------------------------------ 168 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVA------------------------------ 168 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHH------------------------------
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhc------------------------------
Confidence 46689999999999999999987666799999999999999999765410
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCC-CCCCceeEEEEchhhhhhhhcCCchH--HHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRD-SPEKYYDAILCLSVTKWIHLNWGDDG--LITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~~~~l~~~~~~--~~~~l~~~~~~Lkpg 216 (290)
.++ ..++.+...|+.+.++ .+.++||+|++.....+.+ .+. ...++.++.++|+||
T Consensus 169 ----------------~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~----~~~l~~~~~l~~~~~~Lkpg 228 (334)
T 1xj5_A 169 ----------------IGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGP----AKELFEKPFFQSVARALRPG 228 (334)
T ss_dssp ----------------GGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSG----GGGGGSHHHHHHHHHHEEEE
T ss_pred ----------------cccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCc----chhhhHHHHHHHHHHhcCCC
Confidence 011 2358899999765322 2347899999954422111 112 378999999999999
Q ss_pred cEEEEe-eCCCch
Q 047406 217 GIFVLE-PQPWVS 228 (290)
Q Consensus 217 G~l~i~-~~~~~~ 228 (290)
|++++. ..+|..
T Consensus 229 G~lv~~~~~~~~~ 241 (334)
T 1xj5_A 229 GVVCTQAESLWLH 241 (334)
T ss_dssp EEEEEECCCTTTC
T ss_pred cEEEEecCCcccc
Confidence 999996 444543
No 209
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.19 E-value=1.7e-11 Score=114.27 Aligned_cols=114 Identities=15% Similarity=0.116 Sum_probs=81.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
..+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++...
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~------------------------------- 155 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGM------------------------------- 155 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTT-------------------------------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHh-------------------------------
Confidence 4568999999999999999998766679999999999999999865320
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG 217 (290)
..++ ..++.+...|..+.++...++||+|++....++ . ....+ ..++.++.++|+|||
T Consensus 156 ---------------~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~-~---~~~~l~t~~~l~~~~~~LkpgG 216 (314)
T 2b2c_A 156 ---------------SCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPV-G---PAESLFGQSYYELLRDALKEDG 216 (314)
T ss_dssp ---------------SGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-----------------HHHHHHHHEEEEE
T ss_pred ---------------ccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCC-C---cchhhhHHHHHHHHHhhcCCCe
Confidence 0011 235888888876532224578999998553221 1 11222 689999999999999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
++++...
T Consensus 217 ~lv~~~~ 223 (314)
T 2b2c_A 217 ILSSQGE 223 (314)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999753
No 210
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.19 E-value=5.7e-11 Score=111.43 Aligned_cols=114 Identities=13% Similarity=0.016 Sum_probs=82.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.+++.++.. +. +|+++|+|+.+++.|+.++..
T Consensus 152 ~~~~~VLDlgcGtG~~sl~la~~-ga-~V~~VD~s~~al~~a~~n~~~-------------------------------- 197 (332)
T 2igt_A 152 DRPLKVLNLFGYTGVASLVAAAA-GA-EVTHVDASKKAIGWAKENQVL-------------------------------- 197 (332)
T ss_dssp SSCCEEEEETCTTCHHHHHHHHT-TC-EEEEECSCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCcEEEcccccCHHHHHHHHc-CC-EEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 36789999999999999998885 33 999999999999999998876
Q ss_pred HHHHHHhhhcCCCccccCcCc-ceeEeecccccCCCC---CCCceeEEEEchhhhhhh----hcCCchHHHHHHHHHHhh
Q 047406 141 AQEEKKAISRNCSPAERNLFD-IVSFKQENFVHGRDS---PEKYYDAILCLSVTKWIH----LNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~~~~----l~~~~~~~~~~l~~~~~~ 212 (290)
.++.. .+.+.+.|+.+..+. ....||+|++..-..-.. +.-..++...++..+.++
T Consensus 198 ----------------~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~ 261 (332)
T 2igt_A 198 ----------------AGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREI 261 (332)
T ss_dssp ----------------HTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHT
T ss_pred ----------------cCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHh
Confidence 23332 488898887663211 146899999942210000 000014567899999999
Q ss_pred cCCCcEEEEeeC
Q 047406 213 LRPGGIFVLEPQ 224 (290)
Q Consensus 213 LkpgG~l~i~~~ 224 (290)
|+|||++++...
T Consensus 262 LkpgG~lli~~~ 273 (332)
T 2igt_A 262 LSPKALGLVLTA 273 (332)
T ss_dssp BCTTCCEEEEEE
T ss_pred cCcCcEEEEEEC
Confidence 999999888643
No 211
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.19 E-value=5.7e-11 Score=109.23 Aligned_cols=149 Identities=18% Similarity=0.236 Sum_probs=94.1
Q ss_pred CcEEEecCCC--ChhhHHHHh-HcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 64 KDCLDIGCNS--GIITIQIAQ-KFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 64 ~~vLDiGcG~--G~~~~~la~-~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++||||||. +..+..+++ ..|..+|+++|.|+.+++.|+..+..
T Consensus 80 ~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~-------------------------------- 127 (277)
T 3giw_A 80 RQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAS-------------------------------- 127 (277)
T ss_dssp CEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCC--------------------------------
T ss_pred CEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhcc--------------------------------
Confidence 5899999997 334444454 45778999999999999999886432
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccC---CCCC--CCcee-----EEEEchhhhhhhhcCCchHHHHHHHHHH
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHG---RDSP--EKYYD-----AILCLSVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~---~~~~--~~~fD-----~I~~~~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
. ...++.|.+.|+.+. +..+ ...|| .|+++.+|||+. +.+....++.++.
T Consensus 128 ----------------~-~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~---d~~~p~~~l~~l~ 187 (277)
T 3giw_A 128 ----------------T-PEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVL---DEDDAVGIVRRLL 187 (277)
T ss_dssp ----------------C-SSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSC---GGGCHHHHHHHHH
T ss_pred ----------------C-CCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCC---chhhHHHHHHHHH
Confidence 1 123588999998762 0111 13344 688999999985 1223689999999
Q ss_pred hhcCCCcEEEEeeCCCch-hhhhhhhhhhhhccccccccCc-hhHHHHHHHHcCCeeeE
Q 047406 211 KLLRPGGIFVLEPQPWVS-YEKNRRVSETTATNFQNIKLYP-KEFQEILLDKIGFRTVE 267 (290)
Q Consensus 211 ~~LkpgG~l~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ll~~~Gf~~v~ 267 (290)
+.|+|||+|++++..-.. ......+.+.....-..+.+++ +++.+ ++. ||++++
T Consensus 188 ~~L~PGG~Lvls~~~~d~~p~~~~~~~~~~~~~g~p~~~rs~~ei~~-~f~--Glelve 243 (277)
T 3giw_A 188 EPLPSGSYLAMSIGTAEFAPQEVGRVAREYAARNMPMRLRTHAEAEE-FFE--GLELVE 243 (277)
T ss_dssp TTSCTTCEEEEEEECCTTSHHHHHHHHHHHHHTTCCCCCCCHHHHHH-TTT--TSEECT
T ss_pred HhCCCCcEEEEEeccCCCCHHHHHHHHHHHHhcCCCCccCCHHHHHH-HhC--CCcccC
Confidence 999999999997542211 1111122222222111233444 55554 664 998654
No 212
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.19 E-value=1.7e-11 Score=111.93 Aligned_cols=118 Identities=17% Similarity=0.179 Sum_probs=81.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
..+.+|||||||+|..+..+++. +..+|+++|+|+.+++.|++++ ... .++ .+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~---------------------~~l----~~ 126 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KID---------------------NGL----LE 126 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTT---------------------TTH----HH
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhc---------------------ccc----cc
Confidence 46789999999999999999887 7679999999999999999865 210 000 00
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchH--HHHHHHHHHhhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDG--LITLFMRIWKLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~--~~~~l~~~~~~LkpgG~ 218 (290)
+. ..+...++.+...|..+.++. .++||+|++....++. .... ...++..+.++|+|||+
T Consensus 127 ~~-------------~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~----~~~~l~~~~~l~~~~~~L~pgG~ 188 (281)
T 1mjf_A 127 AM-------------LNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTDPVG----PAKVLFSEEFYRYVYDALNNPGI 188 (281)
T ss_dssp HH-------------HTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCCCC---------TTSHHHHHHHHHHEEEEEE
T ss_pred cc-------------ccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCCCCC----cchhhhHHHHHHHHHHhcCCCcE
Confidence 00 000123588888887553222 4689999986543211 1122 26789999999999999
Q ss_pred EEEee
Q 047406 219 FVLEP 223 (290)
Q Consensus 219 l~i~~ 223 (290)
+++..
T Consensus 189 lv~~~ 193 (281)
T 1mjf_A 189 YVTQA 193 (281)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99964
No 213
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.18 E-value=6.3e-11 Score=113.27 Aligned_cols=108 Identities=23% Similarity=0.275 Sum_probs=82.7
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
...+|++|||||||+|.+++..|+ .++.+|+|+|.|+ +++.|++.++.
T Consensus 80 ~~~~~k~VLDvG~GtGiLs~~Aa~-aGA~~V~ave~s~-~~~~a~~~~~~------------------------------ 127 (376)
T 4hc4_A 80 AALRGKTVLDVGAGTGILSIFCAQ-AGARRVYAVEASA-IWQQAREVVRF------------------------------ 127 (376)
T ss_dssp HHHTTCEEEEETCTTSHHHHHHHH-TTCSEEEEEECST-THHHHHHHHHH------------------------------
T ss_pred HhcCCCEEEEeCCCccHHHHHHHH-hCCCEEEEEeChH-HHHHHHHHHHH------------------------------
Confidence 346899999999999999887665 4566999999986 78888887765
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
+++.+.|.+...+..+ +..+ .++|+|+|-..-..+ .....+..++....++|+|||+
T Consensus 128 ------------------n~~~~~i~~i~~~~~~-~~lp-e~~DvivsE~~~~~l---~~e~~l~~~l~a~~r~Lkp~G~ 184 (376)
T 4hc4_A 128 ------------------NGLEDRVHVLPGPVET-VELP-EQVDAIVSEWMGYGL---LHESMLSSVLHARTKWLKEGGL 184 (376)
T ss_dssp ------------------TTCTTTEEEEESCTTT-CCCS-SCEEEEECCCCBTTB---TTTCSHHHHHHHHHHHEEEEEE
T ss_pred ------------------cCCCceEEEEeeeeee-ecCC-ccccEEEeecccccc---cccchhhhHHHHHHhhCCCCce
Confidence 6677789999999876 3444 689999983222111 1234567888888999999999
Q ss_pred EEE
Q 047406 219 FVL 221 (290)
Q Consensus 219 l~i 221 (290)
++-
T Consensus 185 ~iP 187 (376)
T 4hc4_A 185 LLP 187 (376)
T ss_dssp EES
T ss_pred ECC
Confidence 876
No 214
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.18 E-value=1.3e-10 Score=110.78 Aligned_cols=115 Identities=12% Similarity=0.071 Sum_probs=84.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.+++.+|.. +..+|+++|+|+.+++.|+.++..
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~-ga~~V~~vD~s~~al~~A~~N~~~-------------------------------- 257 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMG-GAMATTSVDLAKRSRALSLAHFEA-------------------------------- 257 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHT-TBSEEEEEESCTTHHHHHHHHHHH--------------------------------
T ss_pred cCCCeEEEEeeccCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 67899999999999999998875 345899999999999999999876
Q ss_pred HHHHHHhhhcCCCccccCcCc-ceeEeecccccCCCC---CCCceeEEEEchhhhh---hhhcCCchHHHHHHHHHHhhc
Q 047406 141 AQEEKKAISRNCSPAERNLFD-IVSFKQENFVHGRDS---PEKYYDAILCLSVTKW---IHLNWGDDGLITLFMRIWKLL 213 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~~---~~l~~~~~~~~~~l~~~~~~L 213 (290)
+++.. ++.|.+.|+.+.++. ...+||+|++.....- -...-.......++..+.++|
T Consensus 258 ----------------n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L 321 (385)
T 2b78_A 258 ----------------NHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEIL 321 (385)
T ss_dssp ----------------TTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTE
T ss_pred ----------------cCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhc
Confidence 44443 688999997653221 2358999998432200 000001134567888999999
Q ss_pred CCCcEEEEeeC
Q 047406 214 RPGGIFVLEPQ 224 (290)
Q Consensus 214 kpgG~l~i~~~ 224 (290)
+|||+++++..
T Consensus 322 ~pgG~l~~~~~ 332 (385)
T 2b78_A 322 SENGLIIASTN 332 (385)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCcEEEEEeC
Confidence 99999999754
No 215
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=7.2e-11 Score=96.75 Aligned_cols=102 Identities=17% Similarity=0.163 Sum_probs=75.7
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..++.+|||+|||+|.++..+++.+ +..+++++|+|+ +++.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~------------------------------------- 61 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI------------------------------------- 61 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-------------------------------------
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-------------------------------------
Confidence 4578899999999999999999885 447999999988 5321
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCC--------CCCCceeEEEEchhhhhhhhcCCchH------HHH
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD--------SPEKYYDAILCLSVTKWIHLNWGDDG------LIT 204 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~--------~~~~~fD~I~~~~vl~~~~l~~~~~~------~~~ 204 (290)
.++.+...|+.+. + .+.++||+|++...++|.... ..+. ...
T Consensus 62 ----------------------~~~~~~~~d~~~~-~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 117 (180)
T 1ej0_A 62 ----------------------VGVDFLQGDFRDE-LVMKALLERVGDSKVQVVMSDMAPNMSGTP-AVDIPRAMYLVEL 117 (180)
T ss_dssp ----------------------TTEEEEESCTTSH-HHHHHHHHHHTTCCEEEEEECCCCCCCSCH-HHHHHHHHHHHHH
T ss_pred ----------------------CcEEEEEcccccc-hhhhhhhccCCCCceeEEEECCCccccCCC-ccchHHHHHHHHH
Confidence 1467778887652 2 345789999998776543210 0011 168
Q ss_pred HHHHHHhhcCCCcEEEEee
Q 047406 205 LFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 205 ~l~~~~~~LkpgG~l~i~~ 223 (290)
++.++.++|+|||.+++..
T Consensus 118 ~l~~~~~~L~~gG~l~~~~ 136 (180)
T 1ej0_A 118 ALEMCRDVLAPGGSFVVKV 136 (180)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHcCCCcEEEEEE
Confidence 8999999999999999964
No 216
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.15 E-value=9.9e-12 Score=104.29 Aligned_cols=116 Identities=16% Similarity=0.064 Sum_probs=82.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.+|.+|||+|||. +++|+|+.+++.|++....
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~------------------------------- 42 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGN------------------------------- 42 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTT-------------------------------
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhccc-------------------------------
Confidence 46889999999986 2389999999999874211
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCC---CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS---PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
.+.+.+.|+.+ ++. ++++||+|+|..+++|+. .+...++.++.++|+||
T Consensus 43 ----------------------~~~~~~~d~~~-~~~~~~~~~~fD~V~~~~~l~~~~-----~~~~~~l~~~~r~Lkpg 94 (176)
T 2ld4_A 43 ----------------------EGRVSVENIKQ-LLQSAHKESSFDIILSGLVPGSTT-----LHSAEILAEIARILRPG 94 (176)
T ss_dssp ----------------------TSEEEEEEGGG-GGGGCCCSSCEEEEEECCSTTCCC-----CCCHHHHHHHHHHEEEE
T ss_pred ----------------------CcEEEEechhc-CccccCCCCCEeEEEECChhhhcc-----cCHHHHHHHHHHHCCCC
Confidence 26778888765 343 568899999999997661 24588999999999999
Q ss_pred cEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCC
Q 047406 217 GIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGF 263 (290)
Q Consensus 217 G~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 263 (290)
|++++..+..... .. .......+++.. +++++||
T Consensus 95 G~l~~~~~~~~~~----------~~--~~~~~~~~~~~~-~l~~aGf 128 (176)
T 2ld4_A 95 GCLFLKEPVETAV----------DN--NSKVKTASKLCS-ALTLSGL 128 (176)
T ss_dssp EEEEEEEEEESSS----------CS--SSSSCCHHHHHH-HHHHTTC
T ss_pred EEEEEEccccccc----------cc--ccccCCHHHHHH-HHHHCCC
Confidence 9999964311100 00 011123455555 7899999
No 217
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.15 E-value=3.2e-10 Score=104.25 Aligned_cols=106 Identities=15% Similarity=0.081 Sum_probs=84.4
Q ss_pred hhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 56 LKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 56 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
+.....+|.+|||+|||+|.+++.+|.. +..+|+++|+||.+++.++.|+..
T Consensus 119 i~~~~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~--------------------------- 170 (278)
T 3k6r_A 119 MAKVAKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHL--------------------------- 170 (278)
T ss_dssp HHHHCCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHH---------------------------
T ss_pred HHHhcCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHH---------------------------
Confidence 3445678999999999999999998876 456899999999999999999887
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
+++.+.+.+..+|..+. .+.+.||.|++.... ....++..+.++|+|
T Consensus 171 ---------------------N~v~~~v~~~~~D~~~~--~~~~~~D~Vi~~~p~----------~~~~~l~~a~~~lk~ 217 (278)
T 3k6r_A 171 ---------------------NKVEDRMSAYNMDNRDF--PGENIADRILMGYVV----------RTHEFIPKALSIAKD 217 (278)
T ss_dssp ---------------------TTCTTTEEEECSCTTTC--CCCSCEEEEEECCCS----------SGGGGHHHHHHHEEE
T ss_pred ---------------------cCCCCcEEEEeCcHHHh--ccccCCCEEEECCCC----------cHHHHHHHHHHHcCC
Confidence 56667799999998763 235789999875321 123456778899999
Q ss_pred CcEEEEe
Q 047406 216 GGIFVLE 222 (290)
Q Consensus 216 gG~l~i~ 222 (290)
||++.+.
T Consensus 218 gG~ih~~ 224 (278)
T 3k6r_A 218 GAIIHYH 224 (278)
T ss_dssp EEEEEEE
T ss_pred CCEEEEE
Confidence 9998763
No 218
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.14 E-value=4.1e-11 Score=111.24 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=85.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
..+.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++....
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~------------------------------ 125 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWH------------------------------ 125 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHH------------------------------
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhc------------------------------
Confidence 46789999999999999999887666799999999999999998764310
Q ss_pred HHHHHHhhhcCCCccccC-c-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchH--HHHHHHHHHhhcCCC
Q 047406 141 AQEEKKAISRNCSPAERN-L-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDG--LITLFMRIWKLLRPG 216 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~-~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~--~~~~l~~~~~~Lkpg 216 (290)
.+ + ..++.+...|..+.++...++||+|++....++. ....... ...++..+.++|+||
T Consensus 126 ----------------~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~-~~~~~~~l~~~~~l~~~~~~Lkpg 188 (314)
T 1uir_A 126 ----------------QGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVG-EDNPARLLYTVEFYRLVKAHLNPG 188 (314)
T ss_dssp ----------------TTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBS-TTCGGGGGSSHHHHHHHHHTEEEE
T ss_pred ----------------cccccCCceEEEEchHHHHHHhcCCCccEEEECCCCccc-ccCcchhccHHHHHHHHHHhcCCC
Confidence 01 1 2358888888766333345789999997554320 0000112 368899999999999
Q ss_pred cEEEEee
Q 047406 217 GIFVLEP 223 (290)
Q Consensus 217 G~l~i~~ 223 (290)
|++++..
T Consensus 189 G~lv~~~ 195 (314)
T 1uir_A 189 GVMGMQT 195 (314)
T ss_dssp EEEEEEE
T ss_pred cEEEEEc
Confidence 9999964
No 219
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.14 E-value=1.6e-10 Score=113.26 Aligned_cols=115 Identities=19% Similarity=0.290 Sum_probs=84.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCC-ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNC-RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~-~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|..+..+|+.++. ..|+++|+|+.+++.++.++..
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r------------------------------- 148 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVER------------------------------- 148 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH-------------------------------
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 57899999999999999999988764 5899999999999999999876
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEc------hhhhh---hhhcCCch-------HHH
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCL------SVTKW---IHLNWGDD-------GLI 203 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~------~vl~~---~~l~~~~~-------~~~ 203 (290)
.++. +.+...|..+......+.||+|++. .++.. ....|..+ .+.
T Consensus 149 -----------------~G~~--v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~ 209 (464)
T 3m6w_A 149 -----------------WGAP--LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQK 209 (464)
T ss_dssp -----------------HCCC--CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHH
T ss_pred -----------------cCCe--EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHH
Confidence 2333 6777777655211134689999962 11110 00011222 237
Q ss_pred HHHHHHHhhcCCCcEEEEeeCC
Q 047406 204 TLFMRIWKLLRPGGIFVLEPQP 225 (290)
Q Consensus 204 ~~l~~~~~~LkpgG~l~i~~~~ 225 (290)
.++..+.++|+|||+|++++-.
T Consensus 210 ~iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 210 ALLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp HHHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHHhcCCCcEEEEEecc
Confidence 8999999999999999997643
No 220
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.14 E-value=5e-10 Score=95.88 Aligned_cols=100 Identities=10% Similarity=0.166 Sum_probs=75.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+.++..
T Consensus 48 ~~~~~vlD~g~G~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 94 (207)
T 1wy7_A 48 IEGKVVADLGAGTGVLSYGALLL-GAKEVICVEVDKEAVDVLIENLGE-------------------------------- 94 (207)
T ss_dssp STTCEEEEETCTTCHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHTGG--------------------------------
T ss_pred CCcCEEEEeeCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 46789999999999999998886 344899999999999999987543
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.++ ++.+.+.|+.+ . +..||+|++....++.. ......+++.+.+++ |++++
T Consensus 95 ----------------~~~--~~~~~~~d~~~-~---~~~~D~v~~~~p~~~~~----~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 95 ----------------FKG--KFKVFIGDVSE-F---NSRVDIVIMNPPFGSQR----KHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp ----------------GTT--SEEEEESCGGG-C---CCCCSEEEECCCCSSSS----TTTTHHHHHHHHHHC--SEEEE
T ss_pred ----------------cCC--CEEEEECchHH-c---CCCCCEEEEcCCCcccc----CCchHHHHHHHHHhc--CcEEE
Confidence 223 58899999876 2 24899999987654321 123357788888888 55444
Q ss_pred E
Q 047406 221 L 221 (290)
Q Consensus 221 i 221 (290)
+
T Consensus 147 ~ 147 (207)
T 1wy7_A 147 I 147 (207)
T ss_dssp E
T ss_pred E
Confidence 4
No 221
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.14 E-value=1.9e-10 Score=112.53 Aligned_cols=115 Identities=12% Similarity=0.130 Sum_probs=83.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCC-ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNC-RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~-~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
.++.+|||+|||+|..+..+|+.+++ ..|+++|+|+.+++.++.++...
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~------------------------------ 153 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW------------------------------ 153 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH------------------------------
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc------------------------------
Confidence 57899999999999999999988764 58999999999999999998762
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchh------hhh---hhhcCCc-------hHHH
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSV------TKW---IHLNWGD-------DGLI 203 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~v------l~~---~~l~~~~-------~~~~ 203 (290)
++. ++.+...|..+......+.||+|++..- +.. ....|.. ..+.
T Consensus 154 ------------------g~~-nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~ 214 (456)
T 3m4x_A 154 ------------------GVS-NAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQ 214 (456)
T ss_dssp ------------------TCS-SEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHH
T ss_pred ------------------CCC-ceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHH
Confidence 232 4778888875521112478999998321 100 0000111 2235
Q ss_pred HHHHHHHhhcCCCcEEEEeeC
Q 047406 204 TLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 204 ~~l~~~~~~LkpgG~l~i~~~ 224 (290)
.++..+.++|+|||+|++++-
T Consensus 215 ~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 215 EILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp HHHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHhcCCCcEEEEEEe
Confidence 889999999999999999654
No 222
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.13 E-value=2.8e-11 Score=107.72 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=76.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhH----cCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQK----FNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~----~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
.++.+|||||||+|..+..+++. .+..+|+|+|+|+.+++.|+.
T Consensus 80 ~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-------------------------------- 127 (236)
T 2bm8_A 80 LRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-------------------------------- 127 (236)
T ss_dssp HCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG--------------------------------
T ss_pred cCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc--------------------------------
Confidence 35689999999999999999987 456799999999988766641
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCcceeEeecccccC--CCCCC-CceeEEEEchhhhhhhhcCCchHHHHHHHHHHh-h
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHG--RDSPE-KYYDAILCLSVTKWIHLNWGDDGLITLFMRIWK-L 212 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~--~~~~~-~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~-~ 212 (290)
+..++.+.++|..+. ++... .+||+|++... | .....++.++.+ +
T Consensus 128 ----------------------~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~----~-----~~~~~~l~~~~r~~ 176 (236)
T 2bm8_A 128 ----------------------DMENITLHQGDCSDLTTFEHLREMAHPLIFIDNA----H-----ANTFNIMKWAVDHL 176 (236)
T ss_dssp ----------------------GCTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS----C-----SSHHHHHHHHHHHT
T ss_pred ----------------------cCCceEEEECcchhHHHHHhhccCCCCEEEECCc----h-----HhHHHHHHHHHHhh
Confidence 123588889988663 23222 37999997544 1 245678999997 9
Q ss_pred cCCCcEEEEee
Q 047406 213 LRPGGIFVLEP 223 (290)
Q Consensus 213 LkpgG~l~i~~ 223 (290)
|+|||++++..
T Consensus 177 LkpGG~lv~~d 187 (236)
T 2bm8_A 177 LEEGDYFIIED 187 (236)
T ss_dssp CCTTCEEEECS
T ss_pred CCCCCEEEEEe
Confidence 99999999964
No 223
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.12 E-value=9.3e-10 Score=106.90 Aligned_cols=116 Identities=17% Similarity=0.199 Sum_probs=84.7
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCC-ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNC-RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~-~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..++.+|||+|||+|..+..+++.++. .+|+++|+|+.+++.++.++..
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~------------------------------ 306 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR------------------------------ 306 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH------------------------------
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH------------------------------
Confidence 357889999999999999999998765 6899999999999999998775
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCC-CCCCceeEEEEc------hhhhhh---hhcCCchH-------
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD-SPEKYYDAILCL------SVTKWI---HLNWGDDG------- 201 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~fD~I~~~------~vl~~~---~l~~~~~~------- 201 (290)
.++ .++.+...|+.+..+ .+.+.||+|++. .+++.. ...+..++
T Consensus 307 ------------------~g~-~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~ 367 (450)
T 2yxl_A 307 ------------------MGI-KIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQL 367 (450)
T ss_dssp ------------------TTC-CSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHH
T ss_pred ------------------cCC-CcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHH
Confidence 223 247888888866321 233679999962 222100 00011122
Q ss_pred HHHHHHHHHhhcCCCcEEEEeeC
Q 047406 202 LITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 202 ~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
+..++.++.++|+|||++++++.
T Consensus 368 q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 368 QRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp HHHHHHHHHTTEEEEEEEEEEES
T ss_pred HHHHHHHHHHhcCCCcEEEEEeC
Confidence 26889999999999999998654
No 224
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.12 E-value=5.8e-10 Score=101.96 Aligned_cols=142 Identities=13% Similarity=0.065 Sum_probs=99.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.+..+|||||||+|.++..++...+...++++|+|+.+++.++.++..
T Consensus 130 i~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~------------------------------- 178 (281)
T 3lcv_B 130 LPRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTR------------------------------- 178 (281)
T ss_dssp SCCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHH-------------------------------
T ss_pred cCCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHh-------------------------------
Confidence 3557899999999999999998887888999999999999999999876
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
.++ ...+...|+... .+.++||+++++-+++++. ++.....+ ++...|+|+|++
T Consensus 179 -----------------~g~--~~~~~v~D~~~~--~p~~~~DvaL~lkti~~Le----~q~kg~g~-~ll~aL~~~~vv 232 (281)
T 3lcv_B 179 -----------------LNV--PHRTNVADLLED--RLDEPADVTLLLKTLPCLE----TQQRGSGW-EVIDIVNSPNIV 232 (281)
T ss_dssp -----------------TTC--CEEEEECCTTTS--CCCSCCSEEEETTCHHHHH----HHSTTHHH-HHHHHSSCSEEE
T ss_pred -----------------cCC--CceEEEeeeccc--CCCCCcchHHHHHHHHHhh----hhhhHHHH-HHHHHhCCCCEE
Confidence 233 267788888763 3668899999999987652 12223455 899999999988
Q ss_pred EEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEecc
Q 047406 220 VLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIG 270 (290)
Q Consensus 220 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~ 270 (290)
+--+. .+..... -.....+...|.+ .+...|..+.+...
T Consensus 233 VSfp~--ksl~Grs---------~gm~~~Y~~~~e~-~~~~~g~~~~~~~~ 271 (281)
T 3lcv_B 233 VTFPT--KSLGQRS---------KGMFQNYSQSFES-QARERSCRIQRLEI 271 (281)
T ss_dssp EEEEC--C----------------CHHHHHHHHHHH-HHHHHTCCEEEEEE
T ss_pred Eeccc--hhhcCCC---------cchhhHHHHHHHH-HHHhcCCceeeeee
Confidence 87443 1111110 0111234455555 66778886555433
No 225
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.12 E-value=7.9e-11 Score=110.21 Aligned_cols=108 Identities=12% Similarity=0.101 Sum_probs=82.3
Q ss_pred CcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQE 143 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (290)
.+|||||||+|.++..+++.++..+|+++|+|+.+++.|++++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~----------------------------------- 135 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDI----------------------------------- 135 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCC-----------------------------------
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccc-----------------------------------
Confidence 399999999999999999988888999999999999999986421
Q ss_pred HHHhhhcCCCccccCcCcceeEeecccccCCC-CCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCcEEE
Q 047406 144 EKKAISRNCSPAERNLFDIVSFKQENFVHGRD-SPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG~l~ 220 (290)
....++.+...|..+.+. .+.++||+|++....++. ....+ ..++..+.++|+|||+++
T Consensus 136 --------------~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~----~~~~L~t~efl~~~~r~LkpgGvlv 197 (317)
T 3gjy_A 136 --------------PRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAI----TPQNFTTVEFFEHCHRGLAPGGLYV 197 (317)
T ss_dssp --------------CCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSC----CCGGGSBHHHHHHHHHHEEEEEEEE
T ss_pred --------------cCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccc----cchhhhHHHHHHHHHHhcCCCcEEE
Confidence 012368899999766322 245789999985433211 11222 688999999999999999
Q ss_pred EeeC
Q 047406 221 LEPQ 224 (290)
Q Consensus 221 i~~~ 224 (290)
+...
T Consensus 198 ~~~~ 201 (317)
T 3gjy_A 198 ANCG 201 (317)
T ss_dssp EEEE
T ss_pred EEec
Confidence 9653
No 226
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.11 E-value=3.2e-10 Score=108.03 Aligned_cols=113 Identities=18% Similarity=0.205 Sum_probs=84.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+.++..
