Query 047407
Match_columns 294
No_of_seqs 170 out of 1292
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 19:00:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047407.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047407hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jg0_A Periplasmic trehalase; 100.0 1.8E-57 6.3E-62 438.3 26.2 266 1-287 173-506 (535)
2 2z07_A Putative uncharacterize 100.0 8.1E-45 2.8E-49 342.0 18.1 241 1-280 99-419 (420)
3 3c68_A Uncharacterized protein 100.0 5.6E-41 1.9E-45 334.8 22.7 259 2-286 389-760 (761)
4 2okx_A Rhamnosidase B; alpha b 99.9 4.9E-21 1.7E-25 196.4 22.8 236 4-283 628-876 (956)
5 3cih_A Putative alpha-rhamnosi 99.9 2.1E-20 7E-25 187.1 22.5 231 6-282 386-635 (739)
6 1v7w_A Chitobiose phosphorylas 99.7 7.5E-17 2.6E-21 162.9 11.8 208 4-232 426-670 (807)
7 3qde_A Cellobiose phosphorylas 99.6 6.7E-14 2.3E-18 140.8 16.6 206 8-233 419-680 (811)
8 3rrs_A Cellobiose phosphorylas 99.5 1.5E-13 5E-18 138.4 18.0 208 8-235 426-695 (822)
9 2p0v_A Hypothetical protein BT 99.3 2.8E-11 9.4E-16 113.0 15.3 241 9-283 185-468 (489)
10 1lf6_A Glucoamylase; (alpha/al 99.2 2.6E-10 8.9E-15 113.0 16.0 191 77-283 454-666 (684)
11 1ulv_A Glucodextranase; GH fam 99.1 2E-09 6.9E-14 110.4 17.4 252 5-283 387-667 (1020)
12 3p2c_A Putative glycosyl hydro 98.9 4E-08 1.4E-12 91.1 17.5 240 9-283 168-450 (463)
13 2vn4_A Glucoamylase; hydrolase 98.9 3.8E-08 1.3E-12 95.7 17.7 230 17-283 142-433 (599)
14 2fba_A Glucoamylase Glu1; (alp 98.9 1.7E-08 5.8E-13 96.0 14.8 244 5-282 146-484 (492)
15 1gai_A Glucoamylase-471; hydro 98.9 1.6E-07 5.3E-12 88.7 18.7 224 17-283 141-428 (472)
16 3qt9_A Putative uncharacterize 98.7 3.1E-07 1.1E-11 84.4 15.7 240 9-283 140-422 (427)
17 3qry_B Putative uncharacterize 98.6 8.4E-07 2.9E-11 81.5 15.7 239 9-282 139-421 (426)
18 2rdy_A BH0842 protein; PSI-II, 95.7 0.041 1.4E-06 55.3 10.1 93 8-105 452-561 (803)
19 3gt5_A N-acetylglucosamine 2-e 95.2 0.22 7.4E-06 45.6 12.3 85 22-121 7-97 (402)
20 2eab_A Alpha-fucosidase; glyco 94.9 0.051 1.7E-06 55.1 7.6 35 8-42 510-544 (899)
21 3k7x_A LIN0763 protein; Q92DQ0 91.3 0.49 1.7E-05 42.5 7.4 100 8-125 96-198 (349)
22 1fp3_A N-acyl-D-glucosamine 2- 90.0 1.9 6.6E-05 39.0 10.4 103 9-127 252-365 (402)
23 2gz6_A N-acetyl-D-glucosamine 88.5 5.7 0.0002 35.5 12.3 103 9-127 243-355 (388)
24 1h54_A Maltose phosphorylase; 88.3 0.77 2.6E-05 45.7 6.7 35 9-43 432-467 (754)
25 2gz6_A N-acetyl-D-glucosamine 87.7 1 3.5E-05 40.5 6.7 98 9-122 120-218 (388)
26 3gt5_A N-acetylglucosamine 2-e 87.4 3.7 0.00013 37.3 10.3 110 9-124 178-296 (402)
27 2ww2_A Mannosidase, alpha-1,2- 80.8 0.57 1.9E-05 46.4 1.8 43 78-125 455-497 (737)
28 2zbl_A Putative isomerase; N-a 80.3 9.1 0.00031 34.9 9.7 103 10-127 253-367 (421)
29 2zbl_A Putative isomerase; N-a 80.2 2.8 9.5E-05 38.4 6.2 47 78-124 253-303 (421)
30 2wvx_A Mannosidase, putative a 79.0 0.92 3.2E-05 44.9 2.6 43 78-125 452-495 (744)
31 1nc5_A Hypothetical protein YT 78.6 6.7 0.00023 35.2 8.2 93 10-122 93-189 (373)
32 2xsg_A Ccman5; hydrolase, mann 75.9 1.7 5.7E-05 43.2 3.4 42 78-124 465-516 (774)
33 2zzr_A Unsaturated glucuronyl 74.6 16 0.00055 33.2 9.5 91 9-114 251-348 (397)
34 3qxf_A Endoglucanase; cellulas 74.3 19 0.00063 32.3 9.6 37 78-118 101-137 (355)
35 2ahf_A Unsaturated glucuronyl 69.7 22 0.00074 32.1 9.1 93 8-115 225-324 (377)
36 3k11_A Putative glycosyl hydro 64.8 18 0.00063 33.4 7.7 97 9-123 150-251 (445)
37 3k11_A Putative glycosyl hydro 62.6 39 0.0013 31.2 9.4 42 77-122 150-191 (445)
38 2ahf_A Unsaturated glucuronyl 59.6 41 0.0014 30.2 8.9 99 13-126 157-270 (377)
39 2zzr_A Unsaturated glucuronyl 58.4 50 0.0017 29.9 9.3 99 13-126 182-295 (397)
40 3pmm_A Putative cytoplasmic pr 58.4 17 0.00057 32.8 6.1 94 12-122 118-216 (382)
41 3pmm_A Putative cytoplasmic pr 56.3 61 0.0021 29.0 9.5 85 8-122 72-156 (382)
42 3k7x_A LIN0763 protein; Q92DQ0 54.7 1.1E+02 0.0038 26.9 11.5 96 9-122 155-257 (349)
43 1fp3_A N-acyl-D-glucosamine 2- 40.9 1.4E+02 0.0046 26.5 9.3 40 81-124 65-109 (402)
44 2vh3_A Ranasmurfin, RSF-1; LTQ 30.9 78 0.0027 21.7 4.4 32 79-110 31-62 (113)
45 3h7l_A Endoglucanase; dehydrog 26.6 3.9E+02 0.013 25.4 10.1 103 3-111 161-290 (586)
46 3h7l_A Endoglucanase; dehydrog 24.2 2.1E+02 0.0072 27.3 7.7 23 9-31 308-330 (586)
47 1nc5_A Hypothetical protein YT 23.2 3.8E+02 0.013 23.4 11.1 101 11-122 150-263 (373)
48 1efd_N Ferrichrome-binding per 22.0 1.5E+02 0.005 24.3 5.7 41 72-112 99-139 (266)
49 1gai_A Glucoamylase-471; hydro 21.2 1.9E+02 0.0064 26.8 6.6 81 166-252 15-111 (472)
50 2v8i_A Pectate lyase; periplas 20.8 5.1E+02 0.017 24.1 17.0 159 77-247 300-470 (543)
51 3lhs_A Ferrichrome ABC transpo 20.6 1.7E+02 0.0057 24.4 5.9 41 72-112 117-157 (296)
No 1
>2jg0_A Periplasmic trehalase; family 37, hydrolase, inhibitor, glycoside hydrolase, glycosidase, 1-thiatrehazolin; HET: TTZ; 1.50A {Escherichia coli} SCOP: a.102.1.9 PDB: 2jf4_A* 2jjb_A* 2wyn_A*
Probab=100.00 E-value=1.8e-57 Score=438.30 Aligned_cols=266 Identities=33% Similarity=0.603 Sum_probs=236.6
Q ss_pred CCCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCcc--------ccccCCCCeeeceeeecCCCCCCCC
Q 047407 1 MSCSQPPLLSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKV--------NIQEDHGRNHTLSRYYGMWNKLRPE 72 (294)
Q Consensus 1 ~~rsqPP~~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~--------~~~~~~G~~~~l~~y~~~~~~prpe 72 (294)
++|||||+|++||+.||+.++| +||+++||+|+++|+||++.++.. .+..++|. +|++|++..+.||||
T Consensus 173 ~~~sqPPl~~~~v~~~~~~~~~-~fL~~~~p~L~~~~~ww~~~~~~~~~g~~~~~~~~~~~G~--~l~~y~~~~~~prpe 249 (535)
T 2jg0_A 173 LSRSQPPFFALMVELLAQHEGD-AALKQYLPQMQKEYAYWMDGVENLQAGQQEKRVVKLQDGT--LLNRYWDDRDTPRPE 249 (535)
T ss_dssp TTCCCSCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHTTTCTTCCTTEEETTEEECTTSC--EEECCCCSCCSCCGG
T ss_pred CCCCCccHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHhCCcccCccccccceeecCCCC--cceeeccCCCCCCCc
Confidence 4799999999999999999875 999999999999999999998631 01123443 689999888888887
Q ss_pred cHHH------------------------------------------------------------HHHHHHHHHHHhCCch
Q 047407 73 SSTI------------------------------------------------------------MELDIASMAQIVGDNR 92 (294)
Q Consensus 73 s~~~------------------------------------------------------------~~~~lA~la~~lG~~~ 92 (294)
+|++ +++.||+||+++|+.+
T Consensus 250 syr~d~~~~~~~~~~~~~~~y~~~~~~~eSGwD~s~R~~~~~~~l~~~~t~~i~~VDlnA~ly~a~~~la~lA~~lG~~~ 329 (535)
T 2jg0_A 250 SWVEDIATAKSNPNRPATEIYRDLRSAAASGWDFSSRWMDNPQQLNTLRTTSIVPVDLNSLMFKMEKILARASKAAGDNA 329 (535)
T ss_dssp GHHHHHHHHHTCTTSCHHHHHHHHHHHHHTTCCSCGGGBSSTTCGGGBCGGGEECHHHHHHHHHHHHHHHHHHHHHTCHH
T ss_pred ceeehhhhhhccccchhHHHHHHHHHHHhCCCCCccccCCCCCcccccCCccchhhHHHHHHHHHHHHHHHHHHHhCChH
Confidence 7621 4567899999999999
Q ss_pred hHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhhccCCCCccceehhhhHHHhccCCCCchHHHHHHHHH
Q 047407 93 TAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQRWKGSNQSNNAFTSNFVPIWIDLFNSNTCIVEKVKKS 172 (294)
Q Consensus 93 ~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~PL~~g~~~~~~~~~~~~~~~ 172 (294)
++++|+++|++++++|++.|||+++|+|+|+++.+ ++++++++.++++|||+|++++++ ++++++.
T Consensus 330 ~a~~~~~~A~~lk~ai~~~fWdee~G~y~D~~~~~------------~~~~~~~~~s~~~PL~~gi~~~e~--a~~v~~~ 395 (535)
T 2jg0_A 330 MANQYETLANARQKGIEKYLWNDQQGWYADYDLKS------------HKVRNQLTAAALFPLYVNAAAKDR--ANKMATA 395 (535)
T ss_dssp HHHHHHHHHHHHHHHHHHHSEETTTTEECCEETTT------------TEECCCCBGGGGHHHHTTCSCHHH--HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCcCCCCCEEEEEeCCC------------CCEeeeehhhhHHHHhcCCCCHHH--HHHHHHH
Confidence 99999999999999999999999999999999875 456778899999999999999774 5889998
Q ss_pred hhhcCcccccccccccCCCCCCCCCCCCCchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccc
Q 047407 173 FQSSGFLGAAGIATSLTRSREQWDFPNGWAPLQHMIVEGLAKSGLQEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVE 252 (294)
Q Consensus 173 l~~~~~~~~~Gi~ts~~~~~~~W~gPnvW~~~~~l~~~gL~~yg~~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~ 252 (294)
|.+ .+++++||+|+.+++++||||||||||+|+|+++||++||+. ++|.+|+++|+.++.+.|.++|.|+|+||+.
T Consensus 396 l~~-~l~t~~GlrT~s~~s~~yW~GpNvW~~~~~l~i~gL~~yG~~---~~A~~la~~~l~~~~~~~~~~G~l~E~yd~~ 471 (535)
T 2jg0_A 396 TKT-HLLQPGGLNTTSVKSGQQWDAPNGWAPLQWVATEGLQNYGQK---EVAMDISWHFLTNVQHTYDREKKLVEKYDVS 471 (535)
T ss_dssp HHH-HTEETTEECSBSCCCSSSSSTTEECHHHHHHHHHHHHTTTCH---HHHHHHHHHHHHHHHHHHHHHSSCBSCEETT
T ss_pred HHH-HhccCCCCCCCcCCCccccCCCCcchhHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHHHHhccCCeeeeeECCC
Confidence 874 677999999988899999999999999999999999999998 5999999999999999999999999999999
Q ss_pred cCCccCCCccccCCCCccccHHHHHHHHHHhCCCC
Q 047407 253 KCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWPE 287 (294)
Q Consensus 253 ~~~~~g~gGey~~~~~fgWT~~v~L~~~~~~~~~~ 287 (294)
+++..|+||||++|.+|||||||+|+|+.+||..+
T Consensus 472 ~~~~~G~ggeY~~~~~fgWT~av~l~ll~~y~~~~ 506 (535)
T 2jg0_A 472 TTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPKE 506 (535)
T ss_dssp SSSCBCCCSSSCCCBSCHHHHHHHHHHHHHHSCSS
T ss_pred CCCCCCCCCCCCCCCCChhHHHHHHHHHHHhhhhc
Confidence 87777788999999999999999999999999843
No 2
>2z07_A Putative uncharacterized protein TTHA0978; uncharacterized conserved protein, structural genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=8.1e-45 Score=341.99 Aligned_cols=241 Identities=15% Similarity=0.282 Sum_probs=191.7
Q ss_pred CCCCCcchHHHHHHHHHHHcCC----HHHHHHHHHHHHHHHHHHhhCCCccccccCCCCee-------e--ceeeecC--
Q 047407 1 MSCSQPPLLSAMVYDIYNRTGD----LDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNH-------T--LSRYYGM-- 65 (294)
Q Consensus 1 ~~rsqPP~~~~~v~~~y~~t~D----~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~-------~--l~~y~~~-- 65 (294)
++|||||++++|++.||+.|+| .+||+++||.|+++++||++.++. +.+|... + ++.+|++
T Consensus 99 ~~~~qpP~~~~~~~~~~~~tgD~~~~~~~L~~~~p~l~~~~~~~~~~~d~----~~~Gl~~~~~~we~G~~~~~~w~~~~ 174 (420)
T 2z07_A 99 SGITQPPVVATVVRYLYEKDPDRDRARERARYLFPKLLAFHRWLYHARDP----YRTGLVVIVHPWESGMDNSPAWDKPL 174 (420)
T ss_dssp CSSCCCCCHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHHHHHHHHHCT----TCCSCCCBSSGGGGTCTTCGGGHHHH
T ss_pred CCCcCCcHHHHHHHHHHHhCccchhHHHHHHHHHHHHHHHHHHHhcCCCC----CCCCceeeecCCCcCCCCCccccccc
Confidence 3699999999999999999999 999999999999999999988752 3344311 1 1222322
Q ss_pred --CCCCCCCcH-------------------------------------------------------H-HHHHHHHHHHHH
Q 047407 66 --WNKLRPESS-------------------------------------------------------T-IMELDIASMAQI 87 (294)
Q Consensus 66 --~~~prpes~-------------------------------------------------------~-~~~~~lA~la~~ 87 (294)
...|++++| . .+++.||+||++
T Consensus 175 ~~~~~~~~~~y~r~d~~~~~~~~~p~~~~~~~~~~~~~~~~esG~d~s~l~~~~~~~~~~vdlna~~~~~~~~la~la~~ 254 (420)
T 2z07_A 175 SRVPVENLPPYERRDVKHVNPEERPRKEDYDRYLSLLYLFRRLEYDPREIYRQSPFKVVDVGFNAILQRANRDLYALAVL 254 (420)
T ss_dssp HTCCC-----------CCSCC-------CHHHHHHHHHHHHHTTTCHHHHHHHCSCCEECHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCcchhhhhhhhccccccCCcHHHHHHHHHHHHHHHHcCCChhhhcccCCcccCChhHHHHHHHHHHHHHHHHHH
Confidence 122333322 0 045789999999
Q ss_pred hCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhhccCCCCccceehhhhHHHhccCCCCchHHHH
Q 047407 88 VGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQRWKGSNQSNNAFTSNFVPIWIDLFNSNTCIVE 167 (294)
Q Consensus 88 lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~PL~~g~~~~~~~~~~ 167 (294)
||+. +++|+++|++++++|++ |||+++|+|+|+++.+ ++++++.+.++++||++|++++++ ++
T Consensus 255 lg~~--a~~~~~~a~~~~~ai~~-~Wd~~~g~~~d~~~~~------------g~~~~~~~~~~~~pL~~g~~~~~~--a~ 317 (420)
T 2z07_A 255 LQED--PYEIEEWIVRGEVGLEA-LWDREAGFYFSWDLVA------------GEPIAVKTSAGFLPLFAGTPHQGR--AS 317 (420)
T ss_dssp TTCC--CHHHHHHHHHHHHHHHH-TEETTTTEECCEETTT------------TEECCCCBGGGGTHHHHTCSCHHH--HH
T ss_pred hCcc--HHHHHHHHHHHHHHHHH-hhCcccCeeEeeeCCC------------CCeeccccHHhHHHHHcCCCCHHH--HH
Confidence 9986 78999999999999999 9999999999999864 455667789999999999999875 47
Q ss_pred HHHHHhhhcCcc--cccccccc-----cCCCCCCCCCCCCCchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Q 047407 168 KVKKSFQSSGFL--GAAGIATS-----LTRSREQWDFPNGWAPLQHMIVEGLAKSGLQEAKSMAQDIAMRWINTNYVAYK 240 (294)
Q Consensus 168 ~~~~~l~~~~~~--~~~Gi~ts-----~~~~~~~W~gPnvW~~~~~l~~~gL~~yg~~~~~~~A~~la~~~~~~~~~~~~ 240 (294)
++++.|. .++ +++||+|. .+++++||||| ||||+|+++++||++||+. ++|++|+++|+.++.
T Consensus 318 ~v~~~l~--~~~~~~~~gi~t~~~~~~~y~~~~yw~gp-vW~~~~~~~~~gL~~~G~~---~~A~~l~~~~~~~~~---- 387 (420)
T 2z07_A 318 LLAQEAE--RWGEKARYLLPSVDPTSPFFEPGRYWRGP-VWINVNWMVAEGFRDYGFA---ALAARLKADALALME---- 387 (420)
T ss_dssp HHHHHHH--HHTTTCSSSCBSBCTTSTTCCTTSTTSSC-BCHHHHHHHHHHHHHTTCH---HHHHHHHHHHHHHHH----
T ss_pred HHHHHHH--HHhccCCCCcCcCCCcCcccCCcCCCCCC-cchhHHHHHHHHHHHcCCH---HHHHHHHHHHHHHHh----
Confidence 7888775 455 78899873 36788999999 9999999999999999998 589999999998764
Q ss_pred hcCccceeeccccCCccCCCccccCCCCccccHHHHHHHH
Q 047407 241 ETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFL 280 (294)
Q Consensus 241 ~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~ 280 (294)
+|.|+|+||+.++. +.|+ .+|||||||+|.|+
T Consensus 388 -~~~~~E~yd~~~g~--~~g~-----~~fgWs~~~~l~ll 419 (420)
T 2z07_A 388 -REGFREYYDPLTGQ--GRGG-----EGFSWSAALALFWT 419 (420)
T ss_dssp -HHCSEEEECTTTCC--EEEE-----ESCHHHHHHHHHHT
T ss_pred -cCCeeeeeCCCCCC--cCCC-----CCCchHHHHHHHHh
Confidence 36699999999753 2222 57999999999986
No 3
>3c68_A Uncharacterized protein YGJK; GH63, processing alpha-glucosidase, alpha/alpha barrel, hydrolase; HET: BMA; 1.50A {Escherichia coli} PDB: 3c67_A* 2ds3_A* 3c69_A* 3d3i_A
Probab=100.00 E-value=5.6e-41 Score=334.78 Aligned_cols=259 Identities=18% Similarity=0.281 Sum_probs=203.0
Q ss_pred CCCCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeec-----------------
Q 047407 2 SCSQPPLLSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYG----------------- 64 (294)
Q Consensus 2 ~rsqPP~~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~----------------- 64 (294)
++||||+|++||+.||+.|+|.+||+++||.|+++++||+++++. +.+|. .+|..