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~--------------------------------- 262 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKL--------------------------------- 262 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHH---------------------------------
Confidence 8899999999999999999885 456899999999999999998876
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCC---CCCceeEEEEchhhh---hhhhcCCchHHHHHHHHHHhhcCC
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS---PEKYYDAILCLSVTK---WIHLNWGDDGLITLFMRIWKLLRP 215 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~---~~~l~~~~~~~~~~l~~~~~~Lkp 215 (290)
+++..++.+...|+.+..+. ...+||+|++..... .-++.-...+...++.++.++|+|
T Consensus 263 ---------------n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lkp 327 (396)
T 2as0_A 263 ---------------NGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKD 327 (396)
T ss_dssp ---------------TTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEE
T ss_pred ---------------cCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34444688999987653211 246899999843210 000000014567899999999999
Q ss_pred CcEEEEee
Q 047406 216 GGIFVLEP 223 (290)
Q Consensus 216 gG~l~i~~ 223 (290)
||++++..
T Consensus 328 gG~lv~~~ 335 (396)
T 2as0_A 328 GGILVTCS 335 (396)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEE
Confidence 99988864
No 227
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.11 E-value=5.1e-10 Score=95.65 Aligned_cols=96 Identities=15% Similarity=0.145 Sum_probs=71.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..++.. +..+|+|+|+|+.+++.|+.++.
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~--------------------------------- 95 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCG--------------------------------- 95 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCT---------------------------------
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcC---------------------------------
Confidence 47789999999999999998876 55579999999999999987521
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
++.+.+.|+.+ ++ +.||+|++...++|.. ......++.++.+++ |+ ++
T Consensus 96 ---------------------~~~~~~~d~~~-~~---~~~D~v~~~~p~~~~~----~~~~~~~l~~~~~~~--g~-~~ 143 (200)
T 1ne2_A 96 ---------------------GVNFMVADVSE-IS---GKYDTWIMNPPFGSVV----KHSDRAFIDKAFETS--MW-IY 143 (200)
T ss_dssp ---------------------TSEEEECCGGG-CC---CCEEEEEECCCC-----------CHHHHHHHHHHE--EE-EE
T ss_pred ---------------------CCEEEECcHHH-CC---CCeeEEEECCCchhcc----CchhHHHHHHHHHhc--Cc-EE
Confidence 47888888876 22 6899999998886653 122357888899888 44 44
Q ss_pred Ee
Q 047406 221 LE 222 (290)
Q Consensus 221 i~ 222 (290)
+.
T Consensus 144 ~~ 145 (200)
T 1ne2_A 144 SI 145 (200)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 228
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.10 E-value=1.1e-10 Score=116.55 Aligned_cols=108 Identities=21% Similarity=0.225 Sum_probs=78.2
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
.+.++.+|||||||.|.++..||+. +.+|+|+|+|+.+++.|+.+...
T Consensus 63 ~~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~------------------------------ 110 (569)
T 4azs_A 63 ALGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEE------------------------------ 110 (569)
T ss_dssp HHTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHT------------------------------
T ss_pred hcCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHh------------------------------
Confidence 3457789999999999999999987 45899999999999999987654
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCC-CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR-DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~-~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
.+.. ++.+.+.+..+.. ...++.||+|+|..+++|+.- +.....+..+.+.|+++|
T Consensus 111 ------------------~~~~-~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~----~~~~~~~~~~~~tl~~~~ 167 (569)
T 4azs_A 111 ------------------NPDF-AAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVH----LHGIDEVKRLLSRLADVT 167 (569)
T ss_dssp ------------------STTS-EEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHH----HHCHHHHHHHHHHHHHHS
T ss_pred ------------------cCCC-ceEEEECCHHHHhhhccCCCccEEEECcchhcCCC----HHHHHHHHHHHHHhcccc
Confidence 2211 4888888876521 234578999999999987741 111222334556666666
Q ss_pred EEEE
Q 047406 218 IFVL 221 (290)
Q Consensus 218 ~l~i 221 (290)
..++
T Consensus 168 ~~~~ 171 (569)
T 4azs_A 168 QAVI 171 (569)
T ss_dssp SEEE
T ss_pred ceee
Confidence 5554
No 229
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.08 E-value=1.7e-09 Score=93.18 Aligned_cols=101 Identities=18% Similarity=0.166 Sum_probs=70.6
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|.++..+++. ..+|+|+|+++..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~~----------------------------------------- 59 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEME----------------------------------------- 59 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCCC-----------------------------------------
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEeccccc-----------------------------------------
Confidence 467899999999999999999887 5699999998621
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCC--------C---CCceeEEEEchhhh----h-hhhcCCchHHH
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS--------P---EKYYDAILCLSVTK----W-IHLNWGDDGLI 203 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~--------~---~~~fD~I~~~~vl~----~-~~l~~~~~~~~ 203 (290)
...++.+.+.|+.+. +. . .++||+|+|..... | .......+...
T Consensus 60 -------------------~~~~v~~~~~D~~~~-~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~ 119 (191)
T 3dou_A 60 -------------------EIAGVRFIRCDIFKE-TIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQ 119 (191)
T ss_dssp -------------------CCTTCEEEECCTTSS-SHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHH
T ss_pred -------------------cCCCeEEEEccccCH-HHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHH
Confidence 012578888998662 11 0 14899999953211 0 00000012346
Q ss_pred HHHHHHHhhcCCCcEEEEee
Q 047406 204 TLFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 204 ~~l~~~~~~LkpgG~l~i~~ 223 (290)
.++..+.++|+|||.|++..
T Consensus 120 ~~l~~a~~~LkpGG~lv~k~ 139 (191)
T 3dou_A 120 RVMEIAVRYLRNGGNVLLKQ 139 (191)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHccCCCEEEEEE
Confidence 78899999999999999853
No 230
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.07 E-value=2.8e-10 Score=96.31 Aligned_cols=103 Identities=24% Similarity=0.276 Sum_probs=70.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCC---------ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhc
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNC---------RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEK 130 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~---------~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (290)
+.++.+|||+|||+|.++..+++.++. .+|+|+|+|+.. .
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~---------~---------------------- 68 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF---------P---------------------- 68 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC---------C----------------------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc---------c----------------------
Confidence 467899999999999999999998764 689999999721 0
Q ss_pred cCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEe-ecccccCC-------CCCCCceeEEEEchhhhhhhhcCCchH-
Q 047406 131 GDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFK-QENFVHGR-------DSPEKYYDAILCLSVTKWIHLNWGDDG- 201 (290)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~d~~~~~-------~~~~~~fD~I~~~~vl~~~~l~~~~~~- 201 (290)
...+.+. +.|+.+.. ..+..+||+|+|....++.. .+..+.
T Consensus 69 -----------------------------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~-~~~~~~~ 118 (196)
T 2nyu_A 69 -----------------------------LEGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATG-FRDLDHD 118 (196)
T ss_dssp -----------------------------CTTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCS-CHHHHHH
T ss_pred -----------------------------CCCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCC-CcccCHH
Confidence 0135555 66654310 01235799999965332110 000011
Q ss_pred -----HHHHHHHHHhhcCCCcEEEEee
Q 047406 202 -----LITLFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 202 -----~~~~l~~~~~~LkpgG~l~i~~ 223 (290)
...++.++.++|+|||.+++..
T Consensus 119 ~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 119 RLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 2588999999999999999964
No 231
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.07 E-value=2.5e-10 Score=108.41 Aligned_cols=110 Identities=18% Similarity=0.219 Sum_probs=83.7
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|.+++.++.. ..+|+++|+|+.+++.|+.++..
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~--------------------------------- 253 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARL--------------------------------- 253 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHH---------------------------------
Confidence 7889999999999999999987 56899999999999999998876
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCC---CCCceeEEEEchhhhhhhhc-----CCchHHHHHHHHHHhhc
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS---PEKYYDAILCLSVTKWIHLN-----WGDDGLITLFMRIWKLL 213 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~~~~l~-----~~~~~~~~~l~~~~~~L 213 (290)
+++.. +.+...|+.+..+. ...+||+|++..-. +... -.......++..+.++|
T Consensus 254 ---------------n~~~~-~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~--~~~~~~~~~~~~~~~~~~l~~~~~~L 315 (382)
T 1wxx_A 254 ---------------NGLGN-VRVLEANAFDLLRRLEKEGERFDLVVLDPPA--FAKGKKDVERAYRAYKEVNLRAIKLL 315 (382)
T ss_dssp ---------------TTCTT-EEEEESCHHHHHHHHHHTTCCEEEEEECCCC--SCCSTTSHHHHHHHHHHHHHHHHHTE
T ss_pred ---------------cCCCC-ceEEECCHHHHHHHHHhcCCCeeEEEECCCC--CCCChhHHHHHHHHHHHHHHHHHHhc
Confidence 33433 88999987663221 14689999984321 0000 00145678999999999
Q ss_pred CCCcEEEEeeC
Q 047406 214 RPGGIFVLEPQ 224 (290)
Q Consensus 214 kpgG~l~i~~~ 224 (290)
+|||++++...
T Consensus 316 kpgG~l~~~~~ 326 (382)
T 1wxx_A 316 KEGGILATASC 326 (382)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCCEEEEEEC
Confidence 99999999754
No 232
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.06 E-value=3.8e-10 Score=107.61 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=86.8
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|.+++.+|.. +..+|+|+|+|+.+++.|+.++..
T Consensus 218 ~~~~~~VLDl~cG~G~~sl~la~~-g~~~V~~vD~s~~al~~a~~n~~~------------------------------- 265 (396)
T 3c0k_A 218 YVENKRVLNCFSYTGGFAVSALMG-GCSQVVSVDTSQEALDIARQNVEL------------------------------- 265 (396)
T ss_dssp HCTTCEEEEESCTTCSHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred hhCCCeEEEeeccCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 368899999999999999998885 345899999999999999999876
Q ss_pred hHHHHHHhhhcCCCccccCc-CcceeEeecccccCCCC---CCCceeEEEEchhhhhh---hhcCCchHHHHHHHHHHhh
Q 047406 140 AAQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDS---PEKYYDAILCLSVTKWI---HLNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl~~~---~l~~~~~~~~~~l~~~~~~ 212 (290)
+++ ..++.+...|+.+..+. ....||+|++..-.... ++.-...+...++.++.++
T Consensus 266 -----------------ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~ 328 (396)
T 3c0k_A 266 -----------------NKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQL 328 (396)
T ss_dssp -----------------TTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHT
T ss_pred -----------------cCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 344 33688999997663211 13689999985321000 0001125678899999999
Q ss_pred cCCCcEEEEeeC
Q 047406 213 LRPGGIFVLEPQ 224 (290)
Q Consensus 213 LkpgG~l~i~~~ 224 (290)
|+|||+++++..
T Consensus 329 LkpgG~l~~~~~ 340 (396)
T 3c0k_A 329 LNEGGILLTFSC 340 (396)
T ss_dssp EEEEEEEEEEEC
T ss_pred cCCCcEEEEEeC
Confidence 999999999754
No 233
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.06 E-value=3.3e-09 Score=102.55 Aligned_cols=103 Identities=21% Similarity=0.264 Sum_probs=77.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+|.. ..+|+|+|+|+.+++.|+.++..
T Consensus 285 ~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~-------------------------------- 330 (433)
T 1uwv_A 285 QPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARL-------------------------------- 330 (433)
T ss_dssp CTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHH--------------------------------
Confidence 46789999999999999999987 56999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC---CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD---SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
+++. ++.|...|+.+.++ .+.+.||+|++..-. .+...++..+. .++|++
T Consensus 331 ----------------~~~~-~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr---------~g~~~~~~~l~-~~~p~~ 383 (433)
T 1uwv_A 331 ----------------NGLQ-NVTFYHENLEEDVTKQPWAKNGFDKVLLDPAR---------AGAAGVMQQII-KLEPIR 383 (433)
T ss_dssp ----------------TTCC-SEEEEECCTTSCCSSSGGGTTCCSEEEECCCT---------TCCHHHHHHHH-HHCCSE
T ss_pred ----------------cCCC-ceEEEECCHHHHhhhhhhhcCCCCEEEECCCC---------ccHHHHHHHHH-hcCCCe
Confidence 3333 68999999876422 234689999985432 11223444443 378999
Q ss_pred EEEEeeC
Q 047406 218 IFVLEPQ 224 (290)
Q Consensus 218 ~l~i~~~ 224 (290)
++++++.
T Consensus 384 ivyvsc~ 390 (433)
T 1uwv_A 384 IVYVSCN 390 (433)
T ss_dssp EEEEESC
T ss_pred EEEEECC
Confidence 9999754
No 234
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.05 E-value=5.6e-10 Score=107.11 Aligned_cols=115 Identities=18% Similarity=0.135 Sum_probs=79.6
Q ss_pred hhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 56 LKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 56 l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
+.....+|.+|||+|||+|.+++.+|.. +. +|+++|+|+.+++.|+.++..
T Consensus 208 l~~~~~~g~~VLDlg~GtG~~sl~~a~~-ga-~V~avDis~~al~~a~~n~~~--------------------------- 258 (393)
T 4dmg_A 208 FEAMVRPGERVLDVYSYVGGFALRAARK-GA-YALAVDKDLEALGVLDQAALR--------------------------- 258 (393)
T ss_dssp HHTTCCTTCEEEEESCTTTHHHHHHHHT-TC-EEEEEESCHHHHHHHHHHHHH---------------------------
T ss_pred HHHHhcCCCeEEEcccchhHHHHHHHHc-CC-eEEEEECCHHHHHHHHHHHHH---------------------------
Confidence 3334445999999999999999998885 33 599999999999999999876
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhh---hhhhcCCchHHHHHHHHHHhh
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTK---WIHLNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~---~~~l~~~~~~~~~~l~~~~~~ 212 (290)
+++. ..+.+.|..+.++...+.||+|++....- .-.+.-...+...++..+.++
T Consensus 259 ---------------------ng~~--~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~ 315 (393)
T 4dmg_A 259 ---------------------LGLR--VDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRL 315 (393)
T ss_dssp ---------------------HTCC--CEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------hCCC--CcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 2232 23457776653222234499999853320 000000013557899999999
Q ss_pred cCCCcEEEEe
Q 047406 213 LRPGGIFVLE 222 (290)
Q Consensus 213 LkpgG~l~i~ 222 (290)
|+|||+|++.
T Consensus 316 LkpGG~Lv~~ 325 (393)
T 4dmg_A 316 LAEEGFLWLS 325 (393)
T ss_dssp EEEEEEEEEE
T ss_pred cCCCCEEEEE
Confidence 9999999964
No 235
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.05 E-value=6e-10 Score=104.21 Aligned_cols=100 Identities=12% Similarity=0.094 Sum_probs=81.3
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchh
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKN 137 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (290)
..+.++.+|||+|||+|.+++. +. ++.+|+++|+|+.+++.|+.++..
T Consensus 191 ~~~~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~----------------------------- 238 (336)
T 2yx1_A 191 KKVSLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKL----------------------------- 238 (336)
T ss_dssp HHCCTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHH-----------------------------
T ss_pred HhcCCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHH-----------------------------
Confidence 4446889999999999999999 77 466999999999999999999876
Q ss_pred hhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 138 VTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
+++..++.+.+.|..+.. ..||+|++.... ....++..+.++|+|||
T Consensus 239 -------------------n~l~~~v~~~~~D~~~~~----~~fD~Vi~dpP~----------~~~~~l~~~~~~L~~gG 285 (336)
T 2yx1_A 239 -------------------NKLEHKIIPILSDVREVD----VKGNRVIMNLPK----------FAHKFIDKALDIVEEGG 285 (336)
T ss_dssp -------------------TTCTTTEEEEESCGGGCC----CCEEEEEECCTT----------TGGGGHHHHHHHEEEEE
T ss_pred -------------------cCCCCcEEEEECChHHhc----CCCcEEEECCcH----------hHHHHHHHHHHHcCCCC
Confidence 444456899999987742 789999985321 11267888999999999
Q ss_pred EEEEe
Q 047406 218 IFVLE 222 (290)
Q Consensus 218 ~l~i~ 222 (290)
++++.
T Consensus 286 ~l~~~ 290 (336)
T 2yx1_A 286 VIHYY 290 (336)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99885
No 236
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.02 E-value=1.8e-09 Score=100.79 Aligned_cols=111 Identities=11% Similarity=0.139 Sum_probs=82.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCC-----ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNC-----RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~-----~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
++.+|||+|||+|.++..++...+. .+++|+|+++.+++.|+.++...
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~--------------------------- 182 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ--------------------------- 182 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH---------------------------
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC---------------------------
Confidence 5689999999999999998887653 68999999999999999987651
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhh-----cC------Cc-hHHHH
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHL-----NW------GD-DGLIT 204 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l-----~~------~~-~~~~~ 204 (290)
++ .+.+.+.|.... .+..+||+|+++....+..- .+ +. +....
T Consensus 183 ---------------------g~--~~~i~~~D~l~~--~~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~ 237 (344)
T 2f8l_A 183 ---------------------RQ--KMTLLHQDGLAN--LLVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFL 237 (344)
T ss_dssp ---------------------TC--CCEEEESCTTSC--CCCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHH
T ss_pred ---------------------CC--CceEEECCCCCc--cccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHH
Confidence 22 367888887653 24578999999866432210 00 00 11236
Q ss_pred HHHHHHhhcCCCcEEEEeeC
Q 047406 205 LFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 205 ~l~~~~~~LkpgG~l~i~~~ 224 (290)
++.++.+.|+|||++++..+
T Consensus 238 ~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 238 FIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp HHHHHHHTEEEEEEEEEEEE
T ss_pred HHHHHHHHhCCCCEEEEEEC
Confidence 89999999999999999754
No 237
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.02 E-value=1.1e-09 Score=107.57 Aligned_cols=116 Identities=22% Similarity=0.265 Sum_probs=84.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
++.+|||+|||+|..+..+|+.++ ...|+++|+|+.+++.++.++...
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~------------------------------- 165 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC------------------------------- 165 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH-------------------------------
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-------------------------------
Confidence 789999999999999999999875 358999999999999999988762
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEc------hhhhhh-h--hcCCc-------hHHHH
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCL------SVTKWI-H--LNWGD-------DGLIT 204 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~------~vl~~~-~--l~~~~-------~~~~~ 204 (290)
++. ++.+...|..+......+.||+|+|. .++... . ..|.. ..+..
T Consensus 166 -----------------g~~-nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~ 227 (479)
T 2frx_A 166 -----------------GIS-NVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRE 227 (479)
T ss_dssp -----------------TCC-SEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHH
T ss_pred -----------------CCC-cEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHH
Confidence 222 47788888765211134689999982 111100 0 01111 22468
Q ss_pred HHHHHHhhcCCCcEEEEeeCCC
Q 047406 205 LFMRIWKLLRPGGIFVLEPQPW 226 (290)
Q Consensus 205 ~l~~~~~~LkpgG~l~i~~~~~ 226 (290)
++..+.++|+|||+|++++-.+
T Consensus 228 iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 228 LIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HHHHHHHHEEEEEEEEEEESCC
T ss_pred HHHHHHHhcCCCCEEEEecccC
Confidence 8999999999999999976544
No 238
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.01 E-value=1.4e-09 Score=104.84 Aligned_cols=115 Identities=23% Similarity=0.311 Sum_probs=83.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|..+..+++.++..+|+++|+|+.+++.++.++..
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~-------------------------------- 292 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKR-------------------------------- 292 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHH--------------------------------
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHH--------------------------------
Confidence 578899999999999999999988767999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC-CCCCceeEEEEc------hhhhhh---hhcCCchH-------HH
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD-SPEKYYDAILCL------SVTKWI---HLNWGDDG-------LI 203 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-~~~~~fD~I~~~------~vl~~~---~l~~~~~~-------~~ 203 (290)
.++ .+.+...|+.+... .+.+.||+|++. .+++.. ...+...+ +.
T Consensus 293 ----------------~g~--~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~ 354 (429)
T 1sqg_A 293 ----------------LGM--KATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQS 354 (429)
T ss_dssp ----------------TTC--CCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHH
T ss_pred ----------------cCC--CeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHH
Confidence 222 25777888765211 234689999962 111100 00011222 26
Q ss_pred HHHHHHHhhcCCCcEEEEeeCC
Q 047406 204 TLFMRIWKLLRPGGIFVLEPQP 225 (290)
Q Consensus 204 ~~l~~~~~~LkpgG~l~i~~~~ 225 (290)
.++.++.++|+|||++++++..
T Consensus 355 ~~L~~a~~~LkpGG~lvystcs 376 (429)
T 1sqg_A 355 EILDAIWPHLKTGGTLVYATCS 376 (429)
T ss_dssp HHHHHHGGGEEEEEEEEEEESC
T ss_pred HHHHHHHHhcCCCCEEEEEECC
Confidence 8899999999999999997643
No 239
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.99 E-value=3.7e-10 Score=108.93 Aligned_cols=97 Identities=20% Similarity=0.217 Sum_probs=74.0
Q ss_pred cCCCcEEEecCC------CChhhHHHHhH-cCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCC
Q 047406 61 FEGKDCLDIGCN------SGIITIQIAQK-FNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDG 133 (290)
Q Consensus 61 ~~~~~vLDiGcG------~G~~~~~la~~-~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (290)
.++.+||||||| +|..+..+++. ++..+|+|+|+|+.+. .
T Consensus 215 ~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~------------------------- 261 (419)
T 3sso_A 215 NQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------V------------------------- 261 (419)
T ss_dssp TSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------G-------------------------
T ss_pred CCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------h-------------------------
Confidence 467899999999 66666666665 4777999999999751 0
Q ss_pred cchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC------CCceeEEEEchhhhhhhhcCCchHHHHHHH
Q 047406 134 LEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP------EKYYDAILCLSVTKWIHLNWGDDGLITLFM 207 (290)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~------~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~ 207 (290)
...++.|.++|+.+ .+.. .++||+|+|... ++. .+....|.
T Consensus 262 -------------------------~~~rI~fv~GDa~d-lpf~~~l~~~d~sFDlVisdgs-H~~------~d~~~aL~ 308 (419)
T 3sso_A 262 -------------------------DELRIRTIQGDQND-AEFLDRIARRYGPFDIVIDDGS-HIN------AHVRTSFA 308 (419)
T ss_dssp -------------------------CBTTEEEEECCTTC-HHHHHHHHHHHCCEEEEEECSC-CCH------HHHHHHHH
T ss_pred -------------------------cCCCcEEEEecccc-cchhhhhhcccCCccEEEECCc-ccc------hhHHHHHH
Confidence 01358999999866 2333 478999999644 322 46789999
Q ss_pred HHHhhcCCCcEEEEee
Q 047406 208 RIWKLLRPGGIFVLEP 223 (290)
Q Consensus 208 ~~~~~LkpgG~l~i~~ 223 (290)
+++++|+|||++++..
T Consensus 309 el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 309 ALFPHVRPGGLYVIED 324 (419)
T ss_dssp HHGGGEEEEEEEEEEC
T ss_pred HHHHhcCCCeEEEEEe
Confidence 9999999999999964
No 240
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.98 E-value=1.1e-09 Score=100.07 Aligned_cols=103 Identities=13% Similarity=0.237 Sum_probs=74.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.++.++..
T Consensus 27 ~~~~~VLDiG~G~G~lt~~L~~~--~~~v~~vD~~~~~~~~a~~~~~~-------------------------------- 72 (285)
T 1zq9_A 27 RPTDVVLEVGPGTGNMTVKLLEK--AKKVVACELDPRLVAELHKRVQG-------------------------------- 72 (285)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHH--SSEEEEEESCHHHHHHHHHHHTT--------------------------------
T ss_pred CCCCEEEEEcCcccHHHHHHHhh--CCEEEEEECCHHHHHHHHHHHHh--------------------------------
Confidence 46789999999999999999987 34899999999999999886532
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHH-------------
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFM------------- 207 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~------------- 207 (290)
.++..++.+...|+.+. +. ..||+|+++...+|.. +.+..++.
T Consensus 73 ----------------~~~~~~v~~~~~D~~~~-~~--~~fD~vv~nlpy~~~~-----~~~~~~l~~~~~~~~~~~m~q 128 (285)
T 1zq9_A 73 ----------------TPVASKLQVLVGDVLKT-DL--PFFDTCVANLPYQISS-----PFVFKLLLHRPFFRCAILMFQ 128 (285)
T ss_dssp ----------------STTGGGEEEEESCTTTS-CC--CCCSEEEEECCGGGHH-----HHHHHHHHCSSCCSEEEEEEE
T ss_pred ----------------cCCCCceEEEEcceecc-cc--hhhcEEEEecCcccch-----HHHHHHHhcCcchhhhhhhhh
Confidence 22224688999998762 33 3799999976655432 33333332
Q ss_pred -HH--HhhcCCCcEEEE
Q 047406 208 -RI--WKLLRPGGIFVL 221 (290)
Q Consensus 208 -~~--~~~LkpgG~l~i 221 (290)
++ ..+++|||.++.
T Consensus 129 kEva~r~vlkPGg~~y~ 145 (285)
T 1zq9_A 129 REFALRLVAKPGDKLYC 145 (285)
T ss_dssp HHHHHHHHCCTTCTTCS
T ss_pred HHHHHHHhcCCCCcccc
Confidence 22 358999997643
No 241
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.94 E-value=5.4e-09 Score=101.19 Aligned_cols=162 Identities=16% Similarity=0.197 Sum_probs=101.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHc-------------CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKF-------------NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEV 127 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~-------------~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (290)
.++.+|||+|||+|.+++.+++.. ...+++|+|+++.+++.|+.++..+
T Consensus 170 ~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~------------------ 231 (445)
T 2okc_A 170 QMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLH------------------ 231 (445)
T ss_dssp CTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHT------------------
T ss_pred CCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHh------------------
Confidence 356899999999999998887653 2357999999999999999987652
Q ss_pred hhccCCcchhhhhHHHHHHhhhcCCCccccCcCc-ceeEeecccccCCCCCCCceeEEEEchhhhhhhh---c-------
Q 047406 128 IEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFD-IVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHL---N------- 196 (290)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l---~------- 196 (290)
++.. ...+.++|.... + ....||+|+++.......- .
T Consensus 232 ------------------------------g~~~~~~~i~~gD~l~~-~-~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~ 279 (445)
T 2okc_A 232 ------------------------------GIGTDRSPIVCEDSLEK-E-PSTLVDVILANPPFGTRPAGSVDINRPDFY 279 (445)
T ss_dssp ------------------------------TCCSSCCSEEECCTTTS-C-CSSCEEEEEECCCSSCCCTTCCCCCCTTSS
T ss_pred ------------------------------CCCcCCCCEeeCCCCCC-c-ccCCcCEEEECCCCCCcccccchhhHhhcC
Confidence 1211 356778887663 2 2348999999754321000 0
Q ss_pred C-CchHHHHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccCCCCC
Q 047406 197 W-GDDGLITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGSGGLS 275 (290)
Q Consensus 197 ~-~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~~~~~ 275 (290)
+ .......++..+.++|+|||++++..+...-+.. -....+.+.++++.++..+-....+-.
T Consensus 280 ~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p~~~L~~~----------------~~~~~iR~~L~~~~~l~~ii~lp~~~F- 342 (445)
T 2okc_A 280 VETKNNQLNFLQHMMLMLKTGGRAAVVLPDNVLFEA----------------GAGETIRKRLLQDFNLHTILRLPTGIF- 342 (445)
T ss_dssp SCCSCHHHHHHHHHHHHEEEEEEEEEEEEHHHHHCS----------------THHHHHHHHHHHHEEEEEEEECCSSSS-
T ss_pred CCCcchHHHHHHHHHHHhccCCEEEEEECCcccccC----------------cHHHHHHHHHHhcCcEEEEEeCCCCCc-
Confidence 0 0112347889999999999999986541000000 001234444667766665555444222
Q ss_pred CCCCCCCcceeeecC
Q 047406 276 SSKTGFNRPIFLFRK 290 (290)
Q Consensus 276 ~~~~~~~~~~~~~~k 290 (290)
..++....|.+|+|
T Consensus 343 -~~t~v~t~Il~~~k 356 (445)
T 2okc_A 343 -YAQGVKANVLFFSK 356 (445)
T ss_dssp -SSTTCCEEEEEEEE
T ss_pred -cCCCCCEEEEEEEC
Confidence 23455556666653
No 242
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.93 E-value=4.4e-09 Score=101.81 Aligned_cols=100 Identities=21% Similarity=0.248 Sum_probs=76.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|.++..+|+. ..+|+|+|+|+.+++.|+.++..
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~------------------------------- 334 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEI------------------------------- 334 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH-------------------------------
T ss_pred cCCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHH-------------------------------
Confidence 567899999999999999999886 45899999999999999998765
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH-HHHHHHHHhhcCCCcE
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL-ITLFMRIWKLLRPGGI 218 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~-~~~l~~~~~~LkpgG~ 218 (290)
+++. +.|...|+.+.. ...||+|++.... .+. ..++..+. .|+|+|+
T Consensus 335 -----------------ngl~--v~~~~~d~~~~~---~~~fD~Vv~dPPr---------~g~~~~~~~~l~-~l~p~gi 382 (425)
T 2jjq_A 335 -----------------NNVD--AEFEVASDREVS---VKGFDTVIVDPPR---------AGLHPRLVKRLN-REKPGVI 382 (425)
T ss_dssp -----------------HTCC--EEEEECCTTTCC---CTTCSEEEECCCT---------TCSCHHHHHHHH-HHCCSEE
T ss_pred -----------------cCCc--EEEEECChHHcC---ccCCCEEEEcCCc---------cchHHHHHHHHH-hcCCCcE
Confidence 3333 889999987642 2289999985432 111 23444443 5899999
Q ss_pred EEEeeC
Q 047406 219 FVLEPQ 224 (290)
Q Consensus 219 l~i~~~ 224 (290)
++++..
T Consensus 383 vyvsc~ 388 (425)
T 2jjq_A 383 VYVSCN 388 (425)
T ss_dssp EEEESC
T ss_pred EEEECC
Confidence 999864
No 243
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.92 E-value=8.3e-09 Score=93.31 Aligned_cols=103 Identities=17% Similarity=0.162 Sum_probs=79.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||.|.++..++ +...++|+|||+.+++.++.++..
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~-------------------------------- 148 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFARE-------------------------------- 148 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHH--------------------------------
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHh--------------------------------
Confidence 567899999999999988866 677999999999999999998765
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
.+ ....+...|.... .+.++||+|+.+-++|++. +......-++...|+++|+++
T Consensus 149 ----------------~g--~~~~~~v~D~~~~--~~~~~~DvvLllk~lh~LE-----~q~~~~~~~ll~aL~~~~vvV 203 (253)
T 3frh_A 149 ----------------KD--WDFTFALQDVLCA--PPAEAGDLALIFKLLPLLE-----REQAGSAMALLQSLNTPRMAV 203 (253)
T ss_dssp ----------------TT--CEEEEEECCTTTS--CCCCBCSEEEEESCHHHHH-----HHSTTHHHHHHHHCBCSEEEE
T ss_pred ----------------cC--CCceEEEeecccC--CCCCCcchHHHHHHHHHhh-----hhchhhHHHHHHHhcCCCEEE
Confidence 12 2477888888764 3456999999998876552 222233338888999998877
Q ss_pred Eee
Q 047406 221 LEP 223 (290)
Q Consensus 221 i~~ 223 (290)
-.+
T Consensus 204 sfP 206 (253)
T 3frh_A 204 SFP 206 (253)
T ss_dssp EEE
T ss_pred EcC
Confidence 654
No 244
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.92 E-value=8.2e-10 Score=100.26 Aligned_cols=100 Identities=16% Similarity=0.122 Sum_probs=76.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
..+.+|||||||+|..+..+++. + .+|+++|+|+.+++.|++++....
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~------------------------------ 118 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFH------------------------------ 118 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHH------------------------------
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhc------------------------------
Confidence 35689999999999999998887 6 799999999999999987542200
Q ss_pred HHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEE
Q 047406 141 AQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIF 219 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l 219 (290)
..+ ..++.+...|..+.. ++||+|++... +...++..+.++|+|||++
T Consensus 119 ----------------~~~~~~rv~~~~~D~~~~~----~~fD~Ii~d~~-----------dp~~~~~~~~~~L~pgG~l 167 (262)
T 2cmg_A 119 ----------------EVKNNKNFTHAKQLLDLDI----KKYDLIFCLQE-----------PDIHRIDGLKRMLKEDGVF 167 (262)
T ss_dssp ----------------HHHTCTTEEEESSGGGSCC----CCEEEEEESSC-----------CCHHHHHHHHTTEEEEEEE
T ss_pred ----------------cccCCCeEEEEechHHHHH----hhCCEEEECCC-----------ChHHHHHHHHHhcCCCcEE
Confidence 001 135788888887632 78999998521 1224899999999999999
Q ss_pred EEee
Q 047406 220 VLEP 223 (290)
Q Consensus 220 ~i~~ 223 (290)
++..
T Consensus 168 v~~~ 171 (262)
T 2cmg_A 168 ISVA 171 (262)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 9963
No 245
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.90 E-value=1.1e-08 Score=97.08 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=74.2
Q ss_pred CCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
++.+|||+|||+|.++..+++++ +..+++|+|+++.+++.|
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a-------------------------------------- 80 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP-------------------------------------- 80 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------------------------------------
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------------------------------------
Confidence 46799999999999999999876 456999999999776544
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhh--------h---------------cC
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIH--------L---------------NW 197 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~--------l---------------~~ 197 (290)
..+.+.+.|+.+. .+.+.||+|+|+.-..... + ..
T Consensus 81 --------------------~~~~~~~~D~~~~--~~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (421)
T 2ih2_A 81 --------------------PWAEGILADFLLW--EPGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKG 138 (421)
T ss_dssp --------------------TTEEEEESCGGGC--CCSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCT
T ss_pred --------------------CCCcEEeCChhhc--CccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccC
Confidence 1477888888763 2346899999952211000 0 00
Q ss_pred CchHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 198 GDDGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 198 ~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
..+....++..+.++|+|||.+++..+
T Consensus 139 ~~~~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 139 KYNLYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp TCCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CccHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 111234778999999999999999754
No 246
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.87 E-value=4.2e-10 Score=102.38 Aligned_cols=108 Identities=13% Similarity=0.072 Sum_probs=70.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||||||+|.++..+++. .+|+|+|+++ ++..+... .
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~--~------------------------------- 114 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEV--P------------------------------- 114 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCC--C-------------------------------
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhh--h-------------------------------
Confidence 457899999999999999998886 4899999988 32111100 0
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEe--ecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFK--QENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRP 215 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~Lkp 215 (290)
.. ......++.+. +.|+.+ + ++.+||+|+|... ++.. .+..+.. ..++..+.++|+|
T Consensus 115 ------------~~--~~~~~~~v~~~~~~~D~~~-l--~~~~fD~V~sd~~-~~~~-~~~~d~~~~l~~L~~~~r~Lkp 175 (265)
T 2oxt_A 115 ------------RI--TESYGWNIVKFKSRVDIHT-L--PVERTDVIMCDVG-ESSP-KWSVESERTIKILELLEKWKVK 175 (265)
T ss_dssp ------------CC--CCBTTGGGEEEECSCCTTT-S--CCCCCSEEEECCC-CCCS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------hh--hhccCCCeEEEecccCHhH-C--CCCCCcEEEEeCc-ccCC-ccchhHHHHHHHHHHHHHHhcc
Confidence 00 00111157788 888866 2 3578999999755 2111 1001111 2478999999999
Q ss_pred Cc--EEEEee
Q 047406 216 GG--IFVLEP 223 (290)
Q Consensus 216 gG--~l~i~~ 223 (290)
|| .|++..
T Consensus 176 GG~~~fv~kv 185 (265)
T 2oxt_A 176 NPSADFVVKV 185 (265)
T ss_dssp CTTCEEEEEE
T ss_pred CCCeEEEEEe
Confidence 99 998853
No 247
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.86 E-value=4.3e-10 Score=102.95 Aligned_cols=107 Identities=11% Similarity=0.007 Sum_probs=70.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
+.++.+|||+|||+|.++..+++. .+|+|+|+++ ++..+... .
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~--~------------------------------- 122 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEK--P------------------------------- 122 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCC--C-------------------------------
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhc--h-------------------------------
Confidence 357899999999999999998886 4899999988 42211110 0
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEe--ecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCC
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFK--QENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRP 215 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~Lkp 215 (290)
.. ......++.+. +.|+.+ + ++++||+|+|... ++.. .+..+.. ..++..+.++|+|
T Consensus 123 ------------~~--~~~~~~~v~~~~~~~D~~~-l--~~~~fD~Vvsd~~-~~~~-~~~~d~~~~l~~L~~~~r~Lkp 183 (276)
T 2wa2_A 123 ------------RL--VETFGWNLITFKSKVDVTK-M--EPFQADTVLCDIG-ESNP-TAAVEASRTLTVLNVISRWLEY 183 (276)
T ss_dssp ------------CC--CCCTTGGGEEEECSCCGGG-C--CCCCCSEEEECCC-CCCS-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------hh--hhhcCCCeEEEeccCcHhh-C--CCCCcCEEEECCC-cCCC-chhhhHHHHHHHHHHHHHHhcc
Confidence 00 00111257788 888866 3 3578999999755 2111 0000111 2478999999999
Q ss_pred Cc--EEEEe
Q 047406 216 GG--IFVLE 222 (290)
Q Consensus 216 gG--~l~i~ 222 (290)
|| .|++.
T Consensus 184 GG~~~~v~~ 192 (276)
T 2wa2_A 184 NQGCGFCVK 192 (276)
T ss_dssp STTCEEEEE
T ss_pred CCCcEEEEE
Confidence 99 88884
No 248
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.86 E-value=3.3e-09 Score=101.21 Aligned_cols=119 Identities=13% Similarity=0.056 Sum_probs=81.9
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
++.+|||+|||+|..++.++.+.+..+|+++|+++.+++.++.|+......... ..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~---------------~~~~~------ 105 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELR---------------ESKGR------ 105 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCE---------------ECSSE------
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccc---------------ccccc------
Confidence 789999999999999999999877678999999999999999998762000000 00000
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
+ ...++. ++.+.+.|...........||+|++..-. ....++..+.++|+|||++++
T Consensus 106 -----~-------~~~gl~-~i~v~~~Da~~~~~~~~~~fD~I~lDP~~----------~~~~~l~~a~~~lk~gG~l~v 162 (378)
T 2dul_A 106 -----A-------ILKGEK-TIVINHDDANRLMAERHRYFHFIDLDPFG----------SPMEFLDTALRSAKRRGILGV 162 (378)
T ss_dssp -----E-------EEESSS-EEEEEESCHHHHHHHSTTCEEEEEECCSS----------CCHHHHHHHHHHEEEEEEEEE
T ss_pred -----c-------cccCCC-ceEEEcCcHHHHHHhccCCCCEEEeCCCC----------CHHHHHHHHHHhcCCCCEEEE
Confidence 0 000332 27888888765321123579999953210 125778889999999999998
Q ss_pred eeC
Q 047406 222 EPQ 224 (290)
Q Consensus 222 ~~~ 224 (290)
...
T Consensus 163 t~t 165 (378)
T 2dul_A 163 TAT 165 (378)
T ss_dssp EEC
T ss_pred Eee
Confidence 764
No 249
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.85 E-value=3.3e-08 Score=94.53 Aligned_cols=115 Identities=23% Similarity=0.252 Sum_probs=85.7
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHcCC--------------------------------------ceEEEEeCCHHHH
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKFNC--------------------------------------RSILGIDIDSNRV 99 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~--------------------------------------~~i~g~Dis~~~l 99 (290)
..|.++..++|.+||+|.+++..|..... .+|+|+|+|+.++
T Consensus 190 ~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al 269 (384)
T 3ldg_A 190 SNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMV 269 (384)
T ss_dssp TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH
T ss_pred hCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHH
Confidence 45678899999999999999887765432 3599999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCC
Q 047406 100 ADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEK 179 (290)
Q Consensus 100 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 179 (290)
+.|+.|+.. .++.+.+.+.+.|+.+. +. ..
T Consensus 270 ~~Ar~Na~~------------------------------------------------~gl~~~I~~~~~D~~~l-~~-~~ 299 (384)
T 3ldg_A 270 EIARKNARE------------------------------------------------VGLEDVVKLKQMRLQDF-KT-NK 299 (384)
T ss_dssp HHHHHHHHH------------------------------------------------TTCTTTEEEEECCGGGC-CC-CC
T ss_pred HHHHHHHHH------------------------------------------------cCCCCceEEEECChHHC-Cc-cC
Confidence 999999876 44555699999999873 33 35
Q ss_pred ceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCC--CcEEEEeeC
Q 047406 180 YYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRP--GGIFVLEPQ 224 (290)
Q Consensus 180 ~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkp--gG~l~i~~~ 224 (290)
.||+|+|+.-.. ..+ .....+..++..+.+.|++ ||.+++..+
T Consensus 300 ~fD~Iv~NPPYG-~rl-~~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 344 (384)
T 3ldg_A 300 INGVLISNPPYG-ERL-LDDKAVDILYNEMGETFAPLKTWSQFILTN 344 (384)
T ss_dssp CSCEEEECCCCT-TTT-SCHHHHHHHHHHHHHHHTTCTTSEEEEEES
T ss_pred CcCEEEECCchh-hcc-CCHHHHHHHHHHHHHHHhhCCCcEEEEEEC
Confidence 899999974321 001 1235667788888878776 888888544
No 250
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.85 E-value=1.5e-08 Score=93.35 Aligned_cols=98 Identities=16% Similarity=0.202 Sum_probs=69.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++.++..
T Consensus 41 ~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~-------------------------------- 86 (299)
T 2h1r_A 41 KSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLY-------------------------------- 86 (299)
T ss_dssp CTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHH--------------------------------
T ss_pred CCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 57789999999999999999886 45899999999999999987654
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHH--------------
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLF-------------- 206 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l-------------- 206 (290)
.++ .++.+...|+.+. + ...||+|+|+...+|. .+.+..++
T Consensus 87 ----------------~~~-~~v~~~~~D~~~~-~--~~~~D~Vv~n~py~~~-----~~~~~~ll~~~~~~~~~~l~~Q 141 (299)
T 2h1r_A 87 ----------------EGY-NNLEVYEGDAIKT-V--FPKFDVCTANIPYKIS-----SPLIFKLISHRPLFKCAVLMFQ 141 (299)
T ss_dssp ----------------TTC-CCEEC----CCSS-C--CCCCSEEEEECCGGGH-----HHHHHHHHHCSSCCSEEEEEEE
T ss_pred ----------------cCC-CceEEEECchhhC-C--cccCCEEEEcCCcccc-----cHHHHHHHhcCCccceeeehHH
Confidence 222 3588888888663 2 3489999997655433 23444444
Q ss_pred -HHHHhhcCCCc
Q 047406 207 -MRIWKLLRPGG 217 (290)
Q Consensus 207 -~~~~~~LkpgG 217 (290)
+.+.++++++|
T Consensus 142 ~e~a~rlla~~G 153 (299)
T 2h1r_A 142 KEFAERMLANVG 153 (299)
T ss_dssp HHHHHHHTCCTT
T ss_pred HHHHHHHhcCCC
Confidence 34667888877
No 251
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.85 E-value=1.2e-08 Score=97.52 Aligned_cols=113 Identities=20% Similarity=0.221 Sum_probs=83.0
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCC--------------------------------------ceEEEEeCCHHHHH
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNC--------------------------------------RSILGIDIDSNRVA 100 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~--------------------------------------~~i~g~Dis~~~l~ 100 (290)
.|.++.++||++||+|.+++.+|..... ..|+|+|+|+.+++
T Consensus 192 ~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~ 271 (385)
T 3ldu_A 192 PWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESID 271 (385)
T ss_dssp CCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHH
T ss_pred CCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHH
Confidence 4567899999999999999988775321 46999999999999
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCc
Q 047406 101 DAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKY 180 (290)
Q Consensus 101 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~ 180 (290)
.|+.++.. .++.+.+.|.+.|+.+. +. ...
T Consensus 272 ~Ar~Na~~------------------------------------------------~gl~~~i~~~~~D~~~l-~~-~~~ 301 (385)
T 3ldu_A 272 IARENAEI------------------------------------------------AGVDEYIEFNVGDATQF-KS-EDE 301 (385)
T ss_dssp HHHHHHHH------------------------------------------------HTCGGGEEEEECCGGGC-CC-SCB
T ss_pred HHHHHHHH------------------------------------------------cCCCCceEEEECChhhc-Cc-CCC
Confidence 99999876 33444699999999873 33 358
Q ss_pred eeEEEEchhhh-hhhhcCCchHHHHHHHHHHhhcCC--CcEEEEeeC
Q 047406 181 YDAILCLSVTK-WIHLNWGDDGLITLFMRIWKLLRP--GGIFVLEPQ 224 (290)
Q Consensus 181 fD~I~~~~vl~-~~~l~~~~~~~~~~l~~~~~~Lkp--gG~l~i~~~ 224 (290)
||+|+|+.-.. .+. ..+.+..++..+.+.|++ |+.+++-.+
T Consensus 302 ~D~Iv~NPPyg~rl~---~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 345 (385)
T 3ldu_A 302 FGFIITNPPYGERLE---DKDSVKQLYKELGYAFRKLKNWSYYLITS 345 (385)
T ss_dssp SCEEEECCCCCCSHH---HHHHHHHHHHHHHHHHHTSBSCEEEEEES
T ss_pred CcEEEECCCCcCccC---CHHHHHHHHHHHHHHHhhCCCCEEEEEEC
Confidence 99999964421 010 124566777777777776 777777443
No 252
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.83 E-value=1.8e-08 Score=96.62 Aligned_cols=114 Identities=18% Similarity=0.248 Sum_probs=82.5
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHcCC--------------------------------------ceEEEEeCCHHHH
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKFNC--------------------------------------RSILGIDIDSNRV 99 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~--------------------------------------~~i~g~Dis~~~l 99 (290)
..|.++.++||++||+|.+++..|..... .+|+|+|+|+.++
T Consensus 197 ~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al 276 (393)
T 3k0b_A 197 TSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLI 276 (393)
T ss_dssp SCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHH
T ss_pred hCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHH
Confidence 34678899999999999998887765432 3599999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCC
Q 047406 100 ADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEK 179 (290)
Q Consensus 100 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~ 179 (290)
+.|+.++.. .++.+.+.+.+.|+.+. +. ..
T Consensus 277 ~~Ar~Na~~------------------------------------------------~gl~~~I~~~~~D~~~~-~~-~~ 306 (393)
T 3k0b_A 277 EIAKQNAVE------------------------------------------------AGLGDLITFRQLQVADF-QT-ED 306 (393)
T ss_dssp HHHHHHHHH------------------------------------------------TTCTTCSEEEECCGGGC-CC-CC
T ss_pred HHHHHHHHH------------------------------------------------cCCCCceEEEECChHhC-CC-CC
Confidence 999999876 34455689999999873 33 35
Q ss_pred ceeEEEEchhhh-hhhhcCCchHHHHHHHHHHhhcCC--CcEEEEeeC
Q 047406 180 YYDAILCLSVTK-WIHLNWGDDGLITLFMRIWKLLRP--GGIFVLEPQ 224 (290)
Q Consensus 180 ~fD~I~~~~vl~-~~~l~~~~~~~~~~l~~~~~~Lkp--gG~l~i~~~ 224 (290)
.||+|+|+.-.. .+. ..+.+..++..+.+.|++ ||.+++-.+
T Consensus 307 ~fD~Iv~NPPYg~rl~---~~~~l~~ly~~lg~~lk~~~g~~~~iit~ 351 (393)
T 3k0b_A 307 EYGVVVANPPYGERLE---DEEAVRQLYREMGIVYKRMPTWSVYVLTS 351 (393)
T ss_dssp CSCEEEECCCCCCSHH---HHHHHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CCCEEEECCCCccccC---CchhHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 899999973310 010 123456667766666665 888887544
No 253
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.82 E-value=1.1e-09 Score=101.46 Aligned_cols=104 Identities=11% Similarity=0.147 Sum_probs=68.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeC----CHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcc
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDI----DSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLE 135 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Di----s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (290)
+.++.+|||||||+|.++..+++. .+|+|+|+ ++..++.+..
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~------------------------------- 125 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPM------------------------------- 125 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCC-------------------------------
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHh-------------------------------
Confidence 457899999999999999998886 37999999 4432210000
Q ss_pred hhhhhHHHHHHhhhcCCCccccCcCcceeEeec-ccccCCCCCCCceeEEEEchhh---hhhhhcCCchHHHHHHHHHHh
Q 047406 136 KNVTAAQEEKKAISRNCSPAERNLFDIVSFKQE-NFVHGRDSPEKYYDAILCLSVT---KWIHLNWGDDGLITLFMRIWK 211 (290)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-d~~~~~~~~~~~fD~I~~~~vl---~~~~l~~~~~~~~~~l~~~~~ 211 (290)
...+ ...+.+.+. |+.+. +..+||+|+|.... +|.. +......+|..+.+
T Consensus 126 -------------------~~~~-~~~v~~~~~~D~~~l---~~~~fD~V~sd~~~~~g~~~~---d~~~~l~~L~~~~~ 179 (305)
T 2p41_A 126 -------------------STYG-WNLVRLQSGVDVFFI---PPERCDTLLCDIGESSPNPTV---EAGRTLRVLNLVEN 179 (305)
T ss_dssp -------------------CSTT-GGGEEEECSCCTTTS---CCCCCSEEEECCCCCCSSHHH---HHHHHHHHHHHHHH
T ss_pred -------------------hhcC-CCCeEEEeccccccC---CcCCCCEEEECCccccCcchh---hHHHHHHHHHHHHH
Confidence 0000 135788888 77652 34689999996543 2221 00111257888999
Q ss_pred hcCCCcEEEEee
Q 047406 212 LLRPGGIFVLEP 223 (290)
Q Consensus 212 ~LkpgG~l~i~~ 223 (290)
+|+|||.|++..
T Consensus 180 ~LkpGG~~v~kv 191 (305)
T 2p41_A 180 WLSNNTQFCVKV 191 (305)
T ss_dssp HCCTTCEEEEEE
T ss_pred HhCCCCEEEEEe
Confidence 999999999853
No 254
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.81 E-value=6.8e-09 Score=99.67 Aligned_cols=105 Identities=14% Similarity=0.066 Sum_probs=82.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
+|.+|||++||+|.+++.+|.+.. ..+|+++|+++.+++.++.|+..
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~-------------------------------- 99 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKL-------------------------------- 99 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHH--------------------------------
Confidence 578999999999999999998754 35899999999999999999887
Q ss_pred HHHHHHhhhcCCCccccCcCcc-eeEeecccccCCC-CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDI-VSFKQENFVHGRD-SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
+++.+. +.+...|..+.+. ...+.||+|++... + ....++..+.++|+|||+
T Consensus 100 ----------------Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP~--------g--~~~~~l~~a~~~Lk~gGl 153 (392)
T 3axs_A 100 ----------------NNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDPF--------G--TPVPFIESVALSMKRGGI 153 (392)
T ss_dssp ----------------TTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECCS--------S--CCHHHHHHHHHHEEEEEE
T ss_pred ----------------hCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECCC--------c--CHHHHHHHHHHHhCCCCE
Confidence 445444 8888888755322 22467999997541 1 124578889999999999
Q ss_pred EEEeeC
Q 047406 219 FVLEPQ 224 (290)
Q Consensus 219 l~i~~~ 224 (290)
++++..
T Consensus 154 l~~t~t 159 (392)
T 3axs_A 154 LSLTAT 159 (392)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 999764
No 255
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.77 E-value=1.9e-07 Score=86.66 Aligned_cols=115 Identities=15% Similarity=0.085 Sum_probs=78.9
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
..+|.+|||+|||+|..+..+|..++ ...|+++|+++.+++.++.++..
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r------------------------------ 149 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR------------------------------ 149 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHH------------------------------
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHH------------------------------
Confidence 35789999999999999999998764 46899999999999999998876
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC--CCceeEEEEc------hhhhh-hhhc----CCc------
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP--EKYYDAILCL------SVTKW-IHLN----WGD------ 199 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~--~~~fD~I~~~------~vl~~-~~l~----~~~------ 199 (290)
.++ .++.+...|+.+..+.. ...||.|++. .++.. .... |..
T Consensus 150 ------------------~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l 210 (309)
T 2b9e_A 150 ------------------AGV-SCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHAL 210 (309)
T ss_dssp ------------------TTC-CSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHH
T ss_pred ------------------cCC-CeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHH
Confidence 223 25888888887632111 1579999972 11110 0111 111
Q ss_pred -hHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 200 -DGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 200 -~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
..+.++|..+.++++ ||+|+.++-
T Consensus 211 ~~~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 211 AGFQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp HHHHHHHHHHHTTCTT-CCEEEEEES
T ss_pred HHHHHHHHHHHHhccC-CCEEEEECC
Confidence 123567888888886 999988654
No 256
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.74 E-value=1.2e-08 Score=94.17 Aligned_cols=122 Identities=12% Similarity=0.066 Sum_probs=80.8
Q ss_pred ccCCCcEEEecCCC------ChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccC
Q 047406 60 WFEGKDCLDIGCNS------GIITIQIAQKFN-CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGD 132 (290)
Q Consensus 60 ~~~~~~vLDiGcG~------G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (290)
+.++.+|||+|||+ |. ..+++..+ ..+|+|+|+|+. +
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v--------------------------------- 104 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V--------------------------------- 104 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------------------------
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------------------------
Confidence 46789999999955 55 44566665 468999999985 0
Q ss_pred CcchhhhhHHHHHHhhhcCCCccccCcCcceeE-eecccccCCCCCCCceeEEEEchhhhhh---hhcC--CchHHHHHH
Q 047406 133 GLEKNVTAAQEEKKAISRNCSPAERNLFDIVSF-KQENFVHGRDSPEKYYDAILCLSVTKWI---HLNW--GDDGLITLF 206 (290)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~d~~~~~~~~~~~fD~I~~~~vl~~~---~l~~--~~~~~~~~l 206 (290)
.++.+ .++|+.+. +. .++||+|+|....++. .++. ..+....++
T Consensus 105 ----------------------------~~v~~~i~gD~~~~-~~-~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l 154 (290)
T 2xyq_A 105 ----------------------------SDADSTLIGDCATV-HT-ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLC 154 (290)
T ss_dssp ----------------------------CSSSEEEESCGGGC-CC-SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHH
T ss_pred ----------------------------CCCEEEEECccccC-Cc-cCcccEEEEcCCccccccccccccchHHHHHHHH
Confidence 13667 88898762 22 3689999996432211 0110 123346899
Q ss_pred HHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEec
Q 047406 207 MRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 207 ~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
..+.++|+|||.|++..... -...++.+ ++++.||..++..
T Consensus 155 ~~a~r~LkpGG~~v~~~~~~---------------------~~~~~l~~-~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 155 GFIKQKLALGGSIAVKITEH---------------------SWNADLYK-LMGHFSWWTAFVT 195 (290)
T ss_dssp HHHHHHEEEEEEEEEEECSS---------------------SCCHHHHH-HHTTEEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEEEecc---------------------CCHHHHHH-HHHHcCCcEEEEE
Confidence 99999999999999953210 11124444 6788889877776
No 257
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.67 E-value=4.9e-07 Score=90.09 Aligned_cols=115 Identities=11% Similarity=0.154 Sum_probs=81.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC---CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN---CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~---~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
++.+|+|.+||+|.+.+.+++... ..+++|+|+++.++..|+.++..+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~----------------------------- 271 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILH----------------------------- 271 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHT-----------------------------
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHc-----------------------------
Confidence 678999999999999888877642 458999999999999999987652
Q ss_pred hhHHHHHHhhhcCCCccccCcC-cceeEeecccccC-CC-CCCCceeEEEEchhh--hhh------------h---hcCC
Q 047406 139 TAAQEEKKAISRNCSPAERNLF-DIVSFKQENFVHG-RD-SPEKYYDAILCLSVT--KWI------------H---LNWG 198 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~d~~~~-~~-~~~~~fD~I~~~~vl--~~~------------~---l~~~ 198 (290)
++. ..+.+.++|.... ++ .....||+|+++.-. .|- . +.-.
T Consensus 272 -------------------gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~ 332 (542)
T 3lkd_A 272 -------------------GVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPK 332 (542)
T ss_dssp -------------------TCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCT
T ss_pred -------------------CCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCC
Confidence 221 2467788887653 22 345789999996322 120 0 0000
Q ss_pred chHHHHHHHHHHhhcC-CCcEEEEeeC
Q 047406 199 DDGLITLFMRIWKLLR-PGGIFVLEPQ 224 (290)
Q Consensus 199 ~~~~~~~l~~~~~~Lk-pgG~l~i~~~ 224 (290)
...-..++..+.+.|+ |||++++..+
T Consensus 333 s~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 333 SKADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp TCCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred chhhHHHHHHHHHHhCCCceeEEEEec
Confidence 1111358899999999 9999988654
No 258
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.66 E-value=2.3e-07 Score=92.44 Aligned_cols=113 Identities=13% Similarity=0.089 Sum_probs=76.4
Q ss_pred CcEEEecCCCChhhHHHHhHcC---------------CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhh
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN---------------CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVI 128 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~---------------~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (290)
.+|+|.+||+|.+.+.++.... ..+++|+|+++.++..|+.++..+
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~------------------- 306 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIR------------------- 306 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHT-------------------
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHh-------------------
Confidence 3999999999998887655432 348999999999999999988762
Q ss_pred hccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhh---hhh-----------
Q 047406 129 EKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTK---WIH----------- 194 (290)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~---~~~----------- 194 (290)
++...+.+.++|.+.....+..+||+|+++.-.. |-.
T Consensus 307 -----------------------------gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~ 357 (544)
T 3khk_A 307 -----------------------------GIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTI 357 (544)
T ss_dssp -----------------------------TCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEE
T ss_pred -----------------------------CCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhc
Confidence 2222344466776553233457899999963321 110
Q ss_pred ---------hcCCchHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 195 ---------LNWGDDGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 195 ---------l~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
+.-....-..++..+.+.|+|||++++..+
T Consensus 358 g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 358 NTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp CCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 000011123688999999999999988654
No 259
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.66 E-value=9.8e-08 Score=95.00 Aligned_cols=120 Identities=11% Similarity=0.019 Sum_probs=79.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC------------------CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN------------------CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANA 122 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~------------------~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~ 122 (290)
.++.+|+|.+||+|.+.+.++.... ..+++|+|+++.+++.|+.++..++..
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~---------- 237 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIE---------- 237 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCC----------
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCC----------
Confidence 3578999999999999888776532 137999999999999999887652100
Q ss_pred chhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhh-----cC
Q 047406 123 SRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHL-----NW 197 (290)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l-----~~ 197 (290)
........+.+.|.+.........||+|+++.-.....- ++
T Consensus 238 ----------------------------------~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~ 283 (541)
T 2ar0_A 238 ----------------------------------GNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTF 283 (541)
T ss_dssp ----------------------------------CBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCC
T ss_pred ----------------------------------ccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhc
Confidence 000012556777765421123468999999754321000 00
Q ss_pred ---CchHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 198 ---GDDGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 198 ---~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
.......++..+.+.|+|||++++..+
T Consensus 284 ~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 284 VHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp SSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 012234788999999999999999754
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.62 E-value=2.4e-07 Score=85.63 Aligned_cols=76 Identities=16% Similarity=0.200 Sum_probs=62.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||||||+|.++..+++. +.+|+++|+|+.+++.++.++..
T Consensus 49 ~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~-------------------------------- 94 (295)
T 3gru_A 49 TKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKEL-------------------------------- 94 (295)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHH--------------------------------
T ss_pred CCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhcc--------------------------------
Confidence 57789999999999999999987 56999999999999999887643
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhh
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVT 190 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl 190 (290)
..++.+..+|+.+ .+.+..+||+|+++...
T Consensus 95 -------------------~~~v~vi~gD~l~-~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 95 -------------------YNNIEIIWGDALK-VDLNKLDFNKVVANLPY 124 (295)
T ss_dssp -------------------CSSEEEEESCTTT-SCGGGSCCSEEEEECCG
T ss_pred -------------------CCCeEEEECchhh-CCcccCCccEEEEeCcc
Confidence 1358899999877 34445679999987443
No 261
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.61 E-value=3e-08 Score=93.75 Aligned_cols=45 Identities=22% Similarity=0.448 Sum_probs=40.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.+.+|||+|||+|.+++.+|.. ..+|+|+|+|+.+++.|+.++..
T Consensus 213 ~~~~vLDl~cG~G~~~l~la~~--~~~V~gvd~~~~ai~~a~~n~~~ 257 (369)
T 3bt7_A 213 SKGDLLELYCGNGNFSLALARN--FDRVLATEIAKPSVAAAQYNIAA 257 (369)
T ss_dssp CCSEEEEESCTTSHHHHHHGGG--SSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCEEEEccCCCCHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHH
Confidence 4688999999999999998874 45899999999999999998875
No 262
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.61 E-value=3.5e-09 Score=94.16 Aligned_cols=105 Identities=16% Similarity=0.151 Sum_probs=71.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|+.++.