T Consensus 389 ~~sqPPl~~~av~~yy~~tgD~~fL~e~~P~L~~~~~w~~~~rd~----d~~GL----~~y~~~~~~~~~~prge~~~~d 460 (761)
T 3c68_A 389 RNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDH----NGNGV----PEYGATRDKAHNTESGEMLFTV 460 (761)
T ss_dssp SCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHSCT----TCSSC----CCCEEECCTTTBCTTSCBEEEE
T ss_pred CCCCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCCC----CcCcc----EEecccccccccCCCcchhccc
Confidence 589999999999999999999999999999999999999998763 23332 22110
Q ss_pred ----------------------------------------CCCCCC--------------------------------CC
Q 047407 65 ----------------------------------------MWNKLR--------------------------------PE 72 (294)
Q Consensus 65 ----------------------------------------~~~~pr--------------------------------pe 72 (294)
.+.+|| ..
T Consensus 461 ~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~a~weSG~D~s~rw~~~~~~~~~~y~~~~~~~~~w~~~~~~n~~~~G 540 (761)
T 3c68_A 461 KKGDKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVANGGKRSDWTVKFAENRSQDG 540 (761)
T ss_dssp EETTEEEEEECHHHHHHHHHHTCSSEEECHHHHHHHHHHTCTTCGGGTCCCHHHHHHHHHTTCCGGGGCCCEEEEECTTC
T ss_pred cccccchhcccccccchhccccccccchhhhhhhccccCCCCcchhccccccccccccccccccccchhhhhcccccccc
Confidence 011111 00
Q ss_pred ---------------cH-HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhh
Q 047407 73 ---------------SS-TIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQR 136 (294)
Q Consensus 73 ---------------s~-~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~ 136 (294)
++ ..+.+.||+||++||+.+++++|+++|++++++|++.|||+++|+|+|+++.+++....+
T Consensus 541 ~l~~~~~~~~~VdlnA~ly~al~~lA~lA~~LG~~e~A~~y~~~A~~lk~ai~~~fWd~e~G~y~D~~~~~~~~~~~~-- 618 (761)
T 3c68_A 541 TLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPTTQFYYDVRIEDKPLANGC-- 618 (761)
T ss_dssp CEEEEEESEECHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTEETTTTEECCEECCSSCCTTSC--
T ss_pred ccccCcccccCHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcCccCCEEEEEecCCCcccccc--
Confidence 11 115678999999999999999999999999999999999999999999987642100000
Q ss_pred ccCCCCc--cceehhhhHHHhccCCCCchHHHHHHHHHhhhc-Ccccccccccc-----cCCCCCCCCCCCCCchHHHHH
Q 047407 137 WKGSNQS--NNAFTSNFVPIWIDLFNSNTCIVEKVKKSFQSS-GFLGAAGIATS-----LTRSREQWDFPNGWAPLQHMI 208 (294)
Q Consensus 137 ~~~~~~~--~~~~~s~~~PL~~g~~~~~~~~~~~~~~~l~~~-~~~~~~Gi~ts-----~~~~~~~W~gPnvW~~~~~l~ 208 (294)
.+... +.++.++++||++|++++++ ++++++.|.++ .+.+++||+|. .++++.||+|| ||++++|++
T Consensus 619 --~g~~~sn~~~~~s~~~pL~~Gl~~~e~--a~~vl~~L~~~~~l~t~~Girtls~~~p~y~p~~yw~Gp-vW~~~~~ll 693 (761)
T 3c68_A 619 --AGKPIVERGKGPEGWSPLFNGAATQAN--ADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGR-VWVDQFWFG 693 (761)
T ss_dssp --SSCBCGGGCCCGGGGHHHHTTCSCHHH--HHHHHHHHTCTTTTCCSSCSCSSCTTCTTCCTTCTTTTC-EEHHHHHHH
T ss_pred --ccceeecchhhHHHHHHHHcCCCCHHH--HHHHHHHHhChhhhcCCCCccccCCCCcccCCCccccCC-cccchHHHH
Confidence 01111 33568899999999998764 58899999865 46689999873 35678999999 999999999
Q ss_pred HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHHhCCC
Q 047407 209 VEGLAKSGLQEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEFGWP 286 (294)
Q Consensus 209 ~~gL~~yg~~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~~~~~ 286 (294)
++||.++|+. ++|.+|+.+++.. ...+.++|.|+|+||+.++... | ..+||||||++|.++.+|+.+
T Consensus 694 i~aL~~~G~~---d~A~~l~~~~~~~-~~~~~~~G~~~E~yd~~tg~p~--G-----~~~fgWSaa~~l~ll~~y~~~ 760 (761)
T 3c68_A 694 LKGMERYGYR---DDALKLADTFFRH-AKGLTADGPIQENYNPLTGAQQ--G-----APNFSWSAAHLYMLYNDFFRK 760 (761)
T ss_dssp HHHHHHTTCH---HHHHHHHHHHHHH-STTTTSSSCCCSEECTTTCCEE--S-----CSSCHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHcCCH---HHHHHHHHHHHHH-HHHHhhCCceeeEecCCCCCcC--c-----CCCchHHHHHHHHHHHHHhcc
Confidence 9999999998 5899999999864 3456778999999999875422 2 367899999999999999764
No 4
>2okx_A Rhamnosidase B; alpha barrel, glycoside hydrolase family 78, I hydrolase; 1.90A {Bacillus SP}
Probab=99.87 E-value=4.9e-21 Score=196.39 Aligned_cols=236 Identities=15% Similarity=0.147 Sum_probs=165.2
Q ss_pred CCcchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCee----eceeeecCCCCCCCC-c-----
Q 047407 4 SQPPLLSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNH----TLSRYYGMWNKLRPE-S----- 73 (294)
Q Consensus 4 sqPP~~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~----~l~~y~~~~~~prpe-s----- 73 (294)
.++|+++++++.||+.|||.+||+++||.|+++++|+.+..+ ++|... .+.. |.+...|+.. .
T Consensus 628 ~~~~~~i~~~~~yy~~tGD~~~L~e~yp~lk~~l~~~~~~~d------~~GLl~~~~~~~~D-W~d~~~~~~G~~~~~~a 700 (956)
T 2okx_A 628 NWTFFWILACREYAAHTGNEAFAARIWPAVKHTLTHYLEHID------DSGLLNMAGWNLLD-WAPIDQPNEGIVTHQNL 700 (956)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTBC------TTSSBCCSSCCCCC-SSSCCCCSSSEEHHHHH
T ss_pred ChHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcCC------CCCCEEeCCCCccC-ccCCCCCCCCcCHHHHH
Confidence 357899999999999999999999999999999999987643 244311 1111 2111112221 1
Q ss_pred H-HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhhccCCCCccce-ehhhh
Q 047407 74 S-TIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQRWKGSNQSNNA-FTSNF 151 (294)
Q Consensus 74 ~-~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~ 151 (294)
+ ..+.+.+++||++||+.+++++|+++|++++++|++.|||++.|.|.|....+ +...... ..+++
T Consensus 701 ~~~~al~~~a~lA~~LG~~~~a~~y~~~A~~lk~ai~~~~wd~~~g~y~d~~~~~------------g~~~~~~~~~s~~ 768 (956)
T 2okx_A 701 FLVKALRDSRALAAAAGATEEADAFAARADLLAETINAVLWDEEKRAYIDCIHAD------------GRRSDVYSMQTQV 768 (956)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHHHHHHSEETTTTEECSEECTT------------SCBCCCCBHHHHH
T ss_pred HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhcCCCCCEEEeeecCC------------CCcccccccHHHH
Confidence 1 12557899999999999999999999999999999999999999999875332 2222222 47889
Q ss_pred HHHhccCCCCchHHHHHHHHHhhhcCcccccccccccCCCCCCCC-CCCCCchHHHHHHHHHHhcCcHHHHHHHHHHHHH
Q 047407 152 VPIWIDLFNSNTCIVEKVKKSFQSSGFLGAAGIATSLTRSREQWD-FPNGWAPLQHMIVEGLAKSGLQEAKSMAQDIAMR 230 (294)
Q Consensus 152 ~PL~~g~~~~~~~~~~~~~~~l~~~~~~~~~Gi~ts~~~~~~~W~-gPnvW~~~~~l~~~gL~~yg~~~~~~~A~~la~~ 230 (294)
+||++|++|+++. +++ +.|.... +..|++ |. +|+ .++++++|.++|+. +.|.+|..+
T Consensus 769 lall~Gl~p~~~~--~av-~~Ll~~~-------------~~gy~~~Gt-~w~--~~~li~aLar~G~~---d~A~~ll~~ 826 (956)
T 2okx_A 769 VAYLCGVAQGERE--AVI-EGYLSSP-------------PPAFVQIGS-PFM--SFFYYEALEKAGRQ---TLMLDDIRR 826 (956)
T ss_dssp HHHHTTCSCHHHH--HHH-HHHHHSC-------------CTTSBCCCS-HHH--HHHHHHHHHHTTCH---HHHHHHHHH
T ss_pred HHHHhCCCCHHHH--HHH-HHHhcCC-------------CcccccCCC-hhH--HHHHHHHHHHCCCH---HHHHHHHHH
Confidence 9999999998753 455 5543221 123454 55 885 49999999999998 488888865
Q ss_pred HHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHHh
Q 047407 231 WINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 283 (294)
Q Consensus 231 ~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~~ 283 (294)
....... ...+.++|.||+.+.+..+ +|.+.....|+|++++..+|++..
T Consensus 827 ~~~~~~~--~g~tt~~E~~d~~~~~~~~-~~~~~~s~nh~Wsag~~~~L~q~l 876 (956)
T 2okx_A 827 NYGQMLR--YDATTCWEMYPNFAENRSN-PDMLTRSHCHAWSAAPGYFLGSSI 876 (956)
T ss_dssp HHHHHHH--TTCSSCCSSCSSCCTTSSS-TTSSCSCSCCGGGCTHHHHHHHTT
T ss_pred HHHHHHh--cCCCccceeccCCCCCccc-CCCcccccCcHHHHHHHHHHHHHh
Confidence 4432221 1124799999987643221 122222467999999998888754
No 5
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.86 E-value=2.1e-20 Score=187.10 Aligned_cols=231 Identities=19% Similarity=0.255 Sum_probs=160.1
Q ss_pred cchHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeece-----eeecCCCCCCCC-c-----H
Q 047407 6 PPLLSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLS-----RYYGMWNKLRPE-S-----S 74 (294)
Q Consensus 6 PP~~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~-----~y~~~~~~prpe-s-----~ 74 (294)
+|+|.++++.||+.|||.+||++++|.|+++++|+.+.++ ++|...... .-|.+...|+.. . |
T Consensus 386 ~l~wi~~~~~yy~~tGD~~~L~e~~p~l~~~ld~~~~~~d------~~GL~~~~~G~W~~~dW~d~~~~~~G~~~~~~a~ 459 (739)
T 3cih_A 386 TFYWFLSVYDYYMYSGDRHFVNQLYPRMQTMMDYVLGRTN------KNGMVEGMSGDWVFVDWADGYLDKKGELSFEQVL 459 (739)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTTBC------TTSCBCCCTTCBCCSCCCTTCCCCSSEEHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhcC------CCCCcccCCCCcccCCCcccccCCCCcchHHHHH
Confidence 4678999999999999999999999999999999887643 344311100 001111123331 1 1
Q ss_pred -HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhhccCCCCcc-ceehhhhH
Q 047407 75 -TIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQRWKGSNQSN-NAFTSNFV 152 (294)
Q Consensus 75 -~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~ 152 (294)
..+.+.+|+||+.||++++|++|+++|++++++|++.|||++.|.|.|-... |...+ ....++++
T Consensus 460 ~y~al~~~a~lA~~lG~~~~A~~y~~~A~~lk~a~~~~~wd~~~G~y~~~~~~-------------G~~~d~~~~~s~~l 526 (739)
T 3cih_A 460 FCRSLETMALCADLVGDKDGQQKYEKLASALKAKLEPTFWNNQKQAFVHNCVD-------------GRQSDAVTRYANMF 526 (739)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHEETTTTEECSEEET-------------TEECSCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCcccCeeEeecCC-------------CCcCcccchHHhHH
Confidence 1155789999999999999999999999999999999999999998853222 22222 23468899
Q ss_pred HHhccCCCCchHHHHHHHHHhhhcCcccccccccccCCCCCCCCCCCCCchHHHHHHHHHHhcCcHHHHHHHHHHHHH-H
Q 047407 153 PIWIDLFNSNTCIVEKVKKSFQSSGFLGAAGIATSLTRSREQWDFPNGWAPLQHMIVEGLAKSGLQEAKSMAQDIAMR-W 231 (294)
Q Consensus 153 PL~~g~~~~~~~~~~~~~~~l~~~~~~~~~Gi~ts~~~~~~~W~gPnvW~~~~~l~~~gL~~yg~~~~~~~A~~la~~-~ 231 (294)
||++|++++++ ++++++.|.... ++ ..++||.+++++++||.++|+. +.|.+|..+ |
T Consensus 527 aL~~Gl~~~e~--~~~v~~~L~~~~-----~~------------~~~~tp~~~~~~~~aL~~~G~~---d~A~~ll~~~w 584 (739)
T 3cih_A 527 SVFFDYLNADK--QQAIKQSVLLND-----EI------------LKITTPYMRFYELEALCALGEQ---ETVMKEMKAYW 584 (739)
T ss_dssp HHHTTCSCHHH--HHHHHHHTTTCT-----TS------------CCCCSHHHHHHHHHHHHHTTCH---HHHHHHHHHHH
T ss_pred HHHHCCCCHHH--HHHHHHHHhcCc-----cc------------ccccchhHHHHHHHHHHHcCCH---HHHHHHHHHHH
Confidence 99999999875 477887774221 11 1348999999999999999998 488886544 3
Q ss_pred HHHHHHHHhhcC--ccceeeccccCCc--c-CCCccccCCCCccccHHHHHHHHHH
Q 047407 232 INTNYVAYKETG--AMHEKYDVEKCGD--I-GGGGEYIPQTGFGWSNGVVLAFLEE 282 (294)
Q Consensus 232 ~~~~~~~~~~~g--~~~E~Y~~~~~~~--~-g~gGey~~~~~fgWT~~v~L~~~~~ 282 (294)
...+ ..| .|||.|++...+. . ..|..+.+....+|+++...+|.+.
T Consensus 585 ~~~v-----~~Gattl~E~~~~~~~~~~~~~~~g~~~~~s~~HaW~ag~~~~l~~~ 635 (739)
T 3cih_A 585 GGML-----KAGATSFWEKYNPEESGTQHLAMYGRPYGKSLCHAWGASPIYLLGKY 635 (739)
T ss_dssp HHHH-----TTTCSSCCSCCCTTCCGGGGGCBTTBTTCSCSSBGGGCTHHHHHHHH
T ss_pred HHHH-----hCCCceeEEecccccCCcccccccccccCcccccccccchHHHHHHH
Confidence 3332 334 6999999964211 0 1122222334458999887666653
No 6
>1v7w_A Chitobiose phosphorylase; beta-sandwich, (alpha/alpha)6 barrel, transferase; HET: NDG NAG; 1.60A {Vibrio proteolyticus} SCOP: a.102.1.4 b.30.5.3 PDB: 1v7v_A* 1v7x_A*
Probab=99.69 E-value=7.5e-17 Score=162.90 Aligned_cols=208 Identities=13% Similarity=0.153 Sum_probs=142.5
Q ss_pred CCcchHHHHHHHHHHHcCCHHHHHHHHHH-----------HHHHHHHHhhCCCccccccCCCCeeeceee-ecCCC---C
Q 047407 4 SQPPLLSAMVYDIYNRTGDLDLVKKALSA-----------LLKEHQFWNSGIHKVNIQEDHGRNHTLSRY-YGMWN---K 68 (294)
Q Consensus 4 sqPP~~~~~v~~~y~~t~D~~fL~~~~p~-----------l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y-~~~~~---~ 68 (294)
..++++.++++.||+.|||.+||++++|. +++.++|.....+ ++|. ..+ ..++. .
T Consensus 426 D~~lw~~~~~~~y~~~tGD~~~L~e~~p~~~~~~~~v~e~~~~~~~~~~~~~~------~~GL----~~~~~~DW~D~~~ 495 (807)
T 1v7w_A 426 DDHLWLIPTICKYVMETGETSFFDQMIPYADGGEASVYEHMKAALDFSAEYVG------QTGI----CKGLRADWNDCLN 495 (807)
T ss_dssp SGGGGHHHHHHHHHHHHCCGGGGGCEEECTTSCEEEHHHHHHHHHHHHHHSBC------TTSC----BEEETCSSSTTCC
T ss_pred chhhHHHHHHHHHHHHhCCHHHHhcccccccCCcchHHHHHHHHHHHHHhcCC------CCCC----cccCCCCCCCcCC
Confidence 34678889999999999999999999885 9999998877543 3553 222 12221 1
Q ss_pred C-CCCcH------HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhhccCCC
Q 047407 69 L-RPESS------TIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQRWKGSN 141 (294)
Q Consensus 69 p-rpes~------~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~~~~~~ 141 (294)
+ ..++. ..+.+.+|+||+.+|+.+++++|+++|++++++|++.|||++.+.|........... +. ....
T Consensus 496 ~~~g~~v~~~a~~y~al~~~a~la~~lG~~~~a~~~~~~A~~lk~~~~~~~w~~~~~~f~~~~~~d~~~~-g~---~~~~ 571 (807)
T 1v7w_A 496 LGGGESSMVSFLHFWALQEFIDLAKFLGKDQDVNTYTEMAANVREACETHLWDDEGGWYIRGLTKNGDKI-GT---AQQQ 571 (807)
T ss_dssp CEEEEEHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHSEETTTTEECCEECTTSCEE-SC---TTCS
T ss_pred CCCCeehhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeeeeeeccCCCCc-CC---ccCC
Confidence 1 11221 114578999999999999999999999999999999999998776543332211000 00 0001
Q ss_pred CccceehhhhHHHhccCCCCchHHHHHHHHHhhhcCcccccccccc---------------cCCCCCCCCCCCCCchHHH
Q 047407 142 QSNNAFTSNFVPIWIDLFNSNTCIVEKVKKSFQSSGFLGAAGIATS---------------LTRSREQWDFPNGWAPLQH 206 (294)
Q Consensus 142 ~~~~~~~s~~~PL~~g~~~~~~~~~~~~~~~l~~~~~~~~~Gi~ts---------------~~~~~~~W~gPnvW~~~~~ 206 (294)
..+....++.+||++|+++++++ +++++.+.+ .+..++|+.+. .+.++.+-+|. +|++.|.