T Consensus 28 ~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~--------------------------------- 72 (245)
T 1yub_A 28 KETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLK--------------------------------- 72 (245)
T ss_dssp CSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTT---------------------------------
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhc---------------------------------
Confidence 467899999999999999999873 689999999988877655321
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-CCceeEEEEchhhhhhhhcCCchHH----------HHHH---
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-EKYYDAILCLSVTKWIHLNWGDDGL----------ITLF--- 206 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-~~~fD~I~~~~vl~~~~l~~~~~~~----------~~~l--- 206 (290)
...++.+...|+.+ .+.+ .++| .|+++.-.. .....+ ...+
T Consensus 73 ------------------~~~~v~~~~~D~~~-~~~~~~~~f-~vv~n~Py~-----~~~~~~~~~~~~~~~~~~~lm~q 127 (245)
T 1yub_A 73 ------------------LNTRVTLIHQDILQ-FQFPNKQRY-KIVGNIPYH-----LSTQIIKKVVFESRASDIYLIVE 127 (245)
T ss_dssp ------------------TCSEEEECCSCCTT-TTCCCSSEE-EEEEECCSS-----SCHHHHHHHHHHCCCEEEEEEEE
T ss_pred ------------------cCCceEEEECChhh-cCcccCCCc-EEEEeCCcc-----ccHHHHHHHHhCCCCCeEEEEee
Confidence 12358899999876 3433 2578 566542110 001111 1223
Q ss_pred -HHHHhhcCCCcEEEEeeCC
Q 047406 207 -MRIWKLLRPGGIFVLEPQP 225 (290)
Q Consensus 207 -~~~~~~LkpgG~l~i~~~~ 225 (290)
+.+.++|+|||.+++..+.
T Consensus 128 ~e~a~rll~~~G~l~v~~~~ 147 (245)
T 1yub_A 128 EGFYKRTLDIHRTLGLLLHT 147 (245)
T ss_dssp SSHHHHHHCGGGSHHHHTTT
T ss_pred HHHHHHHhCCCCchhhhhee
Confidence 6689999999998885544
No 263
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.61 E-value=1.7e-07 Score=83.59 Aligned_cols=44 Identities=23% Similarity=0.370 Sum_probs=39.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++.+|||||||+|.++..+++.. .+|+|+|+|+.+++.++.++
T Consensus 29 ~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~ 72 (244)
T 1qam_A 29 NEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKL 72 (244)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHT
T ss_pred CCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhh
Confidence 467899999999999999999874 58999999999999998753
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.59 E-value=4e-08 Score=93.41 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=76.9
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
.+.+||+||||+|..+..+++.. ..+|+++|+|+.+++.|++++....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~-~~~Vt~VEID~~vie~Ar~~~~~l~------------------------------- 235 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTC------------------------------- 235 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC---------------------------------
T ss_pred CCCEEEEEECChhHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhc-------------------------------
Confidence 56899999999999999988864 4789999999999999998753200
Q ss_pred HHHHHhhhcCCCccccCcC----cceeEeecccccCCCC---CCCceeEEEEchhh-hh----hhhcCCchHHHHHHHHH
Q 047406 142 QEEKKAISRNCSPAERNLF----DIVSFKQENFVHGRDS---PEKYYDAILCLSVT-KW----IHLNWGDDGLITLFMRI 209 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~----~~i~~~~~d~~~~~~~---~~~~fD~I~~~~vl-~~----~~l~~~~~~~~~~l~~~ 209 (290)
...+. .++.+...|....+.. ..++||+|++-..- .. .++ +..+-...++..+
T Consensus 236 --------------~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L-~t~eFy~~~~~~~ 300 (364)
T 2qfm_A 236 --------------GDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEED-STWEFLRLILDLS 300 (364)
T ss_dssp ----------------CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC-----CHHHHHHHHHHHH
T ss_pred --------------cccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhh-hHHHHHHHHHHHH
Confidence 00011 2588899998764321 24789999985321 00 000 0112223444444
Q ss_pred HhhcCCCcEEEEee
Q 047406 210 WKLLRPGGIFVLEP 223 (290)
Q Consensus 210 ~~~LkpgG~l~i~~ 223 (290)
.++|+|||++++..
T Consensus 301 ~~~L~pgGilv~qs 314 (364)
T 2qfm_A 301 MKVLKQDGKYFTQG 314 (364)
T ss_dssp HHTEEEEEEEEEEE
T ss_pred HhhCCCCcEEEEEc
Confidence 99999999999964
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.58 E-value=4.7e-07 Score=92.79 Aligned_cols=117 Identities=23% Similarity=0.264 Sum_probs=81.0
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHc------------------------------------------CCceEEEEeCC
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKF------------------------------------------NCRSILGIDID 95 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~------------------------------------------~~~~i~g~Dis 95 (290)
..|.++.++||.+||+|.+++..|... +...|+|+|+|
T Consensus 186 ~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did 265 (703)
T 3v97_A 186 SGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSD 265 (703)
T ss_dssp TTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESC
T ss_pred hCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECC
Confidence 346788999999999999998877642 12479999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCC-
Q 047406 96 SNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGR- 174 (290)
Q Consensus 96 ~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~- 174 (290)
+.+++.|+.|+.. .++.+.+.|.+.|+.+..
T Consensus 266 ~~av~~A~~N~~~------------------------------------------------agv~~~i~~~~~D~~~~~~ 297 (703)
T 3v97_A 266 ARVIQRARTNARL------------------------------------------------AGIGELITFEVKDVAQLTN 297 (703)
T ss_dssp HHHHHHHHHHHHH------------------------------------------------TTCGGGEEEEECCGGGCCC
T ss_pred HHHHHHHHHHHHH------------------------------------------------cCCCCceEEEECChhhCcc
Confidence 9999999999887 344556899999998732
Q ss_pred CCCCCceeEEEEchhhhhhhhcCCchHHHHHHH---HHHhhcCCCcEEEEeeC
Q 047406 175 DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFM---RIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 175 ~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~---~~~~~LkpgG~l~i~~~ 224 (290)
+...+.||+|+|+.-.. ..+ .....+..++. ++.+.+.|||.+++-.+
T Consensus 298 ~~~~~~~d~Iv~NPPYG-~Rl-g~~~~l~~ly~~l~~~lk~~~~g~~~~ilt~ 348 (703)
T 3v97_A 298 PLPKGPYGTVLSNPPYG-ERL-DSEPALIALHSLLGRIMKNQFGGWNLSLFSA 348 (703)
T ss_dssp SCTTCCCCEEEECCCCC-C----CCHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred ccccCCCCEEEeCCCcc-ccc-cchhHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 22233899999973320 000 12234444444 44455568999999554
No 266
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.45 E-value=1.3e-06 Score=80.87 Aligned_cols=115 Identities=21% Similarity=0.206 Sum_probs=84.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
+..++||-||.|.|..+..+++..+..+|+.+||++.+++.|++.+.....
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~----------------------------- 132 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNA----------------------------- 132 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHT-----------------------------
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccc-----------------------------
Confidence 466899999999999999998876667999999999999999987654210
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCcE
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGGI 218 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG~ 218 (290)
..--..++.+...|....+....++||+|+.-..-. . .....+ ..++..+.++|+|||+
T Consensus 133 ---------------~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp-~---~~~~~L~t~eFy~~~~~~L~p~Gv 193 (294)
T 3o4f_A 133 ---------------GSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDP-I---GPGESLFTSAFYEGCKRCLNPGGI 193 (294)
T ss_dssp ---------------TGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCC-C---CTTCCSSCCHHHHHHHHTEEEEEE
T ss_pred ---------------cccCCCcEEEEechHHHHHhhccccCCEEEEeCCCc-C---CCchhhcCHHHHHHHHHHhCCCCE
Confidence 000123688899998886666678999999732110 0 000111 5788999999999999
Q ss_pred EEEee
Q 047406 219 FVLEP 223 (290)
Q Consensus 219 l~i~~ 223 (290)
++...
T Consensus 194 ~v~q~ 198 (294)
T 3o4f_A 194 FVAQN 198 (294)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99953
No 267
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.44 E-value=2.1e-06 Score=75.26 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=38.3
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.+...++|||+||| .-++.+|+ .++.+|+.+|.+++..+.|+.++..
T Consensus 27 ~l~~a~~VLEiGtG--ySTl~lA~-~~~g~VvtvE~d~~~~~~ar~~l~~ 73 (202)
T 3cvo_A 27 AYEEAEVILEYGSG--GSTVVAAE-LPGKHVTSVESDRAWARMMKAWLAA 73 (202)
T ss_dssp HHHHCSEEEEESCS--HHHHHHHT-STTCEEEEEESCHHHHHHHHHHHHH
T ss_pred HhhCCCEEEEECch--HHHHHHHH-cCCCEEEEEeCCHHHHHHHHHHHHH
Confidence 44567899999985 56666666 3456999999999999999998876
No 268
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.42 E-value=7.8e-08 Score=87.02 Aligned_cols=46 Identities=9% Similarity=0.061 Sum_probs=39.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCH-------HHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDS-------NRVADAYWHLRK 108 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~-------~~l~~a~~~~~~ 108 (290)
.++.+|||+|||+|..++.+|.. ..+|+++|+|+ .+++.|+.++..
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~ 134 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPET 134 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHh
Confidence 46789999999999999999886 35899999999 888888887654
No 269
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.41 E-value=3.1e-07 Score=88.64 Aligned_cols=77 Identities=17% Similarity=0.091 Sum_probs=61.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
+|.+|||+|||+|..++.+++. ..+|+++|+|+.+++.|+.++...
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~-------------------------------- 138 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLL-------------------------------- 138 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHH--------------------------------
T ss_pred CCCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHh--------------------------------
Confidence 4899999999999999998876 459999999999999999998751
Q ss_pred HHHHHhhhcCCCccccCcCcceeEeecccccCCCC-CCCceeEEEEc
Q 047406 142 QEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDS-PEKYYDAILCL 187 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~-~~~~fD~I~~~ 187 (290)
..++ .++.+.+.|+.+.++. +..+||+|++.
T Consensus 139 --------------~~gl-~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 139 --------------LNEG-KDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp --------------SCTT-CEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred --------------ccCC-CcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 0033 4689999998763222 23579999994
No 270
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.40 E-value=5.2e-07 Score=82.35 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=44.8
Q ss_pred ccCCCCCchh-hHHhhhh--ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHH
Q 047406 43 IGQGLNEDPR-FKVLKKE--WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 43 ~~~~~~~~~~-l~~l~~~--~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~ 105 (290)
++|+...++. ++.+... +.++ +|||||||+|.++..+++. +.+|+|+|+|+.+++.++++
T Consensus 25 ~GQnfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~--~~~V~avEid~~~~~~l~~~ 87 (271)
T 3fut_A 25 FGQNFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA--GAEVTAIEKDLRLRPVLEET 87 (271)
T ss_dssp SSCCEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT--TCCEEEEESCGGGHHHHHHH
T ss_pred CCccccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc--CCEEEEEECCHHHHHHHHHh
Confidence 3444444433 3333332 3567 9999999999999999987 35899999999999999875
No 271
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.39 E-value=2.3e-07 Score=85.99 Aligned_cols=47 Identities=28% Similarity=0.231 Sum_probs=42.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
.++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.|+.++.
T Consensus 25 ~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~ 71 (301)
T 1m6y_A 25 EDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLK 71 (301)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTG
T ss_pred CCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHH
Confidence 47889999999999999999998776799999999999999998754
No 272
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.37 E-value=7e-07 Score=80.87 Aligned_cols=155 Identities=14% Similarity=0.052 Sum_probs=85.3
Q ss_pred CCCcEEEecCCCChhhHHHHhH-------cCC-----ceEEEEeCCH---HHHHHHHHHHHHHHHhhhhhhhhhhhchhh
Q 047406 62 EGKDCLDIGCNSGIITIQIAQK-------FNC-----RSILGIDIDS---NRVADAYWHLRKIVRTEHNEKRRANASRVE 126 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~-------~~~-----~~i~g~Dis~---~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~ 126 (290)
++.+|||+|||+|..+..+++. .|. .+++++|..| +.+..+..+.... ...-+..+...|
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l-----~~~a~~l~~~w~ 134 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPEL-----APWAEQLQAQWP 134 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGG-----HHHHHHHHHTCC
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhH-----HHHHHHHHHhcc
Confidence 4479999999999988776654 342 4899999877 6666553221000 000000000000
Q ss_pred hhhccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCC----CceeEEEEchhhhhhhhcCCchH-
Q 047406 127 VIEKGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPE----KYYDAILCLSVTKWIHLNWGDDG- 201 (290)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~----~~fD~I~~~~vl~~~~l~~~~~~- 201 (290)
..-.|+. + +.. .+-..++.+..+|..+.++... .+||+|+.-.... . ..+.
T Consensus 135 ~~~~g~~--r---------------~~~--~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp----~-~~p~l 190 (257)
T 2qy6_A 135 MPLPGCH--R---------------LLL--DEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAP----A-KNPDM 190 (257)
T ss_dssp CSCSEEE--E---------------EEE--C--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCT----T-TCGGG
T ss_pred ccccchh--h---------------eec--cCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCc----c-cChhh
Confidence 0000000 0 000 0011357788888876444322 2799999732110 0 0112
Q ss_pred -HHHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhccccccccCchhHHHHHHHHcCCeeeEeccC
Q 047406 202 -LITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKLYPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 202 -~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
...+|..+.++|+|||+|+.- ......+..|..+||++.+.-+.
T Consensus 191 w~~~~l~~l~~~L~pGG~l~ty--------------------------saa~~vrr~L~~aGF~v~~~~g~ 235 (257)
T 2qy6_A 191 WTQNLFNAMARLARPGGTLATF--------------------------TSAGFVRRGLQEAGFTMQKRKGF 235 (257)
T ss_dssp CCHHHHHHHHHHEEEEEEEEES--------------------------CCBHHHHHHHHHHTEEEEEECCS
T ss_pred cCHHHHHHHHHHcCCCcEEEEE--------------------------eCCHHHHHHHHHCCCEEEeCCCC
Confidence 257899999999999999872 12233445788899998876554
No 273
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.37 E-value=6.9e-07 Score=80.73 Aligned_cols=44 Identities=20% Similarity=0.276 Sum_probs=39.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++.+|||||||+|.++..+++. +.+|+++|+|+.+++.+++++
T Consensus 28 ~~~~~VLEIG~G~G~lt~~La~~--~~~V~avEid~~~~~~~~~~~ 71 (255)
T 3tqs_A 28 QKTDTLVEIGPGRGALTDYLLTE--CDNLALVEIDRDLVAFLQKKY 71 (255)
T ss_dssp CTTCEEEEECCTTTTTHHHHTTT--SSEEEEEECCHHHHHHHHHHH
T ss_pred CCcCEEEEEcccccHHHHHHHHh--CCEEEEEECCHHHHHHHHHHH
Confidence 56789999999999999999987 358999999999999998864
No 274
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.36 E-value=1.8e-06 Score=89.41 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=37.3
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC---CceEEEEeCCHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN---CRSILGIDIDSNRVADAY 103 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~---~~~i~g~Dis~~~l~~a~ 103 (290)
.++.+|||.|||+|.+++.++...+ ..+++|+|+++.+++.|+
T Consensus 320 ~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK 365 (878)
T 3s1s_A 320 TEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLS 365 (878)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHH
T ss_pred CCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHH
Confidence 3578999999999999999888764 358999999999999984
No 275
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.33 E-value=2.5e-06 Score=81.30 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=42.5
Q ss_pred eecccccCCCCCCCceeEEEEchhhhhhhhc-----------C--C-------------------chHHHHHHHHHHhhc
Q 047406 166 KQENFVHGRDSPEKYYDAILCLSVTKWIHLN-----------W--G-------------------DDGLITLFMRIWKLL 213 (290)
Q Consensus 166 ~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~-----------~--~-------------------~~~~~~~l~~~~~~L 213 (290)
..+.|.. ...|.+++|+|+|+.++||+.=. | + ..++..+|+..++.|
T Consensus 137 vpgSFy~-rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra~eL 215 (374)
T 3b5i_A 137 VPGSFYR-RLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARAAEV 215 (374)
T ss_dssp EESCTTS-CCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred cChhhhc-ccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3444544 34678999999999999997510 0 0 025677899999999
Q ss_pred CCCcEEEEeeC
Q 047406 214 RPGGIFVLEPQ 224 (290)
Q Consensus 214 kpgG~l~i~~~ 224 (290)
+|||.++++..
T Consensus 216 ~pGG~mvl~~~ 226 (374)
T 3b5i_A 216 KRGGAMFLVCL 226 (374)
T ss_dssp EEEEEEEEEEE
T ss_pred CCCCEEEEEEe
Confidence 99999999543
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.30 E-value=1.6e-06 Score=87.83 Aligned_cols=103 Identities=10% Similarity=0.095 Sum_probs=71.4
Q ss_pred CCcEEEecCCCChh---hHHHHhHcCC-ceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 63 GKDCLDIGCNSGII---TIQIAQKFNC-RSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 63 ~~~vLDiGcG~G~~---~~~la~~~~~-~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
+..|||||||+|.+ ++..++.... .+|+++|.|+.+ ..|++....
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v~~------------------------------ 406 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENWQF------------------------------ 406 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHHHH------------------------------
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHHHh------------------------------
Confidence 35799999999988 4443333221 278999999854 456655443
Q ss_pred hhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 139 TAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
+++.+.|++.++|+.+ +..| .++|+|+|= |+......+.+..++....+.|+|||+
T Consensus 407 ------------------N~~~dkVtVI~gd~ee-v~LP-EKVDIIVSE----wMG~fLl~E~mlevL~Ardr~LKPgGi 462 (637)
T 4gqb_A 407 ------------------EEWGSQVTVVSSDMRE-WVAP-EKADIIVSE----LLGSFADNELSPECLDGAQHFLKDDGV 462 (637)
T ss_dssp ------------------HTTGGGEEEEESCTTT-CCCS-SCEEEEECC----CCBTTBGGGCHHHHHHHHGGGEEEEEE
T ss_pred ------------------ccCCCeEEEEeCccee-ccCC-cccCEEEEE----cCcccccccCCHHHHHHHHHhcCCCcE
Confidence 5667789999999987 3333 689999982 222222224556788888999999998
Q ss_pred EE
Q 047406 219 FV 220 (290)
Q Consensus 219 l~ 220 (290)
++
T Consensus 463 mi 464 (637)
T 4gqb_A 463 SI 464 (637)
T ss_dssp EE
T ss_pred Ec
Confidence 65
No 277
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.26 E-value=1.6e-05 Score=76.10 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=40.2
Q ss_pred ecccccCCCCCCCceeEEEEchhhhhhhhcC-C--------------------------------chHHHHHHHHHHhhc
Q 047406 167 QENFVHGRDSPEKYYDAILCLSVTKWIHLNW-G--------------------------------DDGLITLFMRIWKLL 213 (290)
Q Consensus 167 ~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~-~--------------------------------~~~~~~~l~~~~~~L 213 (290)
.+.|.. ...|.+++|+|+|+.++||+.=-- . ..++..+|+..++.|
T Consensus 137 pgSFy~-rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra~eL 215 (384)
T 2efj_A 137 PGSFYS-RLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHSEEL 215 (384)
T ss_dssp CSCTTS-CCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHE
T ss_pred chhhhh-ccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444 356789999999999999974110 0 012234577789999
Q ss_pred CCCcEEEEeeCC
Q 047406 214 RPGGIFVLEPQP 225 (290)
Q Consensus 214 kpgG~l~i~~~~ 225 (290)
+|||.++++...
T Consensus 216 ~pGG~mvl~~~g 227 (384)
T 2efj_A 216 ISRGRMLLTFIC 227 (384)
T ss_dssp EEEEEEEEEEEC
T ss_pred ccCCeEEEEEec
Confidence 999999996543
No 278
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.24 E-value=4.5e-06 Score=79.16 Aligned_cols=124 Identities=19% Similarity=0.115 Sum_probs=84.8
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhh
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVT 139 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (290)
..+|.+|||+.+|+|.=+..+|+.++...|++.|+|+..++..+.++...+..
T Consensus 146 ~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~--------------------------- 198 (359)
T 4fzv_A 146 LQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPE--------------------------- 198 (359)
T ss_dssp CCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCT---------------------------
T ss_pred CCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhh---------------------------
Confidence 46899999999999999999998776668999999999999999988763210
Q ss_pred hHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEc----hh----hhh-hhhc--CCc-------hH
Q 047406 140 AAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCL----SV----TKW-IHLN--WGD-------DG 201 (290)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~----~v----l~~-~~l~--~~~-------~~ 201 (290)
......++.+...|.........+.||.|++- .. +.. ..+. |.. .-
T Consensus 199 ----------------~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~l 262 (359)
T 4fzv_A 199 ----------------EIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVL 262 (359)
T ss_dssp ----------------TTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHH
T ss_pred ----------------hhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHH
Confidence 00112346677777654211234689999972 11 100 0000 111 23
Q ss_pred HHHHHHHHHhhcCCCcEEEEeeCCC
Q 047406 202 LITLFMRIWKLLRPGGIFVLEPQPW 226 (290)
Q Consensus 202 ~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (290)
+.++|.+..++|+|||+|+.++-..
T Consensus 263 Q~~iL~~a~~~lkpGG~LVYsTCSl 287 (359)
T 4fzv_A 263 QVQLLAAGLLATKPGGHVVYSTCSL 287 (359)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred HHHHHHHHHhcCCCCcEEEEEeCCC
Confidence 4689999999999999999976543
No 279
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.21 E-value=1.4e-06 Score=89.04 Aligned_cols=105 Identities=12% Similarity=0.066 Sum_probs=71.8
Q ss_pred CCcEEEecCCCChhhHHH--HhH-cC----------CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhh
Q 047406 63 GKDCLDIGCNSGIITIQI--AQK-FN----------CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIE 129 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~l--a~~-~~----------~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (290)
+..|||||||+|.+.... |.. .+ ..+|+++|.|+.++..++....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~---------------------- 467 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV---------------------- 467 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH----------------------
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh----------------------
Confidence 458999999999996432 221 11 2489999999988765554322
Q ss_pred ccCCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCC-----CCceeEEEEchhhhhhhhcCCchHHHH
Q 047406 130 KGDGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSP-----EKYYDAILCLSVTKWIHLNWGDDGLIT 204 (290)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~-----~~~fD~I~~~~vl~~~~l~~~~~~~~~ 204 (290)
+++.+.|.++.+|..+- ..| .++.|+|+|- |+......+....
T Consensus 468 ---------------------------Ng~~d~VtVI~gd~eev-~lp~~~~~~ekVDIIVSE----lmGsfl~nEL~pe 515 (745)
T 3ua3_A 468 ---------------------------RTWKRRVTIIESDMRSL-PGIAKDRGFEQPDIIVSE----LLGSFGDNELSPE 515 (745)
T ss_dssp ---------------------------HTTTTCSEEEESCGGGH-HHHHHHTTCCCCSEEEEC----CCBTTBGGGSHHH
T ss_pred ---------------------------cCCCCeEEEEeCchhhc-ccccccCCCCcccEEEEe----ccccccchhccHH
Confidence 34556799999998772 222 4789999983 2222222345567
Q ss_pred HHHHHHhhcCCCcEEEE
Q 047406 205 LFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 205 ~l~~~~~~LkpgG~l~i 221 (290)
+|..+.+.|+|||+++=
T Consensus 516 ~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 516 CLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHHTTGGGSCTTCEEES
T ss_pred HHHHHHHhCCCCcEEEC
Confidence 88888899999998653
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.11 E-value=3.4e-06 Score=77.20 Aligned_cols=37 Identities=16% Similarity=0.246 Sum_probs=31.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDS 96 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~ 96 (290)
+.++.+|||||||+|.++..+++..+..+++|+|++-
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGv 108 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGR 108 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEec
Confidence 4677899999999999999888766666889999864
No 281
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.10 E-value=5.8e-06 Score=75.64 Aligned_cols=45 Identities=13% Similarity=0.282 Sum_probs=39.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCC--ceEEEEeCCHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNC--RSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~--~~i~g~Dis~~~l~~a~~~ 105 (290)
.++.+|||||||+|.++..+++.... .+|+|+|+|+.+++.++.+
T Consensus 41 ~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~ 87 (279)
T 3uzu_A 41 ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQR 87 (279)
T ss_dssp CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHH
T ss_pred CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHh
Confidence 57889999999999999999987542 2399999999999999875
No 282
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.07 E-value=1.2e-05 Score=72.22 Aligned_cols=43 Identities=21% Similarity=0.340 Sum_probs=38.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.++.
T Consensus 30 ~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~ 72 (249)
T 3ftd_A 30 EEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKS 72 (249)
T ss_dssp CTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTT
T ss_pred CCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHh
Confidence 46789999999999999999886 44699999999999998866
No 283
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.07 E-value=5.1e-06 Score=75.31 Aligned_cols=87 Identities=8% Similarity=-0.069 Sum_probs=62.4
Q ss_pred cCC--CcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhh
Q 047406 61 FEG--KDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNV 138 (290)
Q Consensus 61 ~~~--~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (290)
.++ .+|||+|||+|..++.+|.. + .+|+++|+++.+.+.++.++...... +
T Consensus 85 ~~g~~~~VLDl~~G~G~dal~lA~~-g-~~V~~vE~~~~~~~l~~~~l~~a~~~---------------------~---- 137 (258)
T 2oyr_A 85 KGDYLPDVVDATAGLGRDAFVLASV-G-CRVRMLERNPVVAALLDDGLARGYAD---------------------A---- 137 (258)
T ss_dssp BTTBCCCEEETTCTTCHHHHHHHHH-T-CCEEEEECCHHHHHHHHHHHHHHHHC---------------------T----
T ss_pred cCCCCCEEEEcCCcCCHHHHHHHHc-C-CEEEEEECCHHHHHHHHHHHHHHHhh---------------------H----
Confidence 456 89999999999999999987 3 48999999999988888877652100 0
Q ss_pred hhHHHHHHhhhcCCCccccC-cCcceeEeecccccCCCCCCCceeEEEEchhh
Q 047406 139 TAAQEEKKAISRNCSPAERN-LFDIVSFKQENFVHGRDSPEKYYDAILCLSVT 190 (290)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl 190 (290)
..++ +..++.+...|..+.++...+.||+|++....
T Consensus 138 ----------------~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y 174 (258)
T 2oyr_A 138 ----------------EIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMF 174 (258)
T ss_dssp ----------------TTHHHHHHHEEEEESCHHHHSTTCSSCCSEEEECCCC
T ss_pred ----------------hhhhhhhcCEEEEECCHHHHHHhCcccCCEEEEcCCC
Confidence 0011 22358899999876433333479999986554
No 284
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=97.95 E-value=2.2e-05 Score=74.40 Aligned_cols=57 Identities=19% Similarity=0.187 Sum_probs=42.0
Q ss_pred eecccccCCCCCCCceeEEEEchhhhhhhhcC-C--------------------------chHHHHHHHHHHhhcCCCcE
Q 047406 166 KQENFVHGRDSPEKYYDAILCLSVTKWIHLNW-G--------------------------DDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 166 ~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~-~--------------------------~~~~~~~l~~~~~~LkpgG~ 218 (290)
..+.|.. ...|.+++|+|+|+..+||+.-.- + ..++..+|+..++.|+|||.
T Consensus 126 vpgSFy~-rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~ 204 (359)
T 1m6e_X 126 VPGSFYG-RLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGR 204 (359)
T ss_dssp EESCSSS-CCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCE
T ss_pred cchhhhh-ccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCce
Confidence 3444544 356789999999999999974210 0 12456778999999999999
Q ss_pred EEEee
Q 047406 219 FVLEP 223 (290)
Q Consensus 219 l~i~~ 223 (290)
++++.
T Consensus 205 mvl~~ 209 (359)
T 1m6e_X 205 MVLTI 209 (359)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99954
No 285
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.87 E-value=4.3e-05 Score=70.17 Aligned_cols=106 Identities=12% Similarity=0.125 Sum_probs=74.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHc-----CCceEEEEeCCHH--------------------------HHHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKF-----NCRSILGIDIDSN--------------------------RVADAYWHLRKIV 110 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~-----~~~~i~g~Dis~~--------------------------~l~~a~~~~~~~~ 110 (290)
...+|||+||..|.-++.++... +..+|+++|..+. .++.++.++..
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~-- 183 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN-- 183 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH--
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH--
Confidence 35699999999999888887654 2568999996421 23344444433
Q ss_pred HhhhhhhhhhhhchhhhhhccCCcchhhhhHHHHHHhhhcCCCccccCc-CcceeEeecccccCCCCC-CCceeEEEEch
Q 047406 111 RTEHNEKRRANASRVEVIEKGDGLEKNVTAAQEEKKAISRNCSPAERNL-FDIVSFKQENFVHGRDSP-EKYYDAILCLS 188 (290)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~d~~~~~~~~-~~~fD~I~~~~ 188 (290)
.++ .+++.+..+++.+.++.. .++||+|+.-.
T Consensus 184 ----------------------------------------------~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDa 217 (282)
T 2wk1_A 184 ----------------------------------------------YDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDG 217 (282)
T ss_dssp ----------------------------------------------TTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECC
T ss_pred ----------------------------------------------cCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcC
Confidence 334 257999999998755543 46899999532
Q ss_pred hhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEEee
Q 047406 189 VTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 189 vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (290)
.. + +.....|..++..|+|||++++..