T Consensus 572 ~~~~~~~~~~~al~~g~~~~e~a--~~~l~~v~~-~L~~~~G~~~~~p~~~~~~~~~g~~~~y~~~~~enG~-~~~~~~~ 647 (807)
T 1v7w_A 572 EGRVHLESNTLAVLSGLASQERG--EQAMDAVDE-HLFSPYGLHLNAPSFSTPNDDIGFVTRVYQGVKENGA-IFSHPNP 647 (807)
T ss_dssp SCCEEHHHHHHHHHTTCSCHHHH--HHHHHHHHH-HHEETTEECSEESCCCSCCTTTCGGGGSCTTBTTBTS-EESTTHH
T ss_pred CCcCcccchHHHHhhCCCCHHHH--HHHHHHHHH-hcCCCCceeecCCcccccCcCCceeeccCCccccccc-cccchHH
Confidence 12344577899999999998753 555555542 22245665431 13344455788 9999999
Q ss_pred HHHHHHHhcCcHHHHHHHHHHHHHHH
Q 047407 207 MIVEGLAKSGLQEAKSMAQDIAMRWI 232 (294)
Q Consensus 207 l~~~gL~~yg~~~~~~~A~~la~~~~ 232 (294)
+++.||.++|+. +.|.++.+++.
T Consensus 648 w~~~al~~~G~~---d~A~~l~~~~~ 670 (807)
T 1v7w_A 648 WAWVAETKLGRG---DRAMKFYDALN 670 (807)
T ss_dssp HHHHHHHHTTCH---HHHHHHHHHHC
T ss_pred HHHHHHHHcCCH---HHHHHHHHHhC
Confidence 999999999998 48888877764
No 7
>3qde_A Cellobiose phosphorylase; cellulase, phosphate, transferase; 2.40A {Clostridium thermocellum}
Probab=99.55 E-value=6.7e-14 Score=140.84 Aligned_cols=206 Identities=14% Similarity=0.073 Sum_probs=139.7
Q ss_pred hHHHHHHHHHHHcCCHHHHHH-------------HHHHHHHHHHHHhhCCCccccccCCCCeee-ceeeecC-C------
Q 047407 8 LLSAMVYDIYNRTGDLDLVKK-------------ALSALLKEHQFWNSGIHKVNIQEDHGRNHT-LSRYYGM-W------ 66 (294)
Q Consensus 8 ~~~~~v~~~y~~t~D~~fL~~-------------~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~-l~~y~~~-~------ 66 (294)
.+.++|..|++.|||.+||++ +|+.+++..+|-....+ ++|.... -.. |.+ .
T Consensus 419 W~i~av~~Y~~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g------~~GL~~~g~~D-WnD~ln~~~~~ 491 (811)
T 3qde_A 419 WLILATAAYIKETGDYSILKEQVPFNNDPSKADTMFEHLTRSFYHVVNNLG------PHGLPLIGRAD-WNDCLNLNCFS 491 (811)
T ss_dssp HHHHHHHHHHHHHCCGGGGGSEEEETTEEEEEEEHHHHHHHHHHHHHTCBC------TTSSBBCBTCS-SSTTCCSSCCC
T ss_pred HHHHHHHHHHHHHCCHHHHHhhhhhhcCCcccccHHHHHHHHHHHHHhcCC------CCCCcccccCC-chhhccccccc
Confidence 477999999999999999975 68899999997665433 3343110 011 211 0
Q ss_pred ---------CCCC----CCcH------HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCC
Q 047407 67 ---------NKLR----PESS------TIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISN 127 (294)
Q Consensus 67 ---------~~pr----pes~------~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~ 127 (294)
.+|+ .++. ..+.+.+|+||+.+|+.+.|+.|+++|++++++|++.|||+ +.|.+....+
T Consensus 492 ~~vg~~~~~vtp~~~~~gesv~~~al~y~AL~~~a~lA~~lGd~~~A~~~~~~A~~lk~a~~~~~Wdg--~~y~ra~~~d 569 (811)
T 3qde_A 492 TVPDESFQTTTSKDGKVAESVMIAGMFVFIGKDYVKLCEYMGLEEEARKAQQHIDAMKEAILKYGYDG--EWFLRAYDDF 569 (811)
T ss_dssp CCTTSCTTTSCCCCCSSCEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSBCS--SSBCCEECTT
T ss_pred cccCccccccccccCCcccCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhccCc--CeEEEEEcCC
Confidence 1122 2331 12557899999999999999999999999999999999987 4443322111
Q ss_pred CcccchhhhccCCCCccceehhhhHHHhccCCCCc-hHHHHHHHHHhhhcCccccccccc--c-------------cCCC
Q 047407 128 RTSSQECQRWKGSNQSNNAFTSNFVPIWIDLFNSN-TCIVEKVKKSFQSSGFLGAAGIAT--S-------------LTRS 191 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~s~~~PL~~g~~~~~-~~~~~~~~~~l~~~~~~~~~Gi~t--s-------------~~~~ 191 (294)
+. . ..-......+++..++.+++++|+++++ ++ +++++.+.+ .+.+|+||++ + .+.+
T Consensus 570 g~--~--~gs~~~~~~qi~~~~q~~avlsGia~~e~ra--~~~m~~v~~-~L~t~~Glrll~p~f~~~~~d~g~~~~Y~p 642 (811)
T 3qde_A 570 GR--K--VGSKENEEGKIFIESQGFCVMAEIGLEDGKA--LKALDSVKK-YLDTPYGLVLQNPAFTRYYIEYGEISTYPP 642 (811)
T ss_dssp SC--E--ESSTTSSSCCEESHHHHHHHHTTCSSSSSHH--HHHHHHHHH-HHCCTTCCCSEESCCCSCCTTTGGGGTSCT
T ss_pred CC--C--CCccCCCCceEEecchhHHHHhCCCCchHHH--HHHHHHHHH-HhCCCcceEeecCCccccCCCCCceeccCC
Confidence 10 0 0000011234556777899999999988 75 566665542 3457778765 1 1455
Q ss_pred CCCCCCCCCCchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Q 047407 192 REQWDFPNGWAPLQHMIVEGLAKSGLQEAKSMAQDIAMRWIN 233 (294)
Q Consensus 192 ~~~W~gPnvW~~~~~l~~~gL~~yg~~~~~~~A~~la~~~~~ 233 (294)
+.+-+|- +|++.+.+++.||.++|..+ .|.++......
T Consensus 643 g~~enG~-iy~H~~~w~~~a~a~~G~~~---~A~~~~~~l~p 680 (811)
T 3qde_A 643 GYKENAG-IFCHNNAWIICAETVVGRGD---MAFDYYRKIAP 680 (811)
T ss_dssp TSTTTTC-EEHHHHHHHHHHHHHTTCHH---HHHHHHHHHCG
T ss_pred Ccccccc-ccchHHHHHHHHHHHcCCHH---HHHHHHHHhCh
Confidence 6778888 99999999999999999984 78777766654
No 8
>3rrs_A Cellobiose phosphorylase; GH94, alpha barrel, disaccharide phosphorylase, transferase; 1.70A {Cellulomonas uda} PDB: 3rsy_A* 3s4a_A* 3s4b_A* 3s4c_A* 3s4d_A* 2cqs_A* 2cqt_A* 3qfy_A* 3qfz_A* 3qg0_A* 3act_A* 3acs_A* 3afj_A*
Probab=99.54 E-value=1.5e-13 Score=138.40 Aligned_cols=208 Identities=12% Similarity=0.035 Sum_probs=141.6
Q ss_pred hHHHHHHHHHHHcCCHHHHHH-------------HHHHHHHHHHHHhhCCCccccccCCCCee-eceeeecC-C------
Q 047407 8 LLSAMVYDIYNRTGDLDLVKK-------------ALSALLKEHQFWNSGIHKVNIQEDHGRNH-TLSRYYGM-W------ 66 (294)
Q Consensus 8 ~~~~~v~~~y~~t~D~~fL~~-------------~~p~l~k~~~~w~~~r~~~~~~~~~G~~~-~l~~y~~~-~------ 66 (294)
++.++|..|++.|||.+||++ +|+.+++..+|-....+ ++|... +-.. |.+ .
T Consensus 426 Wl~~av~~Yi~~TGD~~~L~e~~p~~~~~~~~~tl~eh~~ra~~~~~~~~g------~~GLp~~g~gD-WnD~ln~~~~~ 498 (822)
T 3rrs_A 426 WLIAGTAAYIKETGDFSILDEPVPFDNEPGSEVPLFEHLTRSFEFTVTHRG------PHGLPLIGRAD-WNDCLNLNCFS 498 (822)
T ss_dssp HHHHHHHHHHHHHCCGGGGGSEECSTTCTTCCEEHHHHHHHHHHHHHHSBC------TTSSBBCBTCS-SSTTCCTTCCC
T ss_pred HHHHHHHHHHHHHCCHHHHHhhhhhhccccccccHHHHHHHHHHHHHhcCC------CCCCcccCCCc-chhhccccccc
Confidence 477899999999999999986 67799999998775543 233211 0001 211 0
Q ss_pred ---------CCC----CCCcH------HHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCC
Q 047407 67 ---------NKL----RPESS------TIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISN 127 (294)
Q Consensus 67 ---------~~p----rpes~------~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~ 127 (294)
.+| +.||. ..+.+.+|+||+.+|+.+.|+.|+++|++++++|++.+||++ .|.+.-..+
T Consensus 499 ~~vg~~~~~~~p~~~~~Gesv~~~al~y~AL~~~a~lA~~~G~~~~A~~~~~~A~~lk~a~~~~~Wdg~--~y~ra~d~d 576 (822)
T 3rrs_A 499 TTPGESFQTTENQAGGVAESTFIAAQFVLYGEQYAELAARRGLADVADRARGHVAEMRDALLTDGWDGS--WFLRAYDYY 576 (822)
T ss_dssp CSTTCCTTTCCSSCCCCCEEHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTBCSS--SBCCEECTT
T ss_pred ccccccccccccccCCccccHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCcc--eeEEEEcCC
Confidence 112 22331 114568999999999999999999999999999999999873 333222111
Q ss_pred CcccchhhhccCCCCccceehhhhHHHhccCCCCc-------hHHHHHHHHHhhhcCccccccccc--c-----------
Q 047407 128 RTSSQECQRWKGSNQSNNAFTSNFVPIWIDLFNSN-------TCIVEKVKKSFQSSGFLGAAGIAT--S----------- 187 (294)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~s~~~PL~~g~~~~~-------~~~~~~~~~~l~~~~~~~~~Gi~t--s----------- 187 (294)
+. ...-......++...+..+++++|+++++ ++ +++++.+. ..+.+|+||++ +
T Consensus 577 g~----~~gs~~~~~~~i~~~~q~~avlsGia~~e~~~~~~~~a--~~al~~v~-~~L~t~~Girll~p~f~~~~~~~g~ 649 (822)
T 3rrs_A 577 GN----PIGTDAHDEGKIWIEPQGFAVMAGVGVGEGPQDTDAPA--IKALDSVN-EMLATDHGMVLQYPAYTTYQVHMGE 649 (822)
T ss_dssp SC----EESCTTSSSCCEEHHHHHHHHHTTTTCCSSTTCTTSHH--HHHHHHHH-HHTEETTEEBSEESCCSSCCTTSTT
T ss_pred CC----CccccCCCCceEEeccchhHhhcCCCCcccccchHHHH--HHHHHHHH-HHcCCCCeEEEcCCCcccccCCCCc
Confidence 00 00000011234555677899999999988 54 66666664 33457888765 1
Q ss_pred --cCCCCCCCCCCCCCchHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Q 047407 188 --LTRSREQWDFPNGWAPLQHMIVEGLAKSGLQEAKSMAQDIAMRWINTN 235 (294)
Q Consensus 188 --~~~~~~~W~gPnvW~~~~~l~~~gL~~yg~~~~~~~A~~la~~~~~~~ 235 (294)
.+.++.+.+|- +|++.|-+++.||.++|..+ .|.++........
T Consensus 650 ~~~Y~pg~~enG~-iy~H~~~w~~~a~a~~G~~~---~A~~~~~~l~p~~ 695 (822)
T 3rrs_A 650 VSTYPPGYKENGG-IFCHNNPWVIIAETVVGRGG---RAFDYYKRITPAY 695 (822)
T ss_dssp GGGSCTTBTTBTC-EETTTHHHHHHHHHHHTCHH---HHHHHHHHHCHHH
T ss_pred ccccCCCcccccc-ccccHHHHHHHHHHHcCCHH---HHHHHHHHhCccc
Confidence 14567788888 99999999999999999984 7887776666543
No 9
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=99.32 E-value=2.8e-11 Score=113.02 Aligned_cols=241 Identities=15% Similarity=0.182 Sum_probs=145.2
Q ss_pred HHHHHHHHHHHcCCHHHHHHHH-HHHHHHHHHHhhCCCccccccCCCC----------eeece--------eeec-CCCC
Q 047407 9 LSAMVYDIYNRTGDLDLVKKAL-SALLKEHQFWNSGIHKVNIQEDHGR----------NHTLS--------RYYG-MWNK 68 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~-p~l~k~~~~w~~~r~~~~~~~~~G~----------~~~l~--------~y~~-~~~~ 68 (294)
+..+++.||+.|+|.+|+.+.| .++++.+++|..+.+.- +..|. ..+|. .+.. -...
T Consensus 185 ~L~la~~Yy~~TgD~~~f~~~w~~av~~il~~l~~eq~~~---~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~ 261 (489)
T 2p0v_A 185 PIRLAYHYWKTTGDASVFSDEWLQAIANVLKTFKEQQRKD---DAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASA 261 (489)
T ss_dssp HHHHHHHHHHHHCCCTTSSHHHHHHHHHHHHHHHHTTCSS---CSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCS
T ss_pred HHHHHHHHHHHhCCchhhHHHHHHHHHHHHHHHHHHhccc---CCCCCceEeecCCCcccccccCCCCCccCCCCceeCC
Confidence 4568899999999999998777 78899999998743310 00010 00000 0000 0134
Q ss_pred CCCC----cHHH----------HHHHHHHHHHHhC-CchhHHHHHHHHHHHHHHHHhhccccC--CCeEEeeecCCCccc
Q 047407 69 LRPE----SSTI----------MELDIASMAQIVG-DNRTAESFLKAAQARKQAINSVFWNKE--KGQWLDYWISNRTSS 131 (294)
Q Consensus 69 prpe----s~~~----------~~~~lA~la~~lG-~~~~a~~~~~~A~~l~~ai~~~lWdee--~g~y~D~~~~~~~~~ 131 (294)
+||. -|.. ..+.+|+|++.+| +.+.+++|++.|++++++|.++.+++. .|..|-|.++..
T Consensus 262 fRPSDDa~~yg~~ipSN~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~~gv~~~p~~G~ifAyEVDG~--- 338 (489)
T 2p0v_A 262 FRPSDDATTFQFLVPSNFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKKYAVCNHPKYGKIYAFEVDGF--- 338 (489)
T ss_dssp BCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSS---
T ss_pred CCCCCcchhcCcchHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCccEEEEEecCC---
Confidence 5663 1110 3356889999998 455699999999999999999999985 564555766431
Q ss_pred chhhhccCCCC---ccceehhhh-HHHhccCCCCchHHHHHHHHHhhhcCcccccccccccC-CCCCCCCC-CCCCchHH
Q 047407 132 QECQRWKGSNQ---SNNAFTSNF-VPIWIDLFNSNTCIVEKVKKSFQSSGFLGAAGIATSLT-RSREQWDF-PNGWAPLQ 205 (294)
Q Consensus 132 ~~~~~~~~~~~---~~~~~~s~~-~PL~~g~~~~~~~~~~~~~~~l~~~~~~~~~Gi~ts~~-~~~~~W~g-PnvW~~~~ 205 (294)
|.. .+..-+|-+ +| ++|.++++..+..+..+.+.++. .|+....+.. .-|.---+ .|+||-..
T Consensus 339 --------G~~~~mDDanvpSLLslP-ylG~~~~dDpiy~nTr~~IlS~~--NPyy~~G~~~~GIGspH~~~~~~Wpmsl 407 (489)
T 2p0v_A 339 --------GNQLLMDDANVPSLIALP-YLGDVKVTDPIYQNTRKFVWSED--NPYFFKGSAGEGIGGPHIGYDMIWPMSI 407 (489)
T ss_dssp --------SCEECCCCSSSSCSTTHH-HHTSSCTTCHHHHHHHHHHTSTT--STTEEECSSCEEECCTTTCTTEECHHHH
T ss_pred --------CCcccCCCCCccHHHHHH-HhCCCCCCCHHHHHHHHHHHhhc--CCcccccccccCCCCCCCCCCchHHHHH
Confidence 111 011123444 55 78888877666777777776432 2332211110 00000011 24887766
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHHh
Q 047407 206 HMIVEGLAKSGLQEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 283 (294)
Q Consensus 206 ~l~~~gL~~yg~~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~~ 283 (294)
.+.+ |. .+.. +.+.++.+..+++. ..+|.|.|.||+.++ +......|+|+|+.+..++-++
T Consensus 408 l~~a--lt-s~d~---~E~~~~L~~l~~t~----~gtGLmhEs~d~~~~-------~~~TR~wFaWanslF~e~il~l 468 (489)
T 2p0v_A 408 MMKA--FT-SQND---AEIKTCIKMLMDTD----AGTGFMHESFNKNDP-------KNFTRAWFAWQNTLFGELILKL 468 (489)
T ss_dssp HHHH--HT-CCCH---HHHHHHHHHHHHTS----TTSCSCCSEEETTEE-------EEEECSCBHHHHHHHHHHHHHH
T ss_pred HHHH--Hh-cCCH---HHHHHHHHHHHhhC----CCCCeeeeeECCCCC-------CcCCCcccHHHHHHHHHHHHHH
Confidence 5554 43 4444 35666664444332 358999999999864 2223578999999988877655
No 10
>1lf6_A Glucoamylase; (alpha/alpha) barrel, 6 alpha-helical hairpin torroid, super beta sandwich, carbohydrase family GH15; 2.10A {Thermoanaerobacteriumthermosaccharolyticum} SCOP: a.102.1.5 b.30.5.5 PDB: 1lf9_A*
Probab=99.20 E-value=2.6e-10 Score=112.98 Aligned_cols=191 Identities=10% Similarity=0.041 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccC-----CCeEEeeecCCCcccchhhhccCC----CCcccee
Q 047407 77 MELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKE-----KGQWLDYWISNRTSSQECQRWKGS----NQSNNAF 147 (294)
Q Consensus 77 ~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee-----~g~y~D~~~~~~~~~~~~~~~~~~----~~~~~~~ 147 (294)
+...+++||+.+|+.+.++.|++.|+++++.|++.+||++ .+.|.......+......+....+ ...+.+.
T Consensus 454 aL~~~a~lA~~~g~~~~a~~~~~~a~~i~~~i~~~~w~~~~~~g~~~~f~r~~~d~~~~~~~~~~~~~~~~~~~~~~~lD 533 (684)
T 1lf6_A 454 GLTCAAYIAEQNKDYESAQKYQEKADNWQKLIDNLTYTENGPLGNGQYYIRIAGLSDPDADFMINIANGGGVYDQKEIVD 533 (684)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHEESSCSSTTSCEECSCBSSSCTTSCCEEEETTTTEEEEGGGCCC
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHhccCCCcccccCCeeEEEeccCCCccccccccccccccCCCCCcEe
Confidence 3457899999999999999999999999999999999998 777754322111000000000000 1223455
Q ss_pred hhhhHHHhccCCCCchHHHHHHHHHhhhcCcc--cccc--ccccc---CC---CCCCCCCC---CCCchHHHHHHHHHHh
Q 047407 148 TSNFVPIWIDLFNSNTCIVEKVKKSFQSSGFL--GAAG--IATSL---TR---SREQWDFP---NGWAPLQHMIVEGLAK 214 (294)
Q Consensus 148 ~s~~~PL~~g~~~~~~~~~~~~~~~l~~~~~~--~~~G--i~ts~---~~---~~~~W~gP---nvW~~~~~l~~~gL~~ 214 (294)
++.++++++|+++++..++.+.++.+.+. +. .+.| +.... +. .|.+|.++ |+||..+..++++|.+
T Consensus 534 as~l~~~~~G~~~~~dpr~~~Tl~~i~~~-L~~~~~~G~~~~RY~~d~y~~~~~G~~f~~~g~g~~W~~~t~~~a~al~~ 612 (684)
T 1lf6_A 534 PSFLELVRLGVKSADDPKILNTLKVVDST-IKVDTPKGPSWYRYNHDGYGEPSKTELYHGAGKGRLWPLLTGERGMYEIA 612 (684)
T ss_dssp GGGGHHHHTTSSCTTCHHHHHHHHHHHHH-SEEEETTEEEECSSTTCCCSCSBTTBCCSSSSCCCBBHHHHHHHHHHHHH
T ss_pred HHHhHHHhcCCcCCCCHHHHHHHHHHHHH-hccCCCCCCeEeccCCCCCCcccCCCccccCCCCCchHHHHHHHHHHHHH
Confidence 67778889999988765556555555432 11 2333 32211 11 23344443 7999999999999999
Q ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHHh
Q 047407 215 SGLQEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 283 (294)
Q Consensus 215 yg~~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~~ 283 (294)
.|. + |.++.+..+... ...|.|.|.|++.++...| .....+||++.+|.++...
T Consensus 613 ~G~-~----A~~~~~~l~~~a----~~~gllpE~~~~~~g~~~G------~a~PqaWSha~~i~~~~~l 666 (684)
T 1lf6_A 613 AGK-D----ATPYVKAMEKFA----NEGGIISEQVWEDTGLPTD------SASPLNWAHAEYVILFASN 666 (684)
T ss_dssp TTC-C----CHHHHHHHHHHS----CTTSCCCSCBCTTTCCBCS------SCSSCHHHHHHHHHHHHHH
T ss_pred hCh-H----HHHHHHHHHHhc----ccCCccCeeecCCCCCCCC------CCcchHHHHHHHHHHHHHH
Confidence 998 3 555554444321 3468999999998643221 2356899999999887544
No 11
>1ulv_A Glucodextranase; GH family 15, (alpha-alpha)6-barrel, SLH domain, hydrolase; HET: ACR; 2.42A {Arthrobacter globiformis} SCOP: a.102.1.5 b.1.18.2 b.1.9.3 b.30.5.5 PDB: 1ug9_A*
Probab=99.10 E-value=2e-09 Score=110.38 Aligned_cols=252 Identities=10% Similarity=0.009 Sum_probs=146.6
Q ss_pred CcchHHHHHHHHHHHcCCHHHHHHHHH-HHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCCCc--H-HHHHHH
Q 047407 5 QPPLLSAMVYDIYNRTGDLDLVKKALS-ALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPES--S-TIMELD 80 (294)
Q Consensus 5 qPP~~~~~v~~~y~~t~D~~fL~~~~p-~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prpes--~-~~~~~~ 80 (294)
.++++.++++.+++ + | ++++| .+++.++|-..+-.. .+ .+ .|.+....-+-+ + ..+...
T Consensus 387 ~~g~~l~~~~~~~~-~-d----~~~w~~~v~~al~~i~~~g~~---~~-~~-------~WEe~~g~~~~t~~~~~~AL~~ 449 (1020)
T 1ulv_A 387 ETAFPILLANQIGR-T-D----AGFYRNELKPAADYLVAAGPK---TP-QE-------RWEETGGYSTSTLASQIAALAA 449 (1020)
T ss_dssp HHHHHHHHHHHHTC-C-C----HHHHHHTHHHHHHHHHHHCSC---BS-BC-------TTSSCCBEEHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHh-c-C----HHHHHHHHHHHHHHHHHhCCC---CC-hh-------hhcccCCcCHHHHHHHHHHHHH
Confidence 35777888888765 4 5 77888 888888875543110 00 01 122211110000 0 013467
Q ss_pred HHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccC-----CCeEEeeecCCCccc-chhhhc---cCCCCccceehhhh
Q 047407 81 IASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKE-----KGQWLDYWISNRTSS-QECQRW---KGSNQSNNAFTSNF 151 (294)
Q Consensus 81 lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee-----~g~y~D~~~~~~~~~-~~~~~~---~~~~~~~~~~~s~~ 151 (294)
+++||+.+|+.+.++.|++.|+++++.|++.+|+++ .+.|.-.....+... ..++.- ..-...+...++.+
T Consensus 450 aa~lA~~~G~~~~a~~w~~~Ad~i~~~i~~~~w~~~g~~~~~g~f~r~~~dg~~~~~~~~~~~n~~~~~~~~~~lDas~l 529 (1020)
T 1ulv_A 450 AADIAGKNGDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGNGAGVHPENAVLDGGFL 529 (1020)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHEESSCSSTTSCEECSEESSSCTTSCCEEECSTTCCEEEGGGCCBGGGG
T ss_pred HHHHHHHcCChhHHHHHHHHHHHHHHHHHHhCCCCcccccccCeeEEEecCCCcccccccccccccccCCCCCeeeHHHH
Confidence 899999999999999999999999999999999998 777764432211000 000000 00012334556677
Q ss_pred HHHhccCCCCchHHHHHHHHHhhhcCcc--cccccccccCCC--------CCCCC--C-CCCCchHHHHHHHHHHhcCcH
Q 047407 152 VPIWIDLFNSNTCIVEKVKKSFQSSGFL--GAAGIATSLTRS--------REQWD--F-PNGWAPLQHMIVEGLAKSGLQ 218 (294)
Q Consensus 152 ~PL~~g~~~~~~~~~~~~~~~l~~~~~~--~~~Gi~ts~~~~--------~~~W~--g-PnvW~~~~~l~~~gL~~yg~~ 218 (294)
.++++|+++++..++.+.++.+.+. +. .++|..-.-|++ |.-|. | .|+|+.++..+++.+.+.|..
T Consensus 530 ~l~~~G~~~~~dpr~~~Tl~~i~~~-L~~~~~~G~~~~RY~~D~Y~~~~dG~~~~~~g~g~~W~l~T~wlae~~~~~G~~ 608 (1020)
T 1ulv_A 530 EFVRLGVKAPADPYVADSLAETDAS-ISQETPGGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPLLSGERGEYALANGQD 608 (1020)
T ss_dssp HHHHTTSSCTTCHHHHHHHHHHHHH-HEEEETTEEEECSBTTCCCSCCTTSCCCSSCCCCCBCTHHHHHHHHHHHHTTCC
T ss_pred HHHHhCCCCCCcHHHHHHHHHHHHH-hcccCCCCceeecCCccccccccCCCcccCCCCCChHHHHHHHHHHHHHHhhHH
Confidence 7778999988765545445544321 11 233421111222 23444 2 469999999999999988873
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccC--CccCCCcccc-CCCCccccHHHHHHHHHHh
Q 047407 219 EAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKC--GDIGGGGEYI-PQTGFGWSNGVVLAFLEEF 283 (294)
Q Consensus 219 ~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~--~~~g~gGey~-~~~~fgWT~~v~L~~~~~~ 283 (294)
|+++.+..+.. -...|.|.|.|++... ......|+.. .....+||++.+|.++...
T Consensus 609 -----A~~~~~~l~~~----a~~~GllpEq~~~g~~~~~~~~~tG~p~~g~~PqaWSha~~I~~~~~l 667 (1020)
T 1ulv_A 609 -----ALPYLETMHSA----ANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGV 667 (1020)
T ss_dssp -----CHHHHHHHHHT----SCTTCCCCSCBBCCSSCCSSCCCBTSBCSSCBSCHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHh----ccccCCcceeecccccccccCCcCCccccCCcHHHHHHHHHHHHHHHH
Confidence 55555444432 2335899999997210 0001123333 3456799999888777643
No 12
>3p2c_A Putative glycosyl hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; HET: MSE PGE; 1.60A {Bacteroides ovatus} SCOP: a.102.1.8 PDB: 3on6_A*
Probab=98.94 E-value=4e-08 Score=91.11 Aligned_cols=240 Identities=13% Similarity=0.153 Sum_probs=137.3
Q ss_pred HHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHhhCCCcc-----cc-cc-----------CCCC---eeeceeeecCCC
Q 047407 9 LSAMVYDIYNRTGDLDLVK-KALSALLKEHQFWNSGIHKV-----NI-QE-----------DHGR---NHTLSRYYGMWN 67 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~-~~~p~l~k~~~~w~~~r~~~-----~~-~~-----------~~G~---~~~l~~y~~~~~ 67 (294)
+..+.+.||+.|||.+|+. +.+.++++-++-|....++. .. +. +.|. ..+|. ..
T Consensus 168 ~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli-----~S 242 (463)
T 3p2c_A 168 PLRLAYHYWKTTGDASIFNEEWIQAITNVLKTFKEQQRKDGVGPYKFQRKTERALDTVSNDGLGAPVKPVGLI-----VS 242 (463)
T ss_dssp HHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTCSSSSCSCCCBCCBSCGGGSCHHHHTCSCCCCSSCC-----BC
T ss_pred HHHHHHHHHHhhCChhhhcHHHHHHHHHHHHHHHHHhccCCCCCceEeecCCCCCcccCCCCcCCCcCCCCce-----ec
Confidence 4578889999999988774 55567777777777654321 00 00 0000 00111 11
Q ss_pred CCCCC--c----HHH--------HHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHhhccccC--CCeEEeeecCCCcc
Q 047407 68 KLRPE--S----STI--------MELDIASMAQIV-GDNRTAESFLKAAQARKQAINSVFWNKE--KGQWLDYWISNRTS 130 (294)
Q Consensus 68 ~prpe--s----~~~--------~~~~lA~la~~l-G~~~~a~~~~~~A~~l~~ai~~~lWdee--~g~y~D~~~~~~~~ 130 (294)
.-||. + |.- ....+|+|++.+ |+.+.|+++++.|++++++|.++...+. -|..|-|.++..
T Consensus 243 ~FRPSDDa~~~~~~iPsN~~a~v~L~~aaei~~~l~~d~~la~~~~~lA~eIr~gI~k~gvv~~p~~G~iyAyEVDG~-- 320 (463)
T 3p2c_A 243 SFRPSDDATTLQFLVPSNFFAVSSLRKAAEILEKVNKKTALSKECKDLAQEVETALKKYAVYNHPKYGKIYAFEVDGF-- 320 (463)
T ss_dssp SBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSS--
T ss_pred CCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCEecCCCCceEEEEEEecC--
Confidence 22442 1 100 234577888877 6677899999999999999999999863 355666766531
Q ss_pred cchhhhccCCCC---ccceehhhhHHHhccCCCCchHHHHHHHHHhhhcCcccccccccccC-CCCCCCCCC-CCCchHH
Q 047407 131 SQECQRWKGSNQ---SNNAFTSNFVPIWIDLFNSNTCIVEKVKKSFQSSGFLGAAGIATSLT-RSREQWDFP-NGWAPLQ 205 (294)
Q Consensus 131 ~~~~~~~~~~~~---~~~~~~s~~~PL~~g~~~~~~~~~~~~~~~l~~~~~~~~~Gi~ts~~-~~~~~W~gP-nvW~~~~ 205 (294)
|.. .+...+|-+..-++|.++.+..+..+..+.+.+.. .|+-...+.. .-|+---+| |+||--.
T Consensus 321 ---------Gs~~lmDDaNvPSLLslPylGf~~~dDpiYqNTrk~IlS~~--NPyY~~G~~~~GiG~PH~~~~~~Wpmsl 389 (463)
T 3p2c_A 321 ---------GNHHLMDDANVPSLLAMPYLGDVNVNDPIYQNTRRFVWSED--NPYFFKGKAGEGIGGPHIGYDMVWPMSI 389 (463)
T ss_dssp ---------SCEECCCCSSSSCSTTHHHHTSSCTTCHHHHHHHHHHTSTT--STTEEECSSCEEECCTTTCTTEECHHHH
T ss_pred ---------CCccCCCCCCchhHHHHHHcCCCCCCCHHHHHHHHHHHhcc--CCceeccCccccCCCCCCCCCCchHHHH
Confidence 221 12222444444467888877666677777775432 2221111000 001111123 4887655
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHHh
Q 047407 206 HMIVEGLAKSGLQEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 283 (294)
Q Consensus 206 ~l~~~gL~~yg~~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~~ 283 (294)
. +++|..-... .+.++.+..+++. ..+|.|+|.+|+.++. .+ ...-|+|+|+.+..++-++
T Consensus 390 l--~~~lTs~d~~----Ei~~~L~~l~~t~----~gtGlmHEsvd~~~~~------~~-TR~WFaWaNs~F~elil~l 450 (463)
T 3p2c_A 390 M--MKAFTSQNDA----EIKTCIKMLMDTD----AGTGFMHESFHKDNPK------KF-TRAWFAWQNTLFGELILKL 450 (463)
T ss_dssp H--HHHHTCCCHH----HHHHHHHHHHHTS----TTSSSCCSEEETTEEE------EE-ECSCBHHHHHHHHHHHHHH
T ss_pred H--HHHhccCCHH----HHHHHHHHHHhcC----CCCCeeeeeECCCCCC------cC-CCCchhhhhHHHHHHHHHH
Confidence 4 5666543333 4555553333322 3589999999999632 23 3468999999987776543
No 13
>2vn4_A Glucoamylase; hydrolase, carbohydrate binding, glycoside hydrolase family 15, amyloglucosidase; HET: MAN NAG BTB; 1.85A {Hypocrea jecorina} PDB: 2vn7_A*
Probab=98.92 E-value=3.8e-08 Score=95.75 Aligned_cols=230 Identities=12% Similarity=0.099 Sum_probs=133.2
Q ss_pred HHHcCCHHHHHH-HHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCCCcHHH-----HHHHHHHHHHHhCC
Q 047407 17 YNRTGDLDLVKK-ALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPESSTI-----MELDIASMAQIVGD 90 (294)
Q Consensus 17 y~~t~D~~fL~~-~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prpes~~~-----~~~~lA~la~~lG~ 90 (294)
+..+++.++++. ++|.+++..+|-...-+.. + .|. |.....+ --|.. +....++||+.+|+
T Consensus 142 ~~~~g~~~~~~~~~w~~v~~~l~~v~~~w~~~---d-~dl-------WEer~g~--~~~T~~~~~~aL~~aa~lA~~~g~ 208 (599)
T 2vn4_A 142 LINNNYQSTVSNVIWPIVRNDLNYVAQYWNQT---G-FDL-------WEEVNGS--SFFTVANQHRALVEGATLAATLGQ 208 (599)
T ss_dssp HHHTTCHHHHHHHTHHHHHHHHHHHHHHTTSC---E-ECT-------TSCCEEE--EHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhCCcccccHHHHHHHHHHHHHHHHhCCCC---C-CCe-------eeecCCc--chHHHHHHHHHHHHHHHHHHHcCC
Confidence 567899988876 7899999988755443210 0 011 2211111 01111 33467899999998
Q ss_pred chhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhhccCCCCccceehhhhHHHhccCCC----------
Q 047407 91 NRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQRWKGSNQSNNAFTSNFVPIWIDLFN---------- 160 (294)
Q Consensus 91 ~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~PL~~g~~~---------- 160 (294)
+ ++.|++.|+++++.| +.+||++ |.|.-...... .....+.++.++....+..|
T Consensus 209 ~--~~~w~~~ad~i~~~i-~~~w~~~-g~f~~~~~~~~------------~~~~~lDas~LL~~~~~f~~~~~~~~~~~~ 272 (599)
T 2vn4_A 209 S--GSAYSSVAPQVLCFL-QRFWVSS-GGYVDSNINTN------------EGRTGKDVNSVLTSIHTFDPNLGCDAGTFQ 272 (599)
T ss_dssp C--CHHHHHHHHHHHHHH-GGGEETT-TTEECSEESSC------------CCCCCCBTHHHHHHHHSCCGGGTTCTTTTC
T ss_pred C--HHHHHHHHHHHHHHH-HhhcCCC-CCEEEEecCcc------------CCCCCcCHHHHhhhhccCCccccccccCCC
Confidence 7 688999999999999 8899998 88875432110 01223444555444334322
Q ss_pred CchHHHHHHHHHhhhc---Ccccccccccc------cCCCCCCCCCCCCCchHHHHHHHHHHh-----------------
Q 047407 161 SNTCIVEKVKKSFQSS---GFLGAAGIATS------LTRSREQWDFPNGWAPLQHMIVEGLAK----------------- 214 (294)
Q Consensus 161 ~~~~~~~~~~~~l~~~---~~~~~~Gi~ts------~~~~~~~W~gPnvW~~~~~l~~~gL~~----------------- 214 (294)
++..++...++.+.+. .+-...|++.. -|..+. ++|-|.|...+..+++.|.+
T Consensus 273 p~dpr~l~Tl~ai~~~L~~~y~i~~g~~~g~~~~v~RY~~D~-y~Gg~pw~lcT~w~ae~l~~a~~~~~~~g~i~~~~~~ 351 (599)
T 2vn4_A 273 PCSDKALSNLKVVVDSFRSIYGVNKGIPAGAAVAIGRYAEDV-YYNGNPWYLATFAAAEQLYDAIYVWKKTGSITVTATS 351 (599)
T ss_dssp TTSHHHHHHHHHHHHHHHTTCGGGTTCCTTSCCCCCSBTTCC-GGGCCCBHHHHHHHHHHHHHHHHHHHHHTEEEECTTT
T ss_pred CCCHHHHHHHHHHHHHHHhhcCcCCCCcCCceeEEEeCCCCC-CCCCCcHHHHHHHHHHHHHHHHHhhhccCceeeccch
Confidence 2433333334444321 01112222211 122222 35677999999999998653
Q ss_pred ------------cCcH--------HHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHH
Q 047407 215 ------------SGLQ--------EAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNG 274 (294)
Q Consensus 215 ------------yg~~--------~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~ 274 (294)
.|.. +..+...+.|..+++.+...-...|.|.|+||+.+|.. ......+||.+
T Consensus 352 ~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~a~~~GllsEqvd~~~G~~-------~gn~PlawSha 424 (599)
T 2vn4_A 352 LAFFQELVPGVTAGTYSSSSSTFTNIINAVSTYADGFLSEAAKYVPADGSLAEQFDRNSGTP-------LSALHLTWSYA 424 (599)
T ss_dssp HHHHHHHSTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCCSEECTTTCCE-------ESSSSCHHHHH
T ss_pred hHHHhhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCCCcc-------CCcchHHHHHH
Confidence 3311 11122334566777666543344699999999986432 22456899999
Q ss_pred HHHHHHHHh
Q 047407 275 VVLAFLEEF 283 (294)
Q Consensus 275 v~L~~~~~~ 283 (294)
.+|..+...
T Consensus 425 ~lI~a~~~~ 433 (599)
T 2vn4_A 425 SFLTATARR 433 (599)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887764
No 14
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=98.92 E-value=1.7e-08 Score=96.00 Aligned_cols=244 Identities=10% Similarity=0.074 Sum_probs=136.3
Q ss_pred CcchHHHHHHHHHHHcCCHHHH---------------HHHH-HHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCC
Q 047407 5 QPPLLSAMVYDIYNRTGDLDLV---------------KKAL-SALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNK 68 (294)
Q Consensus 5 qPP~~~~~v~~~y~~t~D~~fL---------------~~~~-p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~ 68 (294)
+|.+.+.+++.+++...+...+ +.++ |.+++-.+|-...-+.. + .| .|.....