T Consensus 218 D~-y-------~~~~~~Le~~~p~L~pGGiIv~DD 244 (282)
T 2wk1_A 218 DL-Y-------ESTWDTLTNLYPKVSVGGYVIVDD 244 (282)
T ss_dssp CS-H-------HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred Cc-c-------ccHHHHHHHHHhhcCCCEEEEEcC
Confidence 21 0 234578999999999999999954
No 286
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.86 E-value=0.00026 Score=70.16 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=39.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC-------------CceEEEEeCCHHHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN-------------CRSILGIDIDSNRVADAYWHLRKI 109 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~-------------~~~i~g~Dis~~~l~~a~~~~~~~ 109 (290)
.++.+|+|.+||+|.+.+....+.. ..+++|+|+++.+...|+.++..+
T Consensus 216 ~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lh 277 (530)
T 3ufb_A 216 QLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLH 277 (530)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHH
T ss_pred CCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhc
Confidence 4578999999999999877654321 236999999999999999987764
No 287
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.79 E-value=1.8e-05 Score=71.26 Aligned_cols=44 Identities=18% Similarity=0.162 Sum_probs=35.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++.+|||||||+|.++. ++. .+..+|+++|+|+.+++.++.++
T Consensus 20 ~~~~~VLEIG~G~G~lt~-l~~-~~~~~v~avEid~~~~~~a~~~~ 63 (252)
T 1qyr_A 20 QKGQAMVEIGPGLAALTE-PVG-ERLDQLTVIELDRDLAARLQTHP 63 (252)
T ss_dssp CTTCCEEEECCTTTTTHH-HHH-TTCSCEEEECCCHHHHHHHHTCT
T ss_pred CCcCEEEEECCCCcHHHH-hhh-CCCCeEEEEECCHHHHHHHHHHh
Confidence 577899999999999999 653 32123999999999999988743
No 288
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.76 E-value=8.8e-06 Score=74.62 Aligned_cols=38 Identities=16% Similarity=0.244 Sum_probs=32.7
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSN 97 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~ 97 (290)
+.++.+|||||||+|.++...++..+..+|.|+|++.+
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d 125 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQ 125 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCT
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccC
Confidence 46788999999999999998887777778999999753
No 289
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.72 E-value=3.2e-05 Score=64.75 Aligned_cols=43 Identities=12% Similarity=0.110 Sum_probs=34.2
Q ss_pred HhhhhccCCCcEEEecCCCC-hhhHHHHhHcCCceEEEEeCCHHH
Q 047406 55 VLKKEWFEGKDCLDIGCNSG-IITIQIAQKFNCRSILGIDIDSNR 98 (290)
Q Consensus 55 ~l~~~~~~~~~vLDiGcG~G-~~~~~la~~~~~~~i~g~Dis~~~ 98 (290)
.+.+...++.+|||||||+| .++..|+... ...|+++|+++.+
T Consensus 28 YI~~~~~~~~rVlEVG~G~g~~vA~~La~~~-g~~V~atDInp~A 71 (153)
T 2k4m_A 28 YIIRCSGPGTRVVEVGAGRFLYVSDYIRKHS-KVDLVLTDIKPSH 71 (153)
T ss_dssp HHHHHSCSSSEEEEETCTTCCHHHHHHHHHS-CCEEEEECSSCSS
T ss_pred HHHhcCCCCCcEEEEccCCChHHHHHHHHhC-CCeEEEEECCccc
Confidence 35566667789999999999 6999988743 4589999998743
No 290
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.62 E-value=7.6e-05 Score=71.24 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=76.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
.+.++||-||.|.|..+..+.+. +..+|+.+||++.+++.|++.+..... ..+
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~--------~~~------------------ 256 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCG--------DVL------------------ 256 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC------------CC------------------
T ss_pred CCCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhh--------hhh------------------
Confidence 35689999999999999998875 456899999999999999986432100 000
Q ss_pred HHHHHHhhhcCCCccccCcCcceeEeecccccCCC---CCCCceeEEEEchhhhhhhh--cCCchH--HHHHHHHHHhhc
Q 047406 141 AQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD---SPEKYYDAILCLSVTKWIHL--NWGDDG--LITLFMRIWKLL 213 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~fD~I~~~~vl~~~~l--~~~~~~--~~~~l~~~~~~L 213 (290)
...-..++.+...|....+. ...+.||+|+.-..-....- ...... ...++..+.+.|
T Consensus 257 ---------------d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L 321 (381)
T 3c6k_A 257 ---------------DNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVL 321 (381)
T ss_dssp ---------------SSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTE
T ss_pred ---------------ccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhc
Confidence 00011246777777654221 12367999997311000000 000011 157889999999
Q ss_pred CCCcEEEEee
Q 047406 214 RPGGIFVLEP 223 (290)
Q Consensus 214 kpgG~l~i~~ 223 (290)
+|||+++.+.
T Consensus 322 ~p~GVlv~Q~ 331 (381)
T 3c6k_A 322 KQDGKYFTQG 331 (381)
T ss_dssp EEEEEEEEEE
T ss_pred CCCCEEEEec
Confidence 9999999854
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.44 E-value=0.00047 Score=65.64 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=30.8
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDS 96 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~ 96 (290)
+.+|++|||+||++|.++..++++ ...|+|+|+.+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~ 243 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGP 243 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSC
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhh
Confidence 468999999999999999999887 45899999864
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.44 E-value=8.4e-05 Score=68.63 Aligned_cols=39 Identities=21% Similarity=0.218 Sum_probs=33.0
Q ss_pred hhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCH
Q 047406 58 KEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDS 96 (290)
Q Consensus 58 ~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~ 96 (290)
..+.++.+|||+||++|.++..+++..+..+|.|+|+..
T Consensus 77 ~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~ 115 (300)
T 3eld_A 77 GYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGI 115 (300)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCC
T ss_pred CCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecc
Confidence 345688999999999999999988766666899999964
No 293
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.42 E-value=0.00042 Score=62.88 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=27.2
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCC
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDID 95 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis 95 (290)
.+.++.+|+|+||++|.++...++..+...|.|.++.
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig 106 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKG 106 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEc
Confidence 4578999999999999999998775222244555553
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.31 E-value=0.00041 Score=63.28 Aligned_cols=46 Identities=24% Similarity=0.245 Sum_probs=40.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.++.+|||++||+|..++.+++. +.+++|+|+++.+++.|+.++..
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHH
Confidence 57899999999999999986664 46999999999999999998865
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.27 E-value=0.001 Score=59.80 Aligned_cols=37 Identities=16% Similarity=0.223 Sum_probs=32.5
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDS 96 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~ 96 (290)
+.++.+|+|+||++|.++...+...+..+|+|+|+..
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~ 112 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGG 112 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCS
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCC
Confidence 4688899999999999999888877777899999954
No 296
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.12 E-value=0.00066 Score=62.35 Aligned_cols=42 Identities=21% Similarity=0.181 Sum_probs=38.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.++..++|.+||.|.++..+++. ..+|+|+|.|+.+++.|+.
T Consensus 21 ~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~ 62 (285)
T 1wg8_A 21 RPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG 62 (285)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh
Confidence 47889999999999999999987 4599999999999999887
No 297
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.09 E-value=0.002 Score=59.56 Aligned_cols=38 Identities=16% Similarity=0.207 Sum_probs=32.6
Q ss_pred hccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCH
Q 047406 59 EWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDS 96 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~ 96 (290)
.+.++.+||||||++|.++...+...+...|+|+|+..
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~ 128 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGG 128 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCS
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCC
Confidence 34678899999999999999888877777899999954
No 298
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.48 E-value=0.0055 Score=54.61 Aligned_cols=47 Identities=23% Similarity=0.255 Sum_probs=40.4
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
..+|..|||..||+|..++..++. +.+++|+|+++.+++.|+.++..
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHHHHHHh
Confidence 368899999999999998886554 56999999999999999998764
No 299
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.16 E-value=0.0027 Score=58.21 Aligned_cols=108 Identities=10% Similarity=0.026 Sum_probs=75.8
Q ss_pred hhHHhhhhccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhcc
Q 047406 52 RFKVLKKEWFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKG 131 (290)
Q Consensus 52 ~l~~l~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (290)
.++.+.. ..+..+||+-+|||.+++.... +..+++.+|.++..++..++|+..
T Consensus 83 yf~~l~~--~n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~----------------------- 135 (283)
T 2oo3_A 83 YISVIKQ--INLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHF----------------------- 135 (283)
T ss_dssp HHHHHHH--HSSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCT-----------------------
T ss_pred HHHHHHH--hcCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCc-----------------------
Confidence 3444444 3567899999999999999766 346999999999998887775421
Q ss_pred CCcchhhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCC---CCCCceeEEEEchhhhhhhhcCC-chHHHHHHH
Q 047406 132 DGLEKNVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRD---SPEKYYDAILCLSVTKWIHLNWG-DDGLITLFM 207 (290)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~---~~~~~fD~I~~~~vl~~~~l~~~-~~~~~~~l~ 207 (290)
.+++.+...|....+. .+..+||+|++- -.++ +....+++.
T Consensus 136 ----------------------------~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiD-------PPYe~k~~~~~vl~ 180 (283)
T 2oo3_A 136 ----------------------------NKKVYVNHTDGVSKLNALLPPPEKRGLIFID-------PSYERKEEYKEIPY 180 (283)
T ss_dssp ----------------------------TSCEEEECSCHHHHHHHHCSCTTSCEEEEEC-------CCCCSTTHHHHHHH
T ss_pred ----------------------------CCcEEEEeCcHHHHHHHhcCCCCCccEEEEC-------CCCCCCcHHHHHHH
Confidence 2357788888544221 234579999963 3344 346677777
Q ss_pred HHHh--hcCCCcEEEE
Q 047406 208 RIWK--LLRPGGIFVL 221 (290)
Q Consensus 208 ~~~~--~LkpgG~l~i 221 (290)
.+.+ .+.|+|++++
T Consensus 181 ~L~~~~~r~~~Gi~v~ 196 (283)
T 2oo3_A 181 AIKNAYSKFSTGLYCV 196 (283)
T ss_dssp HHHHHHHHCTTSEEEE
T ss_pred HHHHhCccCCCeEEEE
Confidence 7765 4679999999
No 300
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.10 E-value=0.017 Score=54.39 Aligned_cols=65 Identities=15% Similarity=0.051 Sum_probs=46.3
Q ss_pred ccccCCCCCchhh-HHhhhh--cc------CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHH
Q 047406 41 YRIGQGLNEDPRF-KVLKKE--WF------EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 41 ~~~~~~~~~~~~l-~~l~~~--~~------~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~ 105 (290)
..++|+...++.+ +.|... +. ++.+|||||+|.|.+|..|+....+.+++++|+++..+...+..
T Consensus 28 k~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~ 101 (353)
T 1i4w_A 28 FFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAK 101 (353)
T ss_dssp CGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHH
T ss_pred CCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHh
Confidence 3455666666543 323222 22 35889999999999999999865456899999999988776653
No 301
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.09 E-value=0.0052 Score=57.18 Aligned_cols=45 Identities=18% Similarity=0.223 Sum_probs=37.9
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+...|+++|.+++.++.++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 46789999999886 7888888888766579999999998888764
No 302
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.04 E-value=0.002 Score=74.23 Aligned_cols=104 Identities=13% Similarity=0.112 Sum_probs=51.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC-----CceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcch
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN-----CRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEK 136 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~-----~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (290)
+..+|||||.|+|..+..+..... ..+++.+|+|+...+.|+..+...
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--------------------------- 1292 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--------------------------- 1292 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH---------------------------
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc---------------------------
Confidence 567999999999987665554432 237889999987666665543220
Q ss_pred hhhhHHHHHHhhhcCCCccccCcCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 137 NVTAAQEEKKAISRNCSPAERNLFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
++.....|..+.-+.....||+|++.+++|- ..++...+.++.++|+||
T Consensus 1293 -------------------------di~~~~~d~~~~~~~~~~~ydlvia~~vl~~------t~~~~~~l~~~~~lL~p~ 1341 (2512)
T 2vz8_A 1293 -------------------------HVTQGQWDPANPAPGSLGKADLLVCNCALAT------LGDPAVAVGNMAATLKEG 1341 (2512)
T ss_dssp -------------------------TEEEECCCSSCCCC-----CCEEEEECC--------------------------C
T ss_pred -------------------------ccccccccccccccCCCCceeEEEEcccccc------cccHHHHHHHHHHhcCCC
Confidence 1222222221100113467999999999851 246778899999999999
Q ss_pred cEEEEee
Q 047406 217 GIFVLEP 223 (290)
Q Consensus 217 G~l~i~~ 223 (290)
|.+++..
T Consensus 1342 G~l~~~e 1348 (2512)
T 2vz8_A 1342 GFLLLHT 1348 (2512)
T ss_dssp CEEEEEE
T ss_pred cEEEEEe
Confidence 9998854
No 303
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.01 E-value=0.0052 Score=56.40 Aligned_cols=44 Identities=20% Similarity=0.256 Sum_probs=37.4
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-.|+|. |..++++|+..+. +|+++|.+++.++.++.
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 208 (340)
T 3s2e_A 164 TRPGQWVVISGIGGLGHVAVQYARAMGL-RVAAVDIDDAKLNLARR 208 (340)
T ss_dssp CCTTSEEEEECCSTTHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHH
Confidence 46889999999976 7888899988765 99999999998887765
No 304
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.01 E-value=0.014 Score=54.09 Aligned_cols=57 Identities=18% Similarity=0.065 Sum_probs=34.3
Q ss_pred eEeecccccCCCCCCCceeEEEEch---hhhhhhhcC--CchHHHHHHHHHHhhcCCCcEEEEe
Q 047406 164 SFKQENFVHGRDSPEKYYDAILCLS---VTKWIHLNW--GDDGLITLFMRIWKLLRPGGIFVLE 222 (290)
Q Consensus 164 ~~~~~d~~~~~~~~~~~fD~I~~~~---vl~~~~l~~--~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (290)
.++++|+... ...++||+|+|-. ..-....+- ...-.+..+.-+.+.|+|||.|++-
T Consensus 155 ~~IqGD~~~~--~~~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK 216 (344)
T 3r24_A 155 STLIGDCATV--HTANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK 216 (344)
T ss_dssp EEEESCGGGE--EESSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEcccccc--ccCCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE
Confidence 4588887542 1247899999931 110000000 0113467777788899999999994
No 305
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.79 E-value=0.011 Score=55.26 Aligned_cols=46 Identities=15% Similarity=0.139 Sum_probs=38.4
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+|. |..++++|+..+...|+++|.++..++.++.
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 225 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEE 225 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 346889999999875 7788888888776689999999998887765
No 306
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.61 E-value=0.048 Score=50.48 Aligned_cols=79 Identities=13% Similarity=0.069 Sum_probs=53.1
Q ss_pred eeEeecccccCCCC-CCCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhh
Q 047406 163 VSFKQENFVHGRDS-PEKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETT 239 (290)
Q Consensus 163 i~~~~~d~~~~~~~-~~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~ 239 (290)
+.+..+|..+.++. ....+|+|+--.-. -. ..+++ ..+|.++.++++|||+|+-
T Consensus 168 L~l~~GDa~~~l~~l~~~~~Da~flDgFs----P~-kNPeLWs~e~f~~l~~~~~pgg~laT------------------ 224 (308)
T 3vyw_A 168 LKVLLGDARKRIKEVENFKADAVFHDAFS----PY-KNPELWTLDFLSLIKERIDEKGYWVS------------------ 224 (308)
T ss_dssp EEEEESCHHHHGGGCCSCCEEEEEECCSC----TT-TSGGGGSHHHHHHHHTTEEEEEEEEE------------------
T ss_pred EEEEechHHHHHhhhcccceeEEEeCCCC----cc-cCcccCCHHHHHHHHHHhCCCcEEEE------------------
Confidence 56677776664433 23479999962111 00 01122 6899999999999999987
Q ss_pred hccccccccCchhHHHHHHHHcCCeeeEeccCC
Q 047406 240 ATNFQNIKLYPKEFQEILLDKIGFRTVEDIGSG 272 (290)
Q Consensus 240 ~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~~~~ 272 (290)
+.....++..|..+||++.+.-+-|
T Consensus 225 --------Ytaag~VRR~L~~aGF~V~k~~G~g 249 (308)
T 3vyw_A 225 --------YSSSLSVRKSLLTLGFKVGSSREIG 249 (308)
T ss_dssp --------SCCCHHHHHHHHHTTCEEEEEECC-
T ss_pred --------EeCcHHHHHHHHHCCCEEEecCCCC
Confidence 4445566668999999998887653
No 307
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.52 E-value=0.013 Score=54.27 Aligned_cols=45 Identities=20% Similarity=0.352 Sum_probs=37.5
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+.++..+|+++|.+++.++.++.
T Consensus 169 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 169 VTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 46889999999875 7788888887765589999999988887764
No 308
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=95.42 E-value=0.011 Score=54.40 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=37.5
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.+++
T Consensus 164 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 209 (352)
T 3fpc_A 164 IKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALE 209 (352)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHH
Confidence 46889999999876 7788888887765589999999988887765
No 309
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.35 E-value=0.41 Score=44.37 Aligned_cols=124 Identities=12% Similarity=0.110 Sum_probs=77.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
+...|+.+|||.......+....+...++-+|. |++++.-++.+......... +. ......
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~------l~------~~~~~~------ 157 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRIS------LG------LSKEDT------ 157 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHH------HT------CCSSCC------
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhh------cc------cccccc------
Confidence 457899999999999888877656667888888 88888877766542100000 00 000000
Q ss_pred HHHHHhhhcCCCccccC-cCcceeEeecccccC-C------CC-CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhh
Q 047406 142 QEEKKAISRNCSPAERN-LFDIVSFKQENFVHG-R------DS-PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKL 212 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~-~------~~-~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~ 212 (290)
.. .... ...+..++..|+.+. + .. ......++++-.++.|+. .+....++..+...
T Consensus 158 ---------~~--~~~~~~~~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~----~~~~~~ll~~ia~~ 222 (334)
T 1rjd_A 158 ---------AK--SPFLIDQGRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMH----NNESQLLINTIMSK 222 (334)
T ss_dssp ---------CC--TTEEEECSSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSC----HHHHHHHHHHHHHH
T ss_pred ---------cc--cccccCCCceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCC----HHHHHHHHHHHHhh
Confidence 00 0000 124566777777651 1 11 235689999999997664 57888999999988
Q ss_pred cCCCcEEE
Q 047406 213 LRPGGIFV 220 (290)
Q Consensus 213 LkpgG~l~ 220 (290)
. |+|.++
T Consensus 223 ~-~~~~~v 229 (334)
T 1rjd_A 223 F-SHGLWI 229 (334)
T ss_dssp C-SSEEEE
T ss_pred C-CCcEEE
Confidence 7 667664
No 310
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=95.11 E-value=0.2 Score=46.32 Aligned_cols=44 Identities=9% Similarity=0.090 Sum_probs=36.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.+.+++|+.||.|.++..+.+. +...++++|+++.+++..+.+.
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~a-G~~~v~~~e~d~~a~~t~~~N~ 53 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESC-GAECVYSNEWDKYAQEVYEMNF 53 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHT-TCEEEEEECCCHHHHHHHHHHH
T ss_pred CCCcEEEECCCcCHHHHHHHHC-CCeEEEEEeCCHHHHHHHHHHc
Confidence 4579999999999999887664 3446789999999998887764
No 311
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.98 E-value=0.11 Score=48.30 Aligned_cols=44 Identities=9% Similarity=0.133 Sum_probs=35.7
Q ss_pred CCcEEEecCCCChhhHHHHhHcC-CceEEEEeCCHHHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFN-CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~-~~~i~g~Dis~~~l~~a~~~~ 106 (290)
..+++|+.||.|.++..+.+... ...++++|+++.+++..+.|+
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~ 46 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF 46 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc
Confidence 35899999999999998877531 236899999999999888764
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.94 E-value=0.015 Score=54.58 Aligned_cols=45 Identities=13% Similarity=0.037 Sum_probs=37.9
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||.+|||. |..++++|+.++..+|+++|.+++.++.++.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 46889999999986 8888899988776589999999988877754
No 313
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=94.87 E-value=0.047 Score=51.39 Aligned_cols=45 Identities=13% Similarity=0.137 Sum_probs=37.7
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+...|+++|.++..++.+++
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 256 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE 256 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 56789999999875 6788888888776689999999999888765
No 314
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=94.82 E-value=0.022 Score=52.27 Aligned_cols=46 Identities=26% Similarity=0.375 Sum_probs=38.9
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.+++
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~ 214 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALARE 214 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 457889999999976 7888888888766799999999998888765
No 315
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=94.80 E-value=0.066 Score=49.35 Aligned_cols=46 Identities=26% Similarity=0.217 Sum_probs=38.6
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~ 105 (290)
+.+|.+||-+|+|. |..++++|+..+...|+++|.+++.++.+++.
T Consensus 177 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 177 VRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 46889999999876 78888888887765699999999998888763
No 316
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.70 E-value=0.09 Score=53.04 Aligned_cols=77 Identities=17% Similarity=0.139 Sum_probs=49.5
Q ss_pred ceeEeecccccCCCCC----CCceeEEEEchhhhhhhhcCCchH--HHHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhh
Q 047406 162 IVSFKQENFVHGRDSP----EKYYDAILCLSVTKWIHLNWGDDG--LITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRV 235 (290)
Q Consensus 162 ~i~~~~~d~~~~~~~~----~~~fD~I~~~~vl~~~~l~~~~~~--~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~ 235 (290)
.+++..+|..+.++.. ...+|.++.-.-.- .. .++ ...+|..+.++++|||.+...
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p--~~---np~~w~~~~~~~l~~~~~~g~~~~t~------------- 210 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP--AK---NPDMWNEQLFNAMARMTRPGGTFSTF------------- 210 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC-------CCTTCSHHHHHHHHHHEEEEEEEEES-------------
T ss_pred EEEEEccCHHHHHhhcccccCCceeEEEECCCCC--CC---ChhhhhHHHHHHHHHHhCCCCEEEec-------------
Confidence 4677778876644332 46899999622110 00 011 167889999999999988762
Q ss_pred hhhhhccccccccCchhHHHHHHHHcCCeeeEec
Q 047406 236 SETTATNFQNIKLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
......+..+.++||.+.+.-
T Consensus 211 -------------~~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 211 -------------TAAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -------------CCCHHHHHHHHHTTCEEEEEE
T ss_pred -------------cCcHHHHHHHHhCCeEEEecc
Confidence 223455668889999877654
No 317
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=94.64 E-value=0.033 Score=51.25 Aligned_cols=44 Identities=18% Similarity=0.261 Sum_probs=35.9
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+. +|+++|.+++.++.++.
T Consensus 166 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 166 VQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH
Confidence 46889999999875 6778888887665 69999999998887754
No 318
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=94.59 E-value=0.031 Score=52.03 Aligned_cols=45 Identities=27% Similarity=0.330 Sum_probs=37.5
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.+++
T Consensus 191 ~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 191 VEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 46789999999975 7888888888776689999999998887754
No 319
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=94.47 E-value=0.041 Score=51.06 Aligned_cols=45 Identities=18% Similarity=0.295 Sum_probs=37.0
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+...|+++|.+++.++.++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 189 VTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 46789999999875 7788888888766589999999988887754
No 320
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=94.41 E-value=0.074 Score=48.47 Aligned_cols=45 Identities=33% Similarity=0.459 Sum_probs=37.7
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
..+|.+||-.|+|. |..++++|+..+...++++|.+++.++.+++
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~ 203 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKS 203 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHH
Confidence 46889999999975 5678888888877788999999998888765
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.37 E-value=0.068 Score=49.61 Aligned_cols=43 Identities=16% Similarity=0.159 Sum_probs=34.9
Q ss_pred CCCcEEEec-CCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIG-CNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiG-cG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+|.+||-.| +|. |..++++|+.....+|+++|.+++.++.++.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 678999998 554 7888898887555699999999988887754
No 322
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=94.36 E-value=0.078 Score=48.35 Aligned_cols=45 Identities=20% Similarity=0.240 Sum_probs=36.1
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
..+|.+||-+|+|+ |..+.++++.....+|+++|.+++.++.++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~ 206 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKK 206 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhh
Confidence 46889999999986 4566666776667799999999988877765
No 323
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=94.32 E-value=0.058 Score=50.68 Aligned_cols=43 Identities=21% Similarity=0.115 Sum_probs=38.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHc-CCceEEEEeCCHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKF-NCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~ 103 (290)
.+|..++|..||.|..+..+++.. +..+|+|+|.++.+++.|+
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~ 99 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK 99 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 578999999999999999999875 4569999999999999884
No 324
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=94.26 E-value=0.9 Score=41.59 Aligned_cols=110 Identities=12% Similarity=0.012 Sum_probs=73.6
Q ss_pred CcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAAQE 143 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (290)
..|++||||-=.-...+.. .....++=+| .|.+++..++.+...+
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~--------------------------------- 148 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHG--------------------------------- 148 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTT---------------------------------
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcC---------------------------------
Confidence 5799999997665444331 1135889999 4999998888775411
Q ss_pred HHHhhhcCCCccccCcCcceeEeecccccCCC-------CCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCC
Q 047406 144 EKKAISRNCSPAERNLFDIVSFKQENFVHGRD-------SPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPG 216 (290)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~i~~~~~d~~~~~~-------~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~Lkpg 216 (290)
........++..|+.+.+. ......-++++-.+++|+. .+....++..+...+.||
T Consensus 149 -------------~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~----~~~~~~ll~~l~~~~~~g 211 (310)
T 2uyo_A 149 -------------VTPTADRREVPIDLRQDWPPALRSAGFDPSARTAWLAEGLLMYLP----ATAQDGLFTEIGGLSAVG 211 (310)
T ss_dssp -------------CCCSSEEEEEECCTTSCHHHHHHHTTCCTTSCEEEEECSCGGGSC----HHHHHHHHHHHHHTCCTT
T ss_pred -------------CCCCCCeEEEecchHhhHHHHHHhccCCCCCCEEEEEechHhhCC----HHHHHHHHHHHHHhCCCC
Confidence 0012235566666654210 1124567888888887663 567889999999999999
Q ss_pred cEEEEeeCC
Q 047406 217 GIFVLEPQP 225 (290)
Q Consensus 217 G~l~i~~~~ 225 (290)
+.++++..+
T Consensus 212 s~l~~d~~~ 220 (310)
T 2uyo_A 212 SRIAVETSP 220 (310)
T ss_dssp CEEEEECCC
T ss_pred eEEEEEecC
Confidence 999997643
No 325
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=94.17 E-value=0.058 Score=50.01 Aligned_cols=45 Identities=24% Similarity=0.407 Sum_probs=36.6
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.++.
T Consensus 189 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 189 VTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 46789999999875 6788888887765589999999988887754
No 326
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=94.16 E-value=0.32 Score=45.82 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=33.8
Q ss_pred CcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~ 105 (290)
.+++|+.||.|.++.-+.+. +...+.++|+++.+++..+.|
T Consensus 3 ~~vidLFsG~GGlslG~~~a-G~~~v~avE~d~~a~~t~~~N 43 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA-GFDVKMAVEIDQHAINTHAIN 43 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH-TCEEEEEECSCHHHHHHHHHH
T ss_pred CeEEEEccCcCHHHHHHHHC-CCcEEEEEeCCHHHHHHHHHh
Confidence 58999999999999887765 333577999999998877765
No 327
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.15 E-value=0.024 Score=52.90 Aligned_cols=45 Identities=16% Similarity=0.207 Sum_probs=36.6
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+|. |..++++|+..+. +|+++|.+++.++.++.
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga-~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGA-HVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 346889999999975 7788888887655 79999999988887764
No 328
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=94.12 E-value=0.023 Score=53.04 Aligned_cols=45 Identities=24% Similarity=0.332 Sum_probs=36.7
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 56789999999764 6788888887764699999999988887764
No 329
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.10 E-value=0.093 Score=49.95 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=41.8
Q ss_pred cCCCcEEEecCCCChhhHHHH-hHcCC-ceEEEEeCCHHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIA-QKFNC-RSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la-~~~~~-~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.++.+++|+|++.|..+..++ +..+. .+|+++|.+|...+..++++..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~ 274 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRR 274 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHh
Confidence 578999999999999999887 45543 6999999999999999998875
No 330
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=94.04 E-value=0.048 Score=50.62 Aligned_cols=45 Identities=16% Similarity=0.358 Sum_probs=36.7
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+...|+++|.+++.++.++.
T Consensus 190 ~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 190 VEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 46789999999875 6788888887765589999999988887764
No 331
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=94.00 E-value=0.053 Score=50.21 Aligned_cols=45 Identities=24% Similarity=0.366 Sum_probs=36.8
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+...|+++|.+++.++.++.
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 46789999999875 6788888887765589999999988887764
No 332
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=93.93 E-value=0.042 Score=50.36 Aligned_cols=45 Identities=18% Similarity=0.212 Sum_probs=35.6
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+|. |..++++++..+. +|+++|.+++.++.++.
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAMGL-NVVAVDIGDEKLELAKE 206 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHTTC-EEEEECSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 346889999999964 6677777777654 99999999988887754
No 333
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=93.90 E-value=0.043 Score=50.33 Aligned_cols=44 Identities=23% Similarity=0.259 Sum_probs=36.2
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHc--CCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKF--NCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~--~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+ +|.+||-+|+|. |..++++|+.. +. +|+++|.+++.++.++.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga-~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNI-TIVGISRSKKHRDFALE 214 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSCHHHHHHHHH
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCC-EEEEEeCCHHHHHHHHH
Confidence 45 899999999975 67888888877 54 79999999998887765
No 334
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=93.90 E-value=0.053 Score=50.36 Aligned_cols=45 Identities=22% Similarity=0.321 Sum_probs=36.8
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.++.
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 193 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 46789999999875 6788888888765589999999988887754
No 335
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=93.76 E-value=0.053 Score=49.76 Aligned_cols=45 Identities=13% Similarity=0.169 Sum_probs=37.2
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+|. |..++++|+..+. +|+++|.+++.++.++.
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKKQDALS 218 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSTTHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCC-eEEEEeCCHHHHHHHHh
Confidence 346889999999876 7788888887765 89999999988887755
No 336
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=93.70 E-value=0.071 Score=48.91 Aligned_cols=43 Identities=21% Similarity=0.238 Sum_probs=34.9
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.++.
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 789999999964 6777888887665489999999988877754
No 337
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=93.40 E-value=0.58 Score=42.03 Aligned_cols=56 Identities=9% Similarity=0.064 Sum_probs=40.9
Q ss_pred CcceeEeecccccCCCC-----CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEEee
Q 047406 160 FDIVSFKQENFVHGRDS-----PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 160 ~~~i~~~~~d~~~~~~~-----~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (290)
.+++.++.+++.+.++. +..++|+|+.-... | ......++.++..|+|||++++..
T Consensus 157 ~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~-Y-------~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 157 TQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL-Y-------EPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp CCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC-H-------HHHHHHHHHHGGGEEEEEEEEESS
T ss_pred CCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc-c-------chHHHHHHHHHHHhCCCcEEEEcC
Confidence 36799999999775432 44579999953322 0 334677889999999999999954
No 338
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=92.79 E-value=0.067 Score=49.51 Aligned_cols=44 Identities=14% Similarity=0.241 Sum_probs=36.6
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+. +|+++|.+++.++.++.
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKATGA-EVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEecCchhHHHHHH
Confidence 46889999999875 7788888887765 89999999988887755
No 339
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.75 E-value=0.074 Score=48.62 Aligned_cols=44 Identities=16% Similarity=0.259 Sum_probs=36.1
Q ss_pred ccCCCcEEEecCCC--ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS--GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~--G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|+ |..+.++++..+. +|+++|.+++.++.++.
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQILNF-RLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 46789999999974 6788888887765 89999999988877765
No 340
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=92.71 E-value=0.11 Score=43.45 Aligned_cols=43 Identities=14% Similarity=0.111 Sum_probs=30.9
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+.+|++||..|++ .|.....++...+ .+|+++|.+++.++.++
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G-~~V~~~~~~~~~~~~~~ 80 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMIG-ARIYTTAGSDAKREMLS 80 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHHT-CEEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHH
Confidence 4678999999953 3555666666554 48999999987766553
No 341
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=92.68 E-value=0.077 Score=48.30 Aligned_cols=42 Identities=21% Similarity=0.260 Sum_probs=34.0
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADA 102 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a 102 (290)
+.+|.+||-.|++ .|..+.++++..+. +|+++|.+++.++.+
T Consensus 147 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 147 PKNGETVVISGAAGAVGSVAGQIARLKGC-RVVGIAGGAEKCRFL 190 (336)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4688999999983 46777787877665 999999999887776
No 342
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=92.63 E-value=1 Score=40.68 Aligned_cols=41 Identities=10% Similarity=0.070 Sum_probs=31.9
Q ss_pred CcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~ 105 (290)
++|+|+-||.|.++.-+.+. +-.-+.++|+++.+++.-+.|
T Consensus 1 mkvidLFsG~GG~~~G~~~a-G~~~v~a~e~d~~a~~ty~~N 41 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKA-GFRIICANEYDKSIWKTYESN 41 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHT-TCEEEEEEECCTTTHHHHHHH
T ss_pred CeEEEeCcCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHH
Confidence 47999999999988876554 333567999999888776664
No 343
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=92.55 E-value=0.14 Score=47.22 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=38.8
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCH---HHHHHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDS---NRVADAYWHLRKI 109 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~---~~l~~a~~~~~~~ 109 (290)
-.+|..|||.-||+|..+....+. +.+.+|+|+++ ..++.++.++...
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCccHHHHHHHHHHHHHHc
Confidence 368899999999999998875554 57899999999 9999998887653
No 344
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=92.41 E-value=0.41 Score=47.99 Aligned_cols=76 Identities=17% Similarity=0.185 Sum_probs=47.5
Q ss_pred eeEeecccccCCCCC----CCceeEEEEchhhhhhhhcCCchHH--HHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhhh
Q 047406 163 VSFKQENFVHGRDSP----EKYYDAILCLSVTKWIHLNWGDDGL--ITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRVS 236 (290)
Q Consensus 163 i~~~~~d~~~~~~~~----~~~fD~I~~~~vl~~~~l~~~~~~~--~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~ 236 (290)
+++..+|..+.++.. ...||+++.-.-.. .. .+++ ..+|.++.++++|||.+....
T Consensus 158 l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p--~~---np~~w~~~~~~~l~~~~~~g~~~~t~~------------- 219 (676)
T 3ps9_A 158 LDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP--AK---NPDMWTQNLFNAMARLARPGGTLATFT------------- 219 (676)
T ss_dssp EEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG--GG---CGGGSCHHHHHHHHHHEEEEEEEEESC-------------
T ss_pred EEEecCCHHHHHHhcccccCCcccEEEECCCCC--cC---ChhhhhHHHHHHHHHHhCCCCEEEecc-------------
Confidence 556667765533321 36799999622110 00 0121 578999999999999988731
Q ss_pred hhhhccccccccCchhHHHHHHHHcCCeeeEec
Q 047406 237 ETTATNFQNIKLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
.....+..+.++||.+.+.-
T Consensus 220 -------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 -------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp -------------CCHHHHHHHHHHTCEEEEEE
T ss_pred -------------CcHHHHHHHHhCCeEEEecc
Confidence 22345557889999877654
No 345
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=92.24 E-value=0.098 Score=48.20 Aligned_cols=45 Identities=9% Similarity=0.093 Sum_probs=34.2
Q ss_pred ccCC------CcEEEecCCC-Chhh-HHHH-hHcCCceEEEEeCCHH---HHHHHHH
Q 047406 60 WFEG------KDCLDIGCNS-GIIT-IQIA-QKFNCRSILGIDIDSN---RVADAYW 104 (290)
Q Consensus 60 ~~~~------~~vLDiGcG~-G~~~-~~la-~~~~~~~i~g~Dis~~---~l~~a~~ 104 (290)
+.+| .+||-+|+|. |..+ +++| +..+..+|+++|.+++ .++.++.
T Consensus 164 ~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~~ 220 (357)
T 2b5w_A 164 ASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIEE 220 (357)
T ss_dssp HTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHHH
T ss_pred CCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHHH
Confidence 4678 9999999854 6677 7778 7665545999999887 7777654
No 346
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.08 E-value=0.21 Score=45.86 Aligned_cols=47 Identities=13% Similarity=0.089 Sum_probs=39.3
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
-.+|..|||.-||+|..+....+ . +.+.+|+|+++..++.++.++..
T Consensus 250 ~~~~~~VlDpF~GsGtt~~aa~~-~-gr~~ig~e~~~~~~~~~~~r~~~ 296 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLVAER-E-SRKWISFEMKPEYVAASAFRFLD 296 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHH-T-TCEEEEEESCHHHHHHHHGGGSC
T ss_pred CCCCCEEEECCCCCCHHHHHHHH-c-CCCEEEEeCCHHHHHHHHHHHHh
Confidence 36889999999999998887444 3 57999999999999999887654
No 347
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.61 E-value=0.18 Score=45.43 Aligned_cols=43 Identities=14% Similarity=0.037 Sum_probs=35.8
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+..+. +|++++ +++.++.+++
T Consensus 140 ~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 140 LTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAK 183 (315)
T ss_dssp CCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHH
Confidence 46889999999964 7888888888776 999999 9888887755
No 348
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=91.55 E-value=0.17 Score=45.94 Aligned_cols=42 Identities=21% Similarity=0.261 Sum_probs=32.3
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADA 102 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a 102 (290)
+.++.+||-.|++ .|..+..++...+. +|+++|.+++.++.+
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~-~V~~~~~~~~~~~~~ 186 (333)
T 1v3u_A 143 VKGGETVLVSAAAGAVGSVVGQIAKLKGC-KVVGAAGSDEKIAYL 186 (333)
T ss_dssp CCSSCEEEEESTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHH
T ss_pred CCCCCEEEEecCCCcHHHHHHHHHHHCCC-EEEEEeCCHHHHHHH
Confidence 4678999999983 45666666666554 899999999887766
No 349
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=91.43 E-value=0.38 Score=43.36 Aligned_cols=64 Identities=16% Similarity=0.171 Sum_probs=41.5
Q ss_pred ceeEeecccccCCC-CCCCceeEEEEchhhh----hhhhc--------C--CchHHHHHHHHHHhhcCCCcEEEEeeCC
Q 047406 162 IVSFKQENFVHGRD-SPEKYYDAILCLSVTK----WIHLN--------W--GDDGLITLFMRIWKLLRPGGIFVLEPQP 225 (290)
Q Consensus 162 ~i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~----~~~l~--------~--~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 225 (290)
.+.+.++|..+.+. .++++||+|++..-.. +.... + ....+..++.++.++|+|||.+++..+.
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~d 99 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVGD 99 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEECC
Confidence 57889999877322 3457899999953210 00000 0 0012457888999999999999998763
No 350
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.41 E-value=0.083 Score=48.42 Aligned_cols=46 Identities=26% Similarity=0.406 Sum_probs=34.8
Q ss_pred hccCCCcEEEecCCC--ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS--GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~--G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.++.+||-.|+|+ |..+.++++..+..+|+++|.+++.++.++.
T Consensus 167 ~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 167 SLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 346889999999984 4567777777623489999999988877643
No 351
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=91.28 E-value=0.18 Score=46.14 Aligned_cols=42 Identities=26% Similarity=0.344 Sum_probs=33.9
Q ss_pred CCCcEEEe-cCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDI-GCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDi-GcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+|.+||-. |+|. |..++++|+..+. +|+++|.+++.++.++.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 193 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGL-RVITTASRNETIEWTKK 193 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEECCSHHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 78999999 4553 6788888887665 99999999988887765
No 352
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=91.27 E-value=0.18 Score=45.76 Aligned_cols=44 Identities=14% Similarity=0.099 Sum_probs=34.5
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-.|++ .|..+.++++..+. +|+++|.+++.++.++.
T Consensus 146 ~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 191 (334)
T 3qwb_A 146 VKKGDYVLLFAAAGGVGLILNQLLKMKGA-HTIAVASTDEKLKIAKE 191 (334)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 4678999999943 46777888887654 89999999988877654
No 353
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=91.20 E-value=0.089 Score=47.18 Aligned_cols=44 Identities=16% Similarity=0.173 Sum_probs=35.0
Q ss_pred ccCCCcEEEecC--CCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGC--NSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+ |.|..++++++..+. +|+++|.+++.++.++.
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 168 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAMGL-RVLAAASRPEKLALPLA 168 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHTTC-EEEEEESSGGGSHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh
Confidence 568899999998 346778888887665 89999999887776643
No 354
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.18 E-value=0.14 Score=46.40 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=35.0
Q ss_pred ccCCCcEEEec-CC-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIG-CN-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiG-cG-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-.| +| .|..+.++++..+. +|+++|.+++.++.++.
T Consensus 138 ~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 183 (325)
T 3jyn_A 138 VKPGEIILFHAAAGGVGSLACQWAKALGA-KLIGTVSSPEKAAHAKA 183 (325)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 46789999999 33 47788888887665 89999999998887764
No 355
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.16 E-value=0.087 Score=48.20 Aligned_cols=42 Identities=26% Similarity=0.332 Sum_probs=33.2
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+|.+||-+|+|. |..++++|+..+..+|+++|.+++.++.++
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~ 206 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR 206 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 889999999864 677788888766548999999987766553
No 356
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=90.92 E-value=0.098 Score=48.25 Aligned_cols=45 Identities=20% Similarity=0.164 Sum_probs=36.2
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+|. |..++++|+..+. +|+++|.+++.++.++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~~~qlak~~Ga-~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 176 GCGPGKKVGIVGLGGIGSMGTLISKAMGA-ETYVISRSSRKREDAMK 221 (360)
T ss_dssp TCSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSSTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 346889999999864 6778888887765 79999999988887765
No 357
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.73 E-value=0.42 Score=42.98 Aligned_cols=39 Identities=8% Similarity=0.126 Sum_probs=32.3
Q ss_pred cEEEecC-C-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 65 DCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 65 ~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+||-.|+ | .|..++++|+..+. +|++++.+++.++.++.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga-~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGY-QVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 4999997 3 47888999988765 89999999988888765
No 358
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=90.43 E-value=0.97 Score=41.74 Aligned_cols=45 Identities=7% Similarity=-0.013 Sum_probs=34.7
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC-CceE-EEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN-CRSI-LGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~-~~~i-~g~Dis~~~l~~a~~~~ 106 (290)
...+++|+.||.|.++.-+.+..- ..-+ .++|+++.+++..+.|.
T Consensus 9 ~~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~ 55 (327)
T 3qv2_A 9 KQVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNF 55 (327)
T ss_dssp CCEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHH
T ss_pred CCCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHC
Confidence 346899999999999888766421 2346 79999999988887764
No 359
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=90.40 E-value=0.33 Score=44.78 Aligned_cols=44 Identities=23% Similarity=0.327 Sum_probs=35.2
Q ss_pred ccCCCcEEEec--CCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIG--CNSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiG--cG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-.| .|.|..++++++..+. +|+++|.+++.++.++.
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKAKC-HVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence 46889999999 3457788888887755 89999999888877654
No 360
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.05 E-value=0.52 Score=42.50 Aligned_cols=44 Identities=18% Similarity=0.141 Sum_probs=32.3
Q ss_pred hccCCCcEEEec-CCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIG-CNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiG-cG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+| +|. |..++++|+..+. +|++++ +++.++.++.
T Consensus 149 ~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga-~vi~~~-~~~~~~~~~~ 194 (321)
T 3tqh_A 149 EVKQGDVVLIHAGAGGVGHLAIQLAKQKGT-TVITTA-SKRNHAFLKA 194 (321)
T ss_dssp TCCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEE-CHHHHHHHHH
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcCC-EEEEEe-ccchHHHHHH
Confidence 346889999997 554 7888888888765 889887 5555555543
No 361
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=89.99 E-value=0.2 Score=46.17 Aligned_cols=43 Identities=23% Similarity=0.268 Sum_probs=33.1
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+.++.+||-.|++ .|..+.++++..+. +|+++|.+++.++.++
T Consensus 168 ~~~g~~vlV~GasggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~ 212 (351)
T 1yb5_A 168 VKAGESVLVHGASGGVGLAACQIARAYGL-KILGTAGTEEGQKIVL 212 (351)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred CCCcCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChhHHHHHH
Confidence 4678999999973 35677777776654 8999999998877654
No 362
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=89.22 E-value=0.24 Score=45.01 Aligned_cols=43 Identities=19% Similarity=0.200 Sum_probs=33.8
Q ss_pred ccCCCcEEEecC--CCChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 60 WFEGKDCLDIGC--NSGIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 60 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+.+|.+||-.|+ |.|..+..+++..+. +|+++|.+++.++.++
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKMMGC-YVVGSAGSKEKVDLLK 197 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 467899999997 346677777777654 8999999998877765
No 363
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.14 E-value=0.23 Score=45.34 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=35.1
Q ss_pred ccCCCcEEEecC--CCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGC--NSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.++.+||-.|+ |.|..++.+++..+. +|+++|.+++.++.++.
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLFGA-RVIATAGSEDKLRRAKA 209 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHh
Confidence 467899999998 456777888877654 89999999988877753
No 364
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=88.93 E-value=1.4 Score=40.69 Aligned_cols=43 Identities=9% Similarity=0.027 Sum_probs=33.4
Q ss_pred CcEEEecCCCChhhHHHHhHcCC-ceEEEEeCCHHHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNC-RSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~-~~i~g~Dis~~~l~~a~~~~ 106 (290)
.+++|+-||.|.+..-+.+.... .-+.++|+++.+++.-+.|.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~ 47 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF 47 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC
Confidence 47999999999998887665221 34779999999988777653
No 365
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=88.32 E-value=0.17 Score=46.36 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=35.3
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-.|++ .|..+.++++..+. +|++++.+++.++.++.
T Consensus 157 ~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 157 LRAGETVLVLGAAGGIGTAAIQIAKGMGA-KVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 4678999999973 46788888887765 89999999988877665
No 366
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=88.26 E-value=0.25 Score=45.13 Aligned_cols=44 Identities=20% Similarity=0.196 Sum_probs=33.2
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|++ .|..+..+++..+ .+|+++|.+++.++.++.
T Consensus 167 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G-a~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 167 LMAGHWVAISGAAGGLGSLAVQYAKAMG-YRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTT-CEEEEEECSTTHHHHHHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCC-CcEEEEcCCHHHHHHHHH
Confidence 4678999999983 4667777777655 489999999887766543
No 367
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=88.05 E-value=1.3 Score=40.23 Aligned_cols=45 Identities=2% Similarity=-0.139 Sum_probs=33.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcCCce-EEEEeCCHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFNCRS-ILGIDIDSNRVADAYWH 105 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~~~~-i~g~Dis~~~l~~a~~~ 105 (290)
....+++|+-||.|.++.-+.+...... ++++|+++.+++.-+.+
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N 59 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR 59 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh
Confidence 3457999999999999888766422222 68999999988776554
No 368
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=88.00 E-value=1.2 Score=42.50 Aligned_cols=45 Identities=13% Similarity=0.053 Sum_probs=35.6
Q ss_pred hccCCCcEEEecC-C-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+ | .|..++++|+..+. ++++++.++..++.++.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~Ga-~vi~~~~~~~~~~~~~~ 271 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAGGA-NPICVVSSPQKAEICRA 271 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcCC-eEEEEECCHHHHHHHHh
Confidence 3467899999997 4 37788888887654 88999999988887754
No 369
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=87.81 E-value=1.8 Score=40.85 Aligned_cols=45 Identities=16% Similarity=0.087 Sum_probs=34.9
Q ss_pred hccCCCcEEEecC-C-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-.|+ | .|..++++|+..+ .++++++.+++.++.++.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~G-a~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNGG-GIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTT-CEEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHcC-CEEEEEeCCHHHHHHHHh
Confidence 3567899999997 3 3677788888765 488999999988887754
No 370
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.30 E-value=0.42 Score=43.10 Aligned_cols=44 Identities=16% Similarity=0.167 Sum_probs=33.2
Q ss_pred ccCCCcEEEecC--CCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGC--NSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.++.+||-.|+ |.|.....+++..+. +|+++|.+++.++.++.
T Consensus 138 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~V~~~~~~~~~~~~~~~ 183 (327)
T 1qor_A 138 IKPDEQFLFHAAAGGVGLIACQWAKALGA-KLIGTVGTAQKAQSALK 183 (327)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHH
Confidence 467899999994 345666777776654 89999999988777654
No 371
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=87.25 E-value=0.22 Score=45.90 Aligned_cols=43 Identities=16% Similarity=0.202 Sum_probs=34.1
Q ss_pred cc-CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 60 WF-EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 60 ~~-~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+. +|.+||-+|+|. |..++++|+..+. +|+++|.+++.++.++
T Consensus 177 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 177 LKQPGLRGGILGLGGVGHMGVKIAKAMGH-HVTVISSSNKKREEAL 221 (357)
T ss_dssp TTSTTCEEEEECCSHHHHHHHHHHHHHTC-EEEEEESSTTHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCChHHHHHHH
Confidence 35 889999999864 6677788887765 8999999987776665
No 372
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=87.16 E-value=0.49 Score=43.42 Aligned_cols=43 Identities=16% Similarity=-0.000 Sum_probs=32.8
Q ss_pred ccCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 60 WFEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 60 ~~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+.+|.+||-.|++ .|..+..++...+. +|+++|.+++.++.++
T Consensus 160 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~ 204 (354)
T 2j8z_A 160 VQAGDYVLIHAGLSGVGTAAIQLTRMAGA-IPLVTAGSQKKLQMAE 204 (354)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHH
Confidence 4678999999843 45667777776554 8999999998887774
No 373
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.97 E-value=0.53 Score=42.45 Aligned_cols=44 Identities=9% Similarity=0.035 Sum_probs=33.8
Q ss_pred ccCCC-cEEEecC--CCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGK-DCLDIGC--NSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~-~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.++. +||-+|+ |.|..++++|+..+. +|++++.+++.++.++.
T Consensus 146 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~ 192 (328)
T 1xa0_A 146 LTPERGPVLVTGATGGVGSLAVSMLAKRGY-TVEASTGKAAEHDYLRV 192 (328)
T ss_dssp CCGGGCCEEESSTTSHHHHHHHHHHHHTTC-CEEEEESCTTCHHHHHH
T ss_pred CCCCCceEEEecCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHH
Confidence 45565 8999997 346788888887765 79999999887777654
No 374
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=86.69 E-value=0.81 Score=42.53 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=38.3
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+|. |..++++|+.++...|+++|.+++.++.++.
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 183 VGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 46889999999876 7888899988776689999999999888865
No 375
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=86.43 E-value=1.2 Score=40.80 Aligned_cols=63 Identities=17% Similarity=0.209 Sum_probs=40.7
Q ss_pred ceeEeecccccCCC-CCCCceeEEEEchhhhhh-hhcCCc-------hHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 162 IVSFKQENFVHGRD-SPEKYYDAILCLSVTKWI-HLNWGD-------DGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 162 ~i~~~~~d~~~~~~-~~~~~fD~I~~~~vl~~~-~l~~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
...+.++|..+.+. .+.++||+|++..-..-. .-.++. ..+..++..+.++|+|||.+++...
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 46778888765322 346789999995221000 000000 2467889999999999999999765
No 376
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=86.30 E-value=0.49 Score=43.41 Aligned_cols=44 Identities=20% Similarity=0.282 Sum_probs=34.4
Q ss_pred ccCCCcEEEecC-C-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-.|+ | .|..++++++..+. +|+++|.+++.++.++.
T Consensus 165 ~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga-~Vi~~~~~~~~~~~~~~ 210 (353)
T 4dup_A 165 LTEGESVLIHGGTSGIGTTAIQLARAFGA-EVYATAGSTGKCEACER 210 (353)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCHHHHHHHHHHHHcCC-EEEEEeCCHHHHHHHHh
Confidence 467899999953 3 46777888887655 89999999998887765
No 377
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=85.93 E-value=0.51 Score=43.60 Aligned_cols=42 Identities=17% Similarity=0.286 Sum_probs=31.3
Q ss_pred ccCCCcEEEec-CC-CChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 60 WFEGKDCLDIG-CN-SGIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 60 ~~~~~~vLDiG-cG-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+.+|.+||-.| +| .|..++++|+..+. +|++++ +++.++.++
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga-~Vi~~~-~~~~~~~~~ 224 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAWDA-HVTAVC-SQDASELVR 224 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHH
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCC-EEEEEe-ChHHHHHHH
Confidence 56789999999 44 47788888887664 899998 676665553
No 378
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=85.78 E-value=0.62 Score=42.15 Aligned_cols=44 Identities=16% Similarity=0.168 Sum_probs=33.7
Q ss_pred ccCCCcEEEecC--CCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGC--NSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.++.+||-.|+ |.|..+..++...+. +|+++|.+++.++.++.
T Consensus 143 ~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~-~Vi~~~~~~~~~~~~~~ 188 (333)
T 1wly_A 143 VKPGDYVLIHAAAGGMGHIMVPWARHLGA-TVIGTVSTEEKAETARK 188 (333)
T ss_dssp CCTTCEEEETTTTSTTHHHHHHHHHHTTC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 467899999996 446677777776654 89999999988777654
No 379
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.73 E-value=0.68 Score=41.80 Aligned_cols=44 Identities=14% Similarity=0.083 Sum_probs=33.5
Q ss_pred ccCCC-cEEEecC-C-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGK-DCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~-~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.++. +||-.|+ | .|..++++|+..+. +|++++.+++.++.++.
T Consensus 147 ~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga-~vi~~~~~~~~~~~~~~ 193 (330)
T 1tt7_A 147 LSPEKGSVLVTGATGGVGGIAVSMLNKRGY-DVVASTGNREAADYLKQ 193 (330)
T ss_dssp CCGGGCCEEEESTTSHHHHHHHHHHHHHTC-CEEEEESSSSTHHHHHH
T ss_pred cCCCCceEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 45665 8999997 3 46778888887764 79999999887777654
No 380
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=85.56 E-value=0.86 Score=42.12 Aligned_cols=42 Identities=12% Similarity=-0.009 Sum_probs=32.9
Q ss_pred cCCCcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+|.+||-+|++ .|..++++|+..+. +|+++. +++.++.++.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga-~Vi~~~-~~~~~~~~~~ 206 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLSGY-IPIATC-SPHNFDLAKS 206 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEE-CGGGHHHHHH
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHCCC-EEEEEe-CHHHHHHHHH
Confidence 678999999984 57888999988765 788885 8877776654
No 381
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=84.56 E-value=0.73 Score=42.12 Aligned_cols=45 Identities=20% Similarity=0.235 Sum_probs=33.4
Q ss_pred ccCC--CcEEEecCC--CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEG--KDCLDIGCN--SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~--~~vLDiGcG--~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.++ .+||-.|++ .|..+..+++..+..+|+++|.+++.++.+..
T Consensus 156 ~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~ 204 (357)
T 2zb4_A 156 ITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTS 204 (357)
T ss_dssp CCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHH
Confidence 4678 999999984 35666677776554489999999877766654
No 382
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=84.32 E-value=0.32 Score=44.86 Aligned_cols=41 Identities=7% Similarity=0.093 Sum_probs=31.4
Q ss_pred CCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCH---HHHHHHHH
Q 047406 63 GKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDS---NRVADAYW 104 (290)
Q Consensus 63 ~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~---~~l~~a~~ 104 (290)
|.+||-+|+|. |..++++++..+. +|+++|.++ +.++.++.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~~~~~ 225 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL-EVWMANRREPTEVEQTVIEE 225 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC-EEEEEESSCCCHHHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCccchHHHHHHHH
Confidence 89999999843 5666777777665 899999988 77666543
No 383
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=84.04 E-value=0.85 Score=41.61 Aligned_cols=43 Identities=19% Similarity=0.170 Sum_probs=33.2
Q ss_pred ccCCCcEEEecC-C-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-+|+ | .|..++++++..+. +|+++ .+++.++.++.
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga-~Vi~~-~~~~~~~~~~~ 192 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGA-RVFAT-ARGSDLEYVRD 192 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEE-ECHHHHHHHHH
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCC-EEEEE-eCHHHHHHHHH
Confidence 467899999994 3 37788888887665 89999 88888776654
No 384
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=83.85 E-value=4.3 Score=37.82 Aligned_cols=98 Identities=11% Similarity=0.008 Sum_probs=63.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhhH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTAA 141 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (290)
.+.+||.++.+.|.++..++.. .++.+.=|--+....+.|+..
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~----~~~~~~ds~~~~~~~~~n~~~--------------------------------- 80 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH----KPYSIGDSYISELATRENLRL--------------------------------- 80 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG----CCEEEESCHHHHHHHHHHHHH---------------------------------
T ss_pred CCCCEEEECCCCCHHHHhhccC----CceEEEhHHHHHHHHHHHHHH---------------------------------
Confidence 5578999999999999887754 234443244444555565554
Q ss_pred HHHHHhhhcCCCccccCcCc-ceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEE
Q 047406 142 QEEKKAISRNCSPAERNLFD-IVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFV 220 (290)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~-~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~ 220 (290)
+++.. .+.+.. .+......||+|+.. +......+...|.++...|.||+.++
T Consensus 81 ---------------~~~~~~~~~~~~-----~~~~~~~~~~~v~~~-------lpk~~~~l~~~L~~l~~~l~~~~~i~ 133 (375)
T 4dcm_A 81 ---------------NGIDESSVKFLD-----STADYPQQPGVVLIK-------VPKTLALLEQQLRALRKVVTSDTRII 133 (375)
T ss_dssp ---------------TTCCGGGSEEEE-----TTSCCCSSCSEEEEE-------CCSCHHHHHHHHHHHHTTCCTTSEEE
T ss_pred ---------------cCCCccceEecc-----cccccccCCCEEEEE-------cCCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 22221 133321 223355789999852 33345667888999999999999998
Q ss_pred Eee
Q 047406 221 LEP 223 (290)
Q Consensus 221 i~~ 223 (290)
+..
T Consensus 134 ~~g 136 (375)
T 4dcm_A 134 AGA 136 (375)
T ss_dssp EEE
T ss_pred EEe
Confidence 743
No 385
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=83.19 E-value=0.48 Score=43.77 Aligned_cols=43 Identities=19% Similarity=0.306 Sum_probs=33.5
Q ss_pred cc-CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 60 WF-EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 60 ~~-~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
+. +|.+||-+|+|. |..++++|+..+. +|+++|.+++.++.+.
T Consensus 184 ~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga-~Vi~~~~~~~~~~~~~ 228 (366)
T 1yqd_A 184 LDEPGKHIGIVGLGGLGHVAVKFAKAFGS-KVTVISTSPSKKEEAL 228 (366)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCGGGHHHHH
T ss_pred cCCCCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHH
Confidence 35 889999999764 6677777777654 8999999988776665
No 386
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=81.65 E-value=32 Score=31.59 Aligned_cols=174 Identities=7% Similarity=-0.007 Sum_probs=89.6
Q ss_pred CCCcEEEecCCCChhhHHHHhH-cCCceEEEEeCCHHHHHHHHHHHHHHHHhhhhhhhhhhhchhhhhhccCCcchhhhh
Q 047406 62 EGKDCLDIGCNSGIITIQIAQK-FNCRSILGIDIDSNRVADAYWHLRKIVRTEHNEKRRANASRVEVIEKGDGLEKNVTA 140 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~-~~~~~i~g~Dis~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (290)
+...|+.+|||.=.-...+... .+...++=+|. |+.++.=+..+......... ... ...-+
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~-lg~--~~~~~-------------- 151 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSP-ILE--LHSED-------------- 151 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHH-HHH--HSSSS--------------
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhh-hcc--ccccc--------------
Confidence 4578999999987777776543 13457888888 77776555444321000000 000 00000
Q ss_pred HHHHHHhhhcCCCccccC-cCcceeEeecccccC--C-------CCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHH
Q 047406 141 AQEEKKAISRNCSPAERN-LFDIVSFKQENFVHG--R-------DSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIW 210 (290)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~-~~~~i~~~~~d~~~~--~-------~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~ 210 (290)
........ ......++..|+.+. + .......-++++-.++.|+ ..+....+++.+.
T Consensus 152 ----------~~~~~~~~l~s~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL----~~~~~~~ll~~ia 217 (334)
T 3iei_A 152 ----------TLQMDGHILDSKRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYM----TPEQSANLLKWAA 217 (334)
T ss_dssp ----------SCBCCTTEEECSSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGS----CHHHHHHHHHHHH
T ss_pred ----------ccccccccCCCCceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCC----CHHHHHHHHHHHH
Confidence 00000000 123466777777551 1 1233556788888888555 4678889999999
Q ss_pred hhcCCCcEEEEeeC-CCchhhhhhhhhhhhh---cccccc-ccCchhHHHHHHHHcCCeeeEec
Q 047406 211 KLLRPGGIFVLEPQ-PWVSYEKNRRVSETTA---TNFQNI-KLYPKEFQEILLDKIGFRTVEDI 269 (290)
Q Consensus 211 ~~LkpgG~l~i~~~-~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~ll~~~Gf~~v~~~ 269 (290)
....++..++++.. +...+. +.+...+. ..+..+ .+.+.+-+...+..+||+.++..
T Consensus 218 ~~f~~~~~i~yE~i~p~d~fg--~~M~~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 218 NSFERAMFINYEQVNMGDRFG--QIMIENLRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp HHCSSEEEEEEEECCTTSHHH--HHHHHHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred HhCCCceEEEEeccCCCCHHH--HHHHHHHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 88765555555432 111111 11111111 122232 22333444557889999987654
No 387
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=81.64 E-value=13 Score=28.95 Aligned_cols=39 Identities=15% Similarity=0.214 Sum_probs=26.8
Q ss_pred CcEEEecCCCChhhHHHHhHc--CCceEEEEeCCHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKF--NCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~--~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+|+=+||| .++..+++.. ....|+++|.+++.++.+..
T Consensus 8 ~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~ 48 (140)
T 3fwz_A 8 NHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRE 48 (140)
T ss_dssp SCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence 578888875 4444444433 24589999999988876654
No 388
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=79.51 E-value=0.95 Score=41.26 Aligned_cols=42 Identities=17% Similarity=0.062 Sum_probs=29.3
Q ss_pred CC-CcEEEe-cCC-CChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EG-KDCLDI-GCN-SGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~-~~vLDi-GcG-~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++ .+||-. |+| .|..++++|+..+. +|+++|.+++.++.++.
T Consensus 163 ~g~~~vli~gg~g~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 207 (349)
T 3pi7_A 163 EGEKAFVMTAGASQLCKLIIGLAKEEGF-RPIVTVRRDEQIALLKD 207 (349)
T ss_dssp HCCSEEEESSTTSHHHHHHHHHHHHHTC-EEEEEESCGGGHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 45 566654 443 35677777777665 99999999988877754
No 389
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=78.82 E-value=3.3 Score=36.30 Aligned_cols=24 Identities=8% Similarity=0.007 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 201 GLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 201 ~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
-+...+..+.++|+|+|.+++...