T Consensus 146 ~~g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~p---d-~d-------lWEer~g 214 (492)
T 2fba_A 146 GPALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDST---G-FD-------LWEENQG 214 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSC---E-EC-------TTSCCEE
T ss_pred chhHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCC---C-CC-------CcCccCC
Confidence 4778888888777654433332 5666 77777777654432210 0 01 1221111
Q ss_pred CCCCcHHH-----HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhh---ccccCCCeEEeeec-CCCcccchhhhccC
Q 047407 69 LRPESSTI-----MELDIASMAQIVGDNRTAESFLKAAQARKQAINSV---FWNKEKGQWLDYWI-SNRTSSQECQRWKG 139 (294)
Q Consensus 69 prpes~~~-----~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~---lWdee~g~y~D~~~-~~~~~~~~~~~~~~ 139 (294)
+ --|.. +....++||+.+|+++.++.|++.|+.+++.|.+. +||++.+.|.-..- ..
T Consensus 215 ~--~~~T~~~~~~AL~~aa~lA~~~g~~~~a~~w~~~ad~i~~~I~~~~~~~w~~~~~~f~~~~~~~~------------ 280 (492)
T 2fba_A 215 R--HFFTSLVQQKALAYAVDIAKSFDDGDFANTLSSTASTLESYLSGSDGGFVNTDVNHIVENPDLLQ------------ 280 (492)
T ss_dssp C--CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHSTTTCCEETTTTEECSSHHHHH------------
T ss_pred C--ChHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEeccccc------------
Confidence 1 11211 33467899999999999999999999999999998 99999887753210 00
Q ss_pred CCCccceehhhhHHH-h-cc-------CCCCchHHHHHHHHHhhhcCcccc----cccccc----cCCCCCCCCC-----
Q 047407 140 SNQSNNAFTSNFVPI-W-ID-------LFNSNTCIVEKVKKSFQSSGFLGA----AGIATS----LTRSREQWDF----- 197 (294)
Q Consensus 140 ~~~~~~~~~s~~~PL-~-~g-------~~~~~~~~~~~~~~~l~~~~~~~~----~Gi~ts----~~~~~~~W~g----- 197 (294)
+...+.+.++.++.. . ++ +.+++..++...++.+.+. +... +|++.. -|. +..++|
T Consensus 281 ~~~~~~lDas~Ll~~~~~f~~~~~~~~~~~p~Dpr~l~Tl~ai~~~-L~~~~pin~~~~~g~~v~RY~-~D~y~g~~~~~ 358 (492)
T 2fba_A 281 QNSRQGLDSATYIGPLLTHDIGESSSTPFDVDNEYVLQSYYLLLED-NKDRYSVNSAYSAGAAIGRYP-EDVYNGDGSSE 358 (492)
T ss_dssp TTSCCSCCTHHHHHHHHHSCTTSCCCCSCCTTCHHHHHHHHHHHHH-HHHHCGGGTTCSSCCCCCSCT-TCCBCSSSBSS
T ss_pred cCCCCcccHHHHHHHHhccccccccCCccCCCCHHHHHHHHHHHHH-HhcccCccccCcceeEEEeCC-CCCCCCCCccC
Confidence 011223445554443 2 33 4666544444444444321 1111 111111 122 222354
Q ss_pred CCCCchHHHHHHHHH--------HhcC-------------------------c------------H---HHHHHHHHHHH
Q 047407 198 PNGWAPLQHMIVEGL--------AKSG-------------------------L------------Q---EAKSMAQDIAM 229 (294)
Q Consensus 198 PnvW~~~~~l~~~gL--------~~yg-------------------------~------------~---~~~~~A~~la~ 229 (294)
-|.|...+..+++.| .+.| . . ...+...+-|.
T Consensus 359 g~pw~lcT~w~ae~ly~al~~~~~~~g~~~i~~~~~~f~~~~~~~~~~~~~G~~~~~~~~y~~~~~~~~~~~~~~~~~A~ 438 (492)
T 2fba_A 359 GNPWFLATAYAAQVPYKLAYDAKSASNDITINKINYDFFNKYIVDLSTINSAYQSSDSVTIKSGSDEFNTVADNLVTFGD 438 (492)
T ss_dssp CCCBHHHHHHHHHHHHHHHHHHHHHTCCEEEEGGGHHHHHHHTCCGGGTCTTGGGSSEEEECTTSHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHhcCceecchhhHHHHHhhhhhhccccccccccccceeccCchhHHHHHHHHHHHHH
Confidence 479999999999944 2333 1 0 00000122344
Q ss_pred HHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHH
Q 047407 230 RWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEE 282 (294)
Q Consensus 230 ~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~ 282 (294)
.+++.+...-...|.|.|+||+.+|... .....+||.+.+|..+..
T Consensus 439 ~~l~~~~~~~~~~GllsEq~d~~tG~~~-------ga~PltwSha~li~aa~~ 484 (492)
T 2fba_A 439 SFLQVILDHINDDGSLNEQLNRYTGYST-------GAYSLTWSSGALLEAIRL 484 (492)
T ss_dssp HHHHHHHHHSCTTSCCCSEECTTTCCEE-------SSTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCccccCCCCCCCC-------CccchHHHHHHHHHHHHH
Confidence 5555444333456999999999875432 245689999999887654
No 15
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=98.85 E-value=1.6e-07 Score=88.74 Aligned_cols=224 Identities=13% Similarity=0.131 Sum_probs=130.9
Q ss_pred HHHcCCHHHHHH-HHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCCCcHHH-----HHHHHHHHHHHhCC
Q 047407 17 YNRTGDLDLVKK-ALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPESSTI-----MELDIASMAQIVGD 90 (294)
Q Consensus 17 y~~t~D~~fL~~-~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prpes~~~-----~~~~lA~la~~lG~ 90 (294)
+..+++.++++. ++|.+++-.+|-..+-+.. + .|. |.....+ --|.. +....++||+.+|+
T Consensus 141 l~~~g~~~~~~~~~w~~i~~~l~~v~~~w~~p---d-~dl-------WEer~g~--~~~T~~~~~~AL~~aa~lA~~~g~ 207 (472)
T 1gai_A 141 LLDNGYTSAATEIVWPLVRNDLSYVAQYWNQT---G-YDL-------WEEVNGS--SFFTIAVQHRALVEGSAFATAVGS 207 (472)
T ss_dssp HHHTTCHHHHHHTHHHHHHHHHHHHHHHTTSC---E-ECT-------TSCCEEE--EHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHcCCccccchhHHHHHHHHHHHHHHhcCCC---C-CCC-------CcccCCC--CHHHHHHHHHHHHHHHHHHHHcCC
Confidence 567888888876 8888888888755442210 0 011 2111111 01111 33567899999998
Q ss_pred chhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCcccchhhhccCCCCccceehhhhHHHhccCCCC---------
Q 047407 91 NRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSSQECQRWKGSNQSNNAFTSNFVPIWIDLFNS--------- 161 (294)
Q Consensus 91 ~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~PL~~g~~~~--------- 161 (294)
+ ++.|++.|+++++.| +.+|| |.|.-....+ ..+.+.++.++....+. ++
T Consensus 208 ~--~~~w~~~ad~I~~~i-~~~w~---g~f~~~~~~~--------------~~~~lDas~LL~~~~~f-~p~~~~~~~~~ 266 (472)
T 1gai_A 208 S--CSWCDSQAPQILCYL-QSFWT---GSYILANFDS--------------SRSGKDTNTLLGSIHTF-DPEAGCDDSTF 266 (472)
T ss_dssp C--CHHHHHHHHHHHHHH-GGGBC---SSSBCSEESC--------------CSCCCCTHHHHHHHTTC-CTTCCSCTTTT
T ss_pred c--HHHHHHHHHHHHHHH-HhhcC---CceEEeecCC--------------CCCCcCHHHHHhhhccC-CccccccccCC
Confidence 7 788999999999999 88998 4554332111 11233445554444454 33
Q ss_pred --chHHHHHHHHHhhhcCcc----cccccccc---c---CCCCCCCCCCCCCchHHHHHHHHHHh---------------
Q 047407 162 --NTCIVEKVKKSFQSSGFL----GAAGIATS---L---TRSREQWDFPNGWAPLQHMIVEGLAK--------------- 214 (294)
Q Consensus 162 --~~~~~~~~~~~l~~~~~~----~~~Gi~ts---~---~~~~~~W~gPnvW~~~~~l~~~gL~~--------------- 214 (294)
+..++...++.+.+. +. ...|++.. . |..+ .++|-|.|...+..+++.|.+
T Consensus 267 ~p~Dpr~l~Tl~ai~~~-L~~~y~i~~~~~~g~g~~v~RY~~D-~y~gg~pw~lcT~wlae~l~~a~~~~~~~~~i~~~~ 344 (472)
T 1gai_A 267 QPCSPRALANHKEVVDS-FRSIYTLNDGLSDSEAVAVGRYPED-SYYNGNPWFLCTLAAAEQLYDALYQWDKQGSLEITD 344 (472)
T ss_dssp CTTSHHHHHHHHHHHHT-TTTTCGGGTTCCTTSCCCCCSCTTC-CGGGSCCBHHHHHHHHHHHHHHHHHHHHHTEEEECT
T ss_pred CCCCHHHHHHHHHHHHH-HHHhcCcCCCCcCcccceEEeCCCC-CCCCCCcHHHHHHHHHHHHHHHHHHhhccCceeecc
Confidence 444444555555432 22 12222211 1 2222 235678999999999999863
Q ss_pred --------------cCc--------HHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCcccc
Q 047407 215 --------------SGL--------QEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWS 272 (294)
Q Consensus 215 --------------yg~--------~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT 272 (294)
.|. .+..+-..+-|..+++.+...-...|.|.|+||+.+|... .....+||
T Consensus 345 ~~~~ff~~~~~~~~~G~~~~~~~~~~~~~~~~~~~A~~~~e~~~~~~~~~GllsEq~d~~tG~~~-------gn~PlawS 417 (472)
T 1gai_A 345 VSLDFFKALYSGAATGTYSSSSSTYSSIVSAVKTFADGFVSIVETHAASNGSLSEQFDKSDGDEL-------SARDLTWS 417 (472)
T ss_dssp TTHHHHHHHCTTCCSEEEETTSHHHHHHHHHHHHHHHHHHHHHHHHSCTTCCCCSEECTTTCCEE-------SSSSCHHH
T ss_pred hhHHHHHhhcccccccccccCchhHHHHHHHHHHHHHHHHHHHHHHCCCCCCcccccCCCCCCCC-------CccchHHH
Confidence 330 0110112233556666655444457999999999864332 24568999
Q ss_pred HHHHHHHHHHh
Q 047407 273 NGVVLAFLEEF 283 (294)
Q Consensus 273 ~~v~L~~~~~~ 283 (294)
.+.+|..+...
T Consensus 418 ha~lI~aa~~l 428 (472)
T 1gai_A 418 YAALLTANNRR 428 (472)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888766
No 16
>3qt9_A Putative uncharacterized protein CPE0426; alpha-alpha six fold, glycoside hydrolase, mannosidase, HYDR; HET: YDR; 2.05A {Clostridium perfringens} SCOP: a.102.1.8 PDB: 3qt3_A* 2nvp_A
Probab=98.72 E-value=3.1e-07 Score=84.37 Aligned_cols=240 Identities=16% Similarity=0.184 Sum_probs=135.8
Q ss_pred HHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHhhCCCcc-----cc-c-----------cCCCC---eeeceeeecCCC
Q 047407 9 LSAMVYDIYNRTGDLDLVK-KALSALLKEHQFWNSGIHKV-----NI-Q-----------EDHGR---NHTLSRYYGMWN 67 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~-~~~p~l~k~~~~w~~~r~~~-----~~-~-----------~~~G~---~~~l~~y~~~~~ 67 (294)
+..+.+.||+.|||.+|+. +.+.++++-++-|...+++. .. + ++.|. ..+|.+ .
T Consensus 140 ~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~~q~~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli~-----S 214 (427)
T 3qt9_A 140 PVRLIHKYWKESGDETFFNYDIKKAFNMIIDLWRVEQYHREKSDYSFQRLNCSVTDTLSHEGLGTPVTYTGMTW-----S 214 (427)
T ss_dssp HHHHHHHHHHHHCCCTTCCHHHHHHHHHHHHHHHHGGGHHHHCCCCCBCSSSCGGGSCHHHHTCSCCCCCSSCC-----C
T ss_pred HHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCCceEeccCCCCCccccCCCCCCCcCCCCcee-----c
Confidence 4578889999999987663 44556666666666554321 00 0 00110 011111 2
Q ss_pred CCCCC--c----HHH--------HHHHHHHHHHHh-CCchhHHHHHHHHHHHHHHHHhhccccCC--CeEEeeecCCCcc
Q 047407 68 KLRPE--S----STI--------MELDIASMAQIV-GDNRTAESFLKAAQARKQAINSVFWNKEK--GQWLDYWISNRTS 130 (294)
Q Consensus 68 ~prpe--s----~~~--------~~~~lA~la~~l-G~~~~a~~~~~~A~~l~~ai~~~lWdee~--g~y~D~~~~~~~~ 130 (294)
.-||. + |.- ..+.+++|++.+ ++.+.|+++++.|++++++|.++...+.. |-.|-|.++..
T Consensus 215 ~FRPSDDa~~~~~~iPsN~~a~vaL~~~aei~~~l~~d~~La~~~~~la~eIr~aI~k~gvv~~p~~G~iyAyEVDG~-- 292 (427)
T 3qt9_A 215 GFRPSDDACEYGYLIPANMFAVVALRYISEIAEKVYKDEELKEKADSLREEIDNAIEKHGKVYKEGFGEVYAYETDGM-- 292 (427)
T ss_dssp SBCTTSCBCSSSEEHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEECSEECSS--
T ss_pred CCCCCCcccccCCCcHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccC--
Confidence 22442 1 100 234577788777 56778999999999999999999998742 45666766531
Q ss_pred cchhhhccCCCCc---cceehhhhHHHhccCCCCchHHHHHHHHHhhhcCcccccccccccC-CCCCCCCCC-CCCchHH
Q 047407 131 SQECQRWKGSNQS---NNAFTSNFVPIWIDLFNSNTCIVEKVKKSFQSSGFLGAAGIATSLT-RSREQWDFP-NGWAPLQ 205 (294)
Q Consensus 131 ~~~~~~~~~~~~~---~~~~~s~~~PL~~g~~~~~~~~~~~~~~~l~~~~~~~~~Gi~ts~~-~~~~~W~gP-nvW~~~~ 205 (294)
|... +...+|-+..-++|.++.+..+..+..+.+.++. .|+-...... .-|+---+| |+||--.
T Consensus 293 ---------Gs~~lMDDaNvPSLLslPylGf~~~dDpiYqNTrk~IlS~~--NPyy~~G~~~~GIG~PH~~~~~~Wpmsl 361 (427)
T 3qt9_A 293 ---------GNYNFMDDANVPSLLSIPYLEYKGIEDEVYQNTRKFILSKN--NRFFFEGKAAKGIGSPHTPDQYIWHIAL 361 (427)
T ss_dssp ---------SCEECCCCSSSSCSTTHHHHTSSCTTCHHHHHHHHHHTSTT--STTEEECSSCEEECCTTSCTTEEEHHHH
T ss_pred ---------CCccccCCCCchhHHHHHHcCCCCCCCHHHHHHHHHHhccc--CCceeccCccCcCCCCCCCCCCchHHHH
Confidence 2210 1122444444467888877666677777775432 2221111000 001111223 4776544
Q ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHHh
Q 047407 206 HMIVEGLAKSGLQEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEEF 283 (294)
Q Consensus 206 ~l~~~gL~~yg~~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~~ 283 (294)
++++|..-... .+.++.+..+++. ..+|.|+|.+|+.++. .|. ..-|+|.|+++-.++-++
T Consensus 362 --~~~~lTs~d~~----Ei~~~L~~l~~t~----~gtGlmHEsvd~~~~~------~~T-R~WFaWaN~lF~elil~l 422 (427)
T 3qt9_A 362 --SMQGLTTNNQE----EIDQLIKLLKETD----AGTGYMHEGFHVDDPT------KFT-RDWFAWSNSLFSHFIYEK 422 (427)
T ss_dssp --HHHHHTCCCHH----HHHHHHHHHHHTS----TTSSSCCSEEETTEEE------EES-CSCBHHHHHHHHHHHHHH
T ss_pred --HHHHhhcCCHH----HHHHHHHHHHhcC----CCCCeeeeeECCCCCC------ccC-CCcchhhhHHHHHHHHHH
Confidence 46666554333 4555553333322 3479999999998742 233 467999999988776654
No 17
>3qry_B Putative uncharacterized protein; alpha-alpha six fold, glycoside hydrolase, mannosidase, 1- deoxymannojirimycin, hydrolase; HET: DMJ; 1.75A {Streptococcus pneumoniae} SCOP: a.102.1.0 PDB: 3qpf_A* 3qsp_A*
Probab=98.63 E-value=8.4e-07 Score=81.52 Aligned_cols=239 Identities=13% Similarity=0.229 Sum_probs=135.7
Q ss_pred HHHHHHHHHHHcCCHHHHH-HHHHHHHHHHHHHhhCCCccc----c-cc-----------CCCC---eeeceeeecCCCC
Q 047407 9 LSAMVYDIYNRTGDLDLVK-KALSALLKEHQFWNSGIHKVN----I-QE-----------DHGR---NHTLSRYYGMWNK 68 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~-~~~p~l~k~~~~w~~~r~~~~----~-~~-----------~~G~---~~~l~~y~~~~~~ 68 (294)
+..+.+.||+.|||.+|+. +.+.++++-++-|...++... . +. +.|. ..+|. ...
T Consensus 139 ~l~La~~y~~~Tgd~~~f~~~w~~a~~~il~~~~~eq~~~~s~Y~f~R~t~~~tdtl~~~G~G~pv~~tGli-----~S~ 213 (426)
T 3qry_B 139 PLQLAYLLWKETGETSQFDEIFVAATKEILHLWTVEQDHKNSPYRFVRDTDRKEDTLVNDGFGPDFAVTGMT-----WSA 213 (426)
T ss_dssp HHHHHHHHHHHHCCCTTCSHHHHHHHHHHHHHHHHTTSGGGCCCCCEECCSCGGGSCHHHHTCSCCCCCSSC-----CCS
T ss_pred HHHHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHhccCCCCceeeecCCCCCccccCCCCCCCcCCCCce-----ecC
Confidence 4578889999999987763 555667777776776543210 0 00 0010 01111 122
Q ss_pred CCCC--c----HHH--------HHHHHHHHHHH---hCCchhHHHHHHHHHHHHHHHHhhccccCC--CeEEeeecCCCc
Q 047407 69 LRPE--S----STI--------MELDIASMAQI---VGDNRTAESFLKAAQARKQAINSVFWNKEK--GQWLDYWISNRT 129 (294)
Q Consensus 69 prpe--s----~~~--------~~~~lA~la~~---lG~~~~a~~~~~~A~~l~~ai~~~lWdee~--g~y~D~~~~~~~ 129 (294)
-||. + |.- ....+|+|++. .|+.+.|+++++.|++++++|.++...+.. |-.|-|.++..
T Consensus 214 FRPSDDa~~~~~~iPsN~~~~v~L~~~aei~~~~~v~~d~~la~~~~~la~eIr~~I~k~gvv~h~~~g~iyAyEVDG~- 292 (426)
T 3qry_B 214 FRPSDDCCQYSYLIPSNMFAVVVLGYVQEIFAALNLADSQSVIADAKRLQDEIQEGIKNYAYTTNSKGEKIYAFEVDGL- 292 (426)
T ss_dssp BCTTSSBCSSSEEHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHSEEECTTCCEEECSEECSS-
T ss_pred CCCCCcccccCCCcHHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHHHHHHhcEecCCCcceEEEEEeccC-
Confidence 2442 1 100 23456777773 477778999999999999999999998743 45566766531
Q ss_pred ccchhhhccCCCCc---cceehhhhHHHhccCCCCchHHHHHHHHHhhhcCcccccccccccC-CCCCCCCCC-CCCchH
Q 047407 130 SSQECQRWKGSNQS---NNAFTSNFVPIWIDLFNSNTCIVEKVKKSFQSSGFLGAAGIATSLT-RSREQWDFP-NGWAPL 204 (294)
Q Consensus 130 ~~~~~~~~~~~~~~---~~~~~s~~~PL~~g~~~~~~~~~~~~~~~l~~~~~~~~~Gi~ts~~-~~~~~W~gP-nvW~~~ 204 (294)
|... +...+|-+..-++|.++.+..+..+..+.+.++. .|+-...+.. .-|+---+| |+||--
T Consensus 293 ----------Gs~~lmDDaNvPSLLslPylGf~~~dDpiYqNTrk~IlS~~--NPyy~~G~~~~GiG~PH~~~~~~Wpms 360 (426)
T 3qry_B 293 ----------GNASIMDDPNVPSLLAAPYLGYCSVDDEVYQATRRTILSSE--NPYFYQGEYASGLGSSHTFYRYIWPIA 360 (426)
T ss_dssp ----------SCBCCCCCSSSSCSTTTTTTTSSCTTCHHHHHHHHHHTSTT--STTEEECSSCEEECCTTSCTTEECHHH
T ss_pred ----------CCccccCCCCchhHHHHHHcCCCCCCCHHHHHHHHHHhccc--CCceeccCccCcCCCCCCCCCCchHHH
Confidence 2211 1222444444467888877666677777775432 2221111000 001111123 478755
Q ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhcCccceeeccccCCccCCCccccCCCCccccHHHHHHHHHH
Q 047407 205 QHMIVEGLAKSGLQEAKSMAQDIAMRWINTNYVAYKETGAMHEKYDVEKCGDIGGGGEYIPQTGFGWSNGVVLAFLEE 282 (294)
Q Consensus 205 ~~l~~~gL~~yg~~~~~~~A~~la~~~~~~~~~~~~~~g~~~E~Y~~~~~~~~g~gGey~~~~~fgWT~~v~L~~~~~ 282 (294)
. ++++|..-... .+.++.+..+++. ..+|.|+|.+|+.++. .|. ..-|+|.|+++-.++-+
T Consensus 361 l--~~~~lTs~d~~----Ei~~~L~~l~~t~----~gtGlmHEsvd~~~~~------~~T-R~WFaWaN~lF~elil~ 421 (426)
T 3qry_B 361 L--SIQGLTTRDKA----EKKFLLDQLVACD----GGTGVMHESFHVDDPT------LYS-REWFSWANMMFCELVLD 421 (426)
T ss_dssp H--HHHHHTCSCHH----HHHHHHHHHHHTS----TTSSSCCSEEETTEEE------EEE-CSCCHHHHHHHHHHHHH
T ss_pred H--HHHHHhCCCHH----HHHHHHHHHHhcC----CCCCeeeeeECCCCCC------ccC-CCchhhhhHHHHHHHHH
Confidence 4 46777654333 4555543333322 3479999999998742 333 46799999998777654
No 18
>2rdy_A BH0842 protein; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.03A {Bacillus halodurans c-125}
Probab=95.75 E-value=0.041 Score=55.25 Aligned_cols=93 Identities=11% Similarity=0.054 Sum_probs=57.9
Q ss_pred hHHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCC----------CCCcHH-
Q 047407 8 LLSAMVYDIYNRTGDLDLVKK-ALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKL----------RPESST- 75 (294)
Q Consensus 8 ~~~~~v~~~y~~t~D~~fL~~-~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~p----------rpes~~- 75 (294)
.++.++|.||+.|+|++||++ .||.|+...+||.+.-. .+++|....... ..+.+.+ ....|.
T Consensus 452 wla~~lw~yy~~TgD~~fL~~~~~p~l~e~A~F~~~~l~----~~~~g~y~i~p~-~sPE~~~~~~g~~~~~~~n~tytn 526 (803)
T 2rdy_A 452 WLTQHLWEHYTFGEDEAYLRDTAYPIMKEAALFCLDWLI----ENEAGYLVTSPS-TSPEQRFRIGEKGYAVSSATTMDL 526 (803)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHTHHHHHHHHHHHHHHHCE----ECTTSCEECSSB-CBTTBCEEETTEEECCBSCCHHHH
T ss_pred HHHHHHHHHHHhhCCHHHHHhhchHHHHHHHHHHHHhhE----ECCCCcEEECCC-CcccccccCCCcccccccChHHHH
Confidence 456789999999999999998 89999999999987532 133443211111 1111110 001222
Q ss_pred ----HHHHHHHHHHHHhCCch-hHHHHHHHHHHHH
Q 047407 76 ----IMELDIASMAQIVGDNR-TAESFLKAAQARK 105 (294)
Q Consensus 76 ----~~~~~lA~la~~lG~~~-~a~~~~~~A~~l~ 105 (294)
+....+.++++.||..+ ..++|++.++++.
T Consensus 527 ~~~~~~l~~a~~a~~~Lg~~~~~~~~w~~~~~~L~ 561 (803)
T 2rdy_A 527 SLIAECFDNCIQAAKRLSIDEDFVKALSDAKQRLL 561 (803)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHTBC
T ss_pred HHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHhcCC
Confidence 13345677889999654 4577777776664
No 19
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=95.20 E-value=0.22 Score=45.64 Aligned_cols=85 Identities=13% Similarity=0.242 Sum_probs=50.8
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCCC----cHHH--HHHHHHHHHHHhCCchhHH
Q 047407 22 DLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPE----SSTI--MELDIASMAQIVGDNRTAE 95 (294)
Q Consensus 22 D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prpe----s~~~--~~~~lA~la~~lG~~~~a~ 95 (294)
+.+||+.-+ ...+.||...- + |++| +...+.+....|-|. .+.. +...+|..++.+|+ .
T Consensus 7 ~~~~l~~~~---~~~l~fw~~~~--~---D~~G---Gf~~~l~~dg~~~~~~~k~l~~n~r~i~~~a~a~~~~g~----~ 71 (402)
T 3gt5_A 7 SADFLRTHI---SDTMAFYHPRC--I---DSAG---GFFHYFRDDGSIYNATHRHLVSSTRFVFNYAMAYLQFGT----A 71 (402)
T ss_dssp SHHHHHHHH---HHHHHHHTTTT--B---CTTS---SBCCEECTTSCEEESSEEEHHHHHHHHHHHHHHHHHHCC----H
T ss_pred CHHHHHHHH---HHHHHHHHhcC--C---CCCc---CeeeEECCCCCCCCCCchhHHHHHHHHHHHHHHHHhhCC----h
Confidence 457777665 45667897542 1 4455 343333333333222 1221 23356666777775 4
Q ss_pred HHHHHHHHHHHHHHhhccccCCCeEE
Q 047407 96 SFLKAAQARKQAINSVFWNKEKGQWL 121 (294)
Q Consensus 96 ~~~~~A~~l~~ai~~~lWdee~g~y~ 121 (294)
.|.+.|++..+-|.+.+||++.|.|+
T Consensus 72 ~~l~~A~~~~~fl~~~~~d~~~Gg~~ 97 (402)
T 3gt5_A 72 EYLDAVHHGLSYVRDVHRNPATGGYA 97 (402)
T ss_dssp HHHHHHHHHHHHHHHTTBCTTTSCBC
T ss_pred HHHHHHHHHHHHHHHhCccCCCCcEE
Confidence 58999999999999999998844444
No 20
>2eab_A Alpha-fucosidase; glycoside hydrolase; 1.12A {Bifidobacterium bifidum} PDB: 2eac_A* 2ead_A* 2eae_A*
Probab=94.89 E-value=0.051 Score=55.10 Aligned_cols=35 Identities=26% Similarity=0.518 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhh
Q 047407 8 LLSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNS 42 (294)
Q Consensus 8 ~~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~ 42 (294)
.++.++|+||+.|+|++||++.||.|+...+||..
T Consensus 510 Wla~~lweyy~yTgD~~fL~~~yPlLkeaA~F~~d 544 (899)
T 2eab_A 510 WILQNVYEAYEYSGDPALLDRVYALLKEESHFYVN 544 (899)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHh
Confidence 45677999999999999998899999999999998
No 21
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=91.30 E-value=0.49 Score=42.52 Aligned_cols=100 Identities=13% Similarity=0.069 Sum_probs=62.9
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHHHhhCCCccccccCCCCeeeceeeecCCCCCCCCcHH--HHHHHHHHH
Q 047407 8 LLSAMVYDIYNRTGDLDLVKKALSALLKE-HQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPESST--IMELDIASM 84 (294)
Q Consensus 8 ~~~~~v~~~y~~t~D~~fL~~~~p~l~k~-~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prpes~~--~~~~~lA~l 84 (294)
++++++...|+.|+|.++|+.+......- ...|... ..| ++ +|......-+.+.. .+...++++
T Consensus 96 ~~~la~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~--------~gG---Gi--~W~~~~~~~knaisN~~~~~~la~l 162 (349)
T 3k7x_A 96 WNALAAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDI--------MGG---GF--AWRRPQMYYKNTPVNAPFIILSCWL 162 (349)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSG--------GGS---CB--EEETTEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCC--------CCC---ce--EecCCCccccchhhHHHHHHHHHHH
Confidence 45677888899999999988655443332 2334211 012 23 34322101111111 144578889
Q ss_pred HHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeec
Q 047407 85 AQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWI 125 (294)
Q Consensus 85 a~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~ 125 (294)
++..|++ .|.+.|++.-+-+.+.|.|++ |.++|-..
T Consensus 163 ~~~tgd~----~Yl~~A~~~~~w~~~~l~d~~-g~v~Dg~~ 198 (349)
T 3k7x_A 163 YNELNET----KYLEWAMKTYEWQTKVLVRED-GFVEDGIN 198 (349)
T ss_dssp HHHHCCH----HHHHHHHHHHHHHHHHHBCTT-SCBCCEEC
T ss_pred HHHhCCH----HHHHHHHHHHHHHHhcCCCCC-CeEecCCc
Confidence 9999875 489999999999999999988 88887643
No 22
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=90.03 E-value=1.9 Score=38.97 Aligned_cols=103 Identities=16% Similarity=0.150 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH-HHHHhhCCCccccccCC-CCeeeceeeecCCCCCCC--CcH-------HHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALSALLKE-HQFWNSGIHKVNIQEDH-GRNHTLSRYYGMWNKLRP--ESS-------TIM 77 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p~l~k~-~~~w~~~r~~~~~~~~~-G~~~~l~~y~~~~~~prp--es~-------~~~ 77 (294)
.+|++...++.++|.++++.+...+... .+.-. +++ | ++....+....|.. +.+ .++
T Consensus 252 ~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~~~~---------d~~~g---g~~~~~~~~g~~~~~l~d~~~~~W~qaea 319 (402)
T 1fp3_A 252 AGWFLLRHSSRSGDAKLRAHVIDTFLLLPFRSGW---------DADHG---GLFYFQDADGLCPTQLEWAMKLWWPHSEA 319 (402)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTHHHHHHHB---------CTTTC---SBCSCEETTSCCCSSTTTTCEEHHHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHhc---------cCCCC---CEEEeecCCCCccccCcCCCcCcHHHHHH
Confidence 5566777778899998877655544444 33211 111 2 12211111122211 111 123
Q ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCC
Q 047407 78 ELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISN 127 (294)
Q Consensus 78 ~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~ 127 (294)
...+..+++..|+. .|.+.|.++.+.+.++|+|++.|.||+....+
T Consensus 320 ~~a~l~ly~~tgd~----~yl~~a~~~~~~~~~~f~D~~~G~w~~~~~~~ 365 (402)
T 1fp3_A 320 MIAFLMGYSESGDP----ALLRLFYQVAEYTFRQFRDPEYGEWFGYLNRE 365 (402)
T ss_dssp HHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHTBCTTTSSBCCEECTT
T ss_pred HHHHHHHHHHhCCH----HHHHHHHHHHHHHHHhCcCCCCCceEeeECCC
Confidence 45677788888863 58889999999999999999999999876543
No 23
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=88.46 E-value=5.7 Score=35.50 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCC-CCeeeceeeecCCCCCCC----C-c--H--HHHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDH-GRNHTLSRYYGMWNKLRP----E-S--S--TIME 78 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~-G~~~~l~~y~~~~~~prp----e-s--~--~~~~ 78 (294)
.++++..+++.|+|.++++.+...+....+. .- |++ | ++....+....|.. . . + .|+.
T Consensus 243 ~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~---g~------d~~~G---g~~~~~~~~g~~~~~~~~~~~~~W~qae~i 310 (388)
T 2gz6_A 243 AMWFIMDIARRKNDSKTINQAVDVVLNILNF---AW------DNEYG---GLYYFMDAAGHPPQQLEWDQKLWWVHLESL 310 (388)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH---HB------CTTTC---SBCSCEETTSCCCSCTTTTCEEHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH---hc------cCCCC---CEEEeecCCCCccccCcCCCcCcHHHHHHH
Confidence 4566777778899998877655555444332 11 111 2 12211222223321 1 1 1 2233
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCC
Q 047407 79 LDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISN 127 (294)
Q Consensus 79 ~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~ 127 (294)
..++.+++..|++ .|.+.++++.+-+.++|.|++.|.|++.-..+
T Consensus 311 ~a~~~ly~~tgd~----~yl~~a~~~~~~~~~~~~D~~~G~w~~~l~~~ 355 (388)
T 2gz6_A 311 VALAMGYRLTGRD----ACWAWYQKMHDYSWQHFADPEYGEWFGYLNRR 355 (388)
T ss_dssp HHHHHHHHHHCCH----HHHHHHHHHHHHHHHHHBCTTTSSBCCEECTT
T ss_pred HHHHHHHHHhCCH----HHHHHHHHHHHHHHHhCcCCCCCceEEeeCCC
Confidence 4566677887863 58888999999999999999999999876443
No 24
>1h54_A Maltose phosphorylase; hydrolase, maltose metabolism; 2.15A {Lactobacillus brevis} SCOP: a.102.1.4 b.30.5.3
Probab=88.33 E-value=0.77 Score=45.67 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHcCCHHHHHH-HHHHHHHHHHHHhhC
Q 047407 9 LSAMVYDIYNRTGDLDLVKK-ALSALLKEHQFWNSG 43 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~-~~p~l~k~~~~w~~~ 43 (294)
++.+++.||+.|+|.+||++ .+|.|....+||.+.
T Consensus 432 ia~a~~~yy~~T~D~~fL~~~g~~~l~e~A~Fw~s~ 467 (754)
T 1h54_A 432 IAFAIYNYTRYTGDDSYVLHEGAKVLTEISRFWADR 467 (754)
T ss_dssp HHHHHHHHHHHHCCCTTTTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHhCChHHHHHHHHHHHHh
Confidence 56789999999999999985 699999999999865
No 25
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=87.68 E-value=1 Score=40.54 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=54.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCC-CCcHHHHHHHHHHHHHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLR-PESSTIMELDIASMAQI 87 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~pr-pes~~~~~~~lA~la~~ 87 (294)
.+.++..+|+.|+|.++++.+...+..-.+.+. ++.|. +...+.....+| ++.+..+...+..++++
T Consensus 120 ~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~---------d~~g~---~~~~~~~~~~~~~~~~~~~~~~all~l~~~ 187 (388)
T 2gz6_A 120 AAMAFSQYALASGEEWAKDVAMQAYNNVLRRKD---------NPKGK---YTKTYPGTRPMKALAVPMILANLTLEMEWL 187 (388)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC--------------------------CCCCEETHHHHHHHHHHHHTGGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhc---------CCCcc---cCcccCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 455666788999999888766555444433221 11221 111111111111 12222223344455555
Q ss_pred hCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEe
Q 047407 88 VGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLD 122 (294)
Q Consensus 88 lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D 122 (294)
.|+ ..|.++|+++.+.+.+.+++++.|.+..
T Consensus 188 t~d----~~~~~~A~~~~~~~~~~~~~~~~g~~~e 218 (388)
T 2gz6_A 188 LPQ----ETLENVLAATVQEVMGDFLDQEQGLMYE 218 (388)
T ss_dssp SCH----HHHHHHHHHHHHHHHHTTEETTTTEECS
T ss_pred cCC----HHHHHHHHHHHHHHHHHHhccCCCeEEE
Confidence 543 5799999999999999999999998643
No 26
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=87.41 E-value=3.7 Score=37.29 Aligned_cols=110 Identities=10% Similarity=0.052 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCc-cc-cccCCCCeeeceeeec--CCCCCCC--CcHHH---HHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHK-VN-IQEDHGRNHTLSRYYG--MWNKLRP--ESSTI---MEL 79 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~-~~-~~~~~G~~~~l~~y~~--~~~~prp--es~~~---~~~ 79 (294)
++.++..+++.|+|..+++++-..+.....-|....+. +. ..+.++. ....|.. +.+.-|| -++.+ ...
T Consensus 178 l~eall~L~~~tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~--~~~~~~~~~~~~~~~~~~~~pGH~iE~aw 255 (402)
T 3gt5_A 178 MCEAMLAAYEASGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWE--VDWDYNRDNPKHLFRPWGFQPGHQTEWAK 255 (402)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSC--BCTTTTTTSTTCSSSCSSBCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCC--CccccccCCcccccCcCCCCCChHHHHHH
Confidence 44557788899999998887776666555544433211 00 0011111 0000000 0011122 22322 334
Q ss_pred HHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeee
Q 047407 80 DIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYW 124 (294)
Q Consensus 80 ~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~ 124 (294)
.|.++++.+|++ .+.+.|.++.+.+.+..||++.|.+++..
T Consensus 256 lLl~~~~~~~~~----~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~ 296 (402)
T 3gt5_A 256 LLLILDRYIEVE----WLVPVARSLFDVAVARSWDAVRGGLCYGF 296 (402)
T ss_dssp HHHHHHHHCCCT----THHHHHHHHHHHHHHHHBCTTTCSBCSEE
T ss_pred HHHHHHHhhCcH----HHHHHHHHHHHHHHHhcccCCCCcEEEEE
Confidence 577788888864 38889999999999999999887776543
No 27
>2ww2_A Mannosidase, alpha-1,2-mannosidase; hydrolase, glycoside hydrolase family 92, BT2199; HET: SWA; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvy_A*
Probab=80.83 E-value=0.57 Score=46.37 Aligned_cols=43 Identities=19% Similarity=0.251 Sum_probs=36.2
Q ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeec
Q 047407 78 ELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWI 125 (294)
Q Consensus 78 ~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~ 125 (294)
.-+||+||+.||++++++.|.+||..-| .+||+++|++..++.