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~~~ 75 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIFNT 75 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHhcCCeEEEEEcC
Confidence 346788889999999999999754
No 390
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=78.77 E-value=19 Score=38.28 Aligned_cols=43 Identities=12% Similarity=0.028 Sum_probs=33.3
Q ss_pred CCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~ 105 (290)
..+++|+-||.|.++.-+.+.....-+.++|+++.+++.-+.|
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N 582 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN 582 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh
Confidence 3589999999999988876652112577999999998876665
No 391
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=71.85 E-value=3.6 Score=37.48 Aligned_cols=38 Identities=18% Similarity=0.189 Sum_probs=27.6
Q ss_pred hccCC-CcEEEecC-C-CChhhHHHHhHcCCceEEEEeCCHH
Q 047406 59 EWFEG-KDCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDSN 97 (290)
Q Consensus 59 ~~~~~-~~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~~ 97 (290)
.+.+| .+||-.|+ | .|..++++|+..+. +++++.-+++
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga-~vi~~~~~~~ 203 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLLNF-NSISVIRDRP 203 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHHTC-EEEEEECCCT
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHCCC-EEEEEecCcc
Confidence 35678 99999997 3 46788888887765 6777765443
No 392
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=69.71 E-value=38 Score=34.32 Aligned_cols=43 Identities=12% Similarity=0.129 Sum_probs=33.2
Q ss_pred CcEEEecCCCChhhHHHHhHcC-----CceEEEEeCCHHHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN-----CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~-----~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.+++|+-||.|.++.-+.+... -.-+.++|+++.+++.-+.|.
T Consensus 213 ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 213 ATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 5899999999998877755421 114679999999998887764
No 393
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=69.16 E-value=6.5 Score=35.76 Aligned_cols=38 Identities=21% Similarity=0.240 Sum_probs=27.3
Q ss_pred hccCCCcEEEecC-C-CChhhHHHHhHcCCceEEEEeCCH
Q 047406 59 EWFEGKDCLDIGC-N-SGIITIQIAQKFNCRSILGIDIDS 96 (290)
Q Consensus 59 ~~~~~~~vLDiGc-G-~G~~~~~la~~~~~~~i~g~Dis~ 96 (290)
.+.+|.+||-+|+ | .|..++++|+..+...|..++.++
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~ 203 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP 203 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence 3468899999997 3 478888999887664455555543
No 394
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=68.89 E-value=5.7 Score=36.20 Aligned_cols=45 Identities=16% Similarity=0.360 Sum_probs=36.2
Q ss_pred hccCCCcEEEecCCC-ChhhHHHHhHc-CCceEEEEeCCHHHHHHHHH
Q 047406 59 EWFEGKDCLDIGCNS-GIITIQIAQKF-NCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 59 ~~~~~~~vLDiGcG~-G~~~~~la~~~-~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+.+|.+||-+|+|. |..++++|+.. +. +|+++|.+++.++.++.
T Consensus 183 ~~~~g~~VlV~GaG~vG~~avqlak~~~Ga-~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 183 TLYPGAYVAIVGVGGLGHIAVQLLKVMTPA-TVIALDVKEEKLKLAER 229 (359)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHCCC-EEEEEESSHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHH
Confidence 456889999999863 56777888877 54 89999999998888764
No 395
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=68.80 E-value=34 Score=29.33 Aligned_cols=34 Identities=26% Similarity=0.184 Sum_probs=22.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCC
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDID 95 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis 95 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+
T Consensus 8 l~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~ 43 (287)
T 3pxx_A 8 VQDKVVLVTGGARG-QGRSHAVKLAEEGADIILFDIC 43 (287)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEccc
Confidence 35788999997765 3333343332 4589999987
No 396
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=64.85 E-value=11 Score=34.33 Aligned_cols=62 Identities=11% Similarity=0.133 Sum_probs=37.8
Q ss_pred eeEe-ecccccCCC-CCCCceeEEEEchhhhhhhhcCC-----chHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 163 VSFK-QENFVHGRD-SPEKYYDAILCLSVTKWIHLNWG-----DDGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 163 i~~~-~~d~~~~~~-~~~~~fD~I~~~~vl~~~~l~~~-----~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
..+. ++|.++.+. .+.+++|+|++-.--.--.-.|. ..-+...+..+.++|+|||.+++...
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~~ 107 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFGG 107 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 4566 777765322 24568999998422100000000 02356788889999999999999764
No 397
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=60.55 E-value=46 Score=29.83 Aligned_cols=41 Identities=20% Similarity=0.247 Sum_probs=26.7
Q ss_pred CcEEEecCCC-C-hhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 64 KDCLDIGCNS-G-IITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 64 ~~vLDiGcG~-G-~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++|.=||+|. | .++..++.......|+++|.+++.++.+..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~ 76 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD 76 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH
Confidence 6899999774 2 344444433112289999999988776543
No 398
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=59.18 E-value=11 Score=35.72 Aligned_cols=42 Identities=12% Similarity=0.121 Sum_probs=31.4
Q ss_pred CcEEEecCCCChhhHHHHhHc-------CCceEEEEeCCHHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKF-------NCRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~-------~~~~i~g~Dis~~~l~~a~~~ 105 (290)
.+|+|+|.|+|.++..+.... ...+++.+|+|+...+.=++.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~ 130 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTL 130 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHH
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHH
Confidence 479999999999888776532 234899999999776644443
No 399
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=58.69 E-value=71 Score=34.96 Aligned_cols=42 Identities=12% Similarity=0.091 Sum_probs=33.0
Q ss_pred CCcEEEecCCCChhhHHHHhHcCC-ceEEEEeCCHHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFNC-RSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~~-~~i~g~Dis~~~l~~a~~~ 105 (290)
..+++|+-||.|.++.-+.+. +- .-+.++|+++.+++.-+.|
T Consensus 851 ~l~viDLFsG~GGlslGfe~A-G~~~vv~avEid~~A~~ty~~N 893 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA-GISETLWAIEMWDPAAQAFRLN 893 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT-TSEEEEEEECCSHHHHHHHHHH
T ss_pred CceEEecccCccHHHHHHHHC-CCCceEEEEECCHHHHHHHHHh
Confidence 468999999999998887654 22 2478999999998876665
No 400
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=56.92 E-value=58 Score=29.64 Aligned_cols=44 Identities=23% Similarity=0.284 Sum_probs=32.3
Q ss_pred CCcEEEecCCC-C-hhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 63 GKDCLDIGCNS-G-IITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 63 ~~~vLDiGcG~-G-~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
..+|.-||+|+ | .++..+|.. +..|+..|++++.++.+..+++.
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~--G~~V~l~D~~~~~l~~~~~~i~~ 51 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHH
Confidence 36788999885 2 244444443 56899999999999999888765
No 401
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=56.32 E-value=12 Score=31.41 Aligned_cols=31 Identities=16% Similarity=0.238 Sum_probs=28.5
Q ss_pred CcEEEecCCCChhhHHHHhHcCCceEEEEeC
Q 047406 64 KDCLDIGCNSGIITIQIAQKFNCRSILGIDI 94 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~~~~i~g~Di 94 (290)
.-|||+|-|+|.---.+...+|...|+++|-
T Consensus 42 GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 5799999999998888999999999999995
No 402
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=56.07 E-value=39 Score=29.57 Aligned_cols=46 Identities=22% Similarity=0.348 Sum_probs=34.1
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.+|+++|--|.+.|+ ++..+++. ..+|+.+|.+++.++.+.+.+..
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la~~--Ga~Vv~~~~~~~~~~~~~~~i~~ 53 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFALN--DSIVVAVELLEDRLNQIVQELRG 53 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHh
Confidence 378999999988774 44444443 56899999999998887776654
No 403
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=54.14 E-value=64 Score=23.91 Aligned_cols=38 Identities=26% Similarity=0.356 Sum_probs=25.1
Q ss_pred CCcEEEecCCCChhhHHHHhHc--CCceEEEEeCCHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKF--NCRSILGIDIDSNRVADA 102 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~--~~~~i~g~Dis~~~l~~a 102 (290)
+++|+=+|+ |.++..+++.+ ...+|+++|.+++.++..
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~ 43 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKA 43 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHH
Confidence 467888877 55555555433 245899999998766544
No 404
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=53.76 E-value=21 Score=27.28 Aligned_cols=40 Identities=10% Similarity=0.222 Sum_probs=28.5
Q ss_pred CCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
.++++-+||| .++..+++.+. +.+|+++|.+++.++.+..
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~ 47 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLED 47 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH
Confidence 4689999885 45555555432 4589999999988776654
No 405
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=53.11 E-value=28 Score=28.95 Aligned_cols=39 Identities=13% Similarity=0.285 Sum_probs=25.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVA 100 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~ 100 (290)
..+++||-.|+ +|.++..+++.+- +.+|++++-++..++
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~ 59 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGP 59 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHH
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHH
Confidence 36789998885 5555555555432 458999999876544
No 406
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=53.10 E-value=15 Score=33.38 Aligned_cols=48 Identities=21% Similarity=0.190 Sum_probs=27.7
Q ss_pred CCCCCceeEEEEchhhh-----hhhhcCCchHHHHHHHHHHhhcCCCcEEEEe
Q 047406 175 DSPEKYYDAILCLSVTK-----WIHLNWGDDGLITLFMRIWKLLRPGGIFVLE 222 (290)
Q Consensus 175 ~~~~~~fD~I~~~~vl~-----~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (290)
|...+.||+|+++--.. |--+--....+..+-....++|+|||.+++.
T Consensus 206 P~~~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~ 258 (324)
T 3trk_A 206 PATLGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIR 258 (324)
T ss_dssp CGGGCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEE
T ss_pred CCcCCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEE
Confidence 33348999999963322 1000000011234455667889999999996
No 407
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=52.33 E-value=9.6 Score=34.93 Aligned_cols=36 Identities=19% Similarity=0.229 Sum_probs=30.9
Q ss_pred CCCcEEEecCCCChhhHHHHhHcCC----ceEEEEeCCHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFNC----RSILGIDIDSN 97 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~~----~~i~g~Dis~~ 97 (290)
.+..|+=+|||+|.....+++.++. .+.+++|..+.
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 4679999999999999999998875 48999998663
No 408
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=52.29 E-value=13 Score=34.21 Aligned_cols=43 Identities=19% Similarity=0.122 Sum_probs=33.6
Q ss_pred cCCCcEEEecCCC---ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNS---GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~---G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.+|.+||-+|+|+ |..++++|+..+. +|+++|.+++.++.++.
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga-~Vi~~~~~~~~~~~~~~ 214 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKDGI-KLVNIVRKQEQADLLKA 214 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHHTC-CEEEEESSHHHHHHHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHh
Confidence 5789999985444 5666777777665 89999999998888765
No 409
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=51.95 E-value=42 Score=30.72 Aligned_cols=53 Identities=21% Similarity=0.109 Sum_probs=30.6
Q ss_pred ecccccCCCCCCCceeEEEEchhhh----h-hh-hcCCchHHHHHHHHHHhhcCCCcEEEEe
Q 047406 167 QENFVHGRDSPEKYYDAILCLSVTK----W-IH-LNWGDDGLITLFMRIWKLLRPGGIFVLE 222 (290)
Q Consensus 167 ~~d~~~~~~~~~~~fD~I~~~~vl~----~-~~-l~~~~~~~~~~l~~~~~~LkpgG~l~i~ 222 (290)
++|+... ...+.+|+|++..... + -- .+ ....+.-++.....+|+|||.|++.
T Consensus 195 ~lDfg~p--~~~~k~DvV~SDMApn~sGh~yqQC~D-Harii~Lal~fA~~vLkPGGtfV~K 253 (320)
T 2hwk_A 195 RLDLGIP--GDVPKYDIIFVNVRTPYKYHHYQQCED-HAIKLSMLTKKACLHLNPGGTCVSI 253 (320)
T ss_dssp CGGGCSC--TTSCCEEEEEEECCCCCCSCHHHHHHH-HHHHHHHTHHHHGGGEEEEEEEEEE
T ss_pred ccccCCc--cccCcCCEEEEcCCCCCCCccccccch-HHHHHHHHHHHHHHhcCCCceEEEE
Confidence 6777652 2236799999942221 1 00 00 0011123566778899999999995
No 410
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=51.20 E-value=65 Score=24.93 Aligned_cols=37 Identities=14% Similarity=0.202 Sum_probs=23.8
Q ss_pred CCcEEEecCCCChhhHHHHhHcC--CceEEEEeCC-HHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFN--CRSILGIDID-SNRVAD 101 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis-~~~l~~ 101 (290)
..+++=+|+ |.++..+++... ...|+++|.+ ++.++.
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~ 42 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQ 42 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHH
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHH
Confidence 457787775 666666655442 4589999997 444433
No 411
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=51.04 E-value=1.7e+02 Score=29.01 Aligned_cols=54 Identities=4% Similarity=0.018 Sum_probs=34.6
Q ss_pred ceeEeecccccC---------CCC-CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEE
Q 047406 162 IVSFKQENFVHG---------RDS-PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 162 ~i~~~~~d~~~~---------~~~-~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i 221 (290)
...++..|+.+. ... .....-++++-.++.|+ ..+....+|+.+.++ |++.+++
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl----~~~~~~~ll~~~~~~--~~~~~~~ 252 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYM----KPERSDSIIEATSKM--ENSHFII 252 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGS----CHHHHHHHHHHHHTS--SSEEEEE
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEc----CHHHHHHHHHHHhhC--CCceEEE
Confidence 456777777651 111 23456777777787555 467888999988864 5665555
No 412
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=50.93 E-value=1.1e+02 Score=25.75 Aligned_cols=34 Identities=15% Similarity=0.314 Sum_probs=25.8
Q ss_pred CcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRV 99 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l 99 (290)
++||-.|+ |.++..++..+- +.+|++++-++...
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~ 41 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQM 41 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGH
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhh
Confidence 68999994 888887776653 35899999887543
No 413
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=49.96 E-value=1e+02 Score=26.50 Aligned_cols=46 Identities=22% Similarity=0.281 Sum_probs=28.6
Q ss_pred ccCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 60 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
+..++++|-.|++.| ++..+++.+. +.+|+.++.+++.++.+...+
T Consensus 21 m~~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l 68 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGL 68 (279)
T ss_dssp ----CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 356789999997665 3333443331 458999999988777665544
No 414
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=49.90 E-value=61 Score=28.71 Aligned_cols=45 Identities=18% Similarity=0.290 Sum_probs=31.8
Q ss_pred CCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 62 ~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.+++||-.|++.|+ ++..+++. +.+|++++.++..++.+...+..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~--G~~Vv~~~r~~~~~~~~~~~l~~ 54 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQ--GCKVAIADIRQDSIDKALATLEA 54 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHh
Confidence 57889999987763 33333333 45899999999888777665543
No 415
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=48.47 E-value=14 Score=35.52 Aligned_cols=46 Identities=11% Similarity=0.177 Sum_probs=34.7
Q ss_pred CCcEEEecCCCChhhHHHHhHcC-----CceEEEEeCCHHHHHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFN-----CRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~-----~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
..+|+|+|.|+|.++..+..... ..+++.+|+|+...+.-++.+..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 47999999999998777765431 23799999999877666665543
No 416
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=47.55 E-value=20 Score=34.70 Aligned_cols=43 Identities=9% Similarity=0.019 Sum_probs=33.9
Q ss_pred CCcEEEecCCCChhhHHHHhHcCCceEEEEeCCHHHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFNCRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~ 106 (290)
..+++|+-||.|.++.-+.+. +..-|+++|+++.+++.-+.|.
T Consensus 88 ~~~viDLFaG~GGlslG~~~a-G~~~v~avE~d~~A~~ty~~N~ 130 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI-GGQCVFTSEWNKHAVRTYKANH 130 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT-TEEEEEEECCCHHHHHHHHHHS
T ss_pred cceEEEecCCccHHHHHHHHC-CCEEEEEEeCCHHHHHHHHHhc
Confidence 368999999999998887654 2234789999999988777664
No 417
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=47.47 E-value=51 Score=30.93 Aligned_cols=40 Identities=10% Similarity=0.071 Sum_probs=28.0
Q ss_pred CCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|+-+|+| .++..+++... ...|+++|.+++.++.++.
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~~vvvId~d~~~v~~~~~ 45 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGVKMVVLDHDPDHIETLRK 45 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh
Confidence 4678888774 45555554332 4589999999999887754
No 418
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=47.12 E-value=16 Score=42.56 Aligned_cols=44 Identities=18% Similarity=0.108 Sum_probs=34.8
Q ss_pred ccCCCcEEEecC--CCChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGC--NSGIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
+.+|.+||-.|+ |.|..++++|+..+. +|++++.+++..+.++.
T Consensus 1665 l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga-~Viat~~s~~k~~~l~~ 1710 (2512)
T 2vz8_A 1665 MQPGESVLIHSGSGGVGQAAIAIALSRGC-RVFTTVGSAEKRAYLQA 1710 (2512)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCCEEEEEeCChHHHHHHHHHHHHcCC-EEEEEeCChhhhHHHHh
Confidence 468899999974 357788888888764 89999999887776654
No 419
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=45.74 E-value=76 Score=27.66 Aligned_cols=46 Identities=13% Similarity=0.157 Sum_probs=31.4
Q ss_pred cCCCcEEEecCCCChhhHHHHhHc---C--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKF---N--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~---~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..++..+ + ...|+.++.+++.++.+...+.
T Consensus 31 l~~k~~lVTGas~G-IG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~ 81 (287)
T 3rku_A 31 LAKKTVLITGASAG-IGKATALEYLEASNGDMKLILAARRLEKLEELKKTID 81 (287)
T ss_dssp HTTCEEEEESTTSH-HHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCEEEEecCCCh-HHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHH
Confidence 36889999997665 344444433 1 2389999999988877766544
No 420
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=45.59 E-value=27 Score=32.26 Aligned_cols=43 Identities=21% Similarity=0.331 Sum_probs=31.3
Q ss_pred cCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.++.+|+-+|+|. |.....++..++. +|+++|.++..++.+..
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~Ga-~V~~~d~~~~~l~~~~~ 209 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGMGA-TVTVLDINIDKLRQLDA 209 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHH
Confidence 3678999999864 4444445555554 89999999988777654
No 421
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=45.39 E-value=1.1e+02 Score=26.26 Aligned_cols=40 Identities=18% Similarity=0.180 Sum_probs=26.2
Q ss_pred CcEEEecCCC-C-hhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 64 KDCLDIGCNS-G-IITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 64 ~~vLDiGcG~-G-~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
++|.=||+|. | .++..++......+|++.|.+++.++.+.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~ 48 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIAL 48 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHH
Confidence 5788899876 2 34444444322458999999988776543
No 422
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=44.72 E-value=1.5e+02 Score=30.09 Aligned_cols=43 Identities=16% Similarity=0.129 Sum_probs=32.8
Q ss_pred CcEEEecCCCC--hhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 64 KDCLDIGCNSG--IITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 64 ~~vLDiGcG~G--~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.+|--||+|+- .++..+|. .+..|+..|++++.++.++..+..
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a~--aG~~V~l~D~~~~~l~~~~~~i~~ 361 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFAR--VGISVVAVESDPKQLDAAKKIITF 361 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHHT--TTCEEEEECSSHHHHHHHHHHHHH
T ss_pred cEEEEEcccHHHHHHHHHHHh--CCCchhcccchHhhhhhHHHHHHH
Confidence 48999999873 34444444 356999999999999999887765
No 423
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.64 E-value=1.3e+02 Score=24.68 Aligned_cols=38 Identities=13% Similarity=0.090 Sum_probs=25.7
Q ss_pred CcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAY 103 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~ 103 (290)
++|+=+|+ |.++..+++.+. ...|+++|.+++.++...
T Consensus 1 M~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~ 40 (218)
T 3l4b_C 1 MKVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFA 40 (218)
T ss_dssp CCEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH
Confidence 35666765 666666665442 458999999998876543
No 424
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=44.35 E-value=1.4e+02 Score=24.86 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=30.8
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
.++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.....+.
T Consensus 8 ~~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 54 (253)
T 3qiv_A 8 ENKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIV 54 (253)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHH
Confidence 5788999997655 4444444332 4589999999988777666543
No 425
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=43.67 E-value=47 Score=29.09 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=33.6
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
..|+++|--|.+.|+ ++..+++. ..+|+.+|.+++.++.+...+..
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~--Ga~Vvi~~~~~~~~~~~~~~l~~ 55 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAA--GARVILNDIRATLLAESVDTLTR 55 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHT--TCEEEECCSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHh
Confidence 478999999987763 44444443 56899999999988877665544
No 426
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=42.73 E-value=34 Score=36.74 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=36.3
Q ss_pred cCcceeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCc
Q 047406 159 LFDIVSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGG 217 (290)
Q Consensus 159 ~~~~i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG 217 (290)
+...-.|.+.|++...--...++|.+.|...|- -........+...+.++.+.+++.|
T Consensus 861 w~~~T~f~~~DyL~~~~~~~~~~D~vt~i~SLG-AA~A~a~~tl~~~~~q~l~~~~~~~ 918 (1289)
T 1ej6_A 861 WNVRTTFLELDYLSDGWITGVRGDIVTCMLSLG-AAAAGKSMTFDAAFQQLIKVLSKST 918 (1289)
T ss_dssp BSSCEEEEESCTTSSSCGGGCCCSEEEECSCHH-HHHHHHTCCHHHHHHHHHHHHHTSC
T ss_pred ccccceeeEccccccceeecCCCcEEEEEeech-hhhhccCCcHHHHHHHHHHHHHhcC
Confidence 444588999999874222346799999987663 1111122345667777777776655
No 427
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=42.46 E-value=89 Score=26.45 Aligned_cols=45 Identities=20% Similarity=0.254 Sum_probs=31.0
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.|+ ++..+++. ..+|+.+|.+++.++.....+.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~ 57 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKA--GASVVVTDLKSEGAEAVAAAIR 57 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHH
Confidence 467889998877663 33444443 4589999999988776665543
No 428
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=42.45 E-value=1.3e+02 Score=23.89 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=26.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHc--C-CceEEEEeCCHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKF--N-CRSILGIDIDSNRVADAY 103 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~--~-~~~i~g~Dis~~~l~~a~ 103 (290)
.+.+|+-+||| .++..+++.. . +..|+++|.+++.++.+.
T Consensus 38 ~~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~ 80 (183)
T 3c85_A 38 GHAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHR 80 (183)
T ss_dssp TTCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHH
Confidence 46789999875 4444444332 1 347999999998776654
No 429
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=42.33 E-value=89 Score=27.15 Aligned_cols=43 Identities=16% Similarity=0.193 Sum_probs=29.2
Q ss_pred CcEEEecCCCChhhHHHHhHc--CCceEEEEeCCHHHHHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKF--NCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~--~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
++|.-||+|. ++..+|+.+ ...+|+..|.+++.++.+...+..
T Consensus 5 ~kV~VIGaG~--mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~ 49 (283)
T 4e12_A 5 TNVTVLGTGV--LGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEG 49 (283)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHH
T ss_pred CEEEEECCCH--HHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 5688888765 333333322 245899999999999888876544
No 430
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=42.21 E-value=85 Score=27.39 Aligned_cols=46 Identities=28% Similarity=0.438 Sum_probs=31.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..++..+. +.+|+.++.+++.++.+...+.
T Consensus 29 l~gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 76 (301)
T 3tjr_A 29 FDGRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLR 76 (301)
T ss_dssp STTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 36789999998765 3333343331 4589999999988877766544
No 431
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=42.07 E-value=47 Score=29.41 Aligned_cols=42 Identities=14% Similarity=0.134 Sum_probs=30.9
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
..|+++|--|.++|+ ++..+++. ..+|+.+|.+++.++.+.+
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~--Ga~V~i~~r~~~~l~~~~~ 71 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAE--GARVFITGRRKDVLDAAIA 71 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH
Confidence 478999999988773 44444443 5699999999988876654
No 432
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=41.54 E-value=1.5e+02 Score=25.45 Aligned_cols=41 Identities=17% Similarity=0.310 Sum_probs=27.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADA 102 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a 102 (290)
..+++||-.|+ +|.++..++..+. +.+|++++.++...+..
T Consensus 9 ~~~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 51 (342)
T 1y1p_A 9 PEGSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANL 51 (342)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHH
Confidence 46788998885 5666666655432 45899999987665443
No 433
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=41.07 E-value=31 Score=33.57 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=31.8
Q ss_pred ccCCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 60 WFEGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 60 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
..+|++|+-+|+|. |......++.++ .+|+++|.++..++.|..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~G-a~Viv~d~~~~~~~~A~~ 315 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQG-ARVSVTEIDPINALQAMM 315 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CEEEEECSCHHHHHHHHH
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHH
Confidence 46789999999864 444444455554 489999999988766643
No 434
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=40.85 E-value=1.3e+02 Score=25.87 Aligned_cols=44 Identities=11% Similarity=-0.035 Sum_probs=29.4
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEe-CCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGID-IDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~D-is~~~l~~a~~~~ 106 (290)
.++++|-.|++.| ++..+++.+. ..+|+.++ .+++.++.+...+
T Consensus 8 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l 54 (291)
T 1e7w_A 8 TVPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL 54 (291)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHH
Confidence 5678888887655 4444444432 45899999 9987776655543
No 435
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=40.81 E-value=1.6e+02 Score=27.88 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=30.1
Q ss_pred CcEEEecCCC-C-hhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHH
Q 047406 64 KDCLDIGCNS-G-IITIQIAQKFNCRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 64 ~~vLDiGcG~-G-~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
++|.-||+|. | .++..++.. ...|+++|.+++.++.+...+.
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~--G~~V~l~D~~~~~~~~~~~~i~ 81 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARV--GISVVAVESDPKQLDAAKKIIT 81 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHH
T ss_pred CEEEEECcCHHHHHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHH
Confidence 5799999886 3 244444432 4589999999999988877554
No 436
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=40.72 E-value=1.5e+02 Score=24.44 Aligned_cols=37 Identities=8% Similarity=0.039 Sum_probs=26.4
Q ss_pred CCcEEEecCCCChhhHHHHhHcCC--ceEEEEeCCHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKFNC--RSILGIDIDSNRVADA 102 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~~~--~~i~g~Dis~~~l~~a 102 (290)
..+++=+|+ |.++..+++.... . |+++|.+++.++.+
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~ 47 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVL 47 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHH
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHH
Confidence 467888887 6777777776643 4 89999988776544
No 437
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=40.53 E-value=87 Score=26.53 Aligned_cols=46 Identities=17% Similarity=0.260 Sum_probs=31.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..+++.+. +.+|+.++.+++.++.....+.
T Consensus 27 l~~k~vlITGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~ 74 (262)
T 3rkr_A 27 LSGQVAVVTGASRG-IGAAIARKLGSLGARVVLTARDVEKLRAVEREIV 74 (262)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 36788999987654 4444444432 4589999999988777666544
No 438
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=40.18 E-value=68 Score=27.25 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=29.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++....
T Consensus 6 l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (255)
T 4eso_A 6 YQGKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIRE 50 (255)
T ss_dssp TTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 36788999997665 3344444331 4589999999887765544
No 439
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=40.18 E-value=24 Score=33.10 Aligned_cols=41 Identities=15% Similarity=0.223 Sum_probs=31.8
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~ 103 (290)
++.+|+-+|+|. |..+..++..++. .|+++|.++..++.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSLGA-IVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCGGGHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHH
Confidence 578999999985 5556666666664 8999999998777663
No 440
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=40.11 E-value=86 Score=26.97 Aligned_cols=45 Identities=24% Similarity=0.187 Sum_probs=30.5
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
.++++|-.|++.| ++..+++.+. +.+|+.++.+++.++.+...+.
T Consensus 3 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~ 49 (264)
T 3tfo_A 3 MDKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIR 49 (264)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 5678888887765 3344444331 4589999999988777666544
No 441
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=40.00 E-value=1.7e+02 Score=24.71 Aligned_cols=46 Identities=20% Similarity=0.162 Sum_probs=31.2
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.+...+.
T Consensus 6 l~~k~~lVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 53 (265)
T 3lf2_A 6 LSEAVAVVTGGSSG-IGLATVELLLEAGAAVAFCARDGERLRAAESALR 53 (265)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 36788999997766 3333343331 4589999999988777666543
No 442
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=39.89 E-value=1.7e+02 Score=24.68 Aligned_cols=45 Identities=11% Similarity=0.144 Sum_probs=31.9
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.|+ ++..+++. ..+|+.+|.+++.++.....+.
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~ 56 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQ--GADLVLAARTVERLEDVAKQVT 56 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHC--cCEEEEEeCCHHHHHHHHHHHH
Confidence 467899999987773 34444443 4589999999988777666543
No 443
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=39.86 E-value=59 Score=27.58 Aligned_cols=47 Identities=17% Similarity=0.171 Sum_probs=31.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
..++++|-.|++.| ++..+++.+. +.+|+.+|.+++.++.+...+..
T Consensus 5 ~~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~ 53 (252)
T 3h7a_A 5 PRNATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEA 53 (252)
T ss_dssp CCSCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 35788999987766 3333443331 45899999998887777665543
No 444
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=38.71 E-value=39 Score=30.87 Aligned_cols=42 Identities=14% Similarity=0.161 Sum_probs=31.4
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++.+|+-+|+|. |.....++..++. +|+++|.+++.++.+..
T Consensus 166 ~~~~VlViGaGgvG~~aa~~a~~~Ga-~V~v~dr~~~r~~~~~~ 208 (361)
T 1pjc_A 166 KPGKVVILGGGVVGTEAAKMAVGLGA-QVQIFDINVERLSYLET 208 (361)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEeCCHHHHHHHHH
Confidence 458999999864 4455555666665 89999999988877754
No 445
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=38.53 E-value=1.3e+02 Score=25.57 Aligned_cols=36 Identities=11% Similarity=0.228 Sum_probs=22.5
Q ss_pred cEEEecCCC-C-hhhHHHHhHcCCceEEEEeCCHHHHHHH
Q 047406 65 DCLDIGCNS-G-IITIQIAQKFNCRSILGIDIDSNRVADA 102 (290)
Q Consensus 65 ~vLDiGcG~-G-~~~~~la~~~~~~~i~g~Dis~~~l~~a 102 (290)
+|.=||||. | .++..++.. ..+|+++|.+++.++.+
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~--g~~V~~~~~~~~~~~~~ 39 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRR--GHYLIGVSRQQSTCEKA 39 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHH
T ss_pred EEEEEcCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHH
Confidence 577788764 2 223333332 34899999998876654
No 446
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=38.42 E-value=4.2 Score=41.86 Aligned_cols=36 Identities=17% Similarity=0.295 Sum_probs=28.6
Q ss_pred ccCCCcEEEecC--CCChhhHHHHhHcCCceEEEEeCCH
Q 047406 60 WFEGKDCLDIGC--NSGIITIQIAQKFNCRSILGIDIDS 96 (290)
Q Consensus 60 ~~~~~~vLDiGc--G~G~~~~~la~~~~~~~i~g~Dis~ 96 (290)
+.+|.+||-.|+ |.|..++++|+..+. +|++++-++
T Consensus 343 l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga-~V~~t~~~~ 380 (795)
T 3slk_A 343 LRPGESLLVHSAAGGVGMAAIQLARHLGA-EVYATASED 380 (795)
T ss_dssp CCTTCCEEEESTTBHHHHHHHHHHHHTTC-CEEEECCGG
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHcCC-EEEEEeChH
Confidence 468899999995 457899999998765 899998543
No 447
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=37.96 E-value=93 Score=28.69 Aligned_cols=42 Identities=19% Similarity=0.218 Sum_probs=29.2
Q ss_pred CCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEEee
Q 047406 177 PEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEP 223 (290)
Q Consensus 177 ~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (290)
+...||+|+...-- ..+...++..|.++...|+|||.+++..