T Consensus 455 D~~iaq~Ak~LGk~~d~~~y~~Rs~ny~-----n~fd~~tgf~rpr~~ 497 (737)
T 2ww2_A 455 DWCIARFAESLGKQDIADQYYQKAPNYR-----NLYYPEHGFMWTKDA 497 (737)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHTTGGGGG-----GGEETTTTEECCBCT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhHH-----HhCCCccCcccccCC
Confidence 4579999999999999999999987764 489999998876653
No 28
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=80.27 E-value=9.1 Score=34.88 Aligned_cols=103 Identities=9% Similarity=0.022 Sum_probs=63.1
Q ss_pred HHHHHHHHHHc---CC--H-HHHHHHHHHHHHHHH-HHhhCCCccccccCCCCeeeceeeecCCCCCC--CC---cHHHH
Q 047407 10 SAMVYDIYNRT---GD--L-DLVKKALSALLKEHQ-FWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLR--PE---SSTIM 77 (294)
Q Consensus 10 ~~~v~~~y~~t---~D--~-~fL~~~~p~l~k~~~-~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~pr--pe---s~~~~ 77 (294)
++++.++++.+ +| . ++++.+........+ +|... ..| ++....+....|. +. ...++
T Consensus 253 ~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~--------~~G---G~~~~~~~~g~~~~~~k~~w~~aea 321 (421)
T 2zbl_A 253 GRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPD--------GAD---GFVYSVDWDGKPIVRERVRWPIVEA 321 (421)
T ss_dssp HHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBSCS--------SSS---SBCSCBCTTSCBSCCCEEHHHHHHH
T ss_pred HHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcCCC--------CCC---cEEEeecCCCCccCCCcccHHHHHH
Confidence 67788888887 55 4 666666555544444 23211 012 2221112122221 11 12334
Q ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCC
Q 047407 78 ELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISN 127 (294)
Q Consensus 78 ~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~ 127 (294)
...+..+++..|+. .|.+.|+++-+.+.+.|.|.+.|.|++.-...
T Consensus 322 ~~all~l~~~tgd~----~yl~~a~~~~~~~~~~~~d~~~G~w~~~l~~~ 367 (421)
T 2zbl_A 322 MGTAYALYTLTDDS----QYEEWYQKWWDYCIKYLMDYENGSWWQELDAD 367 (421)
T ss_dssp HHHHHHHHHHHCCH----HHHHHHHHHHHHHHHHTBCTTTSSBCSEECTT
T ss_pred HHHHHHHHHHhCCH----HHHHHHHHHHHHHHHhCCCCCCCeeEeeECcC
Confidence 55677888888864 58899999999999999999999999876544
No 29
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=80.19 E-value=2.8 Score=38.38 Aligned_cols=47 Identities=13% Similarity=0.064 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCc-hh-HHHHHHHHHHHHHHHHhhccccC--CCeEEeee
Q 047407 78 ELDIASMAQIVGDN-RT-AESFLKAAQARKQAINSVFWNKE--KGQWLDYW 124 (294)
Q Consensus 78 ~~~lA~la~~lG~~-~~-a~~~~~~A~~l~~ai~~~lWdee--~g~y~D~~ 124 (294)
...|.++++.+++. +. ...|.+.|.++.+.+.+.+||++ -|+|+..+
T Consensus 253 ~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~ 303 (421)
T 2zbl_A 253 GRLMLHLHAALEARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVD 303 (421)
T ss_dssp HHHHHHHHHHHHHTTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBC
T ss_pred HHHHHHHHHHcccccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeec
Confidence 44678888888421 11 12699999999999999999987 56666543
No 30
>2wvx_A Mannosidase, putative alpha-1,2-mannosidase; glycoside hydrolase family 92, GH92, hydrolase, BT3990; HET: MSE; 1.90A {Bacteroides thetaiotaomicron} PDB: 2wvz_A* 2ww0_A* 2ww1_A* 2ww3_A* 2wvx_B* 2wzs_A*
Probab=78.96 E-value=0.92 Score=44.91 Aligned_cols=43 Identities=19% Similarity=0.118 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHhhccccCCCeEEeeec
Q 047407 78 ELDIASMAQIVGD-NRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWI 125 (294)
Q Consensus 78 ~~~lA~la~~lG~-~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~ 125 (294)
.-+||+||+.||+ +++++.|.+||..-| .+||+++|++.-++.
T Consensus 452 D~~iaq~Ak~LGk~~~d~~~y~~Rs~nyr-----nlfd~~tgf~rpr~~ 495 (744)
T 2wvx_A 452 DWCIYRLAKELKRPKKEISLFAKRAMNYK-----NLFDKESKLMRGRNE 495 (744)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHHHTTGGG-----GGEETTTTEECCBCT
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHH-----HhCCCccCcccccCC
Confidence 4579999999999 999999999998774 489999998865543
No 31
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=78.65 E-value=6.7 Score=35.19 Aligned_cols=93 Identities=9% Similarity=0.099 Sum_probs=56.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCCCcHHH----HHHHHHHHH
Q 047407 10 SAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPESSTI----MELDIASMA 85 (294)
Q Consensus 10 ~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prpes~~~----~~~~lA~la 85 (294)
...+..+|+.|+|..+++. +.+..++..+..+ .++|. +|.....|. ..+.. +.-.|++++
T Consensus 93 g~~ll~lY~~Tgd~~yl~~----a~~la~~l~~~~r-----~~~G~------fw~~~~~~~-~~w~D~l~m~~p~L~~l~ 156 (373)
T 1nc5_A 93 GLILFPLYEQTKDERYVKA----AKRLRSLYGTLNR-----TSEGG------FWHKDGYPY-QMWLDGLYMGGPFALKYA 156 (373)
T ss_dssp GGGHHHHHHHHCCHHHHHH----HHHHHGGGGTSCB-----CTTSC------BCSCTTSTT-EEETHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHH----HHHHHHHHHhccC-----CCCCC------eeccCCCCC-eEEeCcHHHHHHHHHHHH
Confidence 3456678999999886654 3333343322211 23342 232211121 11211 234688999
Q ss_pred HHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEe
Q 047407 86 QIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLD 122 (294)
Q Consensus 86 ~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D 122 (294)
++.|+++ |.+.|.+....+.+.++|+++|.|+.
T Consensus 157 ~~tgd~~----y~d~A~~~~~~~~~~l~D~~tGl~~h 189 (373)
T 1nc5_A 157 NLKQETE----LFDQVVLQESLMRKHTKDAKTGLFYH 189 (373)
T ss_dssp HHHTCTH----HHHHHHHHHHHHHHHHBCTTTSCBCS
T ss_pred HHHCCHH----HHHHHHHHHHHHHHHhcCCCCCCEEe
Confidence 9999764 78888887788888899999999964
No 32
>2xsg_A Ccman5; hydrolase, mannosidase; HET: B3P; 2.00A {Cellulosimicrobium cellulans}
Probab=75.91 E-value=1.7 Score=43.21 Aligned_cols=42 Identities=14% Similarity=0.119 Sum_probs=33.8
Q ss_pred HHHHHHHHHHhCCchhHHHHHHHH-HHHHHHHHhhccccC---------CCeEEeee
Q 047407 78 ELDIASMAQIVGDNRTAESFLKAA-QARKQAINSVFWNKE---------KGQWLDYW 124 (294)
Q Consensus 78 ~~~lA~la~~lG~~~~a~~~~~~A-~~l~~ai~~~lWdee---------~g~y~D~~ 124 (294)
.-+||+||+.||++++++.|.+|| ..-+. +||++ +|++..++
T Consensus 465 D~~iaq~Ak~LGk~~d~~~y~~Rs~~ny~n-----lfd~~~~~~~~~~~tgf~~pr~ 516 (774)
T 2xsg_A 465 QYGLSVIADELGLTEEAETLREQASWPIEK-----LTKPGAWTAADGTQVGLLTPRA 516 (774)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-----HEEEEEEECTTCCEEEEECCBC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhHHH-----hCCchhccccccCccceeeecC
Confidence 347999999999999999999999 87754 78888 67665443
No 33
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=74.62 E-value=16 Score=33.19 Aligned_cols=91 Identities=11% Similarity=0.118 Sum_probs=52.9
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCC-----CCCCCCcH-HHHHHHHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMW-----NKLRPESS-TIMELDIA 82 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~-----~~prpes~-~~~~~~lA 82 (294)
++..+-.+|+.|+|.+||+.+- +-.+++.++- ..+| ..||+.. ..|++.|- .-+...|.
T Consensus 251 ~i~gl~~lY~~T~d~~yL~~A~----~la~~~l~~~------~~d~-----~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll 315 (397)
T 2zzr_A 251 GIYGIPLSYRKMKDYQQIILFK----GMTNYFLNRL------PEDK-----VSYWDLIFTDGSGQPRDTSATATAVCGIH 315 (397)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHH----HHHHHHHHTC------CTTS-----CCBSBTTCCTTSCCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHH----HHHHHHHHhh------HHhC-----CccccCCCCCCCCCcCCCCHHHHHHHHHH
Confidence 4556667799999999998773 3334444431 1122 1244321 12333221 11445677
Q ss_pred HHHHHhCCch-hHHHHHHHHHHHHHHHHhhccc
Q 047407 83 SMAQIVGDNR-TAESFLKAAQARKQAINSVFWN 114 (294)
Q Consensus 83 ~la~~lG~~~-~a~~~~~~A~~l~~ai~~~lWd 114 (294)
++++.+|+.. +.+.|++.|+++.+++......
T Consensus 316 ~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~ 348 (397)
T 2zzr_A 316 EMLKYLPEVDPDKETYKYAMHTMLRSLIEQYSN 348 (397)
T ss_dssp HHHTTSCTTCTTHHHHHHHHHHHHHHHHHHTBC
T ss_pred HHHHhcCccchhhHHHHHHHHHHHHHHHHHHhc
Confidence 8888887522 2233999999998888876543
No 34
>3qxf_A Endoglucanase; cellulase, GH8, cellulose synthesis, cellulose degradation,; 1.85A {Escherichia coli k-12} PDB: 3qxq_A*
Probab=74.28 E-value=19 Score=32.29 Aligned_cols=37 Identities=8% Similarity=0.052 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCC
Q 047407 78 ELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKG 118 (294)
Q Consensus 78 ~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g 118 (294)
+..|...++.-|+. .|.+.|..+.++|.+..-.+..|
T Consensus 101 A~ALl~A~~~Wg~~----~Y~~~A~~il~~I~~~~v~~~~g 137 (355)
T 3qxf_A 101 AWSLLEAGRLWKEQ----RYTDIGSALLKRIAREEVVTVPG 137 (355)
T ss_dssp HHHHHHHHHHTTCH----HHHHHHHHHHHHHHHHHEEEETT
T ss_pred HHHHHHHHHHhCCH----HHHHHHHHHHHHHHHhccccCCC
Confidence 34566667777875 59999999999998876554434
No 35
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=69.69 E-value=22 Score=32.07 Aligned_cols=93 Identities=15% Similarity=0.207 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCC-----CCCCCCcHH-HHHHHH
Q 047407 8 LLSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMW-----NKLRPESST-IMELDI 81 (294)
Q Consensus 8 ~~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~-----~~prpes~~-~~~~~l 81 (294)
+++..+-.+|+.|+|..+|+.+-.. .+++.+.- ..+| ..||+.. ..|+..|-. -+...|
T Consensus 225 w~i~gl~~ly~~T~d~~yL~~A~~l----a~~~l~~~------~~d~-----~pywd~~~~~~~~~~~d~Sa~aiaA~~L 289 (377)
T 2ahf_A 225 WGIYGFALNSRYLGNADLLETAKRM----ARHFLARV------PEDG-----VVYWDFEVPQEPSSYRDSSASAITACGL 289 (377)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHH----HHHHHTTC------CTTS-----SCBSBTTSCCCTTSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCChHHHHHHHHH----HHHHHHhh------HHhC-----CcccccCCCccCCCccCCCHHHHHHHHH
Confidence 3556667789999999998865543 34444331 1122 1244321 122221211 144567
Q ss_pred HHHHHHhC-CchhHHHHHHHHHHHHHHHHhhcccc
Q 047407 82 ASMAQIVG-DNRTAESFLKAAQARKQAINSVFWNK 115 (294)
Q Consensus 82 A~la~~lG-~~~~a~~~~~~A~~l~~ai~~~lWde 115 (294)
.++++.++ ...+.+.|++.|+++.+++.+.....
T Consensus 290 l~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~ 324 (377)
T 2ahf_A 290 LEIASQLDESDPERQRFIDAAKTTVTALRDGYAER 324 (377)
T ss_dssp HHHHHTSCTTCHHHHHHHHHHHHHHHHHHHHTBCC
T ss_pred HHHHHhcCccccchHHHHHHHHHHHHHHHHHHhcC
Confidence 88888886 23345679999999998887765443
No 36
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=64.76 E-value=18 Score=33.36 Aligned_cols=97 Identities=13% Similarity=0.126 Sum_probs=55.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCC-CcHHH---HH-HHHHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRP-ESSTI---ME-LDIAS 83 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prp-es~~~---~~-~~lA~ 83 (294)
+.+++...|+.|+|..+++ .+.+..+|.++.-- +.++| ++.+ . .+.| ..+.+ |. -.|++
T Consensus 150 ~~~~Li~lY~~T~d~~yl~----~a~~~ad~L~~~~p----Rt~~G---gf~h---~--~~~~~q~WiD~lyM~~pfla~ 213 (445)
T 3k11_A 150 VCTAMIKLRLKDESLPVDG----LIQNYFDFIINKEY----RLADG---TFAR---N--RPQRNTLWLDDMFMGIPAVAQ 213 (445)
T ss_dssp HHHHHHHHHHHCTTCCCHH----HHHHHHHHHHHTSC----BCTTC---CBCB---C--SSSTTEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCHHHHH----HHHHHHHHHHHcCC----CCCCC---ceee---c--CCCCCceEecchhhHHHHHHH
Confidence 3466668888899875444 44556665554321 12344 2322 1 1212 12222 22 36888
Q ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEee
Q 047407 84 MAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDY 123 (294)
Q Consensus 84 la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~ 123 (294)
++++.|+++. .|.+.|.+--....++++|+++|.|+.-
T Consensus 214 ~~~~tgd~~~--~y~d~A~~q~~~~~~~l~D~~tGL~~Hg 251 (445)
T 3k11_A 214 MSRYDKEAKN--KYLAEAVKQFLQFADRMFIPEKGLYRHG 251 (445)
T ss_dssp HHHHCGGGHH--HHHHHHHHHHHHHHHHHEETTTTEECSE
T ss_pred HHHHHCCcch--HHHHHHHHHHHHHHHhcccCCCCCEeee
Confidence 9999987641 2555555544556667999999999753
No 37
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=62.58 E-value=39 Score=31.17 Aligned_cols=42 Identities=7% Similarity=-0.089 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEe
Q 047407 77 MELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLD 122 (294)
Q Consensus 77 ~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D 122 (294)
+...|-.+++..++. .|++.|....+.|...++..+.|.|.-
T Consensus 150 ~~~~Li~lY~~T~d~----~yl~~a~~~ad~L~~~~pRt~~Ggf~h 191 (445)
T 3k11_A 150 VCTAMIKLRLKDESL----PVDGLIQNYFDFIINKEYRLADGTFAR 191 (445)
T ss_dssp HHHHHHHHHHHCTTC----CCHHHHHHHHHHHHHTSCBCTTCCBCB
T ss_pred HHHHHHHHHHhcCCH----HHHHHHHHHHHHHHHcCCCCCCCceee
Confidence 334566677766544 588889999999999999887887763
No 38
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=59.57 E-value=41 Score=30.20 Aligned_cols=99 Identities=15% Similarity=0.139 Sum_probs=56.8
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCC---------CCCc-----HHHHH
Q 047407 13 VYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKL---------RPES-----STIME 78 (294)
Q Consensus 13 v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~p---------rpes-----~~~~~ 78 (294)
+...++.++|.++++.+...+....+.... ++|.......|......+ .+.+ +....
T Consensus 157 L~~A~~~~gd~~y~~~A~~~a~~~l~~~~r---------~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i 227 (377)
T 2ahf_A 157 LLWAGEQTGDPEYRRVAEAHALKSRRFLVR---------GDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGI 227 (377)
T ss_dssp HHHHHHHHCCTHHHHHHHHHHHHHHHHTBB---------TTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhCcC---------CCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHH
Confidence 334457799999888777666666554321 122211111111111111 1111 12234
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCe-EEeeecC
Q 047407 79 LDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQ-WLDYWIS 126 (294)
Q Consensus 79 ~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~-y~D~~~~ 126 (294)
.-+..+++..|++ +|.+.|.++.+.+.++| ++.+. |+|.+..
T Consensus 228 ~gl~~ly~~T~d~----~yL~~A~~la~~~l~~~--~~d~~pywd~~~~ 270 (377)
T 2ahf_A 228 YGFALNSRYLGNA----DLLETAKRMARHFLARV--PEDGVVYWDFEVP 270 (377)
T ss_dssp HHHHHHHHHHTCH----HHHHHHHHHHHHHHTTC--CTTSSCBSBTTSC
T ss_pred HHHHHHHHHHCCh----HHHHHHHHHHHHHHHhh--HHhCCcccccCCC
Confidence 5677888888763 58999999999999988 55666 8877653
No 39
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=58.41 E-value=50 Score=29.89 Aligned_cols=99 Identities=12% Similarity=0.038 Sum_probs=56.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCC---------CCCc-H----HHHH
Q 047407 13 VYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKL---------RPES-S----TIME 78 (294)
Q Consensus 13 v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~p---------rpes-~----~~~~ 78 (294)
+...++.++|.++++.+...+....+.... ++|.......|......| .+.+ + ....
T Consensus 182 L~~A~~~~gd~~y~~~A~~ha~~~l~~~~r---------~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i 252 (397)
T 2zzr_A 182 LFFAYEQTGDEKYRQVAVNHFYASANNVVR---------DDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGI 252 (397)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHHHHTBC---------TTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhCcC---------CCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHH
Confidence 334467899999888766665555553221 123211112211111111 1111 1 2234
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCe-EEeeecC
Q 047407 79 LDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQ-WLDYWIS 126 (294)
Q Consensus 79 ~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~-y~D~~~~ 126 (294)
.-+..+++..|+. +|.+.|..+.+.+.++| ++.+. |+|.+..
T Consensus 253 ~gl~~lY~~T~d~----~yL~~A~~la~~~l~~~--~~d~~pywdt~~~ 295 (397)
T 2zzr_A 253 YGIPLSYRKMKDY----QQIILFKGMTNYFLNRL--PEDKVSYWDLIFT 295 (397)
T ss_dssp HHHHHHHHHHCCH----HHHHHHHHHHHHHHHTC--CTTSCCBSBTTCC
T ss_pred HHHHHHHHHHCCH----HHHHHHHHHHHHHHHhh--HHhCCccccCCCC
Confidence 4677888888864 48999999999999988 55565 8887654
No 40
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=58.39 E-value=17 Score=32.79 Aligned_cols=94 Identities=12% Similarity=0.199 Sum_probs=52.7
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCC-CcHHH---H-HHHHHHHHH
Q 047407 12 MVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRP-ESSTI---M-ELDIASMAQ 86 (294)
Q Consensus 12 ~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prp-es~~~---~-~~~lA~la~ 86 (294)
.+-.+|+.|+|..+++.+... .++.+...- +.++| ++.+. ..+.+.+ ..+.. | .-.|+++++
T Consensus 118 ~l~~lY~~Tgd~~Yl~~a~~~----ad~L~~~~~----r~~~G---gf~~~--~~~~~~~~~~WiDgl~M~~p~La~~~~ 184 (382)
T 3pmm_A 118 TLAYRFEETGRMAYLPWLESW----AEWAMHEMP----RTEQG---GMQHM--TLAEENHQQMWDDTLMMTVLPLAKIGK 184 (382)
T ss_dssp HHHHHHHHHCCGGGHHHHHHH----HHHHHHTSC----BCGGG---CBCCC--CSSCCCTTEEETTHHHHTHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHH----HHHHHhhCC----CCcCC---Ceeee--cCCCCCCCcEEecchhhhHHHHHHHHH
Confidence 446889999998877655443 333332210 01233 22211 1111222 11111 2 236789999
Q ss_pred HhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEe
Q 047407 87 IVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLD 122 (294)
Q Consensus 87 ~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D 122 (294)
+.|+++ |.+.|.+-.....+.++|+++|.|+.