T Consensus 98 ~~~~~d~v~~~~Pk-----~k~~~~~~~~l~~~~~~l~~g~~i~~~g 139 (381)
T 3dmg_A 98 AAGAYDLVVLALPA-----GRGTAYVQASLVAAARALRMGGRLYLAG 139 (381)
T ss_dssp CTTCEEEEEEECCG-----GGCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCCCCEEEEECCc-----chhHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 45789999852110 0011346788999999999999999854
No 448
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=37.70 E-value=55 Score=28.06 Aligned_cols=43 Identities=14% Similarity=0.219 Sum_probs=29.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.+..
T Consensus 28 l~~k~vlVTGas~G-IG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~ 72 (281)
T 3ppi_A 28 FEGASAIVSGGAGG-LGEATVRRLHADGLGVVIADLAAEKGKALAD 72 (281)
T ss_dssp GTTEEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCChHHHHHHHH
Confidence 36788999997765 3344443331 4589999999887766544
No 449
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=37.52 E-value=77 Score=31.72 Aligned_cols=76 Identities=22% Similarity=0.233 Sum_probs=42.0
Q ss_pred CCCCCCceeEEEEchhhh-----hhhhcCCchHHHHHHHHHHhhcCCCcEEEEeeCCCchhhhhhhhhhhhhcccccccc
Q 047406 174 RDSPEKYYDAILCLSVTK-----WIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPQPWVSYEKNRRVSETTATNFQNIKL 248 (290)
Q Consensus 174 ~~~~~~~fD~I~~~~vl~-----~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (290)
+|. .++||+|+++--.. |--+--..-.+..+-....++|+|||.+++.. |.-+. -
T Consensus 216 ~p~-~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~-----YGyAD--------------r 275 (670)
T 4gua_A 216 FPP-QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKS-----YGYAD--------------R 275 (670)
T ss_dssp CCC-CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEE-----SCCCS--------------H
T ss_pred CCC-CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEE-----eeccc--------------c
Confidence 443 47999999953221 11000000122455567789999999999963 22222 2
Q ss_pred CchhHHHHHHHHcCCeeeEeccC
Q 047406 249 YPKEFQEILLDKIGFRTVEDIGS 271 (290)
Q Consensus 249 ~~~~~~~~ll~~~Gf~~v~~~~~ 271 (290)
.++..+..+.++ |+.+.+...
T Consensus 276 ~sE~vv~alaRk--F~~~rv~~p 296 (670)
T 4gua_A 276 NSEDVVTALARK--FVRVSAARP 296 (670)
T ss_dssp HHHHHHHHHHHT--EEEEEEECC
T ss_pred chHHHHHHHHhh--eeeeeeeCC
Confidence 234445544444 777777766
No 450
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=37.25 E-value=1.2e+02 Score=25.52 Aligned_cols=46 Identities=13% Similarity=0.125 Sum_probs=31.6
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
..++++|-.|++.|+ ++..+++. +.+|+.++.+++.++.+...+..
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~--G~~V~~~~r~~~~~~~~~~~~~~ 53 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATD--GYRVVLIARSKQNLEKVHDEIMR 53 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHH--TCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHH
Confidence 357889988877663 33444443 45899999999888777665543
No 451
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=37.05 E-value=1.2e+02 Score=25.70 Aligned_cols=44 Identities=11% Similarity=0.104 Sum_probs=29.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++++|-.|++. .++..+++.+. +.+|++++.++..++.....+
T Consensus 31 ~~k~vlVTGasg-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~ 76 (279)
T 1xg5_A 31 RDRLALVTGASG-GIGAAVARALVQQGLKVVGCARTVGNIEELAAEC 76 (279)
T ss_dssp TTCEEEEESTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHH
Confidence 578899888654 44444444332 458999999987776555443
No 452
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=36.58 E-value=97 Score=26.33 Aligned_cols=46 Identities=24% Similarity=0.294 Sum_probs=31.2
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.....+..
T Consensus 9 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~ 56 (267)
T 3t4x_A 9 KGKTALVTGSTAG-IGKAIATSLVAEGANVLINGRREENVNETIKEIRA 56 (267)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh
Confidence 5788998887655 4444444332 45899999999887776665543
No 453
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=36.46 E-value=51 Score=23.68 Aligned_cols=39 Identities=23% Similarity=0.114 Sum_probs=26.6
Q ss_pred CCcEEEecCCCChhhHHHHhHc---CCceEEEEeCCHHHHHHHH
Q 047406 63 GKDCLDIGCNSGIITIQIAQKF---NCRSILGIDIDSNRVADAY 103 (290)
Q Consensus 63 ~~~vLDiGcG~G~~~~~la~~~---~~~~i~g~Dis~~~l~~a~ 103 (290)
+++|+-+|+ |.++..+++.+ +..+|+++|.++..++...
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~ 46 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN 46 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH
Confidence 468999998 55555444332 3368999999988766554
No 454
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=36.44 E-value=1.8e+02 Score=24.15 Aligned_cols=41 Identities=24% Similarity=0.284 Sum_probs=28.1
Q ss_pred CCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
.++++|-.|++.|+ ++..+++. ..+|+.+|.++..++....
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~ 51 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKG--GAKVVIVDRDKAGAERVAG 51 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 57889999977653 33444433 4589999999877665544
No 455
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=35.99 E-value=31 Score=32.68 Aligned_cols=42 Identities=12% Similarity=0.229 Sum_probs=32.9
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++.+|+-+|+|. |..+..++..++. +|+++|.++..++.+..
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGA-VVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHH
Confidence 568999999985 5666666666654 89999999988777765
No 456
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=35.25 E-value=1.8e+02 Score=25.77 Aligned_cols=44 Identities=11% Similarity=-0.035 Sum_probs=29.2
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEe-CCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGID-IDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~D-is~~~l~~a~~~~ 106 (290)
.++++|-.|++.| ++..+++.+. ..+|+.++ .+++.++.+...+
T Consensus 45 ~~k~~lVTGas~G-IG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l 91 (328)
T 2qhx_A 45 TVPVALVTGAAKR-LGRSIAEGLHAEGYAVCLHYHRSAAEANALSATL 91 (328)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHH
Confidence 5788888886654 4444444432 45899999 9887776665543
No 457
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=35.09 E-value=1.2e+02 Score=27.34 Aligned_cols=43 Identities=23% Similarity=0.287 Sum_probs=30.6
Q ss_pred CcEEEecCCC-C-hhhHHHHhHcCCceEEEEeCCHHHHHHHHHHHHH
Q 047406 64 KDCLDIGCNS-G-IITIQIAQKFNCRSILGIDIDSNRVADAYWHLRK 108 (290)
Q Consensus 64 ~~vLDiGcG~-G-~~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~~~ 108 (290)
.+|--||+|. | .++..++.. +..|++.|.+++.++.+...+..
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~--G~~V~l~d~~~~~~~~~~~~i~~ 51 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASG--GFRVKLYDIEPRQITGALENIRK 51 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHT--TCCEEEECSCHHHHHHHHHHHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHHHHHH
Confidence 5688888875 2 344444443 45899999999999988776544
No 458
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=35.07 E-value=1.6e+02 Score=24.28 Aligned_cols=44 Identities=18% Similarity=0.074 Sum_probs=29.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHc---CCceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKF---NCRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~---~~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.+++||-.|+ +|.++..+++.+ .+.+|++++.++..++.....+
T Consensus 3 ~~k~vlITGa-sggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l 49 (276)
T 1wma_A 3 GIHVALVTGG-NKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQL 49 (276)
T ss_dssp CCCEEEESSC-SSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHH
Confidence 4678887775 555555555543 2458999999987766655443
No 459
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=35.03 E-value=1.2e+02 Score=25.90 Aligned_cols=46 Identities=24% Similarity=0.335 Sum_probs=30.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.+...+.
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~ 56 (281)
T 3svt_A 9 FQDRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELE 56 (281)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 36788999987655 3444444332 4589999999988777665443
No 460
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=34.17 E-value=1.3e+02 Score=24.84 Aligned_cols=45 Identities=16% Similarity=0.267 Sum_probs=30.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
.++++|-.|++.| ++..+++.+. ..+|++++.++..++.....+.
T Consensus 4 ~~k~vlITGas~g-IG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~ 50 (247)
T 3lyl_A 4 NEKVALVTGASRG-IGFEVAHALASKGATVVGTATSQASAEKFENSMK 50 (247)
T ss_dssp TTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 5678888886654 4444444332 4589999999988776665443
No 461
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=34.09 E-value=94 Score=25.95 Aligned_cols=42 Identities=10% Similarity=0.062 Sum_probs=27.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
.++++|-.|++.| ++..++..+. +.+|+.+|.+++.++....
T Consensus 2 s~k~vlVTGas~G-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 45 (235)
T 3l6e_A 2 SLGHIIVTGAGSG-LGRALTIGLVERGHQVSMMGRRYQRLQQQEL 45 (235)
T ss_dssp -CCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHH
Confidence 3567888887665 3444444332 4589999999887766544
No 462
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=34.01 E-value=48 Score=31.22 Aligned_cols=43 Identities=2% Similarity=-0.198 Sum_probs=33.0
Q ss_pred CcEEEecCCCChhhHHHHhHcC-Cc----eEEEEeCCHHHHHHHHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN-CR----SILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~-~~----~i~g~Dis~~~l~~a~~~~ 106 (290)
.+++|+-||.|.....+.+... .. .|.++|+++.+++.-+.+.
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~ 58 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIH 58 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHc
Confidence 6899999999998887765421 11 2778999999988777654
No 463
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=33.87 E-value=1.2e+02 Score=25.73 Aligned_cols=45 Identities=18% Similarity=0.172 Sum_probs=29.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
..+++||-.|++.| ++..+++.+. +.+|++++.++..++.+...+
T Consensus 10 ~~~k~vlITGas~G-IG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l 56 (311)
T 3o26_A 10 TKRRCAVVTGGNKG-IGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKL 56 (311)
T ss_dssp --CCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCcEEEEecCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 35788998887655 4444444331 458999999998877665544
No 464
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=33.43 E-value=1.9e+02 Score=24.78 Aligned_cols=45 Identities=18% Similarity=0.293 Sum_probs=30.0
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.+...+
T Consensus 31 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~ 77 (275)
T 4imr_A 31 LRGRTALVTGSSRG-IGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRI 77 (275)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHH
Confidence 46889999887665 3344444331 458999999887776665544
No 465
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=33.21 E-value=30 Score=31.92 Aligned_cols=42 Identities=14% Similarity=0.258 Sum_probs=31.9
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++.+|+-+|+|. |..+..++..++. +|+++|.++..++.+..
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga-~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGA-VVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 678999999985 5556666666665 79999999877666543
No 466
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=33.02 E-value=1.5e+02 Score=25.03 Aligned_cols=44 Identities=16% Similarity=0.170 Sum_probs=29.4
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++++|-.|++.| ++..+++.+. +.+|+.++.+++.++.....+
T Consensus 12 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 57 (267)
T 1iy8_A 12 TDRVVLITGGGSG-LGRATAVRLAAEGAKLSLVDVSSEGLEASKAAV 57 (267)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5788998887655 4444444332 458999999988776655443
No 467
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=32.82 E-value=55 Score=29.90 Aligned_cols=42 Identities=14% Similarity=0.174 Sum_probs=29.0
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++++|+-+|+|. |.....++..++. +|+++|.+++.++.+..
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga-~V~~~d~~~~~~~~~~~ 207 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA-QVTILDVNHKRLQYLDD 207 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC-EEEEEECCHHHHHHHHH
Confidence 568999999853 3334444444444 89999999988776643
No 468
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=32.67 E-value=19 Score=29.17 Aligned_cols=41 Identities=17% Similarity=0.215 Sum_probs=29.4
Q ss_pred CCCCceeEEEEchhhhhhhhcCCchHH-HHHHHHHHhhcCCCcEEEE
Q 047406 176 SPEKYYDAILCLSVTKWIHLNWGDDGL-ITLFMRIWKLLRPGGIFVL 221 (290)
Q Consensus 176 ~~~~~fD~I~~~~vl~~~~l~~~~~~~-~~~l~~~~~~LkpgG~l~i 221 (290)
.+...||.|+...--. .....+ +.++..+...|+|||.|..
T Consensus 55 Lp~stYD~V~~lt~~~-----~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 55 LENAKYETVHYLTPEA-----QTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCSSSCCSEEEECCCS-----SCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred CCcccccEEEEecCCc-----cchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 4678999999743321 000122 7999999999999999986
No 469
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=32.66 E-value=54 Score=26.41 Aligned_cols=35 Identities=14% Similarity=0.165 Sum_probs=22.4
Q ss_pred CcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRV 99 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l 99 (290)
++||-.| |+|.++..+++.+. +.+|++++-++..+
T Consensus 1 MkvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (221)
T 3ew7_A 1 MKIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKI 37 (221)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHH
T ss_pred CeEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhh
Confidence 3577777 45655555555432 46899999887543
No 470
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=32.64 E-value=1.5e+02 Score=24.82 Aligned_cols=38 Identities=16% Similarity=0.252 Sum_probs=23.1
Q ss_pred cEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHH
Q 047406 65 DCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAY 103 (290)
Q Consensus 65 ~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~ 103 (290)
++|-.|++.| ++..+++.+. +.+|+.++.+++.++...
T Consensus 2 ~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~ 41 (248)
T 3asu_A 2 IVLVTGATAG-FGECITRRFIQQGHKVIATGRRQERLQELK 41 (248)
T ss_dssp EEEETTTTST-THHHHHHHHHHTTCEEEEEESCHHHHHHHH
T ss_pred EEEEECCCCh-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 4666776555 3344443331 468999999987665543
No 471
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=32.63 E-value=86 Score=27.09 Aligned_cols=42 Identities=26% Similarity=0.394 Sum_probs=29.2
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
..++++|-.|++.|+ ++..+++. ..+|+.+|.+++.++.+..
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~--G~~V~~~~r~~~~~~~~~~ 71 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADE--GCHVLCADIDGDAADAAAT 71 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 467899999987763 34444443 4589999999877665544
No 472
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=32.46 E-value=91 Score=26.33 Aligned_cols=42 Identities=31% Similarity=0.354 Sum_probs=28.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
.++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++....
T Consensus 7 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~ 50 (259)
T 4e6p_A 7 EGKSALITGSARG-IGRAFAEAYVREGATVAIADIDIERARQAAA 50 (259)
T ss_dssp TTCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 5788998886655 4444444332 4589999999877665544
No 473
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=32.27 E-value=79 Score=26.36 Aligned_cols=43 Identities=21% Similarity=0.258 Sum_probs=29.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
.++++||-.|++.| ++..++..+. +.+|+.++.+++.++....
T Consensus 12 ~~~k~vlVTGas~g-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~ 56 (249)
T 3f9i_A 12 LTGKTSLITGASSG-IGSAIARLLHKLGSKVIISGSNEEKLKSLGN 56 (249)
T ss_dssp CTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 57789999987665 3444444332 4689999999887665544
No 474
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=32.17 E-value=1.2e+02 Score=24.37 Aligned_cols=35 Identities=14% Similarity=0.199 Sum_probs=23.3
Q ss_pred CcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHH
Q 047406 64 KDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRV 99 (290)
Q Consensus 64 ~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l 99 (290)
++||-.| |+|.++..++..+. +.+|++++-++..+
T Consensus 1 MkilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~ 37 (224)
T 3h2s_A 1 MKIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKA 37 (224)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred CEEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 3577777 45666666655442 45899999987654
No 475
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=32.11 E-value=84 Score=26.59 Aligned_cols=44 Identities=16% Similarity=0.233 Sum_probs=29.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~ 105 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.+...
T Consensus 4 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~ 49 (257)
T 3imf_A 4 MKEKVVIITGGSSG-MGKGMATRFAKEGARVVITGRTKEKLEEAKLE 49 (257)
T ss_dssp TTTCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 35788998887655 4444444331 45899999999887766553
No 476
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=31.74 E-value=37 Score=31.94 Aligned_cols=42 Identities=14% Similarity=0.292 Sum_probs=32.7
Q ss_pred CCCcEEEecCCC-ChhhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 62 EGKDCLDIGCNS-GIITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 62 ~~~~vLDiGcG~-G~~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++.+|+-+|+|. |..+..++..++. +|+++|.++..++.+..
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa-~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA-KTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHH
Confidence 668999999985 5566666666654 89999999988777755
No 477
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=31.67 E-value=1e+02 Score=25.92 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=28.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++....
T Consensus 7 l~gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 51 (248)
T 3op4_A 7 LEGKVALVTGASRG-IGKAIAELLAERGAKVIGTATSESGAQAISD 51 (248)
T ss_dssp CTTCEEEESSCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 35788998887665 3444444332 4689999999877665544
No 478
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=31.48 E-value=1.7e+02 Score=24.80 Aligned_cols=45 Identities=18% Similarity=0.138 Sum_probs=29.9
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
..++++|-.|++. .++..++..+. +.+|+++|.++..++.....+
T Consensus 29 l~~k~vlITGasg-gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l 75 (272)
T 1yb1_A 29 VTGEIVLITGAGH-GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKC 75 (272)
T ss_dssp CTTCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCc-hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHH
Confidence 3578899888654 45555554432 458999999987776555443
No 479
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=31.08 E-value=1.8e+02 Score=24.05 Aligned_cols=44 Identities=14% Similarity=0.152 Sum_probs=28.9
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++++|-.|++ |.++..+++.+. ..+|+++|.++..++.....+
T Consensus 12 ~~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l 57 (260)
T 3awd_A 12 DNRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDL 57 (260)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 57889988865 445555554432 458999999987765554433
No 480
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=30.63 E-value=1e+02 Score=26.51 Aligned_cols=46 Identities=26% Similarity=0.367 Sum_probs=31.1
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++.....+.
T Consensus 24 l~gk~~lVTGas~g-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~ 71 (271)
T 4ibo_A 24 LGGRTALVTGSSRG-LGRAMAEGLAVAGARILINGTDPSRVAQTVQEFR 71 (271)
T ss_dssp CTTCEEEETTCSSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46788999886655 4444444332 4589999999988777665543
No 481
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=30.55 E-value=32 Score=31.14 Aligned_cols=35 Identities=17% Similarity=0.184 Sum_probs=25.9
Q ss_pred CCCcEEEecCCCChhhHH--HHhHcCCceEEEEeCCH
Q 047406 62 EGKDCLDIGCNSGIITIQ--IAQKFNCRSILGIDIDS 96 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~--la~~~~~~~i~g~Dis~ 96 (290)
.|++|+-||.|.|.++.. |++..+..+|+.+|-++
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~ 37 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNE 37 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCC
Confidence 378999999999865544 55555566899999764
No 482
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=30.50 E-value=36 Score=26.64 Aligned_cols=39 Identities=18% Similarity=0.197 Sum_probs=25.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHc--CCceEEEEeCCHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKF--NCRSILGIDIDSNRVAD 101 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~--~~~~i~g~Dis~~~l~~ 101 (290)
.++.+|+-+||| .++..+++.. .+..|+++|.+++.++.
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 567899999875 4444444332 23589999998865443
No 483
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=30.40 E-value=1.2e+02 Score=26.23 Aligned_cols=43 Identities=16% Similarity=0.093 Sum_probs=29.2
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~ 105 (290)
.++++|-.|++.| ++..+++.+. +.+|+.+|.+++.++.....
T Consensus 27 ~~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 71 (283)
T 3v8b_A 27 PSPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADE 71 (283)
T ss_dssp CCCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5788998887665 3444444332 45899999998877666554
No 484
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=30.34 E-value=1.3e+02 Score=25.35 Aligned_cols=42 Identities=19% Similarity=0.139 Sum_probs=26.3
Q ss_pred CCcEEEecCCCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHH
Q 047406 63 GKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 63 ~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~ 104 (290)
++++|-.|++.|+ ++..+++......|+.++.+++.++....
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~ 46 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKE 46 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHH
Confidence 4678888866552 33333443224688999999877665544
No 485
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=30.28 E-value=1e+02 Score=26.55 Aligned_cols=46 Identities=17% Similarity=0.215 Sum_probs=30.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..+++.+. ..+|+.++.+++.++.....+.
T Consensus 30 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~ 77 (276)
T 3r1i_A 30 LSGKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIA 77 (276)
T ss_dssp CTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH
Confidence 46889999997765 3334443331 4589999999877766655443
No 486
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=30.27 E-value=85 Score=26.42 Aligned_cols=43 Identities=26% Similarity=0.352 Sum_probs=28.6
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++....
T Consensus 4 l~gk~vlVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~ 48 (247)
T 3rwb_A 4 LAGKTALVTGAAQG-IGKAIAARLAADGATVIVSDINAEGAKAAAA 48 (247)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred cCCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 36788999997665 3333443331 4589999999877665544
No 487
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=30.26 E-value=1.9e+02 Score=24.15 Aligned_cols=44 Identities=20% Similarity=0.151 Sum_probs=29.3
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++++|-.|++.| ++..+++.+. +.+|+.++.+++.++.....+
T Consensus 6 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l 51 (247)
T 2jah_A 6 QGKVALITGASSG-IGEATARALAAEGAAVAIAARRVEKLRALGDEL 51 (247)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 5688998886655 4444444332 458999999988776655443
No 488
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=30.19 E-value=1.8e+02 Score=24.83 Aligned_cols=44 Identities=18% Similarity=0.272 Sum_probs=29.1
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++++|-.|++.| ++..+++.+. ..+|++++.+++.++.....+
T Consensus 21 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l 66 (277)
T 2rhc_B 21 DSEVALVTGATSG-IGLEIARRLGKEGLRVFVCARGEEGLRTTLKEL 66 (277)
T ss_dssp TSCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5788999987654 4444444332 458999999987776554443
No 489
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=30.09 E-value=78 Score=30.77 Aligned_cols=37 Identities=14% Similarity=0.130 Sum_probs=29.5
Q ss_pred CceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcEEEEeeC
Q 047406 179 KYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGIFVLEPQ 224 (290)
Q Consensus 179 ~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 224 (290)
..-|+|+.+ .+++.+..+++.+..+|+||-.|.++++
T Consensus 97 ~~ADvV~~L---------~PD~~q~~vy~~I~p~lk~G~~L~faHG 133 (491)
T 3ulk_A 97 PQADLVINL---------TPDKQHSDVVRTVQPLMKDGAALGYSHG 133 (491)
T ss_dssp GGCSEEEEC---------SCGGGHHHHHHHHGGGSCTTCEEEESSC
T ss_pred HhCCEEEEe---------CChhhHHHHHHHHHhhCCCCCEEEecCc
Confidence 456888852 1356778889999999999999999876
No 490
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=29.28 E-value=2.5e+02 Score=23.43 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=28.4
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~ 105 (290)
.++++|-.|++.| ++..+++.+. ..+|++++.+++.++.....
T Consensus 8 ~~k~vlVTGas~g-iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 52 (260)
T 2ae2_A 8 EGCTALVTGGSRG-IGYGIVEELASLGASVYTCSRNQKELNDCLTQ 52 (260)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5788998886554 4444444332 45899999998776655443
No 491
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=28.97 E-value=2e+02 Score=24.43 Aligned_cols=44 Identities=14% Similarity=0.222 Sum_probs=29.2
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++++|-.|++.| ++..+++.+. ..+|++++.+++.++.....+
T Consensus 20 ~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 65 (273)
T 1ae1_A 20 KGTTALVTGGSKG-IGYAIVEELAGLGARVYTCSRNEKELDECLEIW 65 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEECCcch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5788998886554 4444444332 458999999988776554433
No 492
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=28.93 E-value=1.1e+02 Score=26.37 Aligned_cols=43 Identities=19% Similarity=0.288 Sum_probs=28.5
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYW 104 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~ 104 (290)
..++++|-.|++.| ++..+++.+. ..+|+.+|.+++.++....
T Consensus 25 l~~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~ 69 (277)
T 4dqx_A 25 LNQRVCIVTGGGSG-IGRATAELFAKNGAYVVVADVNEDAAVRVAN 69 (277)
T ss_dssp TTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 36788999987665 3344444331 4589999999877665443
No 493
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=28.78 E-value=1.6e+02 Score=24.74 Aligned_cols=44 Identities=16% Similarity=0.183 Sum_probs=29.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~ 106 (290)
.++++|-.|++.| ++..+++.+. ..+|+.++.+++.++.....+
T Consensus 4 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~ 49 (260)
T 2qq5_A 4 NGQVCVVTGASRG-IGRGIALQLCKAGATVYITGRHLDTLRVVAQEA 49 (260)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH
Confidence 5678888886655 4444444432 458999999988776655443
No 494
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=28.50 E-value=2.6e+02 Score=23.33 Aligned_cols=44 Identities=18% Similarity=0.234 Sum_probs=30.6
Q ss_pred cCCCcEEEecC-CCCh---hhHHHHhHcCCceEEEEeCCHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGC-NSGI---ITIQIAQKFNCRSILGIDIDSNRVADAYWHL 106 (290)
Q Consensus 61 ~~~~~vLDiGc-G~G~---~~~~la~~~~~~~i~g~Dis~~~l~~a~~~~ 106 (290)
..++++|-.|+ |+|+ ++..+++. ..+|+.+|.++..++.....+
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~--G~~V~~~~r~~~~~~~~~~~l 67 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLE--GADVVISDYHERRLGETRDQL 67 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHC--CCEEEEecCCHHHHHHHHHHH
Confidence 36788999997 5663 44444443 458999999988877666544
No 495
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=28.40 E-value=1.7e+02 Score=25.17 Aligned_cols=46 Identities=22% Similarity=0.176 Sum_probs=29.7
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHHHH
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWHLR 107 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~~~ 107 (290)
..++++|-.|++.| ++..+++.+. +.+|+.+|.+++.++.+...+.
T Consensus 31 l~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~ 78 (281)
T 4dry_A 31 GEGRIALVTGGGTG-VGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIG 78 (281)
T ss_dssp ---CEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
Confidence 36788998887655 4444444432 4589999999988777666543
No 496
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=28.38 E-value=44 Score=36.07 Aligned_cols=55 Identities=9% Similarity=0.051 Sum_probs=35.4
Q ss_pred eeEeecccccCCCCCCCceeEEEEchhhhhhhhcCCchHHHHHHHHHHhhcCCCcE
Q 047406 163 VSFKQENFVHGRDSPEKYYDAILCLSVTKWIHLNWGDDGLITLFMRIWKLLRPGGI 218 (290)
Q Consensus 163 i~~~~~d~~~~~~~~~~~fD~I~~~~vl~~~~l~~~~~~~~~~l~~~~~~LkpgG~ 218 (290)
-.|.+.|+...----..++|.+.|...|- -......-++...+.++.+..++.|+
T Consensus 872 T~yi~~DYl~~~~~~~~~~d~vtailSLG-AA~a~a~~tl~~~l~~~l~~~~~~~v 926 (1299)
T 3iyl_W 872 TAYVQGDYSTAAFWNGIRCDSATAIFTIG-AAAAAAGTDLIAFVQQLIPRIVAAGG 926 (1299)
T ss_dssp EEEEESCSSSGGGGSSCCCSEEEETTTHH-HHHHHTTCCHHHHHHHHHHHHHHTTC
T ss_pred ceeEEeccccceeEecCCCCEEEEeeech-hhhhhCCCcHHHHHHHHHHHHHhcCc
Confidence 78999999874222347899999987763 11112233456777777777776654
No 497
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=27.95 E-value=2.1e+02 Score=24.28 Aligned_cols=32 Identities=25% Similarity=0.494 Sum_probs=21.6
Q ss_pred cCCCcEEEecCCCCh---hhHHHHhHcCCceEEEEeC
Q 047406 61 FEGKDCLDIGCNSGI---ITIQIAQKFNCRSILGIDI 94 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~---~~~~la~~~~~~~i~g~Di 94 (290)
..++++|-.|++.|+ ++..+++. ..+|+.+|.
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~--G~~V~~~~r 43 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAE--GADIIAVDI 43 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEec
Confidence 367889999977663 33334433 458999998
No 498
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=27.85 E-value=1.8e+02 Score=24.47 Aligned_cols=43 Identities=23% Similarity=0.358 Sum_probs=28.6
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~ 105 (290)
.++++|-.|++.| ++..+++.+. ..+|+.++.+++.++.....
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~ 50 (262)
T 1zem_A 6 NGKVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEAS 50 (262)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH
Confidence 5788998887655 4444444332 45899999998776655443
No 499
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=27.33 E-value=90 Score=27.03 Aligned_cols=43 Identities=26% Similarity=0.248 Sum_probs=29.0
Q ss_pred CCCcEEEecCCCChhhHHHHhHcC--CceEEEEeCCHHHHHHHHHH
Q 047406 62 EGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDIDSNRVADAYWH 105 (290)
Q Consensus 62 ~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Dis~~~l~~a~~~ 105 (290)
.++++|-.|++.| ++..+++.+. +.+|+.+|.+++.++.....
T Consensus 7 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~ 51 (280)
T 3tox_A 7 EGKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDE 51 (280)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
Confidence 5788998887765 3333343331 45899999998877666553
No 500
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=27.14 E-value=1.8e+02 Score=24.70 Aligned_cols=33 Identities=21% Similarity=0.326 Sum_probs=21.8
Q ss_pred cCCCcEEEecCCCChhhHHHHhHcC--CceEEEEeC
Q 047406 61 FEGKDCLDIGCNSGIITIQIAQKFN--CRSILGIDI 94 (290)
Q Consensus 61 ~~~~~vLDiGcG~G~~~~~la~~~~--~~~i~g~Di 94 (290)
..++++|-.|++.| ++..+++.+. ..+|+++|.
T Consensus 13 l~gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r 47 (280)
T 3pgx_A 13 LQGRVAFITGAARG-QGRSHAVRLAAEGADIIACDI 47 (280)
T ss_dssp TTTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEec
Confidence 36788999987766 3333343331 458999998
Done!