T Consensus 185 ~tgd~~----y~d~A~~q~~~~~~~l~D~~tGl~~h 216 (382)
T 3pmm_A 185 LLNRPQ----YVEEATYQFLLHVQNLMDRETGLWFH 216 (382)
T ss_dssp HTTCHH----HHHHHHHHHHHHHHHHBCTTTSCBCS
T ss_pred HHCCHH----HHHHHHHHHHHHHHHccCCCCCCeee
Confidence 998754 66666655666667799999999875
No 41
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=56.27 E-value=61 Score=29.03 Aligned_cols=85 Identities=13% Similarity=-0.006 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCCCCCCcHHHHHHHHHHHHHH
Q 047407 8 LLSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNKLRPESSTIMELDIASMAQI 87 (294)
Q Consensus 8 ~~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~prpes~~~~~~~lA~la~~ 87 (294)
++.-+++.+|+.|||+.+++.+-. +.+-.... +|. +. ..+... ....+..+++.
T Consensus 72 ~~~~gl~~~ye~Tgd~~y~~~a~~----~~~~~~~~---------~~~---~~--n~D~~~--------~~~~l~~lY~~ 125 (382)
T 3pmm_A 72 VGLYGIYQYYQQTGDIEMRDIIDR----WFADRFAE---------GAT---TK--NVNTMA--------PFLTLAYRFEE 125 (382)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHH----HHHHHHHH---------CCC---CC--CTTTTT--------THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHH----HHHHHHcC---------CCC---cC--cccchH--------HHHHHHHHHHH
Confidence 456788899999999987765543 33311111 111 00 111111 12367889999
Q ss_pred hCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEe
Q 047407 88 VGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLD 122 (294)
Q Consensus 88 lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D 122 (294)
.|+++ |++.|..+.+.+.+.+++.+.|.|..
T Consensus 126 Tgd~~----Yl~~a~~~ad~L~~~~~r~~~Ggf~~ 156 (382)
T 3pmm_A 126 TGRMA----YLPWLESWAEWAMHEMPRTEQGGMQH 156 (382)
T ss_dssp HCCGG----GHHHHHHHHHHHHHTSCBCGGGCBCC
T ss_pred hCCHH----HHHHHHHHHHHHHhhCCCCcCCCeee
Confidence 99754 88888888888877788887777753
No 42
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=54.75 E-value=1.1e+02 Score=26.87 Aligned_cols=96 Identities=9% Similarity=0.049 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeec-CCCCCCC----CcHHH--HHHHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYG-MWNKLRP----ESSTI--MELDI 81 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~-~~~~prp----es~~~--~~~~l 81 (294)
++.++.++++.|+|..+++. .++.++|..++ . .|++|. +...-. ..++... -+|.. ...-+
T Consensus 155 ~~~~la~l~~~tgd~~Yl~~----A~~~~~w~~~~--l---~d~~g~---v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~ 222 (349)
T 3k7x_A 155 FIILSCWLYNELNETKYLEW----AMKTYEWQTKV--L---VREDGF---VEDGINRLEDGTIDYEWKFTYNQGVYIGAN 222 (349)
T ss_dssp HHHHHHHHHHHHCCHHHHHH----HHHHHHHHHHH--H---BCTTSC---BCCEECTTSSSCBCTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHH----HHHHHHHHHhc--C---CCCCCe---EecCCccCCCCccCCcCeeeHHHHHHHHHH
Confidence 44566688899999876653 45556654432 1 133332 111111 1111211 12322 33457
Q ss_pred HHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEe
Q 047407 82 ASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLD 122 (294)
Q Consensus 82 A~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D 122 (294)
+.|++..|+ +.|.++|.++.+.+.+.|+. .|..++
T Consensus 223 ~~LY~~T~d----~~yl~~a~~l~~~~~~~f~~--~gi~~~ 257 (349)
T 3k7x_A 223 LELYRITKE----AIYLDTANKTAAISLKELTE--DGIFKD 257 (349)
T ss_dssp HHHHHHHCC----HHHHHHHHHHHHHHHHHHEE--TTEECC
T ss_pred HHHHHhhCc----HHHHHHHHHHHHHHHHHhcc--CCcccC
Confidence 888888885 46999999999999888883 576653
No 43
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=40.92 E-value=1.4e+02 Score=26.45 Aligned_cols=40 Identities=10% Similarity=-0.077 Sum_probs=29.3
Q ss_pred HHHHHHHh---CCchhHHHHHHHHHHHHHHHHhhccccCC--CeEEeee
Q 047407 81 IASMAQIV---GDNRTAESFLKAAQARKQAINSVFWNKEK--GQWLDYW 124 (294)
Q Consensus 81 lA~la~~l---G~~~~a~~~~~~A~~l~~ai~~~lWdee~--g~y~D~~ 124 (294)
++..++.+ |+ ..|.+.|+...+.|.+.+||++. |+|+..+
T Consensus 65 ~a~a~~~~~~~~~----~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d 109 (402)
T 1fp3_A 65 YCRLYRKLERFHR----PELLDAAKAGGEFLLRHARVAPPEKKCAFVLT 109 (402)
T ss_dssp HHHHHHHCGGGCC----HHHHHHHHHHHHHHHHHTBSSTTSCCBCSEEC
T ss_pred HHHHHHHhcccCC----HHHHHHHHHHHHHHHHhccCcCCCCceEEEEC
Confidence 44445555 54 46899999999999999999886 5665444
No 44
>2vh3_A Ranasmurfin, RSF-1; LTQ, bisltq, unknown function; HET: DAH TY2; 1.16A {Polypedates leucomystax} PDB: 2vh3_B*
Probab=30.91 E-value=78 Score=21.74 Aligned_cols=32 Identities=19% Similarity=0.238 Sum_probs=27.3
Q ss_pred HHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Q 047407 79 LDIASMAQIVGDNRTAESFLKAAQARKQAINS 110 (294)
Q Consensus 79 ~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~ 110 (294)
+.-|.+...|+.+++|+.|++.|+..-.++.-
T Consensus 31 ksyalicaylnykedaenyeraaedfdsavkc 62 (113)
T 2vh3_A 31 KSYALICAYLNYKEDAENYERAAEDFDSAVKC 62 (113)
T ss_dssp HHHHHHHHHHTGGGCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHhcchhhHHHHHHHHHHhhhhhcc
Confidence 45677888999999999999999998887764
No 45
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=26.56 E-value=3.9e+02 Score=25.44 Aligned_cols=103 Identities=10% Similarity=0.021 Sum_probs=58.2
Q ss_pred CCCcchHHHHHHHHHHHcCCH----H-HHHHHHHHHHHHHHHHhhCCCccccccCCCC-eeeceeeecCCCCCC------
Q 047407 3 CSQPPLLSAMVYDIYNRTGDL----D-LVKKALSALLKEHQFWNSGIHKVNIQEDHGR-NHTLSRYYGMWNKLR------ 70 (294)
Q Consensus 3 rsqPP~~~~~v~~~y~~t~D~----~-fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~-~~~l~~y~~~~~~pr------ 70 (294)
=-|-++++|.+...|+..++. + -+.+++..++=..+|+++.+. ++|. .+.+..-|.....+|
T Consensus 161 pqQ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~------~~g~~y~qVgd~W~~d~~~R~~~~~~ 234 (586)
T 3h7l_A 161 PQQTPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQN------EKGFFYMTVFDKWSKDTAQREICAYE 234 (586)
T ss_dssp CCCHHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBC------TTSCBBCEEECTTCCCGGGCEEEEEE
T ss_pred cchhhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhccc------CCCeEEEEecCCCCCCCCcccccccc
Confidence 346789999999999986542 2 266777777777788887654 2332 111211122111122
Q ss_pred -CC-----cH--------HHHHHHHHHHHHHhCCchh-HHHHHHHHHHHHHHHHhh
Q 047407 71 -PE-----SS--------TIMELDIASMAQIVGDNRT-AESFLKAAQARKQAINSV 111 (294)
Q Consensus 71 -pe-----s~--------~~~~~~lA~la~~lG~~~~-a~~~~~~A~~l~~ai~~~ 111 (294)
|+ .| ..+...||..+++.-+.+- +++|.+.|++.-+-+.+.
T Consensus 235 ~~~~~~~~~y~~~~~~~agl~aAALA~Asrvf~d~~~~a~~~L~aA~~a~~fa~~~ 290 (586)
T 3h7l_A 235 TQLGHKFDDYQAGFRQGGGVAIAALAAASRLGVHGEYDQQKYRNAAENGYWHLKEH 290 (586)
T ss_dssp TTTTEEESCCBCCGGGTHHHHHHHHHHHTTSSSCSSSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcceecCCCCcHHHHHHHHHHHhcccCCCCcChHHHHHHHHHHHHHHHhc
Confidence 10 11 1133445555555333333 788999999888777765
No 46
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=24.16 E-value=2.1e+02 Score=27.27 Aligned_cols=23 Identities=4% Similarity=0.104 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHH
Q 047407 9 LSAMVYDIYNRTGDLDLVKKALS 31 (294)
Q Consensus 9 ~~~~v~~~y~~t~D~~fL~~~~p 31 (294)
+.|++..+|+.|+|..+|+.+..
T Consensus 308 ~~WAA~eLy~ATgd~~YL~~a~~ 330 (586)
T 3h7l_A 308 ALLASVELFKATKETRYLEESRL 330 (586)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 47889999999999999987754
No 47
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=23.19 E-value=3.8e+02 Score=23.43 Aligned_cols=101 Identities=13% Similarity=0.134 Sum_probs=55.3
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhCCCccccccCCCCeeeceeeecCCCC--------CCCCcHHH-H---H
Q 047407 11 AMVYDIYNRTGDLDLVKKALSALLKEHQFWNSGIHKVNIQEDHGRNHTLSRYYGMWNK--------LRPESSTI-M---E 78 (294)
Q Consensus 11 ~~v~~~y~~t~D~~fL~~~~p~l~k~~~~w~~~r~~~~~~~~~G~~~~l~~y~~~~~~--------prpes~~~-~---~ 78 (294)
..+..+++.|+|.++++.+...+....+..... .+|... ..|...... -.+..+.. + .
T Consensus 150 p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~--------~tGl~~--h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~ 219 (373)
T 1nc5_A 150 PFALKYANLKQETELFDQVVLQESLMRKHTKDA--------KTGLFY--HAWDEAKKMPWANEETGCSPEFWARSIGWYV 219 (373)
T ss_dssp HHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT--------TTSCBC--SEEETTCCSTTSCTTTCBCSCCBHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC--------CCCCEE--eecCCccccccccccCCCCCCcccchHhHHH
Confidence 344567788999999887777666655543221 234210 111111111 11222222 2 2
Q ss_pred HHHHHHHHHhCC-chhHHHHHHHHHHHHHHHHhhccccCCCeEEe
Q 047407 79 LDIASMAQIVGD-NRTAESFLKAAQARKQAINSVFWNKEKGQWLD 122 (294)
Q Consensus 79 ~~lA~la~~lG~-~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D 122 (294)
..|+.+.+.+-. ....++|.+.++++.+++.++. ++++|.|..
T Consensus 220 ~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q-~~~dG~W~~ 263 (373)
T 1nc5_A 220 MSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQ-DKETGLWYQ 263 (373)
T ss_dssp HHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTS-CTTTSCCBS
T ss_pred HHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhc-CCCCCceee
Confidence 234444444422 2345678999999999988865 677898763
No 48
>1efd_N Ferrichrome-binding periplasmic protein; periplasmic binding protein-siderophore complex, FHUD complex with gallichrome; HET: GCR; 1.90A {Escherichia coli} SCOP: c.92.2.1 PDB: 1k7s_N* 1k2v_N* 1esz_A*
Probab=21.99 E-value=1.5e+02 Score=24.32 Aligned_cols=41 Identities=15% Similarity=0.250 Sum_probs=30.1
Q ss_pred CcHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Q 047407 72 ESSTIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVF 112 (294)
Q Consensus 72 es~~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~l 112 (294)
.++......+..+++++|++++|+++-+..++..+.+.+..
T Consensus 99 ~~~~~~~~~i~~lg~~~g~~~~A~~~~~~~~~~~~~i~~~~ 139 (266)
T 1efd_N 99 QPLAMARKSLTEMADLLNLQSAAETHLAQYEDFIRSMKPRF 139 (266)
T ss_dssp CHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHGGGG
T ss_pred chHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444456788899999999999888777777666666544
No 49
>1gai_A Glucoamylase-471; hydrolase, glycosidase, polysaccharide degradation, glycoPro; HET: MAN NAG BMA GAC; 1.70A {Aspergillus awamori} SCOP: a.102.1.1 PDB: 1gah_A* 3gly_A* 1dog_A* 1glm_A* 1agm_A* 3eqa_A*
Probab=21.22 E-value=1.9e+02 Score=26.76 Aligned_cols=81 Identities=14% Similarity=0.343 Sum_probs=49.5
Q ss_pred HHHHHHHhhhcCcc----cccccccccCCCCCCCCCCCCCchHHHHHHHHHH---hcCcHHHHHHHHHHHHHHHHHHHHH
Q 047407 166 VEKVKKSFQSSGFL----GAAGIATSLTRSREQWDFPNGWAPLQHMIVEGLA---KSGLQEAKSMAQDIAMRWINTNYVA 238 (294)
Q Consensus 166 ~~~~~~~l~~~~~~----~~~Gi~ts~~~~~~~W~gPnvW~~~~~l~~~gL~---~yg~~~~~~~A~~la~~~~~~~~~~ 238 (294)
.+++++++...+-. .+|+|-.+.. ...||+-.+|+=...+++.+|. +.|+.+ +++++. +|+......
T Consensus 15 ~~~~l~ni~~~G~~~~~~~tGaiIASpt--tsnpDYrY~W~RDaa~t~~aL~~~~~~G~~~---~a~~~~-~~l~~~~~l 88 (472)
T 1gai_A 15 RTAILNNIGADGAWVSGADSGIVVASPS--TDNPDYFYTWTRDSGLVIKTLVDLFRNGDTD---LLSTIE-HYISSQAII 88 (472)
T ss_dssp HHHHHHTBTTTCTTCTTCCTTCBCSCSC--BSSSBCCSEEHHHHHHHHHHHHHHHHTTCGG---GHHHHH-HHHHHHHHH
T ss_pred HHHHHHhcCCCcccCCCCCCceEEeeCC--CCCCCCeEEchhhHHHHHHHHHHHHhcCCHH---HHHHHH-HHHHHHHHh
Confidence 35566666533321 2344432221 1357888899999999999998 889874 555544 666543211
Q ss_pred ---HhhcCccc------eeeccc
Q 047407 239 ---YKETGAMH------EKYDVE 252 (294)
Q Consensus 239 ---~~~~g~~~------E~Y~~~ 252 (294)
-..+|.+. -+|++.
T Consensus 89 Q~~~~~~G~l~~~glgE~~y~vd 111 (472)
T 1gai_A 89 QGVSNPSGDLSSGGLGEPKFNVD 111 (472)
T ss_dssp HHCCBTTBCTTTTGGGCCEECTT
T ss_pred hcccCCCCccccCCCCCceEccC
Confidence 12357777 788885
No 50
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=20.84 E-value=5.1e+02 Score=24.06 Aligned_cols=159 Identities=11% Similarity=0.067 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccccCCCeEEeeecCCCccc-----chhhhccCCCCcccee--hh
Q 047407 77 MELDIASMAQIVGDNRTAESFLKAAQARKQAINSVFWNKEKGQWLDYWISNRTSS-----QECQRWKGSNQSNNAF--TS 149 (294)
Q Consensus 77 ~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~lWdee~g~y~D~~~~~~~~~-----~~~~~~~~~~~~~~~~--~s 149 (294)
+..++-.|++.+|..+ ++..+++-.--.+.-+.-||++++.+....-+..+-+ ...|.-+.|.....+- ..
T Consensus 300 n~La~l~l~~~~~~~d--~~~l~W~i~gLka~~~yAYd~~~N~~~Pm~~dG~dltgy~l~RdGYYG~KGtvl~~~p~~~~ 377 (543)
T 2v8i_A 300 NALMQLQLGKDLGPQG--QDLLKWTVDGLKAFAKYAYNDQDNTFRPMIANGQDLSNYTLPRDGYYGKKGTVLKPYKAGNE 377 (543)
T ss_dssp HHHHHHHHHHHHGGGG--HHHHHHHHHHHHHHHHHHEETTTTEECCEETTSCBCTTEECSSCBTTBCTTCEECCEECCHH
T ss_pred CHHHHHHHHHHhcCch--HHHHHHHHHHHHHHHHHhhccCCCceeecccCCcCCcCcccccccccCCCCCeeccccCCch
Confidence 3345666777765432 4567777777788888899999998876553322111 1122222233222111 34
Q ss_pred hhHHHhccCC-CCchH---HHHHHHHHhhhcCcccccc-cccccCCCCCCCCCCCCCchHHHHHHHHHHhcCcHHHHHHH
Q 047407 150 NFVPIWIDLF-NSNTC---IVEKVKKSFQSSGFLGAAG-IATSLTRSREQWDFPNGWAPLQHMIVEGLAKSGLQEAKSMA 224 (294)
Q Consensus 150 ~~~PL~~g~~-~~~~~---~~~~~~~~l~~~~~~~~~G-i~ts~~~~~~~W~gPnvW~~~~~l~~~gL~~yg~~~~~~~A 224 (294)
-|+|+...-. +++.. .+..+.+.+.-.++-.++| .++-.. +.+|.-|-+-+-+++=-+..+...-.++|
T Consensus 378 yll~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~~~~~~~~~~~------~~~~~sp~lL~allEL~~atq~~~~l~lA 451 (543)
T 2v8i_A 378 FLISYARAYAIDNDPLLWKVARGIANDQGLGDIGTAPGKEVKVNM------DTTNSDPYALFALLDLYHASQVADYRKLA 451 (543)
T ss_dssp HHHHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTTBTTBSCEECT------TCCCCCHHHHHHHHHHHHHHCCHHHHHHH
T ss_pred hhHHHHHHHHcCCCHHHHHHHHHHHhhCCccccCCCcCccccccc------CCCCcCHHHHHHHHHHHHHhCCHHHHHHH
Confidence 5788776543 33432 2233333332111222222 222111 12344454444455544555655555789
Q ss_pred HHHHHHHHHHHHHHHhhcCccce
Q 047407 225 QDIAMRWINTNYVAYKETGAMHE 247 (294)
Q Consensus 225 ~~la~~~~~~~~~~~~~~g~~~E 247 (294)
.+|+++.++..+ ..|.|.+
T Consensus 452 ~~~g~nl~~~~~----~~G~Fv~ 470 (543)
T 2v8i_A 452 EKIGDNIIKIRY----IDGFFMA 470 (543)
T ss_dssp HHHHHHHHHHHE----ETTEECS
T ss_pred HHHHHHHHHHhh----cCceecC
Confidence 999988886543 4565544
No 51
>3lhs_A Ferrichrome ABC transporter lipoprotein; siderophore, iron, receptor, binding protein, T protein; HET: SF8; 1.30A {Staphylococcus aureus subsp} PDB: 3eiw_A 3eix_A* 3li2_A*
Probab=20.65 E-value=1.7e+02 Score=24.42 Aligned_cols=41 Identities=7% Similarity=0.023 Sum_probs=30.2
Q ss_pred CcHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Q 047407 72 ESSTIMELDIASMAQIVGDNRTAESFLKAAQARKQAINSVF 112 (294)
Q Consensus 72 es~~~~~~~lA~la~~lG~~~~a~~~~~~A~~l~~ai~~~l 112 (294)
.++.+....+..+++++|+.++|+++-+..+...+.+.+.+
T Consensus 117 ~~~~~~~~~i~~lg~~~g~~~~A~~~~~~~~~~~~~~~~~~ 157 (296)
T 3lhs_A 117 GDYKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEI 157 (296)
T ss_dssp CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 35555556777899999999999888777776666666654
Done!